http://togogenome.org/gene/4081:APS-AA2 ^@ http://purl.uniprot.org/uniprot/Q84VT8 ^@ 16668360 ^@ Plant Physiol|||Plant Physiol. ^@ Acid phosphatase-1 from nematode resistant tomato : isolation and characterization of its gene. ^@ Colwell G.|||Williamson V.M.
http://togogenome.org/gene/4081:LOC101260642 ^@ http://purl.uniprot.org/uniprot/P35057 ^@ 7764315 ^@ Planta ^@ The pattern of histone H4 expression in the tomato shoot apex changes during development. ^@ Brandstaedter J.U.|||Rossbach C.|||Thers K.
http://togogenome.org/gene/4081:LOC101254197 ^@ http://purl.uniprot.org/uniprot/Q6LB28 ^@ 21900168 ^@ J Virol|||J. Virol. ^@ Histone H3 interacts and colocalizes with the nuclear shuttle protein and the movement protein of a geminivirus.|||Histone h3 interacts and colocalizes with the nuclear shuttle protein and the movement protein of a geminivirus. ^@ Gilbertson R.L.|||Lucas W.J.|||Park M.R.|||Rojas M.R.|||Seo Y.S.|||Zhou Y.
http://togogenome.org/gene/4081:MSRA ^@ http://purl.uniprot.org/uniprot/P54153 ^@ 2562553 ^@ Plant Cell ^@ Interaction of a developmentally regulated DNA-binding factor with sites flanking two different fruit-ripening genes from tomato. ^@ Cordes S.|||Deikman J.|||Fischer R.L.|||Margossian L.J.
http://togogenome.org/gene/4081:TIP ^@ http://purl.uniprot.org/uniprot/K4C6Q6 ^@ 24260152 ^@ PLoS ONE|||PLoS One ^@ Genome-wide identification and expression analysis of aquaporins in tomato. ^@ Akiyama M.|||Aoki K.|||Mori C.|||Reuscher S.|||Shibata D.|||Shiratake K.
http://togogenome.org/gene/4081:tft4 ^@ http://purl.uniprot.org/uniprot/P42652 ^@ 10198082|||7632735 ^@ Biochim. Biophys. Acta|||Plant Physiol. ^@ Fusicoccin, 14-3-3 proteins, and defense responses in tomato plants.|||Two cDNA clones encoding 14-3-3 homologs from tomato fruit. ^@ Bowles D.J.|||Ferl R.J.|||Laughner B.|||Lawrence S.D.|||Roberts M.R.
http://togogenome.org/gene/4081:LOC544153 ^@ http://purl.uniprot.org/uniprot/P37216 ^@ 7902741 ^@ Plant Mol. Biol. ^@ Differential expression of tomato (Lycopersicon esculentum L.) genes encoding shikimate pathway isoenzymes. I. 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase. ^@ Amrhein N.|||Beck A.|||Goerlach J.|||Handa A.K.|||Henstrand J.M.|||Herrmann K.M.|||Schmid J.
http://togogenome.org/gene/4081:LOC101248254 ^@ http://purl.uniprot.org/uniprot/P27057 ^@ 1302047 ^@ Plant J. ^@ Characterization of a shoot-specific, GA3- and ABA-regulated gene from tomato. ^@ Gast R.T.|||Gopalraj M.|||Olszewski N.E.|||Shi L.
http://togogenome.org/gene/4081:LOC101055545 ^@ http://purl.uniprot.org/uniprot/G9HPW0 ^@ 22368074 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ Genome-Wide Identification, Functional Analysis and Expression Profiling of the Aux/IAA Gene Family in Tomato.|||Genome-wide identification, functional analysis and expression profiling of the Aux/IAA gene family in tomato. ^@ Audran-Delalande C.|||Bassa C.|||Bouzayen M.|||Mila I.|||Regad F.|||Zouine M.
http://togogenome.org/gene/4081:LOXB ^@ http://purl.uniprot.org/uniprot/Q42873 ^@ 7724686 ^@ Plant Physiol|||Plant Physiol. ^@ Molecular cloning and nucleotide sequence of a lipoxygenase cDNA from ripening tomato fruit. ^@ Handa A.K.|||Kausch K.D.
http://togogenome.org/gene/4081:SlCKX7 ^@ http://purl.uniprot.org/uniprot/I0IUR0 ^@ 22865911 ^@ J Exp Bot|||J. Exp. Bot. ^@ Roles and regulation of cytokinins in tomato fruit development. ^@ Fukuda M.|||Honda I.|||Imanishi S.|||Kikuchi K.|||Matsuo S.
http://togogenome.org/gene/4081:THT1-3 ^@ http://purl.uniprot.org/uniprot/Q8RXB8 ^@ 12900412 ^@ J Biol Chem|||J. Biol. Chem. ^@ p-Coumaroylnoradrenaline, a novel plant metabolite implicated in tomato defense against pathogens. ^@ Daniels M.J.|||Dow J.M.|||Hammond-Kosack K.E.|||Jones J.D.|||Lahaye T.|||Newman M.-A.|||Newman M.A.|||Schornack S.|||Von Roepenack-Lahaye E.|||von Roepenack-Lahaye E.
http://togogenome.org/gene/4081:LyesC2p084 ^@ http://purl.uniprot.org/uniprot/A0A0C5CHA6|||http://purl.uniprot.org/uniprot/Q2MIB5 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LOC544313 ^@ http://purl.uniprot.org/uniprot/B1Q3F0 ^@ 18713763 ^@ Plant Cell Physiol. ^@ Biochemical mechanism on GABA accumulation during fruit development in tomato. ^@ Akama K.|||Akihiro T.|||Aoki K.|||Ashihara H.|||Ezura H.|||Fujimura T.|||Iijima Y.|||Koike S.|||Matsukura C.|||Shibata D.|||Tani R.|||Tominaga T.|||Watanabe S.
http://togogenome.org/gene/4081:SPA ^@ http://purl.uniprot.org/uniprot/K4BVL1 ^@ 24372694 ^@ Plant J. ^@ Silencing of the tomato sugar partitioning affecting protein (SPA) modifies sink strength through a shift in leaf sugar metabolism. ^@ Almeida J.|||Asis R.|||Baldet P.|||Bermudez L.|||Carrari F.|||Demarco D.|||Fernie A.R.|||Gibon Y.|||Osorio S.|||Quadrana L.|||Rossi M.|||de Godoy F.
http://togogenome.org/gene/4081:LOC544001 ^@ http://purl.uniprot.org/uniprot/Q40129 ^@ 7647301 ^@ Plant Mol. Biol. ^@ Nature and regulation of pistil-expressed genes in tomato. ^@ Gasser C.S.|||Milligan S.B.
http://togogenome.org/gene/4081:LOC543501 ^@ http://purl.uniprot.org/uniprot/O48645 ^@ 9426616 ^@ Plant Mol Biol|||Plant Mol. Biol. ^@ A novel gene of tomato preferentially expressed in fruit encodes a protein with a Ca2+-dependent lipid-binding domain. ^@ Kiyosue T.|||Ryan C.A.
http://togogenome.org/gene/4081:hsc70.3 ^@ http://purl.uniprot.org/uniprot/H1ZXA9 ^@ 21884738 ^@ Virus Res|||Virus Res. ^@ Pepino mosaic virus capsid protein interacts with a tomato heat shock protein cognate 70. ^@ Canto T.|||Ghita M.|||Livieratos I.C.|||Makris A.M.|||Mathioudakis M.M.|||Medina V.|||Tsikou D.|||Veiga R.
http://togogenome.org/gene/4081:HXK3 ^@ http://purl.uniprot.org/uniprot/Q4PS97 ^@ 16761134 ^@ Planta ^@ Two newly identified membrane-associated and plastidic tomato HXKs: characteristics, predicted structure and intracellular localization. ^@ Adir N.|||Belausov E.|||Damari-Weissler H.|||German M.A.|||Gidoni D.|||Granot D.|||Kandel-Kfir M.|||Mett A.|||Petreikov M.
http://togogenome.org/gene/4081:LOC101055581 ^@ http://purl.uniprot.org/uniprot/I2E5L8 ^@ 22573803 ^@ Plant Physiol|||Plant Physiol. ^@ The beta-Subunit of the SnRK1 Complex Is Phosphorylated by the Plant Cell Death Suppressor Adi3.|||The beta-subunit of the SnRK1 complex is phosphorylated by the plant cell death suppressor Adi3. ^@ Avila J.|||Chen S.|||Deeter T.A.|||Devarenne T.P.|||Gregory O.G.|||Martin G.B.|||Silva-Sanchez C.|||Su D.|||Xu S.
http://togogenome.org/gene/4081:SlArf/Xyl3 ^@ http://purl.uniprot.org/uniprot/H1AC32 ^@ 23782392 ^@ Physiol Plant|||Physiol. Plantarum ^@ Heterologous expression of tomato glycoside hydrolase family 3 ?-L-arabinofuranosidase/?-xylosidases in tobacco suspension cultured cells and synergic action of a family 51 isozyme under antisense suppression of the enzyme.|||Heterologous expression of tomato glycoside hydrolase family 3 alpha-L-arabinofuranosidase/beta-xylosidases in tobacco suspension cultured cells and synergic action of a family 51 isozyme under antisense suppression of the enzyme. ^@ Inoue H.|||Kamiyoshihara Y.|||Kanayama Y.|||Matsuno J.|||Miyohashi F.|||Nomura K.|||Shiba H.|||Tateishi A.|||Watanabe K.
http://togogenome.org/gene/4081:TomloxC ^@ http://purl.uniprot.org/uniprot/Q96573 ^@ 9232884 ^@ Plant Physiol|||Plant Physiol. ^@ A gene encoding a chloroplast-targeted lipoxygenase in tomato leaves is transiently induced by wounding, systemin, and methyl jasmonate. ^@ Bergey D.R.|||Heitz T.|||Ryan C.A.
http://togogenome.org/gene/4081:LOC100191114 ^@ http://purl.uniprot.org/uniprot/B2XVS2 ^@ 18458331 ^@ Proc Natl Acad Sci U S A|||Proc. Natl. Acad. Sci. U.S.A. ^@ COI1 is a critical component of a receptor for jasmonate and the bacterial virulence factor coronatine. ^@ He S.Y.|||Howe G.A.|||Katsir L.|||Schilmiller A.L.|||Staswick P.E.
http://togogenome.org/gene/4081:APX1 ^@ http://purl.uniprot.org/uniprot/Q3I5C4 ^@ 18026995 ^@ Mol Genet Genomics|||Mol. Genet. Genomics ^@ Ascorbate peroxidase gene family in tomato: its identification and characterization. ^@ Barriah W.|||Guy M.|||Janda T.|||Kayam G.|||Najami N.|||Tal M.|||Volokita M.
http://togogenome.org/gene/4081:LOC101247920 ^@ http://purl.uniprot.org/uniprot/K4C1Y1 ^@ 26248665 ^@ J Exp Bot|||J. Exp. Bot. ^@ L-type lectin receptor kinases in Nicotiana benthamiana and tomato and their role in Phytophthora resistance. ^@ Bouwmeester K.|||Govers F.|||Wang Y.|||Weide R.
http://togogenome.org/gene/4081:ARF16 ^@ http://purl.uniprot.org/uniprot/D9IVB4 ^@ 21735233 ^@ Plant Cell Rep. ^@ Identification, isolation and expression analysis of auxin response factor (ARF) genes in Solanum lycopersicum. ^@ Cheng L.|||Kong F.|||Liu S.|||Lu G.|||Peng Z.|||Wang F.|||Wu J.|||Yu X.
http://togogenome.org/gene/4081:LOC101248886 ^@ http://purl.uniprot.org/uniprot/K4C7H6 ^@ 24416299 ^@ PLoS ONE ^@ Slow co-evolution of the MAGO and Y14 protein families is required for the maintenance of their obligate heterodimerization mode. ^@ Gong P.|||He C.|||Zhao M.
http://togogenome.org/gene/4081:GP1 ^@ http://purl.uniprot.org/uniprot/Q40161 ^@ 12232274|||12232422|||1392611|||6489331|||7827495 ^@ Eur. J. Biochem.|||Plant Cell|||Plant Physiol. ^@ Differential expression of the two subunits of tomato polygalacturonase isoenzyme 1 in wild-type and in tomato fruit.|||Purification and characterization of tomato polygalacturonase converter.|||Reduction of tomato polygalacturonase beta subunit expression affects pectin solubilization and degradation during fruit ripening.|||The beta subunit of tomato fruit polygalacturonase isoenzyme 1: isolation, characterization, and identification of unique structural features.|||Tomato fruit polygalacturonase isozyme 1 -- characterization of the beta subunit and its state of assembly in vivo. ^@ Bennett A.B.|||DellaPenna D.|||Heupel R.C.|||Moore T.|||Pressey R.|||Watson C.F.|||Zheng L.
http://togogenome.org/gene/4081:LyesC2p053 ^@ http://purl.uniprot.org/uniprot/A0A0C5C9U3|||http://purl.uniprot.org/uniprot/Q3SC83 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LOC101262930 ^@ http://purl.uniprot.org/uniprot/B1N680 ^@ 18339939 ^@ Science ^@ A retrotransposon-mediated gene duplication underlies morphological variation of tomato fruit. ^@ Jiang N.|||Schaffner E.|||Stockinger E.J.|||Xiao H.|||van der Knaap E.
http://togogenome.org/gene/4081:LOC101267635 ^@ http://purl.uniprot.org/uniprot/Q9ZS79 ^@ 10318973|||9926411 ^@ Mol Plant Microbe Interact|||Mol. Plant Microbe Interact.|||Proc Natl Acad Sci U S A|||Proc. Natl. Acad. Sci. U.S.A. ^@ Homologues of the Cf-9 disease resistance gene (Hcr9s) are present at multiple loci on the short arm of tomato chromosome 1.|||Recombination between diverged clusters of the tomato Cf-9 plant disease resistance gene family. ^@ Bonnema G.|||Jones D.A.|||Jones J.D.|||Parniske M.|||Thomas C.M.|||Wulff B.B.
http://togogenome.org/gene/4081:LOC100191119 ^@ http://purl.uniprot.org/uniprot/B2YHW0 ^@ 18469814 ^@ Nat Genet|||Nat. Genet. ^@ Regulatory change in YABBY-like transcription factor led to evolution of extreme fruit size during tomato domestication. ^@ Barrero L.S.|||Cong B.|||Tanksley S.D.
http://togogenome.org/gene/4081:ETR3 ^@ http://purl.uniprot.org/uniprot/Q41341 ^@ 8525371 ^@ Science ^@ An ethylene-inducible component of signal transduction encoded by never-ripe. ^@ Giovannoni J.J.|||Klee H.J.|||Lanahan M.B.|||Wilkinson J.Q.|||Yen H.C.
http://togogenome.org/gene/4081:LysRS ^@ http://purl.uniprot.org/uniprot/Q43776 ^@ 9118995 ^@ Eur. J. Biochem. ^@ A root-specific iron-regulated gene of tomato encodes a lysyl-tRNA-synthetase-like protein. ^@ Balzer H.-J.|||Baumlein H.|||Ganal M.|||Giritch A.|||Herbik A.|||Stephan U.W.
http://togogenome.org/gene/4081:ER1 ^@ http://purl.uniprot.org/uniprot/P20076 ^@ 2903499 ^@ Proc. Natl. Acad. Sci. U.S.A. ^@ Ethylene-regulated expression of a tomato fruit ripening gene encoding a proteinase inhibitor I with a glutamic residue at the reactive site. ^@ Federman A.D.|||Fischer R.L.|||Giovannoni J.J.|||Margossian L.J.
http://togogenome.org/gene/4081:GGH3 ^@ http://purl.uniprot.org/uniprot/B2Z9Y4 ^@ 18757550 ^@ Plant Physiol|||Plant Physiol. ^@ Tomato gamma-glutamylhydrolases: expression, characterization, and evidence for heterodimer formation. ^@ Akhtar T.A.|||Giovannoni J.J.|||Gregory J.F.|||Gregory J.F.III.|||Hanson A.D.|||McQuinn R.P.|||Naponelli V.
http://togogenome.org/gene/4081:SlWRKY2 ^@ http://purl.uniprot.org/uniprot/Q9ARC7 ^@ 11283350 ^@ Plant Cell ^@ Comparative sequence analysis reveals extensive microcolinearity in the lateral suppressor regions of the tomato, Arabidopsis, and Capsella genomes. ^@ Acarkan A.|||Herrero R.|||Rossberg M.|||Schmidt R.|||Schmitt T.|||Schmitz G.|||Schumacher K.|||Theres K.
http://togogenome.org/gene/4081:LOC100736541 ^@ http://purl.uniprot.org/uniprot/F8SS66 ^@ 22211518 ^@ Plant J|||Plant J. ^@ Evaluating auxin distribution in tomato (Solanum lycopersicum) through an analysis of the PIN and AUX/LAX gene families. ^@ Catala C.|||Pattison R.J.
http://togogenome.org/gene/4081:RdRP ^@ http://purl.uniprot.org/uniprot/Q9ZR58 ^@ 9836747 ^@ Plant Cell ^@ Isolation of an RNA-directed RNA polymerase-specific cDNA clone from tomato. ^@ Kempe D.|||Lottspeich F.|||Pelissier T.|||Riedel L.|||Saenger H.L.|||Schiebel R.|||Schiebel W.|||Thalmeir S.|||Wassenegger M.
http://togogenome.org/gene/4081:LOC101261718 ^@ http://purl.uniprot.org/uniprot/A0A346LVG0 ^@ 28817560 ^@ PLoS Genet|||PLoS Genet. ^@ Fruit weight is controlled by Cell Size Regulator encoding a novel protein that is expressed in maturing tomato fruits. ^@ Chakrabarti M.|||Huang Z.|||Illa-Berenguer E.|||Liu X.|||Mu Q.|||Ramos A.|||Wang Y.|||van der Knaap E.
http://togogenome.org/gene/4081:MSH2 ^@ http://purl.uniprot.org/uniprot/D6QY20 ^@ 19690966 ^@ Genetica ^@ Characterization and comparative sequence analysis of the DNA mismatch repair MSH2 and MSH7 genes from tomato. ^@ Britt A.|||Chetelat R.T.|||Samipak S.|||Tam S.M.
http://togogenome.org/gene/4081:FLACCA ^@ http://purl.uniprot.org/uniprot/Q8LGM7 ^@ 12164810 ^@ Plant J. ^@ The absence of molybdenum cofactor sulfuration is the primary cause of the flacca phenotype in tomato plants. ^@ Fluhr R.|||Sagi M.|||Scazzocchio C.
http://togogenome.org/gene/4081:PAR1 ^@ http://purl.uniprot.org/uniprot/A6N6K7 ^@ 17644147 ^@ Phytochemistry ^@ Tomato phenylacetaldehyde reductases catalyze the last step in the synthesis of the aroma volatile 2-phenylethanol. ^@ Clark D.G.|||Kim J.Y.|||Klee H.J.|||Loucas H.M.|||Tieman D.M.
http://togogenome.org/gene/4081:LOC100736477 ^@ http://purl.uniprot.org/uniprot/F8SS63 ^@ 22211518 ^@ Plant J|||Plant J. ^@ Evaluating auxin distribution in tomato (Solanum lycopersicum) through an analysis of the PIN and AUX/LAX gene families. ^@ Catala C.|||Pattison R.J.
http://togogenome.org/gene/4081:CITRX ^@ http://purl.uniprot.org/uniprot/Q9LKW0 ^@ 15131698|||26315781 ^@ EMBO J.|||Mol. Plant Pathol. ^@ A mutational analysis of the cytosolic domain of the tomato Cf-9 disease-resistance protein shows that membrane-proximal residues are important for Avr9-dependent necrosis.|||CITRX thioredoxin interacts with the tomato Cf-9 resistance protein and negatively regulates defence. ^@ Chakrabarti A.|||Jones D.A.|||Jones J.D.|||Rivas S.|||Rougon-Cardoso A.|||Schauser L.|||Smoker M.|||Tee C.Y.|||Velusamy T.|||Yoshioka H.
http://togogenome.org/gene/4081:TFT6 ^@ http://purl.uniprot.org/uniprot/P93211 ^@ 10198082|||11752381 ^@ Plant Cell|||Plant Physiol. ^@ Fusicoccin, 14-3-3 proteins, and defense responses in tomato plants.|||Tomato SP-interacting proteins define a conserved signaling system that regulates shoot architecture and flowering. ^@ Adir N.|||Ben-Naim O.|||Bowles D.J.|||Gutfinger T.|||Hareven D.|||Lifschitz E.|||Pnueli L.|||Roberts M.R.|||Ron N.
http://togogenome.org/gene/4081:LOC101250808 ^@ http://purl.uniprot.org/uniprot/A0A3Q7H1U4 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:gdh1 ^@ http://purl.uniprot.org/uniprot/P93541 ^@ 9074503 ^@ Gene ^@ Cloning and characterisation of a glutamate dehydrogenase cDNA from tomato (Lycopersicon esculentum L.). ^@ Botella J.R.|||Purnell M.P.|||Stewart G.R.
http://togogenome.org/gene/4081:Cel3 ^@ http://purl.uniprot.org/uniprot/O04890 ^@ 9114071 ^@ Proc Natl Acad Sci U S A|||Proc. Natl. Acad. Sci. U.S.A. ^@ A membrane-anchored E-type endo-1,4-beta-glucanase is localized on Golgi and plasma membranes of higher plants. ^@ Bennett A.B.|||Brummell D.A.|||Catala C.|||Lashbrook C.C.
http://togogenome.org/gene/4081:MSH1 ^@ http://purl.uniprot.org/uniprot/Q1XBQ6 ^@ 16830098 ^@ J. Mol. Evol. ^@ Mitochondrial genome dynamics in plants and animals: convergent gene fusions of a MutS homologue. ^@ Abdelnoor R.V.|||Christensen A.C.|||Mackenzie S.A.|||Mohammed S.|||Moriyama H.|||Munoz-Castillo B.
http://togogenome.org/gene/4081:ASH1 ^@ http://purl.uniprot.org/uniprot/K4C1J7 ^@ 26811191 ^@ Plant Physiol|||Plant Physiol. ^@ Acylsugar Acylhydrolases: Carboxylesterase-Catalyzed Hydrolysis of Acylsugars in Tomato Trichomes. ^@ Ghosh B.|||Gilgallon K.|||Jones A.D.|||Last R.L.|||Schilmiller A.L.
http://togogenome.org/gene/4081:GST-T4 ^@ http://purl.uniprot.org/uniprot/Q9FT20 ^@ 15037622 ^@ J Biol Chem|||J. Biol. Chem. ^@ Differential roles of tau class glutathione S-transferases in oxidative stress. ^@ Al-Sabarna K.|||Atanassova N.|||Clatot N.|||Kampranis S.C.|||Kanellopoulos P.N.|||Kilili K.G.|||Makris A.M.|||Vardanyan A.
http://togogenome.org/gene/4081:RAD51 ^@ http://purl.uniprot.org/uniprot/Q40134 ^@ 9021132 ^@ Curr. Genet. ^@ Isolation and characterization of rad51 orthologs from Coprinus cinereus and Lycopersicon esculentum, and phylogenetic analysis of eukaryotic recA homologs. ^@ Logsdon J.M. Jr.|||Offenberg H.H.|||Palmer J.D.|||Stassen N.Y.|||Vora G.J.|||Zolan M.E.
http://togogenome.org/gene/4081:det2 ^@ http://purl.uniprot.org/uniprot/Q5K2N1 ^@ 15993049 ^@ J. Steroid Biochem. Mol. Biol. ^@ 5alpha-Reductase activity in Lycopersicon esculentum: cloning and functional characterization of LeDET2 and evidence of the presence of two isoenzymes. ^@ Bardazzi I.|||Danza G.|||De Blasi P.|||Guarna A.|||Racchi M.L.|||Rosati F.|||Scarpi D.|||Serio M.|||Simi L.
http://togogenome.org/gene/4081:LOC101244806 ^@ http://purl.uniprot.org/uniprot/V5YMW5 ^@ 24260152 ^@ PLoS ONE|||PLoS One ^@ Genome-wide identification and expression analysis of aquaporins in tomato. ^@ Akiyama M.|||Aoki K.|||Mori C.|||Reuscher S.|||Shibata D.|||Shiratake K.
http://togogenome.org/gene/4081:GAD2 ^@ http://purl.uniprot.org/uniprot/B1Q3F1 ^@ 18713763 ^@ Plant Cell Physiol. ^@ Biochemical mechanism on GABA accumulation during fruit development in tomato. ^@ Akama K.|||Akihiro T.|||Aoki K.|||Ashihara H.|||Ezura H.|||Fujimura T.|||Iijima Y.|||Koike S.|||Matsukura C.|||Shibata D.|||Tani R.|||Tominaga T.|||Watanabe S.
http://togogenome.org/gene/4081:SGS3 ^@ http://purl.uniprot.org/uniprot/A5YVF1|||http://purl.uniprot.org/uniprot/I7C7U0 ^@ 18165314|||23001036 ^@ Plant Cell|||Proc. Natl. Acad. Sci. U.S.A. ^@ Failure of the Tomato Trans-Acting Short Interfering RNA Program to Regulate AUXIN RESPONSE FACTOR3 and ARF4 Underlies the Wiry Leaf Syndrome.|||Failure of the tomato trans-acting short interfering RNA program to regulate AUXIN RESPONSE FACTOR3 and ARF4 underlies the wiry leaf syndrome.|||Interaction with host SGS3 is required for suppression of RNA silencing by tomato yellow leaf curl virus V2 protein. ^@ Alvarez J.P.|||Amsellem Z.|||Belausov E.|||Citovsky V.|||Eshed Y.|||Friedlander G.|||Gafni Y.|||Gidoni D.|||Glick E.|||Levy Y.|||Mett A.|||Pekker I.|||Peled D.|||Pistunov A.|||Sabban M.|||Wachsman G.|||Yifhar T.|||Zrachya A.
http://togogenome.org/gene/4081:LOC101247032 ^@ http://purl.uniprot.org/uniprot/K4C8V0 ^@ 23080016 ^@ Planta ^@ The developmental outcomes of P0-mediated ARGONAUTE destabilization in tomato. ^@ Arazi T.|||Hendelman A.|||Kravchik M.|||Lugassi N.|||Stav R.|||Zik M.
http://togogenome.org/gene/4081:EIL2 ^@ http://purl.uniprot.org/uniprot/Q94FV3 ^@ 11359609 ^@ Plant J|||Plant J. ^@ Members of the tomato LeEIL (EIN3-like) gene family are functionally redundant and regulate ethylene responses throughout plant development. ^@ Ciardi J.A.|||Klee H.J.|||Taylor M.G.|||Tieman D.M.
http://togogenome.org/gene/4081:LyesC2p088 ^@ http://purl.uniprot.org/uniprot/A0A0C5CE94|||http://purl.uniprot.org/uniprot/Q2MIB9 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:TPS37 ^@ http://purl.uniprot.org/uniprot/G5CV41 ^@ 21813655 ^@ Plant Physiol. ^@ The tomato terpene synthase gene family. ^@ Akhtar T.A.|||Bleeker P.M.|||Bonini M.E.|||Falara V.|||Last R.L.|||Matsuba Y.|||Nguyen T.T.|||Nguyen T.T.H.|||Pichersky E.|||Schauvinhold I.|||Schilmiller A.L.|||Schuurink R.C.|||Spyropoulou E.A.
http://togogenome.org/gene/4081:rbcS1 ^@ http://purl.uniprot.org/uniprot/P08706 ^@ 3012537|||3478552|||3557127|||8425051 ^@ Gene|||Mol. Gen. Genet.|||Plant Mol. Biol.|||Proc. Natl. Acad. Sci. U.S.A. ^@ Developmental and organ-specific changes in DNA-protein interactions in the tomato rbcS1, rbcS2 and rbcS3A promoter regions.|||Evidence for selection as a mechanism in the concerted evolution of Lycopersicon esculentum (tomato) genes encoding the small subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase.|||Genomic organization, sequence analysis and expression of all five genes encoding the small subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase from tomato.|||Nucleotide sequence and molecular evolution of two tomato genes encoding the small subunit of ribulose-1,5-bisphosphate carboxylase. ^@ Alexander D.C.|||Babcock M.S.|||Bernatzky R.|||Carrasco P.|||Cashmore A.|||Cashmore A.R.|||Gruissem W.|||Manzara T.|||McKnight T.D.|||Pichersky E.|||Simpson R.B.|||Sugita M.|||Tanksley S.D.
http://togogenome.org/gene/4081:Hsp20.0 ^@ http://purl.uniprot.org/uniprot/G5DGD4 ^@ 21947620 ^@ Planta ^@ Features of a unique intronless cluster of class I small heat shock protein genes in tandem with box C/D snoRNA genes on chromosome 6 in tomato (Solanum lycopersicum). ^@ Chung S.H.|||Giovannoni J.J.|||Goyal R.K.|||Kumar V.|||Liu Y.|||Mattoo A.K.|||Mattoo R.|||Shukla V.
http://togogenome.org/gene/4081:Hsp90-1 ^@ http://purl.uniprot.org/uniprot/Q6UJX4 ^@ 14583611 ^@ J Biol Chem|||J. Biol. Chem. ^@ Molecular chaperone Hsp90 associates with resistance protein N and its signaling proteins SGT1 and Rar1 to modulate an innate immune response in plants. ^@ Burch-Smith T.|||Dinesh-Kumar S.P.|||Feng S.|||Liu Y.|||Schiff M.
http://togogenome.org/gene/4081:MCA2 ^@ http://purl.uniprot.org/uniprot/K4B2A1 ^@ 23086343 ^@ Planta ^@ Induction of a ricinosomal-protease and programmed cell death in tomato endosperm by gibberellic acid. ^@ Greenwood J.S.|||Holley C.|||Senatore A.|||Trobacher C.P.
http://togogenome.org/gene/4081:LOC544002 ^@ http://purl.uniprot.org/uniprot/Q40131 ^@ 28754839|||7647301 ^@ Plant Mol. Biol.|||Plant Physiol|||Plant Physiol. ^@ A Dioxygenase Catalyzes Steroid 16?-Hydroxylation in Steroidal Glycoalkaloid Biosynthesis.|||A Dioxygenase Catalyzes Steroid 16alpha-Hydroxylation in Steroidal Glycoalkaloid Biosynthesis.|||Nature and regulation of pistil-expressed genes in tomato. ^@ Fujimoto Y.|||Gasser C.S.|||Lee H.J.|||Milligan S.B.|||Mizutani M.|||Muranaka T.|||Nakayasu M.|||Ohyama K.|||Saito K.|||Sugimoto Y.|||Umemoto N.|||Watanabe B.
http://togogenome.org/gene/4081:THOM1 ^@ http://purl.uniprot.org/uniprot/Q42437 ^@ 7766050 ^@ Planta ^@ Isolation and characterization of the tomato homeobox gene THOM1. ^@ Meissner R.|||Theres K.
http://togogenome.org/gene/4081:cellulase ^@ http://purl.uniprot.org/uniprot/Q42875 ^@ 7647301 ^@ Plant Mol. Biol. ^@ Nature and regulation of pistil-expressed genes in tomato. ^@ Gasser C.S.|||Milligan S.B.
http://togogenome.org/gene/4081:FZY5 ^@ http://purl.uniprot.org/uniprot/D2IGV4 ^@ 21435892 ^@ Plant Physiol Biochem|||Plant Physiol. Biochem. ^@ Gene structure and spatiotemporal expression profile of tomato genes encoding YUCCA-like flavin monooxygenases: The ToFZY gene family.|||Gene structure and spatiotemporal expression profile of tomato genes encoding YUCCA-like flavin monooxygenases: the ToFZY gene family. ^@ Borges A.A.|||Borges-Perez A.|||Exposito-Rodriguez M.|||Perez J.A.
http://togogenome.org/gene/4081:LOC100037490 ^@ http://purl.uniprot.org/uniprot/Q0H8U3 ^@ 18324417 ^@ Mol Genet Genomics|||Mol. Genet. Genomics ^@ Programmed cell death suppression in transformed plant tissue by tomato cDNAs identified from an Agrobacterium rhizogenes-based functional screen. ^@ Gilchrist D.G.|||Harvey J.J.|||Lincoln J.E.
http://togogenome.org/gene/4081:TAS14 ^@ http://purl.uniprot.org/uniprot/P22240 ^@ 2151719|||8980494 ^@ Plant Mol. Biol. ^@ A tomato cDNA inducible by salt stress and abscisic acid: nucleotide sequence and expression pattern.|||Structure of the dehydrin tas14 gene of tomato and its developmental and environmental regulation in transgenic tobacco. ^@ Godoy J.A.|||Luna R.|||Pardo J.M.|||Parra M.M.|||Pintor-Toro J.A.|||del Pozo O.
http://togogenome.org/gene/4081:cat1 ^@ http://purl.uniprot.org/uniprot/P30264 ^@ 16653169 ^@ Plant Physiol. ^@ Molecular cloning and nucleotide sequence of a cDNA encoding catalase from tomato. ^@ Drory A.|||Woodson W.R.
http://togogenome.org/gene/4081:LOC101249905 ^@ http://purl.uniprot.org/uniprot/A0A3Q7FTS1 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:CHI3 ^@ http://purl.uniprot.org/uniprot/Q05539 ^@ 8400122 ^@ Plant Mol. Biol. ^@ Molecular characterization of four chitinase cDNAs obtained from Cladosporium fulvum-infected tomato. ^@ Danhash N.|||Wagemakers C.A.M.|||de Wit P.J.G.M.|||van Kan J.A.L.
http://togogenome.org/gene/4081:LOC101247769 ^@ http://purl.uniprot.org/uniprot/B1N671 ^@ 18339939 ^@ Science ^@ A retrotransposon-mediated gene duplication underlies morphological variation of tomato fruit. ^@ Jiang N.|||Schaffner E.|||Stockinger E.J.|||Xiao H.|||van der Knaap E.
http://togogenome.org/gene/4081:LyesC2p018 ^@ http://purl.uniprot.org/uniprot/A0A0C5CEF6|||http://purl.uniprot.org/uniprot/Q2MI51 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LOC543683 ^@ http://purl.uniprot.org/uniprot/K4BN65 ^@ 27909045 ^@ Plant Physiol|||Plant Physiol. ^@ A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity. ^@ Chen X.|||Connor R.A.|||Gough J.|||Martin G.B.|||Mural R.V.|||Oates M.E.|||Zeng L.|||Zhou B.
http://togogenome.org/gene/4081:LOC101055541 ^@ http://purl.uniprot.org/uniprot/G9HPV2 ^@ 22368074 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ Genome-Wide Identification, Functional Analysis and Expression Profiling of the Aux/IAA Gene Family in Tomato.|||Genome-wide identification, functional analysis and expression profiling of the Aux/IAA gene family in tomato. ^@ Audran-Delalande C.|||Bassa C.|||Bouzayen M.|||Mila I.|||Regad F.|||Zouine M.
http://togogenome.org/gene/4081:eIF4E2 ^@ http://purl.uniprot.org/uniprot/A0A3Q7FGP1 ^@ 22242134|||24309680|||26850324|||27655175 ^@ Infect. Genet. Evol.|||J. Gen. Virol.|||PLoS ONE|||Plant J. ^@ A TILLING approach to generate broad-spectrum resistance to potyviruses in tomato is hampered by eIF4E gene redundancy.|||A new eIF4E1 allele characterized by RNAseq data mining is associated with resistance to potato virus Y in tomato albeit with a low durability.|||Evolution of plant eukaryotic initiation factor 4E (eIF4E) and potyvirus genome-linked protein (VPg): a game of mirrors impacting resistance spectrum and durability.|||Knock-down of both eIF4E1 and eIF4E2 genes confers broad-spectrum resistance against potyviruses in tomato. ^@ Bonnet G.|||Caranta C.|||Charron C.|||Constant C.|||Flamain F.|||Gallois J.-L.|||Gallois J.L.|||Gauffier C.|||German-Retana S.|||Janzac B.|||Lebaron C.|||Mazier M.|||Moquet F.|||Moretti A.|||Moury B.|||Nicolai M.|||Palloix A.|||Rosado A.|||Sarnette V.|||Sauvage C.|||Simon V.
http://togogenome.org/gene/4081:LyesC2p037 ^@ http://purl.uniprot.org/uniprot/A0A0C5C9V1|||http://purl.uniprot.org/uniprot/Q2MI68 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LeVP3 ^@ http://purl.uniprot.org/uniprot/K4BTH5 ^@ 22915738 ^@ J Exp Bot|||J. Exp. Bot. ^@ Role of Vacuolar H+-inorganic Pyrophosphatase in Tomato Fruit Development.|||Role of Vacuolar H+-inorganic pyrophosphatase in tomato fruit development. ^@ Ikeda H.|||Kanahama K.|||Kanayama Y.|||Mohammed S.A.|||Nishio S.|||Shiratake K.|||Takahashi H.
http://togogenome.org/gene/4081:hsc70 ^@ http://purl.uniprot.org/uniprot/P27322 ^@ 1893113 ^@ Plant Mol. Biol. ^@ Sequences of two hsc 70 cDNAs from Lycopersicon esculentum. ^@ Duck N.B.|||Folk W.R.|||Lin T.Y.|||Winter J.
http://togogenome.org/gene/4081:LOC544150 ^@ http://purl.uniprot.org/uniprot/P51107 ^@ 7907304 ^@ Gene ^@ Characterization of the gene encoding dihydroflavonol 4-reductase in tomato. ^@ Bongue-Bartelsman M.|||O'Neill S.D.|||Tong Y.|||Yoder J.I.
http://togogenome.org/gene/4081:LOC543954 ^@ http://purl.uniprot.org/uniprot/P05118 ^@ 2987227|||3463966 ^@ J. Biol. Chem.|||Proc. Natl. Acad. Sci. U.S.A. ^@ Molecular characterization and phylogenetic studies of a wound-inducible proteinase inhibitor I gene in Lycopersicon species.|||Wound-induced proteinase inhibitors from tomato leaves. I. The cDNA-deduced primary structure of pre-inhibitor I and its post-translational processing. ^@ Ahern K.G.|||Brown W.E.|||Dreher T.W.|||Ericsson L.|||Fox E.A.|||Graham J.S.|||Lee J.S.|||Merryweather J.|||Pearce G.|||Pearson G.D.|||Ryan C.A.|||Titani K.
http://togogenome.org/gene/4081:LOC101254048 ^@ http://purl.uniprot.org/uniprot/Q9FYX3 ^@ 10908680 ^@ Proc Natl Acad Sci U S A|||Proc. Natl. Acad. Sci. U.S.A. ^@ Comparing sequenced segments of the tomato and Arabidopsis genomes: large-scale duplication followed by selective gene loss creates a network of synteny. ^@ Ku H.M.|||Liu J.|||Tanksley S.D.|||Vision T.
http://togogenome.org/gene/4081:LyesC2p024 ^@ http://purl.uniprot.org/uniprot/A0A0C5CEF4|||http://purl.uniprot.org/uniprot/P0CD46|||http://purl.uniprot.org/uniprot/P0CD47 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LecRK-XI ^@ http://purl.uniprot.org/uniprot/K4CRD3 ^@ 26248665 ^@ J Exp Bot|||J. Exp. Bot. ^@ L-type lectin receptor kinases in Nicotiana benthamiana and tomato and their role in Phytophthora resistance. ^@ Bouwmeester K.|||Govers F.|||Wang Y.|||Weide R.
http://togogenome.org/gene/4081:LOC101255600 ^@ http://purl.uniprot.org/uniprot/K4C9T0 ^@ 24260152 ^@ PLoS ONE|||PLoS One ^@ Genome-wide identification and expression analysis of aquaporins in tomato. ^@ Akiyama M.|||Aoki K.|||Mori C.|||Reuscher S.|||Shibata D.|||Shiratake K.
http://togogenome.org/gene/4081:LOC101265661 ^@ http://purl.uniprot.org/uniprot/K4B017 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:LOC101243797 ^@ http://purl.uniprot.org/uniprot/A0A2D1A7Z5 ^@ 28814642 ^@ Plant Cell ^@ An InDel in the Promoter of Al-ACTIVATED MALATE TRANSPORTER9 Selected during Tomato Domestication Determines Fruit Malate Contents and Aluminum Tolerance.|||An InDel in the Promoter of Al-ACTIVATED MALATE TRANSPORTER9 Selected during Tomato Domestication Determines Fruit Malate Contents and Aluminum Tolerance. ^@ Giovannoni J.J.|||Hu T.|||Li C.|||Li H.|||Lu Y.|||Wang B.|||Wang X.|||Yang T.|||Ye J.|||Ye Z.|||Zhang F.|||Zhang Y.
http://togogenome.org/gene/4081:LAT56 ^@ http://purl.uniprot.org/uniprot/P15721 ^@ 1983191 ^@ Plant Mol. Biol. ^@ Molecular and genetic characterization of two pollen-expressed genes that have sequence similarity to pectate lyases of the plant pathogen Erwinia. ^@ Larabell S.K.|||McCormick S.|||Ursin V.M.|||Wing R.A.|||Yamaguchi J.
http://togogenome.org/gene/4081:LOC101258605 ^@ http://purl.uniprot.org/uniprot/K4B4Z0 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:TAO2 ^@ http://purl.uniprot.org/uniprot/Q9FV24 ^@ 11018259 ^@ Biochim Biophys Acta|||Biochim. Biophys. Acta ^@ Molecular cloning and expression patterns of three putative functional aldehyde oxidase genes and isolation of two aldehyde oxidase pseudogenes in tomato. ^@ Brockmann B.|||Kamiya Y.|||Koshiba T.|||Min X.|||Okada K.
http://togogenome.org/gene/4081:CCR2 ^@ http://purl.uniprot.org/uniprot/Q4U1I4 ^@ 16551686 ^@ J Exp Bot|||J. Exp. Bot. ^@ Down-regulation of cinnamoyl-CoA reductase in tomato (Solanum lycopersicum L.) induces dramatic changes in soluble phenolic pools. ^@ Boudet A.M.|||Danoun S.|||Rochange S.F.|||van der Rest B.
http://togogenome.org/gene/4081:AT3 ^@ http://purl.uniprot.org/uniprot/I6TNE6 ^@ 22988115 ^@ Proc Natl Acad Sci U S A|||Proc. Natl. Acad. Sci. U.S.A. ^@ Identification of a BAHD acetyltransferase that produces protective acyl sugars in tomato trichomes. ^@ Charbonneau A.L.|||Last R.L.|||Schilmiller A.L.
http://togogenome.org/gene/4081:LCA1 ^@ http://purl.uniprot.org/uniprot/Q42883 ^@ 10394952|||1384045 ^@ Plant Mol. Biol.|||Proc. Natl. Acad. Sci. U.S.A. ^@ Alternative transcription initiation sites generate two LCA1 Ca2+-ATPase mRNA transcripts in tomato roots.|||Higher plant Ca2+-ATPase: primary structure and regulation of mRNA abundance by salt. ^@ Bennett A.B.|||Ewing N.N.|||Hentzen A.E.|||Navarro-Avino J.P.|||Wimmers L.E.
http://togogenome.org/gene/4081:H2B-1 ^@ http://purl.uniprot.org/uniprot/O65821 ^@ 10344194 ^@ Plant Mol. Biol. ^@ Isolation and molecular characterization of gibberellin-regulated H1 and H2B histone cDNAs in the leaf of the gibberellin-deficient tomato. ^@ Barendse G.W.M.|||Wullems G.J.|||van Esch R.J.|||van den Heuvel K.J.P.T.
http://togogenome.org/gene/4081:LOC101247958 ^@ http://purl.uniprot.org/uniprot/A0A384ZK33 ^@ 29868054 ^@ Front Plant Sci|||Front. Plant Sci. ^@ Identification and Characterization of Sterol Acyltransferases Responsible for Steryl Ester Biosynthesis in Tomato. ^@ Altabella T.|||Arro M.|||Boronat A.|||Burciaga-Monge A.|||Chavez A.|||Ferrer A.|||Lara J.A.|||Lavilla R.|||Reves M.
http://togogenome.org/gene/4081:LOC104648118 ^@ http://purl.uniprot.org/uniprot/D5KXD2 ^@ 20431087|||21813655|||21818683 ^@ Plant Mol. Biol.|||Plant Physiol. ^@ RNA-seq discovery, functional characterization, and comparison of sesquiterpene synthases from Solanum lycopersicum and Solanum habrochaites trichomes.|||Studies of a biochemical factory: tomato trichome deep expressed sequence tag sequencing and proteomics.|||The tomato terpene synthase gene family. ^@ Akhtar T.A.|||Bleeker P.M.|||Bohlmann J.|||Bonini M.E.|||De Both M.T.J.|||Diergaarde P.J.|||Falara V.|||Gang D.R.|||Haring M.A.|||Larson M.|||Last R.L.|||Matsuba Y.|||McDowell E.|||Miner D.P.|||Nguyen T.T.|||Nguyen T.T.H.|||Pichersky E.|||Schauvinhold I.|||Schilmiller A.L.|||Schuurink R.C.|||Spyropoulou E.A.|||Volpin H.|||Wilkerson C.|||Zerbe P.
http://togogenome.org/gene/4081:LYR ^@ http://purl.uniprot.org/uniprot/C6ES39 ^@ 19820188 ^@ Plant Cell ^@ LYRATE is a key regulator of leaflet initiation and lamina outgrowth in tomato. ^@ David-Schwartz R.|||Koenig D.|||Sinha N.R.
http://togogenome.org/gene/4081:LyesC2p004 ^@ http://purl.uniprot.org/uniprot/A0A0C5CHH1|||http://purl.uniprot.org/uniprot/P61242 ^@ 16575560|||16830097|||1718481|||25604480|||7874744 ^@ Curr. Genet.|||J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Plant Mol. Biol.|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Expression of the large plastid gene, ORF2280, in tomato fruits and flowers.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||Survey of plastid RNA abundance during tomato fruit ripening: the amounts of RNA from the ORF 2280 region increase in chromoplasts.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Boyer C.D.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Hardison R.C.|||Hinman S.B.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Richards C.M.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LOC100736470 ^@ http://purl.uniprot.org/uniprot/F2YHL2 ^@ 21867679 ^@ Biochem Biophys Res Commun|||Biochem. Biophys. Res. Commun. ^@ The plant cell death suppressor Adi3 interacts with the autophagic protein Atg8h. ^@ Devarenne T.P.
http://togogenome.org/gene/4081:LOC101266615 ^@ http://purl.uniprot.org/uniprot/K4DHV2 ^@ 27909045 ^@ Plant Physiol|||Plant Physiol. ^@ A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity. ^@ Chen X.|||Connor R.A.|||Gough J.|||Martin G.B.|||Mural R.V.|||Oates M.E.|||Zeng L.|||Zhou B.
http://togogenome.org/gene/4081:LOC101262418 ^@ http://purl.uniprot.org/uniprot/K4C2D3 ^@ 27909045 ^@ Plant Physiol|||Plant Physiol. ^@ A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity. ^@ Chen X.|||Connor R.A.|||Gough J.|||Martin G.B.|||Mural R.V.|||Oates M.E.|||Zeng L.|||Zhou B.
http://togogenome.org/gene/4081:lTTS1 ^@ http://purl.uniprot.org/uniprot/E7DN63 ^@ 21059824 ^@ Plant Physiol. ^@ Two oxidosqualene cyclases responsible for biosynthesis of tomato fruit cuticular triterpenoids. ^@ Guhling O.|||Jetter R.|||Li F.|||Rose J.|||Wang Z.|||Yao R.|||Yeats T.
http://togogenome.org/gene/4081:ODD ^@ http://purl.uniprot.org/uniprot/Q4W8D2 ^@ 16008092 ^@ J Plant Physiol|||J. Plant Physiol. ^@ Enhanced expression of a novel dioxygenase during the early developmental stage of tomato fruit. ^@ Kanahama K.|||Kanayama Y.|||Ohta K.
http://togogenome.org/gene/4081:TSW12 ^@ http://purl.uniprot.org/uniprot/P27056 ^@ 1558948 ^@ Plant Mol. Biol. ^@ A probable lipid transfer protein gene is induced by NaCl in stems of tomato plants. ^@ Godoy J.A.|||Pintor-Toro J.A.|||Torres-Schumann S.
http://togogenome.org/gene/4081:LOC543842 ^@ http://purl.uniprot.org/uniprot/Q8H280 ^@ 13677468 ^@ Plant Mol Biol|||Plant Mol. Biol. ^@ MADS-box genes expressed during tomato seed and fruit development. ^@ Boggio S.B.|||Busi M.V.|||Bustamante C.|||D'Angelo C.|||Hidalgo-Cuevas M.|||Valle E.M.|||Zabaleta E.
http://togogenome.org/gene/4081:LOC101257090 ^@ http://purl.uniprot.org/uniprot/K4CIV6 ^@ 27909045 ^@ Plant Physiol|||Plant Physiol. ^@ A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity. ^@ Chen X.|||Connor R.A.|||Gough J.|||Martin G.B.|||Mural R.V.|||Oates M.E.|||Zeng L.|||Zhou B.
http://togogenome.org/gene/4081:LOC543838 ^@ http://purl.uniprot.org/uniprot/Q84V30 ^@ 12857846 ^@ Plant Physiol. ^@ Mitochondrial phosphatidylserine decarboxylase from higher plants. Functional complementation in yeast, localization in plants, and overexpression in Arabidopsis. ^@ Hanson A.D.|||Rontein D.|||Voelker D.R.|||Wu W.-I.
http://togogenome.org/gene/4081:LOC101248209 ^@ http://purl.uniprot.org/uniprot/P35057 ^@ 7764315 ^@ Planta ^@ The pattern of histone H4 expression in the tomato shoot apex changes during development. ^@ Brandstaedter J.U.|||Rossbach C.|||Thers K.
http://togogenome.org/gene/4081:AI ^@ http://purl.uniprot.org/uniprot/A0A220QMI6|||http://purl.uniprot.org/uniprot/P29000 ^@ 1304771|||28634826|||8095164 ^@ Jpn. J. Genet.|||Mol Genet Genomics|||Mol. Genet. Genomics|||Plant Mol. Biol. ^@ A novel cDNA clone for acid invertase in tomato fruit.|||Isolation and characterization of fruit vacuolar invertase genes from two tomato species and temporal differences in mRNA levels during fruit ripening.|||TAI vacuolar invertase orthologs: the interspecific variability in tomato plants (Solanum section Lycopersicon). ^@ Butler W.O.|||Dickinson C.D.|||Elliott K.J.|||Fitzmaurice L.|||Hirai M.|||Kochieva E.Z.|||Konno Y.|||Mirkov T.E.|||Nishimura S.|||Ohyama A.|||Shchennikova A.V.|||Slugina M.A.|||Vedvick T.S.
http://togogenome.org/gene/4081:CD2 ^@ http://purl.uniprot.org/uniprot/C7DTT1 ^@ 19594708 ^@ Plant J|||Plant J. ^@ Cutin deficiency in the tomato fruit cuticle consistently affects resistance to microbial infection and biomechanical properties, but not transpirational water loss. ^@ Batteas J.D.|||Buda G.J.|||He Y.|||Isaacson T.|||Jenks M.A.|||Kosma D.K.|||Matas A.J.|||Pravitasari A.|||Rose J.K.|||Stark R.E.|||Yu B.
http://togogenome.org/gene/4081:Xpo1 ^@ http://purl.uniprot.org/uniprot/D1MAF2 ^@ 20371603 ^@ J Biol Chem|||J. Biol. Chem. ^@ The T-loop extension of the tomato protein kinase AvrPto-dependent Pto-interacting protein 3 (Adi3) directs nuclear localization for suppression of plant cell death. ^@ Avila J.|||Cheng C.|||Devarenne T.P.|||Ek-Ramos M.J.|||Martin G.B.
http://togogenome.org/gene/4081:TPS32 ^@ http://purl.uniprot.org/uniprot/G5CV45 ^@ 21813655 ^@ Plant Physiol. ^@ The tomato terpene synthase gene family. ^@ Akhtar T.A.|||Bleeker P.M.|||Bonini M.E.|||Falara V.|||Last R.L.|||Matsuba Y.|||Nguyen T.T.|||Nguyen T.T.H.|||Pichersky E.|||Schauvinhold I.|||Schilmiller A.L.|||Schuurink R.C.|||Spyropoulou E.A.
http://togogenome.org/gene/4081:GGP ^@ http://purl.uniprot.org/uniprot/H9D2D6 ^@ 23267461|||30607742 ^@ Dokl Biochem Biophys|||Dokl. Biochem. Biophys.|||J Plant Physiol|||J. Plant Physiol. ^@ Antisense-mediated depletion of tomato GDP-L-galactose phosphorylase increases susceptibility to chilling stress.|||Identification and Analysis of VTC2 Homologs Encoding the Key Enzyme of L-Ascorbic Acid Biosynthesis in Tomato Species (Solanum Section of Lycopersicon). ^@ Deng Y.S.|||Kochieva E.Z.|||Li D.|||Lv W.|||Meng Q.W.|||Slugina M.A.|||Tyapkina D.U.|||Wang L.Y.
http://togogenome.org/gene/4081:LyesC2p016 ^@ http://purl.uniprot.org/uniprot/A0A0C5CHH4|||http://purl.uniprot.org/uniprot/Q2MI49 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:eIF-5A3 ^@ http://purl.uniprot.org/uniprot/Q9AXQ4 ^@ 11278418 ^@ J. Biol. Chem. ^@ Isolation and characterization of senescence-induced cDNAs encoding deoxyhypusine synthase and eucaryotic translation initiation factor 5A from tomato. ^@ Lu L.|||Thompson J.E.|||Wang D.|||Wang T.-W.
http://togogenome.org/gene/4081:LOC101055552 ^@ http://purl.uniprot.org/uniprot/G9HPX0 ^@ 22368074 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ Genome-Wide Identification, Functional Analysis and Expression Profiling of the Aux/IAA Gene Family in Tomato.|||Genome-wide identification, functional analysis and expression profiling of the Aux/IAA gene family in tomato. ^@ Audran-Delalande C.|||Bassa C.|||Bouzayen M.|||Mila I.|||Regad F.|||Zouine M.
http://togogenome.org/gene/4081:UBC3 ^@ http://purl.uniprot.org/uniprot/B7U4A4 ^@ 19445598|||27909045 ^@ Mol Plant Microbe Interact|||Mol. Plant Microbe Interact.|||Plant Physiol|||Plant Physiol. ^@ A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity.|||Interaction with a host ubiquitin-conjugating enzyme is required for the pathogenicity of a geminiviral DNA beta satellite. ^@ Chen X.|||Connor R.A.|||Dogra S.|||Dry I.B.|||Eini O.|||Gough J.|||Martin G.B.|||Mural R.V.|||Oates M.E.|||Randles J.W.|||Rezaian M.A.|||Selth L.A.|||Zeng L.|||Zhou B.
http://togogenome.org/gene/4081:LOC101262489 ^@ http://purl.uniprot.org/uniprot/K4BE78 ^@ 25052853 ^@ Plant Physiol|||Plant Physiol. ^@ Geranyllinalool synthases in solanaceae and other angiosperms constitute an ancient branch of diterpene synthases involved in the synthesis of defensive compounds. ^@ Alba J.M.|||Falara V.|||Kant M.R.|||Pichersky E.|||Schuurink R.C.
http://togogenome.org/gene/4081:LOC100736504 ^@ http://purl.uniprot.org/uniprot/D3W9H7 ^@ 20128892 ^@ BMC Plant Biol|||BMC Plant Biol. ^@ Identification and characterisation of CYP75A31, a new flavonoid 3'5'-hydroxylase, isolated from Solanum lycopersicum. ^@ Bourgaud F.|||Hehn A.|||Jugde H.|||Larbat R.|||Lillo C.|||Olsen K.M.|||Slimestad R.
http://togogenome.org/gene/4081:LyesC2p075 ^@ http://purl.uniprot.org/uniprot/A0A0C5CEB2|||http://purl.uniprot.org/uniprot/Q2MIA6 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LOC101055551 ^@ http://purl.uniprot.org/uniprot/G9HPW9 ^@ 22368074 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ Genome-Wide Identification, Functional Analysis and Expression Profiling of the Aux/IAA Gene Family in Tomato.|||Genome-wide identification, functional analysis and expression profiling of the Aux/IAA gene family in tomato. ^@ Audran-Delalande C.|||Bassa C.|||Bouzayen M.|||Mila I.|||Regad F.|||Zouine M.
http://togogenome.org/gene/4081:CyP ^@ http://purl.uniprot.org/uniprot/P21568 ^@ 1702215 ^@ Proc. Natl. Acad. Sci. U.S.A. ^@ Structure and expression of cytosolic cyclophilin/peptidyl-prolyl cis-trans isomerase of higher plants and production of active tomato cyclophilin in Escherichia coli. ^@ Brown S.M.|||Budelier K.A.|||Gasser C.S.|||Gunning D.A.
http://togogenome.org/gene/4081:LOC101261182 ^@ http://purl.uniprot.org/uniprot/A0A3Q7FBC6 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:amadh2 ^@ http://purl.uniprot.org/uniprot/B6ECN9 ^@ 23408433 ^@ J. Biol. Chem. ^@ Plant ALDH10 family: identifying critical residues for substrate specificity and trapping a thiohemiacetal intermediate. ^@ Koncitikova R.|||Kopecny D.|||Morera S.|||Moskalikova H.|||Sebela M.|||Soural M.|||Tylichova M.|||Vigouroux A.
http://togogenome.org/gene/4081:LyesC2p008 ^@ http://purl.uniprot.org/uniprot/A0A0C5CEF2|||http://purl.uniprot.org/uniprot/Q2MIC2 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:eIF(iso)4E ^@ http://purl.uniprot.org/uniprot/A0A3Q7I7R4 ^@ 20593023|||22242134 ^@ PLoS ONE ^@ An induced mutation in tomato eIF4E leads to immunity to two potyviruses.|||Knock-down of both eIF4E1 and eIF4E2 genes confers broad-spectrum resistance against potyviruses in tomato. ^@ Bendahmane A.|||Caranta C.|||Flamain F.|||Mazier M.|||Minoia S.|||Moretti A.|||Nicolai M.|||Piednoir E.|||Piron F.|||Salgues A.|||Sarnette V.|||Zamir D.
http://togogenome.org/gene/4081:CycA2 ^@ http://purl.uniprot.org/uniprot/Q9XGI4 ^@ 10987563 ^@ Planta ^@ Molecular characterization of the expression of distinct classes of cyclins during the early development of tomato fruit. ^@ Chevalier C.|||Joubes J.|||Raymond P.|||Walsh D.
http://togogenome.org/gene/4081:krp2 ^@ http://purl.uniprot.org/uniprot/Q8GT28 ^@ 16407228 ^@ J Biol Chem|||J. Biol. Chem. ^@ Cyclin-dependent kinase (CDK) inhibitors regulate the CDK-cyclin complex activities in endoreduplicating cells of developing tomato fruit. ^@ Bisbis B.|||Chevalier C.|||Delmas F.|||Hernould M.|||Inze D.|||Joubes J.|||Mouras A.|||Sicard A.
http://togogenome.org/gene/4081:Coi1 ^@ http://purl.uniprot.org/uniprot/Q6TDU2 ^@ 14688297 ^@ Plant Cell ^@ The tomato homolog of CORONATINE-INSENSITIVE1 is required for the maternal control of seed maturation, jasmonate-signaled defense responses, and glandular trichome development. ^@ Howe G.A.|||Li L.|||McCaig B.C.|||Pichersky E.|||Wang J.|||Whalon M.E.|||Wingerd B.A.|||Zhao Y.
http://togogenome.org/gene/4081:psi14B ^@ http://purl.uniprot.org/uniprot/Q8GRL8 ^@ 12702022 ^@ Physiol Plant|||Physiol. Plantarum ^@ Differential expression of the LePS2 phosphatase gene family in response to phosphate availability, pathogen infection and during development. ^@ Bosse D.|||Hertel S.C.|||Kock M.|||Schurath J.|||Stenzel I.|||Ziethe K.
http://togogenome.org/gene/4081:TPLD ^@ http://purl.uniprot.org/uniprot/Q9FR61 ^@ 11319019 ^@ Physiol Plant|||Physiol. Plantarum ^@ Cloning, characterization and functional expression of a phospholipase Dalpha cDNA from tomato fruit. ^@ Green K.C.|||Smith D.L.|||Whitaker B.D.
http://togogenome.org/gene/4081:CURL3 ^@ http://purl.uniprot.org/uniprot/Q8GUQ5 ^@ 12060717|||12468734 ^@ Plant Cell|||Proc. Natl. Acad. Sci. U.S.A. ^@ Cloning the tomato curl3 gene highlights the putative dual role of the leucine-rich repeat receptor kinase tBRI1/SR160 in plant steroid hormone and peptide hormone signaling.|||The systemin receptor SR160 from Lycopersicon peruvianum is a member of the LRR receptor kinase family. ^@ Bishop G.J.|||Farrar K.|||Kaneta T.|||Montoya T.|||Nomura T.|||Ryan C.A. Jr.|||Scheer J.M.|||Yokota T.
http://togogenome.org/gene/4081:LOC101258234 ^@ http://purl.uniprot.org/uniprot/A0A3Q7FH31 ^@ 32167545 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ A Group of O-Acetyltransferases Catalyze Xyloglucan Backbone Acetylation and Can Alter Xyloglucan Xylosylation Pattern and Plant Growth When Expressed in Arabidopsis.|||A group of O-acetyltransferases catalyze xyloglucan backbone acetylation and can alter xyloglucan xylosylation pattern and plant growth when expressed in Arabidopsis. ^@ Cui D.|||Phillips D.R.|||Richardson E.A.|||Ye Z.H.|||Zhong R.
http://togogenome.org/gene/4081:Asr4 ^@ http://purl.uniprot.org/uniprot/Q2QJT5 ^@ 16822623 ^@ Gene ^@ Evolutionary history of the Asr gene family. ^@ Carrari F.|||Frankel N.|||Hasson E.|||Iusem N.D.
http://togogenome.org/gene/4081:ERF4 ^@ http://purl.uniprot.org/uniprot/Q84XB0 ^@ 12935902 ^@ FEBS Lett. ^@ New members of the tomato ERF family show specific expression pattern and diverse DNA-binding capacity to the GCC box element. ^@ Bouzayen M.|||Jones B.|||Latche A.|||Pech J.-C.|||Pesquet E.|||Regad F.|||Sanchez-Ballesta M.T.|||Tournier B.
http://togogenome.org/gene/4081:LOC544256 ^@ http://purl.uniprot.org/uniprot/Q8H279 ^@ 13677468 ^@ Plant Mol Biol|||Plant Mol. Biol. ^@ MADS-box genes expressed during tomato seed and fruit development. ^@ Boggio S.B.|||Busi M.V.|||Bustamante C.|||D'Angelo C.|||Hidalgo-Cuevas M.|||Valle E.M.|||Zabaleta E.
http://togogenome.org/gene/4081:CycA3 ^@ http://purl.uniprot.org/uniprot/Q9XGI3 ^@ 10987563 ^@ Planta ^@ Molecular characterization of the expression of distinct classes of cyclins during the early development of tomato fruit. ^@ Chevalier C.|||Joubes J.|||Raymond P.|||Walsh D.
http://togogenome.org/gene/4081:LOC544234 ^@ http://purl.uniprot.org/uniprot/Q71LX7 ^@ 15355352 ^@ Eur. J. Biochem. ^@ Expression in yeast of a novel phospholipase A1 cDNA from Arabidopsis thaliana. ^@ Banas A.|||Benveniste P.|||Bouvier-Nave P.|||Noiriel A.|||Stymne S.
http://togogenome.org/gene/4081:LyesC2p013 ^@ http://purl.uniprot.org/uniprot/A0A0C5C9W4|||http://purl.uniprot.org/uniprot/Q2MI46 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:EIL4 ^@ http://purl.uniprot.org/uniprot/Q76DI3 ^@ 14623944 ^@ J Exp Bot|||J. Exp. Bot. ^@ Characterization of a novel tomato EIN3-like gene (LeEIL4). ^@ Inaba A.|||Kubo Y.|||Nakano R.|||Tamura S.|||Yokotani N.
http://togogenome.org/gene/4081:PIN4 ^@ http://purl.uniprot.org/uniprot/E5KGD4 ^@ 22211518 ^@ Plant J|||Plant J. ^@ Evaluating auxin distribution in tomato (Solanum lycopersicum) through an analysis of the PIN and AUX/LAX gene families. ^@ Catala C.|||Pattison R.J.
http://togogenome.org/gene/4081:AIM1 ^@ http://purl.uniprot.org/uniprot/C0J8F7 ^@ 19143995 ^@ Plant J|||Plant J. ^@ Cross-talk between biotic and abiotic stress responses in tomato is mediated by the AIM1 transcription factor.|||Crosstalk between biotic and abiotic stress responses in tomato is mediated by the AIM1 transcription factor. ^@ Abuqamar S.|||Laluk K.|||Luo H.|||Mengiste T.|||Mickelbart M.V.
http://togogenome.org/gene/4081:AN34 ^@ http://purl.uniprot.org/uniprot/O81536 ^@ 9857021 ^@ J Biol Chem|||J. Biol. Chem. ^@ Biochemical characterization of tomato annexin p35. Independence of calcium binding and phosphatase activities. ^@ Bowles D.J.|||Lim E.K.|||Roberts M.R.
http://togogenome.org/gene/4081:GMP ^@ http://purl.uniprot.org/uniprot/Q6J1L7 ^@ 16939010 ^@ Yi Chuan Xue Bao ^@ Cloning, expression, and mapping of GDP-D-mannose pyrophosphorylase cDNA from tomato (Lycopersicon esculentum). ^@ Li H.X.|||Ouyang B.|||Ye Z.B.|||Zhang J.H.|||Zou L.P.
http://togogenome.org/gene/4081:LOC101254200 ^@ http://purl.uniprot.org/uniprot/A0A3Q7GDB0 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:SlIAA27 ^@ http://purl.uniprot.org/uniprot/G9HPX1 ^@ 22368074 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ Genome-Wide Identification, Functional Analysis and Expression Profiling of the Aux/IAA Gene Family in Tomato.|||Genome-wide identification, functional analysis and expression profiling of the Aux/IAA gene family in tomato. ^@ Audran-Delalande C.|||Bassa C.|||Bouzayen M.|||Mila I.|||Regad F.|||Zouine M.
http://togogenome.org/gene/4081:SUT4 ^@ http://purl.uniprot.org/uniprot/K4BUD3 ^@ 24833026 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ The sugar transporter inventory of tomato: genome-wide identification and expression analysis. ^@ Akiyama M.|||Aoki K.|||Koh A.|||Makino H.|||Reuscher S.|||Shibata D.|||Shiratake K.|||Yasuda T.
http://togogenome.org/gene/4081:LOC101257611 ^@ http://purl.uniprot.org/uniprot/K4B3H5 ^@ 29291230 ^@ Virusdisease ^@ Identification of host cellular targets of AC4 and AV2 proteins of tomato leaf curl palampur virus and their sub-cellular localization studies. ^@ Hallan V.|||Kulshreshtha A.|||Roshan P.
http://togogenome.org/gene/4081:LOC100736472 ^@ http://purl.uniprot.org/uniprot/F6KQN4 ^@ 21398570 ^@ Plant Cell ^@ Transcriptome and Metabolite Profiling Show That APETALA2a Is a Major Regulator of Tomato Fruit Ripening.|||Transcriptome and metabolite profiling show that APETALA2a is a major regulator of tomato fruit ripening. ^@ Angenent G.C.|||Baxter C.|||Busscher-Lange J.|||Do P.T.|||Fernie A.R.|||Fraser P.D.|||Karlova R.|||Parapunova V.|||Rosin F.M.|||de Maagd R.A.
http://togogenome.org/gene/4081:SAM1 ^@ http://purl.uniprot.org/uniprot/P43280 ^@ 8018871 ^@ Plant Mol. Biol. ^@ Differential accumulation of S-adenosylmethionine synthetase transcripts in response to salt stress. ^@ Espartero J.|||Pardo J.M.|||Pintor-Toro J.A.
http://togogenome.org/gene/4081:LOC101252585 ^@ http://purl.uniprot.org/uniprot/K4BWG3 ^@ 26070456 ^@ BMC Plant Biol|||BMC Plant Biol. ^@ Tomato Sl3-MMP, a member of the Matrix metalloproteinase family, is required for disease resistance against Botrytis cinerea and Pseudomonas syringae pv. tomato DC3000. ^@ Hong Y.|||Huang L.|||Li D.|||Liu S.|||Song F.|||Song Q.|||Wang L.|||Zhang H.
http://togogenome.org/gene/4081:MPK2 ^@ http://purl.uniprot.org/uniprot/Q84MI5 ^@ 12913131 ^@ Plant Physiol|||Plant Physiol. ^@ Convergence of signaling pathways induced by systemin, oligosaccharide elicitors, and ultraviolet-B radiation at the level of mitogen-activated protein kinases in Lycopersicon peruvianum suspension-cultured cells. ^@ Holley S.R.|||Moura D.S.|||Ryan C.A.|||Stratmann J.W.|||Yalamanchili R.D.
http://togogenome.org/gene/4081:LOC778322 ^@ http://purl.uniprot.org/uniprot/Q53U34 ^@ 20350329 ^@ BMC Genomics ^@ Large-scale analysis of full-length cDNAs from the tomato (Solanum lycopersicum) cultivar Micro-Tom, a reference system for the Solanaceae genomics. ^@ Aoki K.|||Arie T.|||Egusa M.|||Ezura H.|||Fukushima S.|||Ichinose Y.|||Kawamura S.|||Kikuchi M.|||Kodama M.|||Kohara Y.|||Kurabayashi A.|||Narita T.|||Okabe A.|||Omura T.|||Ooga K.|||Sakurai N.|||Sato Y.|||Satoh S.|||Shibata D.|||Shin-I T.|||Shin-i T.|||Suda K.|||Suzuki A.|||Suzuki T.|||Takahashi H.|||Torii M.|||Tsugane T.|||Watanabe M.|||Watanabe Y.|||Yamamoto N.|||Yano K.|||Yazawa K.
http://togogenome.org/gene/4081:Man4 ^@ http://purl.uniprot.org/uniprot/Q8L5J1 ^@ 12427992|||15840830|||16649044 ^@ Plant Physiol.|||Planta|||Protein Sci. ^@ LeMAN4 endo-beta-mannanase from ripe tomato fruit can act as a mannan transglycosylase or hydrolase.|||Three-dimensional structure of (1,4)-beta-D-mannan mannanohydrolase from tomato fruit.|||Variation in its C-terminal amino acids determines whether endo-beta-mannanase is active or inactive in ripening tomato fruits of different cultivars. ^@ Atkinson R.G.|||Bewley J.D.|||Bourgault R.|||Oakley A.J.|||Schroeder R.|||Sharma N.N.|||Wegrzyn T.F.|||Wilce M.C.J.
http://togogenome.org/gene/4081:OVATE ^@ http://purl.uniprot.org/uniprot/Q8GSM4 ^@ 12242331 ^@ Proc Natl Acad Sci U S A|||Proc. Natl. Acad. Sci. U.S.A. ^@ A new class of regulatory genes underlying the cause of pear-shaped tomato fruit. ^@ Cong B.|||Liu J.|||Tanksley S.D.|||Van Eck J.
http://togogenome.org/gene/4081:LyesC2p065 ^@ http://purl.uniprot.org/uniprot/A0A0U1ZGE8|||http://purl.uniprot.org/uniprot/Q2MI96 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:PT4 ^@ http://purl.uniprot.org/uniprot/Q563I3 ^@ 15807785 ^@ Plant J|||Plant J. ^@ The characterization of novel mycorrhiza-specific phosphate transporters from Lycopersicon esculentum and Solanum tuberosum uncovers functional redundancy in symbiotic phosphate transport in solanaceous species. ^@ Amrhein N.|||Bucher M.|||Chague V.|||Jakobsen I.|||Kalinkevich K.|||Karandashov V.|||Levy A.A.|||Nagy R.|||Tamasloukht M.|||Xu G.
http://togogenome.org/gene/4081:LOC101265413 ^@ http://purl.uniprot.org/uniprot/A0A3Q7FPS6 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:LOC101261290 ^@ http://purl.uniprot.org/uniprot/A0A3Q7F3F2 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:LOC101244831 ^@ http://purl.uniprot.org/uniprot/A0A0C6G3Q8 ^@ 25217510 ^@ Plant Cell ^@ Sterol side chain reductase 2 is a key enzyme in the biosynthesis of cholesterol, the common precursor of toxic steroidal glycoalkaloids in potato. ^@ Aoki T.|||Kojima M.|||Muranaka T.|||Ohyama K.|||Saito K.|||Sakakibara H.|||Sakuma T.|||Sawai S.|||Seki H.|||Takebayashi Y.|||Umemoto N.|||Yamamoto T.|||Yasumoto S.
http://togogenome.org/gene/4081:2A11 ^@ http://purl.uniprot.org/uniprot/P14903 ^@ 2491680 ^@ Plant Mol. Biol. ^@ Isolation and characterization of a fruit-specific cDNA and the corresponding genomic clone from tomato. ^@ Houck C.M.|||Pear J.R.|||Rasmussen R.|||Ridge N.P.|||Rose R.E.
http://togogenome.org/gene/4081:FUT13 ^@ http://purl.uniprot.org/uniprot/Q8VXF9 ^@ 12084979 ^@ Glycoconj J|||Glycoconj. J. ^@ Identification of a cDNA encoding a plant Lewis-type alpha1,4-fucosyltransferase. ^@ Wilson I.B.
http://togogenome.org/gene/4081:LecRK ^@ http://purl.uniprot.org/uniprot/K4B7G2|||http://purl.uniprot.org/uniprot/K4BK85|||http://purl.uniprot.org/uniprot/K4BT92 ^@ 26248665 ^@ J Exp Bot|||J. Exp. Bot. ^@ L-type lectin receptor kinases in Nicotiana benthamiana and tomato and their role in Phytophthora resistance. ^@ Bouwmeester K.|||Govers F.|||Wang Y.|||Weide R.
http://togogenome.org/gene/4081:SlIAA8 ^@ http://purl.uniprot.org/uniprot/G9HPV7 ^@ 22368074 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ Genome-Wide Identification, Functional Analysis and Expression Profiling of the Aux/IAA Gene Family in Tomato.|||Genome-wide identification, functional analysis and expression profiling of the Aux/IAA gene family in tomato. ^@ Audran-Delalande C.|||Bassa C.|||Bouzayen M.|||Mila I.|||Regad F.|||Zouine M.
http://togogenome.org/gene/4081:LOC544102 ^@ http://purl.uniprot.org/uniprot/Q6LB28 ^@ 21900168 ^@ J Virol|||J. Virol. ^@ Histone H3 interacts and colocalizes with the nuclear shuttle protein and the movement protein of a geminivirus.|||Histone h3 interacts and colocalizes with the nuclear shuttle protein and the movement protein of a geminivirus. ^@ Gilbertson R.L.|||Lucas W.J.|||Park M.R.|||Rojas M.R.|||Seo Y.S.|||Zhou Y.
http://togogenome.org/gene/4081:LOC101243873 ^@ http://purl.uniprot.org/uniprot/V5YMM2 ^@ 24260152 ^@ PLoS ONE|||PLoS One ^@ Genome-wide identification and expression analysis of aquaporins in tomato. ^@ Akiyama M.|||Aoki K.|||Mori C.|||Reuscher S.|||Shibata D.|||Shiratake K.
http://togogenome.org/gene/4081:LOC101249290 ^@ http://purl.uniprot.org/uniprot/A0A3Q7HSH1 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:AT1 ^@ http://purl.uniprot.org/uniprot/I6TSB7 ^@ 22988115 ^@ Proc Natl Acad Sci U S A|||Proc. Natl. Acad. Sci. U.S.A. ^@ Identification of a BAHD acetyltransferase that produces protective acyl sugars in tomato trichomes. ^@ Charbonneau A.L.|||Last R.L.|||Schilmiller A.L.
http://togogenome.org/gene/4081:LOC544264 ^@ http://purl.uniprot.org/uniprot/Q6ED34 ^@ 15233793 ^@ Eur J Biochem|||Eur. J. Biochem. ^@ Cloning and expression of a tomato cDNA encoding a methyl jasmonate cleaving esterase. ^@ Mueller M.J.|||Stuhlfelder C.|||Warzecha H.
http://togogenome.org/gene/4081:hsp100/ClpB ^@ http://purl.uniprot.org/uniprot/Q4LDR0 ^@ 16912911 ^@ Plant Mol Biol|||Plant Mol. Biol. ^@ The involvement of chloroplast HSP100/ClpB in the acquired thermotolerance in tomato. ^@ Li M.H.|||Liu J.|||Qin J.|||Sun A.Q.|||Sun Y.|||Yang J.Y.|||Yi S.Y.
http://togogenome.org/gene/4081:LOC101258992 ^@ http://purl.uniprot.org/uniprot/A0A3Q7I5D6 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:EXPA4 ^@ http://purl.uniprot.org/uniprot/Q9ZP32 ^@ 10080718 ^@ Plant Mol Biol|||Plant Mol. Biol. ^@ Differential expression of expansin gene family members during growth and ripening of tomato fruit. ^@ Brummell D.A.|||Dunsmuir P.|||Harpster M.H.
http://togogenome.org/gene/4081:PAR2 ^@ http://purl.uniprot.org/uniprot/A6N6K8 ^@ 17644147 ^@ Phytochemistry ^@ Tomato phenylacetaldehyde reductases catalyze the last step in the synthesis of the aroma volatile 2-phenylethanol. ^@ Clark D.G.|||Kim J.Y.|||Klee H.J.|||Loucas H.M.|||Tieman D.M.
http://togogenome.org/gene/4081:cycd3c2 ^@ http://purl.uniprot.org/uniprot/Q9SMD5 ^@ 11113158 ^@ J Exp Bot|||J. Exp. Bot. ^@ Isolation of three distinct CycD3 genes expressed during fruit development in tomato. ^@ Kvarnheden A.|||Morris B.A.|||O'Brien I.|||Yao J.L.|||Zhan X.
http://togogenome.org/gene/4081:LOC101253145 ^@ http://purl.uniprot.org/uniprot/B1N667 ^@ 18339939 ^@ Science ^@ A retrotransposon-mediated gene duplication underlies morphological variation of tomato fruit. ^@ Jiang N.|||Schaffner E.|||Stockinger E.J.|||Xiao H.|||van der Knaap E.
http://togogenome.org/gene/4081:SPGB ^@ http://purl.uniprot.org/uniprot/A1YTV0 ^@ 11752381|||16606827 ^@ Plant Cell|||Proc Natl Acad Sci U S A|||Proc. Natl. Acad. Sci. U.S.A. ^@ The tomato FT ortholog triggers systemic signals that regulate growth and flowering and substitute for diverse environmental stimuli.|||Tomato SP-interacting proteins define a conserved signaling system that regulates shoot architecture and flowering. ^@ Adir N.|||Alvarez J.P.|||Amsellem Z.|||Ben-Naim O.|||Eshed Y.|||Eviatar T.|||Goldshmidt A.|||Gutfinger T.|||Hareven D.|||Lifschitz E.|||Pnueli L.|||Ron N.|||Rozman A.|||Shalit A.
http://togogenome.org/gene/4081:AGO1B ^@ http://purl.uniprot.org/uniprot/K4NPL2 ^@ 23080016 ^@ Planta ^@ The developmental outcomes of P0-mediated ARGONAUTE destabilization in tomato. ^@ Arazi T.|||Hendelman A.|||Kravchik M.|||Lugassi N.|||Stav R.|||Zik M.
http://togogenome.org/gene/4081:LOC544081 ^@ http://purl.uniprot.org/uniprot/P35057 ^@ 7764315 ^@ Planta ^@ The pattern of histone H4 expression in the tomato shoot apex changes during development. ^@ Brandstaedter J.U.|||Rossbach C.|||Thers K.
http://togogenome.org/gene/4081:TDR8 ^@ http://purl.uniprot.org/uniprot/A0A0B4N0Q9 ^@ 25433802 ^@ BMC Plant Biol|||BMC Plant Biol. ^@ Characterization of TM8, a MADS-box gene expressed in tomato flowers. ^@ Casadoro G.|||Daminato M.|||Lovisetto A.|||Masiero S.|||Resentini F.
http://togogenome.org/gene/4081:TPS39 ^@ http://purl.uniprot.org/uniprot/G5CV39 ^@ 21813655 ^@ Plant Physiol. ^@ The tomato terpene synthase gene family. ^@ Akhtar T.A.|||Bleeker P.M.|||Bonini M.E.|||Falara V.|||Last R.L.|||Matsuba Y.|||Nguyen T.T.|||Nguyen T.T.H.|||Pichersky E.|||Schauvinhold I.|||Schilmiller A.L.|||Schuurink R.C.|||Spyropoulou E.A.
http://togogenome.org/gene/4081:VGT2 ^@ http://purl.uniprot.org/uniprot/K4BJB3 ^@ 24833026 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ The sugar transporter inventory of tomato: genome-wide identification and expression analysis. ^@ Akiyama M.|||Aoki K.|||Koh A.|||Makino H.|||Reuscher S.|||Shibata D.|||Shiratake K.|||Yasuda T.
http://togogenome.org/gene/4081:LOC101258434 ^@ http://purl.uniprot.org/uniprot/V5YN09 ^@ 24260152 ^@ PLoS ONE|||PLoS One ^@ Genome-wide identification and expression analysis of aquaporins in tomato. ^@ Akiyama M.|||Aoki K.|||Mori C.|||Reuscher S.|||Shibata D.|||Shiratake K.
http://togogenome.org/gene/4081:LOC101266186 ^@ http://purl.uniprot.org/uniprot/K4D9D2 ^@ 27909045 ^@ Plant Physiol|||Plant Physiol. ^@ A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity. ^@ Chen X.|||Connor R.A.|||Gough J.|||Martin G.B.|||Mural R.V.|||Oates M.E.|||Zeng L.|||Zhou B.
http://togogenome.org/gene/4081:LOC100301981 ^@ http://purl.uniprot.org/uniprot/C4NFG1 ^@ 19357433 ^@ J Exp Bot|||J. Exp. Bot. ^@ Over-expression of a tomato N-acetyl-L-glutamate synthase gene (SlNAGS1) in Arabidopsis thaliana results in high ornithine levels and increased tolerance in salt and drought stresses. ^@ Aggelis A.|||Alexandrou D.|||Carrillo-Lopez A.|||Fotopoulos V.|||Kalamaki M.S.|||Kanellis A.K.|||Lazari D.|||Merkouropoulos G.|||Pateraki I.|||Rubio-Cabetas M.J.
http://togogenome.org/gene/4081:LOC101247051 ^@ http://purl.uniprot.org/uniprot/K4CNR9 ^@ 29340223 ^@ Acta Naturae ^@ YABBY3-Orthologous Genes in Wild Tomato Species: Structure, Variability, and Expression. ^@ Filyushin M.A.|||Kochieva E.Z.|||Shchennikova A.V.|||Slugina M.A.
http://togogenome.org/gene/4081:LOC543739 ^@ http://purl.uniprot.org/uniprot/Q9XG51 ^@ 11741041 ^@ J Exp Bot|||J. Exp. Bot. ^@ Regulation of expression of two novel flower-specific genes from tomato (Solanum lycopersicum) by gibberellin. ^@ Barendse G.W.|||Van Lipzig R.H.|||Van den Heuvel K.J.|||Wullems G.J.
http://togogenome.org/gene/4081:LyesC2p038 ^@ http://purl.uniprot.org/uniprot/A0A0C5CUT9|||http://purl.uniprot.org/uniprot/Q2MI69 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LOC543607 ^@ http://purl.uniprot.org/uniprot/Q9SEE4 ^@ 11485202 ^@ Plant Mol. Biol. ^@ A tomato homologue of the human protein PIRIN is induced during programmed cell death. ^@ Orzaez D.|||Woltering E.J.|||de Jong A.J.
http://togogenome.org/gene/4081:TPS33 ^@ http://purl.uniprot.org/uniprot/G5CV44 ^@ 21813655 ^@ Plant Physiol. ^@ The tomato terpene synthase gene family. ^@ Akhtar T.A.|||Bleeker P.M.|||Bonini M.E.|||Falara V.|||Last R.L.|||Matsuba Y.|||Nguyen T.T.|||Nguyen T.T.H.|||Pichersky E.|||Schauvinhold I.|||Schilmiller A.L.|||Schuurink R.C.|||Spyropoulou E.A.
http://togogenome.org/gene/4081:RAN1 ^@ http://purl.uniprot.org/uniprot/P38546 ^@ 8016079 ^@ Proc. Natl. Acad. Sci. U.S.A. ^@ A small nuclear GTP-binding protein from tomato suppresses a Schizosaccharomyces pombe cell-cycle mutant. ^@ Ach R.A.|||Gruissem W.
http://togogenome.org/gene/4081:Asr2 ^@ http://purl.uniprot.org/uniprot/Q40165 ^@ 7626782|||8165244 ^@ DNA Seq|||DNA Seq.|||Plant Physiol|||Plant Physiol. ^@ Sequence of Asr2, a member of a gene family from Lycopersicon esculentum encoding chromosomal proteins: homology to an intron of the polygalacturonase gene.|||Tomato (Lycopersicon esculentum) genomic clone homologous to a gene encoding an abscisic acid-induced protein. ^@ Iusem N.D.|||Rossi M.
http://togogenome.org/gene/4081:Dem2 ^@ http://purl.uniprot.org/uniprot/Q6VVW7 ^@ 9634577 ^@ Plant Cell ^@ Transposon tagging of the Defective embryo and meristems gene of tomato. ^@ Carroll B.J.|||Gruissem W.|||Holtan H.|||Jones J.D.|||Keddie J.S.|||Klimyuk V.|||Reyes M.E.|||Thomas C.M.
http://togogenome.org/gene/4081:LOC100316898 ^@ http://purl.uniprot.org/uniprot/D0QU16 ^@ 19819901 ^@ J Biochem|||J. Biochem. ^@ Molecular identification and characterization of an acidic peptide:N-glycanase from tomato (Lycopersicum esculentum) fruits. ^@ Hossain M.A.|||Kimura Y.|||Nakamura K.|||Nakano R.
http://togogenome.org/gene/4081:LOC101252637 ^@ http://purl.uniprot.org/uniprot/K4B1I0 ^@ 27579028 ^@ Front Plant Sci|||Front. Plant Sci. ^@ Genome-Wide Study of the Tomato SlMLO Gene Family and Its Functional Characterization in Response to the Powdery Mildew Fungus Oidium neolycopersici. ^@ Appiano M.|||Bai Y.|||Bracuto V.|||Pavan S.|||Ricciardi L.|||Visser R.G.|||Wolters A.M.|||Zheng Z.
http://togogenome.org/gene/4081:SlLAX1 ^@ http://purl.uniprot.org/uniprot/F8SS62 ^@ 22211518 ^@ Plant J|||Plant J. ^@ Evaluating auxin distribution in tomato (Solanum lycopersicum) through an analysis of the PIN and AUX/LAX gene families. ^@ Catala C.|||Pattison R.J.
http://togogenome.org/gene/4081:CS2 ^@ http://purl.uniprot.org/uniprot/Q42885 ^@ 8251624 ^@ Plant Mol. Biol. ^@ Differential expression of tomato (Lycopersicon esculentum L.) genes encoding shikimate pathway isoenzymes. II. Chorismate synthase. ^@ Amrheim N.|||Goerlach J.|||Schmid J.
http://togogenome.org/gene/4081:TPG6 ^@ http://purl.uniprot.org/uniprot/O22610 ^@ 9669329 ^@ Mol Gen Genet|||Mol. Gen. Genet. ^@ Genomic organization of six tomato polygalacturonases and 5' upstream sequence identity with tap1 and win2 genes. ^@ Hong S.B.|||Tucker M.L.
http://togogenome.org/gene/4081:LOC101055609 ^@ http://purl.uniprot.org/uniprot/H6WYS2 ^@ 22685081 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ A novel in-gel assay and an improved kinetic assay for determining in vitro sulfite reductase activity in plants. ^@ Brychkova G.|||Sagi M.|||Ventura Y.|||Yarmolinsky D.
http://togogenome.org/gene/4081:ChrC ^@ http://purl.uniprot.org/uniprot/Q0ZPA3 ^@ 16815957 ^@ Plant Physiol|||Plant Physiol. ^@ Expression and functional analyses of the plastid lipid-associated protein CHRC suggest its role in chromoplastogenesis and stress. ^@ Elad Y.|||Leitner-Dagan Y.|||Ovadis M.|||Rav David D.|||Shklarman E.|||Vainstein A.
http://togogenome.org/gene/4081:LOC101250523 ^@ http://purl.uniprot.org/uniprot/Q07446 ^@ 8029340 ^@ Plant Physiol|||Plant Physiol. ^@ Nucleotide sequences of two peroxidase genes from tomato (Lycopersicon esculentum). ^@ Botella M.A.|||Hasegawa P.M.|||Quesada M.A.|||Valpuesta V.
http://togogenome.org/gene/4081:LyesC2p025 ^@ http://purl.uniprot.org/uniprot/Q2MI39 ^@ 16575560|||16830097 ^@ J. Mol. Evol.|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.
http://togogenome.org/gene/4081:LOC543974 ^@ http://purl.uniprot.org/uniprot/P07179 ^@ 3012537|||3478552|||3557127|||8425051 ^@ Gene|||Mol. Gen. Genet.|||Plant Mol. Biol.|||Proc. Natl. Acad. Sci. U.S.A. ^@ Developmental and organ-specific changes in DNA-protein interactions in the tomato rbcS1, rbcS2 and rbcS3A promoter regions.|||Evidence for selection as a mechanism in the concerted evolution of Lycopersicon esculentum (tomato) genes encoding the small subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase.|||Genomic organization, sequence analysis and expression of all five genes encoding the small subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase from tomato.|||Nucleotide sequence and molecular evolution of two tomato genes encoding the small subunit of ribulose-1,5-bisphosphate carboxylase. ^@ Alexander D.C.|||Babcock M.S.|||Bernatzky R.|||Carrasco P.|||Cashmore A.|||Cashmore A.R.|||Gruissem W.|||Manzara T.|||McKnight T.D.|||Pichersky E.|||Simpson R.B.|||Sugita M.|||Tanksley S.D.
http://togogenome.org/gene/4081:LOC101254351 ^@ http://purl.uniprot.org/uniprot/Q9FYX4 ^@ 10908680 ^@ Proc Natl Acad Sci U S A|||Proc. Natl. Acad. Sci. U.S.A. ^@ Comparing sequenced segments of the tomato and Arabidopsis genomes: large-scale duplication followed by selective gene loss creates a network of synteny. ^@ Ku H.M.|||Liu J.|||Tanksley S.D.|||Vision T.
http://togogenome.org/gene/4081:LOX1.1 ^@ http://purl.uniprot.org/uniprot/P38415 ^@ 7972514 ^@ Plant Physiol. ^@ The cloning of two tomato lipoxygenase genes and their differential expression during fruit ripening. ^@ Beaudoin N.|||Bowsher C.G.|||Burkhart W.|||Ferrie B.J.|||Rothstein S.J.
http://togogenome.org/gene/4081:XOPG1 ^@ http://purl.uniprot.org/uniprot/Q9M7D3 ^@ 10517833 ^@ Plant Physiol|||Plant Physiol. ^@ Expression of a polygalacturonase associated with tomato seed germination. ^@ Bennett A.B.|||Bradford K.J.|||Downie A.B.|||Hadfield K.A.|||Sitrit Y.
http://togogenome.org/gene/4081:LyesC2p069 ^@ http://purl.uniprot.org/uniprot/A0A0C5CUR3|||http://purl.uniprot.org/uniprot/Q2MIA0 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:PDF1A ^@ http://purl.uniprot.org/uniprot/Q9FUZ0 ^@ 11060042 ^@ EMBO J. ^@ Identification of eukaryotic peptide deformylases reveals universality of N-terminal protein processing mechanisms. ^@ Boisson B.|||Giglione C.|||Meinnel T.|||Pierre M.|||Serero A.
http://togogenome.org/gene/4081:LOC101247803 ^@ http://purl.uniprot.org/uniprot/K4BKG3 ^@ 27909045 ^@ Plant Physiol|||Plant Physiol. ^@ A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity. ^@ Chen X.|||Connor R.A.|||Gough J.|||Martin G.B.|||Mural R.V.|||Oates M.E.|||Zeng L.|||Zhou B.
http://togogenome.org/gene/4081:LOC101255953 ^@ http://purl.uniprot.org/uniprot/A0A6G8RR85 ^@ 32167545 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ A Group of O-Acetyltransferases Catalyze Xyloglucan Backbone Acetylation and Can Alter Xyloglucan Xylosylation Pattern and Plant Growth When Expressed in Arabidopsis.|||A group of O-acetyltransferases catalyze xyloglucan backbone acetylation and can alter xyloglucan xylosylation pattern and plant growth when expressed in Arabidopsis. ^@ Cui D.|||Phillips D.R.|||Richardson E.A.|||Ye Z.H.|||Zhong R.
http://togogenome.org/gene/4081:LOC101248302 ^@ http://purl.uniprot.org/uniprot/A0A3Q7GRY8 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:LOC101252219 ^@ http://purl.uniprot.org/uniprot/A0A3Q7J0J5 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:LOC544263 ^@ http://purl.uniprot.org/uniprot/Q6TFM2 ^@ 15107504 ^@ Plant Physiol. ^@ Folate biosynthesis in higher plants. cDNA cloning, heterologous expression, and characterization of dihydroneopterin aldolases. ^@ Bacher A.|||Fischer M.|||Goyer A.|||Hanson A.D.|||Illarionova V.|||Roje S.
http://togogenome.org/gene/4081:CBL1 ^@ http://purl.uniprot.org/uniprot/G5EM33 ^@ 25477139 ^@ Cell Calcium ^@ Increasing complexity and versatility: How the calcium signaling toolkit was shaped during plant land colonization.|||Increasing complexity and versatility: how the calcium signaling toolkit was shaped during plant land colonization. ^@ Edel K.H.|||Kudla J.
http://togogenome.org/gene/4081:spy ^@ http://purl.uniprot.org/uniprot/Q8RVB2 ^@ 12147734 ^@ J. Exp. Bot. ^@ Isolation and characterization of the Spindly homologue from tomato. ^@ Greb T.|||Schmitz G.|||Theres K.
http://togogenome.org/gene/4081:VGT1 ^@ http://purl.uniprot.org/uniprot/K4BHN0 ^@ 24833026 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ The sugar transporter inventory of tomato: genome-wide identification and expression analysis. ^@ Akiyama M.|||Aoki K.|||Koh A.|||Makino H.|||Reuscher S.|||Shibata D.|||Shiratake K.|||Yasuda T.
http://togogenome.org/gene/4081:CS1 ^@ http://purl.uniprot.org/uniprot/Q42884 ^@ 8251624 ^@ Plant Mol. Biol. ^@ Differential expression of tomato (Lycopersicon esculentum L.) genes encoding shikimate pathway isoenzymes. II. Chorismate synthase. ^@ Amrheim N.|||Goerlach J.|||Schmid J.
http://togogenome.org/gene/4081:LOC543899 ^@ http://purl.uniprot.org/uniprot/Q6V7U8 ^@ 12897245 ^@ Plant Cell ^@ Activation tagging in tomato identifies a transcriptional regulator of anthocyanin biosynthesis, modification, and transport. ^@ Caldwell C.G.|||Clendennen S.K.|||Connors K.|||Lightner J.|||Liu X.L.|||Matheis N.|||Mathews H.|||Menasco D.J.|||Schuster D.K.|||Wagner D.R.|||Wagoner W.
http://togogenome.org/gene/4081:MSI1 ^@ http://purl.uniprot.org/uniprot/O22466 ^@ 9338962 ^@ Plant Cell ^@ A conserved family of WD-40 proteins binds to the retinoblastoma protein in both plants and animals. ^@ Ach R.A.|||Gruissem W.|||Taranto P.
http://togogenome.org/gene/4081:SNF4 ^@ http://purl.uniprot.org/uniprot/Q9M727 ^@ 12857836 ^@ Plant Physiol|||Plant Physiol. ^@ Abscisic acid and gibberellin differentially regulate expression of genes of the SNF1-related kinase complex in tomato seeds. ^@ Alvarado V.|||Bradford K.J.|||Dahal P.|||Downie A.B.|||Gee O.H.|||Yang H.
http://togogenome.org/gene/4081:LOC101247650 ^@ http://purl.uniprot.org/uniprot/O49879 ^@ 22307647|||26912238|||9413991 ^@ BMC Plant Biol.|||Cell|||Proc. Natl. Acad. Sci. U.S.A. ^@ Mapping and candidate gene screening of tomato Cladosporium fulvum-resistant gene Cf-19, based on high-throughput sequencing technology.|||MicroRNA regulation of plant innate immune receptors.|||Novel disease resistance specificities result from sequence exchange between tandemly repeated genes at the Cf-4/9 locus of tomato. ^@ Baker B.|||Bendix C.|||Brunkard J.O.|||Chen X.|||Cohn M.M.|||Golstein C.|||Hammond-Kosack K.E.|||Harrison K.|||He S.|||Jiang J.|||Jones D.A.|||Jones J.D.|||Kumar P.|||Li F.|||Li J.|||Liu G.|||Parniske M.|||Pignatta D.|||Sun H.|||Thomas C.M.|||Tung J.|||Wulff B.B.|||Xu X.|||Zhang H.|||Zhao T.
http://togogenome.org/gene/4081:LyesC2p080 ^@ http://purl.uniprot.org/uniprot/A0A0C5CHB1|||http://purl.uniprot.org/uniprot/Q2MIB1 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:H1 ^@ http://purl.uniprot.org/uniprot/O65820 ^@ 10344194 ^@ Plant Mol. Biol. ^@ Isolation and molecular characterization of gibberellin-regulated H1 and H2B histone cDNAs in the leaf of the gibberellin-deficient tomato. ^@ Barendse G.W.M.|||Wullems G.J.|||van Esch R.J.|||van den Heuvel K.J.P.T.
http://togogenome.org/gene/4081:pGlcT3 ^@ http://purl.uniprot.org/uniprot/A0A060PPW0 ^@ 24833026 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ The sugar transporter inventory of tomato: genome-wide identification and expression analysis. ^@ Akiyama M.|||Aoki K.|||Koh A.|||Makino H.|||Reuscher S.|||Shibata D.|||Shiratake K.|||Yasuda T.
http://togogenome.org/gene/4081:vicilin ^@ http://purl.uniprot.org/uniprot/B0JEU3 ^@ 30973714|||31753489 ^@ ACS Chem Biol|||ACS Chem. Biol.|||Biochem. Biophys. Res. Commun. ^@ An Ancient Peptide Family Buried within Vicilin Precursors.|||Comparative study of 7S globulin from Corylus avellana and Solanum lycopersicum revealed importance of salicylic acid and Cu-binding loop in modulating their function. ^@ Berkowitz O.|||Fisher M.F.|||Jain A.|||Mylne J.S.|||Payne C.D.|||Pouvreau B.|||Rosengren K.J.|||Salunke D.M.|||Schaefer H.|||Shikhi M.|||Taylor N.L.|||Whelan J.|||Zhang J.
http://togogenome.org/gene/4081:MKK3 ^@ http://purl.uniprot.org/uniprot/Q66MH7 ^@ 15371431 ^@ J Biol Chem|||J. Biol. Chem. ^@ Identification of MAPKs and their possible MAPK kinase activators involved in the Pto-mediated defense response of tomato. ^@ Martin G.B.|||Pedley K.F.
http://togogenome.org/gene/4081:CHLN ^@ http://purl.uniprot.org/uniprot/Q9XGI7 ^@ 10359845 ^@ Proc. Natl. Acad. Sci. U.S.A. ^@ Map-based cloning of chloronerva, a gene involved in iron uptake of higher plants encoding nicotianamine synthase. ^@ Baeumlein H.|||Ganal M.W.|||Koch G.|||Ling H.-Q.
http://togogenome.org/gene/4081:TCP12 ^@ http://purl.uniprot.org/uniprot/G3BGV2 ^@ 24903607 ^@ BMC Plant Biol|||BMC Plant Biol. ^@ Identification, cloning and characterization of the tomato TCP transcription factor family. ^@ Angenent G.C.|||Bovy A.G.|||Busscher M.|||Busscher-Lange J.|||Karlova R.|||Lammers M.|||Parapunova V.|||de Maagd R.A.
http://togogenome.org/gene/4081:LyesC2p059 ^@ http://purl.uniprot.org/uniprot/A0A0C5CUS5|||http://purl.uniprot.org/uniprot/Q2MI90 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:MBD5 ^@ http://purl.uniprot.org/uniprot/K4DA31 ^@ 26551231 ^@ New Phytol|||New Phytol. ^@ Tomato MBD5, a methyl CpG binding domain protein, physically interacting with UV-damaged DNA binding protein-1, functions in multiple processes. ^@ Deng H.|||Huang S.|||Li H.|||Li Y.|||Liu Y.|||Miao M.|||Wang S.
http://togogenome.org/gene/4081:lanceolate ^@ http://purl.uniprot.org/uniprot/A2I5C7 ^@ 17486095 ^@ Nat Genet|||Nat. Genet. ^@ Regulation of LANCEOLATE by miR319 is required for compound-leaf development in tomato. ^@ Alvarez J.P.|||Amsellem Z.|||Blum E.|||Brand A.|||Cohen A.R.|||Efroni I.|||Eshed Y.|||Etzioni A.|||Menda N.|||Ori N.|||Pekker I.|||Shleizer S.|||Yanai O.|||Zamir D.
http://togogenome.org/gene/4081:SlArf/Xyl2 ^@ http://purl.uniprot.org/uniprot/H1AC31 ^@ 23782392 ^@ Physiol Plant|||Physiol. Plantarum ^@ Heterologous expression of tomato glycoside hydrolase family 3 ?-L-arabinofuranosidase/?-xylosidases in tobacco suspension cultured cells and synergic action of a family 51 isozyme under antisense suppression of the enzyme.|||Heterologous expression of tomato glycoside hydrolase family 3 alpha-L-arabinofuranosidase/beta-xylosidases in tobacco suspension cultured cells and synergic action of a family 51 isozyme under antisense suppression of the enzyme. ^@ Inoue H.|||Kamiyoshihara Y.|||Kanayama Y.|||Matsuno J.|||Miyohashi F.|||Nomura K.|||Shiba H.|||Tateishi A.|||Watanabe K.
http://togogenome.org/gene/4081:ETR5 ^@ http://purl.uniprot.org/uniprot/Q9XET9 ^@ 10318694 ^@ Plant Physiol|||Plant Physiol. ^@ Differential expression of two novel members of the tomato ethylene-receptor family. ^@ Klee H.J.|||Tieman D.M.
http://togogenome.org/gene/4081:PRO1 ^@ http://purl.uniprot.org/uniprot/Q41344 ^@ 9526502 ^@ Plant Mol. Biol. ^@ Molecular cloning and mRNA localization of tomato pollen profilin. ^@ Nasrallah J.|||Parthasarathy M.V.|||Valenta R.|||Yu L.X.
http://togogenome.org/gene/4081:Fad7 ^@ http://purl.uniprot.org/uniprot/Q7X7I9 ^@ 12837953 ^@ Plant Cell ^@ The tomato suppressor of prosystemin-mediated responses2 gene encodes a fatty acid desaturase required for the biosynthesis of jasmonic acid and the production of a systemic wound signal for defense gene expression. ^@ Bauer P.|||Ganal M.W.|||Howe G.A.|||Lee G.I.|||Li C.|||Ling H.Q.|||Liu G.|||Xu C.
http://togogenome.org/gene/4081:PIN8 ^@ http://purl.uniprot.org/uniprot/E5KGD9 ^@ 22211518 ^@ Plant J|||Plant J. ^@ Evaluating auxin distribution in tomato (Solanum lycopersicum) through an analysis of the PIN and AUX/LAX gene families. ^@ Catala C.|||Pattison R.J.
http://togogenome.org/gene/4081:LOC101266720 ^@ http://purl.uniprot.org/uniprot/A0A3Q7GDM4 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:LOC101259548 ^@ http://purl.uniprot.org/uniprot/K4C8Q3 ^@ 25710821 ^@ Mol Plant Microbe Interact|||Mol. Plant Microbe Interact. ^@ Tomato SOBIR1/EVR Homologs Are Involved in Elicitin Perception and Plant Defense Against the Oomycete Pathogen Phytophthora parasitica. ^@ Huang C.T.|||Liou R.F.|||Peng K.C.|||Wang C.W.|||Wu C.H.
http://togogenome.org/gene/4081:LeDEF ^@ http://purl.uniprot.org/uniprot/Q2UVA8 ^@ 16404954 ^@ Mol Plant Microbe Interact|||Mol. Plant Microbe Interact. ^@ Tomato flower abnormalities induced by stolbur phytoplasma infection are associated with changes of expression of floral development genes. ^@ Eveillard S.|||Hernould M.|||Mouras A.|||Pracros P.|||Renaudin J.
http://togogenome.org/gene/4081:GolS-1 ^@ http://purl.uniprot.org/uniprot/Q947G8 ^@ 12644684 ^@ Plant Physiol. ^@ Expression of a GALACTINOL SYNTHASE gene in tomato seeds is up-regulated before maturation desiccation and again after imbibition whenever radicle protrusion is prevented. ^@ Alvarado V.|||Bradford K.J.|||Dahal P.|||Downie B.|||Fukanaga K.|||Gurusinghe S.|||Nonogaki H.|||Snyder J.C.|||Thacker R.R.|||Yim K.
http://togogenome.org/gene/4081:TBG6 ^@ http://purl.uniprot.org/uniprot/Q9LLS9 ^@ 10889266 ^@ Plant Physiol|||Plant Physiol. ^@ A family of at least seven beta-galactosidase genes is expressed during tomato fruit development. ^@ Gross K.C.|||Smith D.L.
http://togogenome.org/gene/4081:EXPA8 ^@ http://purl.uniprot.org/uniprot/Q9FVH0 ^@ 11080302 ^@ Plant Physiol|||Plant Physiol. ^@ Expression of an expansin is associated with endosperm weakening during tomato seed germination. ^@ Bradford K.J.|||Chen F.
http://togogenome.org/gene/4081:wee1 ^@ http://purl.uniprot.org/uniprot/Q2P9R8 ^@ 15821985 ^@ Plant Mol Biol|||Plant Mol. Biol. ^@ Molecular characterization of a WEE1 gene homologue in tomato (Lycopersicon esculentum Mill.). ^@ Causse M.|||Chevalier C.|||Delmas F.|||Duffe P.|||Gevaudant F.|||Gonzalez N.|||Hernould M.|||Mouras A.
http://togogenome.org/gene/4081:SFP6 ^@ http://purl.uniprot.org/uniprot/K4DGY9 ^@ 24833026 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ The sugar transporter inventory of tomato: genome-wide identification and expression analysis. ^@ Akiyama M.|||Aoki K.|||Koh A.|||Makino H.|||Reuscher S.|||Shibata D.|||Shiratake K.|||Yasuda T.
http://togogenome.org/gene/4081:LOC101263912 ^@ http://purl.uniprot.org/uniprot/A0A3Q7GK12 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:LyesC2p010 ^@ http://purl.uniprot.org/uniprot/A0A0C5CUV5|||http://purl.uniprot.org/uniprot/Q2MI43 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:GGH2 ^@ http://purl.uniprot.org/uniprot/B2Z9Y5 ^@ 18757550 ^@ Plant Physiol|||Plant Physiol. ^@ Tomato gamma-glutamylhydrolases: expression, characterization, and evidence for heterodimer formation. ^@ Akhtar T.A.|||Giovannoni J.J.|||Gregory J.F.|||Gregory J.F.III.|||Hanson A.D.|||McQuinn R.P.|||Naponelli V.
http://togogenome.org/gene/4081:AnthOMT ^@ http://purl.uniprot.org/uniprot/K4CVP2 ^@ 25227758 ^@ Plant J|||Plant J. ^@ An O-methyltransferase modifies accumulation of methylated anthocyanins in seedlings of tomato. ^@ Aharoni A.|||Beekwilder J.|||Gomez Roldan M.V.|||Hall R.D.|||Lammers M.|||Outchkourov N.|||Romero de la Fuente I.|||Ziklo N.|||van Houwelingen A.
http://togogenome.org/gene/4081:LOC100316877 ^@ http://purl.uniprot.org/uniprot/K4CJJ1 ^@ 19246595|||22108525|||22345638|||25039074|||29632966|||29760199 ^@ Cell. Mol. Life Sci.|||J. Exp. Bot.|||Plant Physiol. ^@ Fruit-specific RNAi-mediated suppression of SlNCED1 increases both lycopene and beta-carotene contents in tomato fruit.|||SlNCED1 and SlCYP707A2: key genes involved in ABA metabolism during tomato fruit ripening.|||Suppression of 9-cis-epoxycarotenoid dioxygenase, which encodes a key enzyme in abscisic acid biosynthesis, alters fruit texture in transgenic tomato.|||The NAC transcription factor SlNAP2 regulates leaf senescence and fruit yield in tomato.|||The functional analysis of SlNCED1 in tomato pollen development.|||The role of ABA in triggering ethylene biosynthesis and ripening of tomato fruit. ^@ Balazadeh S.|||Chen P.|||Cui M.|||Dai S.|||Du Y.|||Duan C.|||Fernie A.R.|||Guo Y.|||Ji K.|||Jiang L.|||Kai W.|||Leng P.|||Li P.|||Li Q.|||Liang B.|||Ma X.|||Mueller-Roeber B.|||Pei Y.|||Ren J.|||Sun L.|||Sun Y.|||Tureckova V.|||Wang H.|||Wang J.|||Wang L.|||Wang Q.|||Wang Y.|||Wu Y.|||Xue G.-P.|||Yuan B.|||Zhang M.|||Zhang Y.|||Zhao B.
http://togogenome.org/gene/4081:LOC543883 ^@ http://purl.uniprot.org/uniprot/Q7XAD0 ^@ 12748180|||12949264 ^@ J. Biol. Chem.|||Proc. Natl. Acad. Sci. U.S.A. ^@ Systemic signaling in tomato plants for defense against herbivores: isolation and characterization of three novel defense-signaling glycopeptide hormones coded in a single precursor gene.|||Systemins: a functionally defined family of peptide signals that regulate defensive genes in Solanaceae species. ^@ Pearce G.|||Ryan C.A.
http://togogenome.org/gene/4081:LOC101247506 ^@ http://purl.uniprot.org/uniprot/P43281 ^@ 8018871 ^@ Plant Mol. Biol. ^@ Differential accumulation of S-adenosylmethionine synthetase transcripts in response to salt stress. ^@ Espartero J.|||Pardo J.M.|||Pintor-Toro J.A.
http://togogenome.org/gene/4081:ACS4 ^@ http://purl.uniprot.org/uniprot/P29535 ^@ 1549612|||1711229|||1762159|||2191304|||8366090 ^@ J. Biol. Chem.|||J. Mol. Biol.|||Proc. Natl. Acad. Sci. U.S.A. ^@ 1-aminocyclopropane-1-carboxylate synthase in tomato is encoded by a multigene family whose transcription is induced during fruit and floral senescence.|||Cloning and sequence of two different cDNAs encoding 1-aminocyclopropane-1-carboxylate synthase in tomato.|||Differential accumulation of transcripts for four tomato 1-aminocyclopropane-1-carboxylate synthase homologs under various conditions.|||Differential expression of two genes for 1-aminocyclopropane-1-carboxylate synthase in tomato fruits.|||LE-ACS4, a fruit ripening and wound-induced 1-aminocyclopropane-1-carboxylate synthase gene of tomato (Lycopersicon esculentum). Expression in Escherichia coli, structural characterization, expression characteristics, and phylogenetic analysis. ^@ Campbell A.D.|||Edelman L.|||Goodman H.M.|||Harkins R.N.|||Keller J.A.|||Kende H.|||Lincoln J.E.|||Moore T.|||Nagy B.P.|||Oeller P.W.|||Oetiker J.|||Olson D.C.|||Peter G.F.|||Rottmann W.H.|||Shen N.F.|||Taylor L.P.|||Theologis A.|||White J.A.|||Yang S.F.|||Yip W.K.|||van Montagu M.|||van Wiemeersch L.|||van der Straeten D.
http://togogenome.org/gene/4081:SAP1 ^@ http://purl.uniprot.org/uniprot/B6JU38 ^@ 19424724 ^@ Mol Genet Genomics|||Mol. Genet. Genomics ^@ Characterization and phylogenetic analysis of environmental stress-responsive SAP gene family encoding A20/AN1 zinc finger proteins in tomato. ^@ Sharma A.K.|||Sharma M.K.|||Solanke A.U.|||Tyagi A.K.
http://togogenome.org/gene/4081:tm-2 ^@ http://purl.uniprot.org/uniprot/Q71BH1 ^@ 14558663|||15290376|||16172136|||24173917|||2535549|||28258211|||29018314|||9612948 ^@ Arch. Virol.|||J. Exp. Bot.|||Mol. Plant Microbe Interact.|||Plant Cell|||Plant Mol. Biol.|||Plant Pathol. J.|||Plant Physiol.|||Theor. Appl. Genet. ^@ Antiviral resistance protein Tm-2(2) functions on the plasma membrane.|||Cloning and characterization of the durable tomato mosaic virus resistance gene Tm-2(2) from Lycopersicon esculentum.|||Experimental infection of different tomato genotypes with tomato mosaic virus led to a low viral population heterogeneity in the capsid protein encoding region.|||Identification of RAPD markers linked to the Tm-2 locus in tomato.|||Mutations in the tobacco mosaic virus 30-kD protein gene overcome Tm-2 resistance in tomato.|||The Tomato mosaic virus 30 kDa movement protein interacts differentially with the resistance genes Tm-2 and Tm-2(2).|||The products of the broken Tm-2 and the durable Tm-2(2) resistance genes from tomato differ in four amino acids.|||Tm-2(2) resistance in tomato requires recognition of the carboxy terminus of the movement protein of tomato mosaic virus. ^@ Chen T.|||Dijkhuis J.|||Glasa M.|||Han L.|||Hille J.|||Hong Y.|||Hudcovicova M.|||Kraic J.|||Kudela O.|||Lanfermeijer F.C.|||Liu D.|||Liu N.|||Liu Y.|||Maeda T.|||Meshi T.|||Mihalik D.|||Motoyoshi F.|||Mrkvova M.|||Murata M.|||Niu X.|||Ohmori T.|||Ohnesorge S.|||Okada Y.|||Pfitzner A.J.P.|||Predajna L.|||Qian L.|||Sihelska N.|||Silber M.V.|||Soltys K.|||Sturre M.J.G.|||Vozarova Z.|||Wang J.|||Warmink J.|||Watanabe H.|||Weber H.|||Yoshiwoka S.|||Zhao J.|||de Haan P.
http://togogenome.org/gene/4081:CXE1 ^@ http://purl.uniprot.org/uniprot/K7SGP9 ^@ 23112200 ^@ Proc Natl Acad Sci U S A|||Proc. Natl. Acad. Sci. U.S.A. ^@ Role of an esterase in flavor volatile variation within the tomato clade. ^@ Floystad A.|||Goulet C.|||Klee H.J.|||Lam N.B.|||Mageroy M.H.|||Tieman D.M.
http://togogenome.org/gene/4081:LOC778316 ^@ http://purl.uniprot.org/uniprot/Q53U41 ^@ 20350329 ^@ BMC Genomics ^@ Large-scale analysis of full-length cDNAs from the tomato (Solanum lycopersicum) cultivar Micro-Tom, a reference system for the Solanaceae genomics. ^@ Aoki K.|||Arie T.|||Egusa M.|||Ezura H.|||Fukushima S.|||Ichinose Y.|||Kawamura S.|||Kikuchi M.|||Kodama M.|||Kohara Y.|||Kurabayashi A.|||Narita T.|||Okabe A.|||Omura T.|||Ooga K.|||Sakurai N.|||Sato Y.|||Satoh S.|||Shibata D.|||Shin-I T.|||Shin-i T.|||Suda K.|||Suzuki A.|||Suzuki T.|||Takahashi H.|||Torii M.|||Tsugane T.|||Watanabe M.|||Watanabe Y.|||Yamamoto N.|||Yano K.|||Yazawa K.
http://togogenome.org/gene/4081:PE1 ^@ http://purl.uniprot.org/uniprot/P14280 ^@ 1303747|||14635125|||2089377|||3732279|||8018878 ^@ Eur. J. Biochem.|||Plant Mol. Biol.|||Protein Sci.|||Protein Seq. Data Anal.|||Proteins ^@ Disulfide bridges in tomato pectinesterase: variations from pectinesterases of other species; conservation of possible active site segments.|||Molecular characterisation of cDNA clones representing pectin esterase isozymes from tomato.|||Pectinesterase. The primary structure of the tomato enzyme.|||Tomato and Aspergillus niger pectinesterases. Correlation of differences in existing reports: large species variations.|||Tomato pectin methylesterase: modeling, fluorescence, and inhibitor interaction studies-comparison with the bacterial (Erwinia chrysanthemi) enzyme. ^@ Bird C.R.|||Camardella L.|||Christensen T.M.|||D'Avino R.|||Giovane A.|||Grierson D.|||Hall L.N.|||Joernvall H.|||Markovic O.|||Picton S.|||Servillo L.|||Seymour G.B.|||Tucker G.A.
http://togogenome.org/gene/4081:SlIAA16 ^@ http://purl.uniprot.org/uniprot/G9HPW4 ^@ 22368074 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ Genome-Wide Identification, Functional Analysis and Expression Profiling of the Aux/IAA Gene Family in Tomato.|||Genome-wide identification, functional analysis and expression profiling of the Aux/IAA gene family in tomato. ^@ Audran-Delalande C.|||Bassa C.|||Bouzayen M.|||Mila I.|||Regad F.|||Zouine M.
http://togogenome.org/gene/4081:TPS28 ^@ http://purl.uniprot.org/uniprot/G5CV47 ^@ 21813655 ^@ Plant Physiol. ^@ The tomato terpene synthase gene family. ^@ Akhtar T.A.|||Bleeker P.M.|||Bonini M.E.|||Falara V.|||Last R.L.|||Matsuba Y.|||Nguyen T.T.|||Nguyen T.T.H.|||Pichersky E.|||Schauvinhold I.|||Schilmiller A.L.|||Schuurink R.C.|||Spyropoulou E.A.
http://togogenome.org/gene/4081:SlCYP1 ^@ http://purl.uniprot.org/uniprot/O49877 ^@ 11444695 ^@ Genome ^@ Isolation and characterization of a gene encoding a drought-induced cysteine protease in tomato (Lycopersicon esculentum). ^@ Azelmat S.|||Baker E.N.|||Harrak H.|||Tabaeizadeh Z.
http://togogenome.org/gene/4081:PHS1 ^@ http://purl.uniprot.org/uniprot/C1K5M3|||http://purl.uniprot.org/uniprot/R9R6F4 ^@ 19487664|||23757397 ^@ Plant Cell|||Proc. Natl. Acad. Sci. U.S.A. ^@ Evolution of a complex locus for terpene biosynthesis in Solanum.|||Monoterpenes in the glandular trichomes of tomato are synthesized from a neryl diphosphate precursor rather than geranyl diphosphate. ^@ Barry C.S.|||Bolger A.M.|||Charbonneau A.L.|||Falara V.|||Fernie A.R.|||Gonzales-Vigil E.|||Kudrna D.|||Larson M.|||Last R.L.|||Leong B.|||Matsuba Y.|||Nguyen T.T.|||Pichersky E.|||Schafer P.|||Schauvinhold I.|||Schilmiller A.L.|||Schmidt A.|||Tissier A.|||Usadel B.|||Wiegert K.|||Wilkerson C.|||Wing R.A.|||Xu R.
http://togogenome.org/gene/4081:SlCYC1 ^@ http://purl.uniprot.org/uniprot/G3BGU7 ^@ 24903607 ^@ BMC Plant Biol|||BMC Plant Biol. ^@ Identification, cloning and characterization of the tomato TCP transcription factor family. ^@ Angenent G.C.|||Bovy A.G.|||Busscher M.|||Busscher-Lange J.|||Karlova R.|||Lammers M.|||Parapunova V.|||de Maagd R.A.
http://togogenome.org/gene/4081:PIN6 ^@ http://purl.uniprot.org/uniprot/E5KGD8 ^@ 22211518 ^@ Plant J|||Plant J. ^@ Evaluating auxin distribution in tomato (Solanum lycopersicum) through an analysis of the PIN and AUX/LAX gene families. ^@ Catala C.|||Pattison R.J.
http://togogenome.org/gene/4081:LOC101248401 ^@ http://purl.uniprot.org/uniprot/K4C741 ^@ 27909045 ^@ Plant Physiol|||Plant Physiol. ^@ A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity. ^@ Chen X.|||Connor R.A.|||Gough J.|||Martin G.B.|||Mural R.V.|||Oates M.E.|||Zeng L.|||Zhou B.
http://togogenome.org/gene/4081:JA2 ^@ http://purl.uniprot.org/uniprot/Q9SQL0 ^@ 25005917 ^@ Plant Cell ^@ Closely related NAC transcription factors of tomato differentially regulate stomatal closure and reopening during pathogen attack. ^@ Deng L.|||Du M.|||Huang T.|||Huang Z.|||Jiang H.|||Kang L.|||Li C.|||Li C.B.|||Li H.|||Li J.|||Li S.|||Wang B.|||Wei J.|||Yan L.|||Zhai Q.
http://togogenome.org/gene/4081:PIN2 ^@ http://purl.uniprot.org/uniprot/E5KGD3 ^@ 22211518 ^@ Plant J|||Plant J. ^@ Evaluating auxin distribution in tomato (Solanum lycopersicum) through an analysis of the PIN and AUX/LAX gene families. ^@ Catala C.|||Pattison R.J.
http://togogenome.org/gene/4081:MTS2 ^@ http://purl.uniprot.org/uniprot/Q1XBU4 ^@ 17440821|||21813655 ^@ Plant Mol. Biol.|||Plant Physiol. ^@ The tomato terpene synthase gene family.|||Tomato linalool synthase is induced in trichomes by jasmonic acid. ^@ Akhtar T.A.|||Bleeker P.M.|||Bonini M.E.|||Falara V.|||Haring M.A.|||Last R.L.|||Matsuba Y.|||Nguyen T.T.|||Nguyen T.T.H.|||Pichersky E.|||Schauvinhold I.|||Schilmiller A.L.|||Schuurink R.C.|||Spyropoulou E.A.|||van Schie C.C.
http://togogenome.org/gene/4081:PTOX ^@ http://purl.uniprot.org/uniprot/Q9FEC9 ^@ 10938359 ^@ Plant Physiol. ^@ A plastid terminal oxidase associated with carotenoid desaturation during chromoplast differentiation. ^@ Carol P.|||Gaffe J.|||Josse E.-M.|||Josse E.M.|||Kuntz M.|||Laboure A.-M.|||Laboure A.M.|||Simkin A.J.
http://togogenome.org/gene/4081:IAA21 ^@ http://purl.uniprot.org/uniprot/F8V9M2 ^@ 22314799 ^@ Mol Genet Genomics|||Mol. Genet. Genomics ^@ Genome-wide analysis of Aux/IAA gene family in Solanaceae species using tomato as a model.|||Genome-wide analysis of Aux/IAA gene family in Solanaceae species using tomato as a model. ^@ Cheng L.|||He Y.|||Kong F.|||Liu S.|||Lu G.|||Peng Z.|||Wang J.|||Wu J.
http://togogenome.org/gene/4081:LOC100301933 ^@ http://purl.uniprot.org/uniprot/B7U6X3 ^@ 20044450 ^@ Plant Physiol. ^@ WOX4 promotes procambial development. ^@ Ji J.|||Koenig D.|||Scanlon M.J.|||Shimizu R.|||Sinha N.|||Strable J.
http://togogenome.org/gene/4081:HSP21 ^@ http://purl.uniprot.org/uniprot/Q95661 ^@ 9625718 ^@ Plant Physiol. ^@ Expression of small heat-shock proteins at low temperatures. A possible role in protecting against chilling injuries. ^@ Lurie S.|||Sabehat A.|||Weiss D.
http://togogenome.org/gene/4081:LyesC2p014 ^@ http://purl.uniprot.org/uniprot/A0A0C5CUU9|||http://purl.uniprot.org/uniprot/Q2MI47 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:MLH1 ^@ http://purl.uniprot.org/uniprot/A0A097PJP2|||http://purl.uniprot.org/uniprot/A5H619 ^@ 17337626|||25249442 ^@ Nat. Commun.|||Plant Cell ^@ Resolution of deep angiosperm phylogeny using conserved nuclear genes and estimates of early divergence times.|||The mismatch repair protein MLH1 marks a subset of strongly interfering crossovers in tomato. ^@ Heyting C.|||Kong H.|||Lhuissier F.G.|||Ma H.|||Offenberg H.H.|||Sun R.|||Vischer N.O.|||Wittich P.E.|||Zeng L.|||Zhang N.|||Zhang Q.
http://togogenome.org/gene/4081:FRK2 ^@ http://purl.uniprot.org/uniprot/Q42896 ^@ 9112782 ^@ Plant Physiol. ^@ Divergent fructokinase genes are differentially expressed in tomato. ^@ Bennett A.B.|||Dai N.|||Granot D.|||Kanayama Y.|||Petreikov M.|||Schaffer A.
http://togogenome.org/gene/4081:LOC101263651 ^@ http://purl.uniprot.org/uniprot/B1N670 ^@ 18339939 ^@ Science ^@ A retrotransposon-mediated gene duplication underlies morphological variation of tomato fruit. ^@ Jiang N.|||Schaffner E.|||Stockinger E.J.|||Xiao H.|||van der Knaap E.
http://togogenome.org/gene/4081:LOC101244464 ^@ http://purl.uniprot.org/uniprot/K4B017 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:Glb2 ^@ http://purl.uniprot.org/uniprot/Q941P9 ^@ 11725952 ^@ Plant Mol. Biol. ^@ Expression and evolution of functionally distinct haemoglobin genes in plants. ^@ Burnell J.|||Dennis E.S.|||Hunt P.W.|||Llewellyn D.J.|||Peacock W.J.|||Trevaskis B.|||Watts R.A.
http://togogenome.org/gene/4081:EO ^@ http://purl.uniprot.org/uniprot/K4BW79 ^@ 16517758 ^@ Plant Cell ^@ FaQR, required for the biosynthesis of the strawberry flavor compound 4-hydroxy-2,5-dimethyl-3(2H)-furanone, encodes an enone oxidoreductase. ^@ Caballero J.L.|||Klein D.|||Lopez-Raez J.A.|||Moyano E.|||Munoz-Blanco J.|||Raab T.|||Schwab W.
http://togogenome.org/gene/4081:SNF1 ^@ http://purl.uniprot.org/uniprot/Q9M726 ^@ 12857836 ^@ Plant Physiol|||Plant Physiol. ^@ Abscisic acid and gibberellin differentially regulate expression of genes of the SNF1-related kinase complex in tomato seeds. ^@ Alvarado V.|||Bradford K.J.|||Dahal P.|||Downie A.B.|||Gee O.H.|||Yang H.
http://togogenome.org/gene/4081:MKS1e ^@ http://purl.uniprot.org/uniprot/E0YCS7 ^@ 20605911 ^@ Plant Physiol|||Plant Physiol. ^@ Enzymatic functions of wild tomato methylketone synthases 1 and 2. ^@ Auldridge M.E.|||Ben-Israel I.|||Bhuiyan N.|||Fridman E.|||Guo Y.|||Iijima Y.|||Nguyen T.T.|||Noel J.P.|||Pichersky E.|||Schauvinhold I.|||Yu G.
http://togogenome.org/gene/4081:SlIPT2 ^@ http://purl.uniprot.org/uniprot/I0IUP7 ^@ 22865911 ^@ J Exp Bot|||J. Exp. Bot. ^@ Roles and regulation of cytokinins in tomato fruit development. ^@ Fukuda M.|||Honda I.|||Imanishi S.|||Kikuchi K.|||Matsuo S.
http://togogenome.org/gene/4081:TCTR1 ^@ http://purl.uniprot.org/uniprot/O24027 ^@ 10417710|||12427980|||9289746 ^@ Plant J|||Plant J.|||Plant Physiol|||Plant Physiol. ^@ A cDNA sequence isolated from the ripening tomato fruit encodes a putative protein kinase.|||Ethylene-regulated gene expression in tomato fruit: characterization of novel ethylene-responsive and ripening-related genes isolated by differential display.|||LeCTR1, a tomato CTR1-like gene, demonstrates ethylene signaling ability in Arabidopsis and novel expression patterns in tomato.|||The electronic Plant Gene Register. ^@ Adams-Phillips L.C.|||Bouzayen M.|||Frasse P.|||Giovannoni J.J.|||Jones B.|||Latch A.|||Latche A.|||Leclercq J.|||Li N.|||Maitre B.|||Marty C.|||Pech J.C.|||Wang Y.|||Zegzouti H.
http://togogenome.org/gene/4081:LOC101250233 ^@ http://purl.uniprot.org/uniprot/A0A3Q7HCW9 ^@ 32613943 ^@ Elife ^@ Evolution of a plant gene cluster in Solanaceae and emergence of metabolic diversity. ^@ Brandizzi F.|||Cao P.|||Combs R.|||Fan P.|||Last R.L.|||Leong B.J.|||Lou Y.R.|||Moore B.M.|||Schenck C.A.|||Shiu S.H.|||Wang P.
http://togogenome.org/gene/4081:STP12 ^@ http://purl.uniprot.org/uniprot/A0A060PNU2 ^@ 24833026 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ The sugar transporter inventory of tomato: genome-wide identification and expression analysis. ^@ Akiyama M.|||Aoki K.|||Koh A.|||Makino H.|||Reuscher S.|||Shibata D.|||Shiratake K.|||Yasuda T.
http://togogenome.org/gene/4081:LOC101258363 ^@ http://purl.uniprot.org/uniprot/A0A3Q7G7F0 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:TCP21 ^@ http://purl.uniprot.org/uniprot/G3BGW1 ^@ 24903607 ^@ BMC Plant Biol|||BMC Plant Biol. ^@ Identification, cloning and characterization of the tomato TCP transcription factor family. ^@ Angenent G.C.|||Bovy A.G.|||Busscher M.|||Busscher-Lange J.|||Karlova R.|||Lammers M.|||Parapunova V.|||de Maagd R.A.
http://togogenome.org/gene/4081:FYFL ^@ http://purl.uniprot.org/uniprot/W5S185 ^@ 24621662 ^@ Sci Rep|||Sci. Rep. ^@ Overexpression of a novel MADS-box gene SlFYFL delays senescence, fruit ripening and abscission in tomato. ^@ Chen G.|||Cui B.|||Dong T.|||Hu Z.|||Xie Q.|||Zhao Z.|||Zhu Z.
http://togogenome.org/gene/4081:LOC101245626 ^@ http://purl.uniprot.org/uniprot/V5YN12 ^@ 24260152 ^@ PLoS ONE|||PLoS One ^@ Genome-wide identification and expression analysis of aquaporins in tomato. ^@ Akiyama M.|||Aoki K.|||Mori C.|||Reuscher S.|||Shibata D.|||Shiratake K.
http://togogenome.org/gene/4081:CHI17 ^@ http://purl.uniprot.org/uniprot/Q05540 ^@ 8400122 ^@ Plant Mol. Biol. ^@ Molecular characterization of four chitinase cDNAs obtained from Cladosporium fulvum-infected tomato. ^@ Danhash N.|||Wagemakers C.A.M.|||de Wit P.J.G.M.|||van Kan J.A.L.
http://togogenome.org/gene/4081:LOC101253904 ^@ http://purl.uniprot.org/uniprot/Q5GA61 ^@ 16009996 ^@ Plant Physiol|||Plant Physiol. ^@ Complex organization and evolution of the tomato pericentromeric region at the FER gene locus. ^@ Cheng X.|||Cheng Z.|||Guyot R.|||Keller B.|||Ling H.Q.|||Schlagenhauf E.|||Su Y.
http://togogenome.org/gene/4081:LOC543848 ^@ http://purl.uniprot.org/uniprot/Q9SYV0 ^@ 21947620 ^@ Planta ^@ Features of a unique intronless cluster of class I small heat shock protein genes in tandem with box C/D snoRNA genes on chromosome 6 in tomato (Solanum lycopersicum). ^@ Chung S.H.|||Giovannoni J.J.|||Goyal R.K.|||Kumar V.|||Liu Y.|||Mattoo A.K.|||Mattoo R.|||Shukla V.
http://togogenome.org/gene/4081:LOG8 ^@ http://purl.uniprot.org/uniprot/I0IUQ4 ^@ 22865911 ^@ J Exp Bot|||J. Exp. Bot. ^@ Roles and regulation of cytokinins in tomato fruit development. ^@ Fukuda M.|||Honda I.|||Imanishi S.|||Kikuchi K.|||Matsuo S.
http://togogenome.org/gene/4081:MAPK4 ^@ http://purl.uniprot.org/uniprot/E2GLN8 ^@ 22306326 ^@ Gene ^@ Genome-wide analysis of the mitogen-activated protein kinase gene family in Solanum lycopersicum. ^@ Cheng L.|||Kong F.|||Liu S.|||Lu G.|||Peng Z.|||Wang J.|||Wu J.
http://togogenome.org/gene/4081:LOC101055567 ^@ http://purl.uniprot.org/uniprot/H8ZRY2 ^@ 22330838 ^@ BMC Plant Biol|||BMC Plant Biol. ^@ Characterization of a calcium/calmodulin-regulated SR/CAMTA gene family during tomato fruit development and ripening. ^@ Conway W.S.|||Peng H.|||Whitaker B.D.|||Yang T.
http://togogenome.org/gene/4081:LIN7 ^@ http://purl.uniprot.org/uniprot/Q8L4N2 ^@ 10781077|||12586884|||15375271 ^@ Plant Physiol|||Plant Physiol.|||Proc Natl Acad Sci U S A|||Proc. Natl. Acad. Sci. U.S.A.|||Science ^@ A recombination hotspot delimits a wild-species quantitative trait locus for tomato sugar content to 484 bp within an invertase gene.|||Functional divergence of a syntenic invertase gene family in tomato, potato, and Arabidopsis.|||Zooming in on a quantitative trait for tomato yield using interspecific introgressions. ^@ Carrari F.|||Fernie A.R.|||Fridman E.|||Liu Y.S.|||Pleban T.|||Zamir D.
http://togogenome.org/gene/4081:PLDb2 ^@ http://purl.uniprot.org/uniprot/Q9AWB6 ^@ 11446372 ^@ Plant J|||Plant J. ^@ Characterization of five tomato phospholipase D cDNAs: rapid and specific expression of LePLDbeta1 on elicitation with xylanase. ^@ Haring M.|||Laxalt A.M.|||Munnik T.|||Musgrave A.|||Parigi L.|||Tameling W.I.|||Verdonk J.C.|||Vossen J.|||ter Riet B.
http://togogenome.org/gene/4081:LyesC2p062 ^@ http://purl.uniprot.org/uniprot/A0A0C5CEC7|||http://purl.uniprot.org/uniprot/Q2MI93 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:MKS2c ^@ http://purl.uniprot.org/uniprot/E0YCT0 ^@ 20605911 ^@ Plant Physiol|||Plant Physiol. ^@ Enzymatic functions of wild tomato methylketone synthases 1 and 2. ^@ Auldridge M.E.|||Ben-Israel I.|||Bhuiyan N.|||Fridman E.|||Guo Y.|||Iijima Y.|||Nguyen T.T.|||Noel J.P.|||Pichersky E.|||Schauvinhold I.|||Yu G.
http://togogenome.org/gene/4081:LOC101264951 ^@ http://purl.uniprot.org/uniprot/K4CHT4 ^@ 27909045 ^@ Plant Physiol|||Plant Physiol. ^@ A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity. ^@ Chen X.|||Connor R.A.|||Gough J.|||Martin G.B.|||Mural R.V.|||Oates M.E.|||Zeng L.|||Zhou B.
http://togogenome.org/gene/4081:LyesC2p056 ^@ http://purl.uniprot.org/uniprot/A0A0C5CHE9|||http://purl.uniprot.org/uniprot/Q2MI87 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LOC101258083 ^@ http://purl.uniprot.org/uniprot/Q9ARC8 ^@ 11283350 ^@ Plant Cell ^@ Comparative sequence analysis reveals extensive microcolinearity in the lateral suppressor regions of the tomato, Arabidopsis, and Capsella genomes. ^@ Acarkan A.|||Herrero R.|||Rossberg M.|||Schmidt R.|||Schmitt T.|||Schmitz G.|||Schumacher K.|||Theres K.
http://togogenome.org/gene/4081:GPA1 ^@ http://purl.uniprot.org/uniprot/P26981 ^@ 1748292 ^@ Gene ^@ Isolation and sequence analysis of TGA1 cDNAs encoding a tomato G protein alpha subunit. ^@ Huang H.|||Ma H.|||Yanofsky M.F.
http://togogenome.org/gene/4081:LOC543817 ^@ http://purl.uniprot.org/uniprot/Q9FT19 ^@ 15037622 ^@ J Biol Chem|||J. Biol. Chem. ^@ Differential roles of tau class glutathione S-transferases in oxidative stress. ^@ Al-Sabarna K.|||Atanassova N.|||Clatot N.|||Kampranis S.C.|||Kanellopoulos P.N.|||Kilili K.G.|||Makris A.M.|||Vardanyan A.
http://togogenome.org/gene/4081:LOC100316879 ^@ http://purl.uniprot.org/uniprot/C6KGT3 ^@ 19897910 ^@ Biosci Biotechnol Biochem|||Biosci. Biotechnol. Biochem. ^@ Expression profiling of a novel calcium-dependent protein kinase gene, LeCPK2, from tomato (Solanum lycopersicum) under heat and pathogen-related hormones. ^@ Chang W.J.|||Li W.J.|||Su H.S.|||Zhang Z.L.
http://togogenome.org/gene/4081:GCH1 ^@ http://purl.uniprot.org/uniprot/Q8VYU3 ^@ 12221287 ^@ Proc. Natl. Acad. Sci. U.S.A. ^@ Folate synthesis in plants: the first step of the pterin branch is mediated by a unique bimodular GTP cyclohydrolase I. ^@ Bacher A.|||Basset G.|||Diaz De La Garza R.|||Fischer M.|||Gregory J.F.|||Hanson A.D.|||Quinlivan E.P.|||Schiffmann S.|||Ziemak M.J.
http://togogenome.org/gene/4081:SlCRF1 ^@ http://purl.uniprot.org/uniprot/O04682 ^@ 11971137|||9214637 ^@ EMBO J.|||Plant Cell ^@ The Pto kinase conferring resistance to tomato bacterial speck disease interacts with proteins that bind a cis-element of pathogenesis-related genes.|||Tomato transcription factors pti4, pti5, and pti6 activate defense responses when expressed in Arabidopsis. ^@ Chakravarthy S.|||Gu Y.-Q.|||Han Y.|||He X.|||Loh Y.-T.|||Martin G.B.|||Tang X.|||Wildermuth M.C.|||Yang C.|||Zhou J.-M.
http://togogenome.org/gene/4081:MCA1 ^@ http://purl.uniprot.org/uniprot/K4CWY6 ^@ 23850889 ^@ FEBS Lett|||FEBS Lett. ^@ Biochemical evidence of key residues for the activation and autoprocessing of tomato type II metacaspase. ^@ Fu D.Q.|||Luo Y.B.|||Ma Q.M.|||Qu G.Q.|||Wen S.|||Yang J.P.|||Zhang Y.L.|||Zhao G.H.
http://togogenome.org/gene/4081:LOC101261236 ^@ http://purl.uniprot.org/uniprot/A0A3Q7GQ29 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:LOC101266644 ^@ http://purl.uniprot.org/uniprot/Q56R05 ^@ 15842623 ^@ Plant J. ^@ EDS1 in tomato is required for resistance mediated by TIR-class R genes and the receptor-like R gene Ve. ^@ Aegerter B.J.|||Baker B.|||Handley V.|||Hu G.|||Hwang C.F.|||Li Y.|||Navarre R.|||Ustach C.|||Williamson V.M.|||deHart A.K.|||deHart A.K.A.
http://togogenome.org/gene/4081:SAM3 ^@ http://purl.uniprot.org/uniprot/P43282 ^@ 8018871 ^@ Plant Mol. Biol. ^@ Differential accumulation of S-adenosylmethionine synthetase transcripts in response to salt stress. ^@ Espartero J.|||Pardo J.M.|||Pintor-Toro J.A.
http://togogenome.org/gene/4081:TPS17 ^@ http://purl.uniprot.org/uniprot/G5CV52 ^@ 21813655|||21818683 ^@ Plant Mol. Biol.|||Plant Physiol. ^@ RNA-seq discovery, functional characterization, and comparison of sesquiterpene synthases from Solanum lycopersicum and Solanum habrochaites trichomes.|||The tomato terpene synthase gene family. ^@ Akhtar T.A.|||Bleeker P.M.|||Bohlmann J.|||Bonini M.E.|||De Both M.T.J.|||Diergaarde P.J.|||Falara V.|||Haring M.A.|||Last R.L.|||Matsuba Y.|||Nguyen T.T.|||Nguyen T.T.H.|||Pichersky E.|||Schauvinhold I.|||Schilmiller A.L.|||Schuurink R.C.|||Spyropoulou E.A.|||Volpin H.|||Zerbe P.
http://togogenome.org/gene/4081:CYP734A8 ^@ http://purl.uniprot.org/uniprot/Q0X086 ^@ 16872648 ^@ Phytochemistry ^@ Tomato cytochrome P450 CYP734A7 functions in brassinosteroid catabolism. ^@ Miyagawa H.|||Mizutani M.|||Nomura T.|||Ohnishi T.|||Ohta D.|||Sakata K.|||Watanabe B.|||Yokota T.
http://togogenome.org/gene/4081:LyesC2p044 ^@ http://purl.uniprot.org/uniprot/A0A0U1ZHN2|||http://purl.uniprot.org/uniprot/Q2MI75 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:rpl38 ^@ http://purl.uniprot.org/uniprot/P46291 ^@ 8467223 ^@ Plant Cell ^@ The patterns of gene expression in the tomato shoot apical meristem. ^@ Fleming A.J.|||Kuhlemeier C.|||Mandel T.|||Roth I.
http://togogenome.org/gene/4081:LOC543814 ^@ http://purl.uniprot.org/uniprot/Q9FT22 ^@ 15037622 ^@ J Biol Chem|||J. Biol. Chem. ^@ Differential roles of tau class glutathione S-transferases in oxidative stress. ^@ Al-Sabarna K.|||Atanassova N.|||Clatot N.|||Kampranis S.C.|||Kanellopoulos P.N.|||Kilili K.G.|||Makris A.M.|||Vardanyan A.
http://togogenome.org/gene/4081:LOC101253922 ^@ http://purl.uniprot.org/uniprot/K4ATQ2 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:rps16 ^@ http://purl.uniprot.org/uniprot/B3IWG3 ^@ 18453549 ^@ Mol. Biol. Evol. ^@ Substitution of the gene for chloroplast RPS16 was assisted by generation of a dual targeting signal. ^@ Arimura S.|||Fujimoto M.|||Kadowaki K.|||Nishikawa T.|||Takanashi H.|||Tsutsumi N.|||Ueda M.
http://togogenome.org/gene/4081:EDS1 ^@ http://purl.uniprot.org/uniprot/Q56R03 ^@ 15842623 ^@ Plant J. ^@ EDS1 in tomato is required for resistance mediated by TIR-class R genes and the receptor-like R gene Ve. ^@ Aegerter B.J.|||Baker B.|||Handley V.|||Hu G.|||Hwang C.F.|||Li Y.|||Navarre R.|||Ustach C.|||Williamson V.M.|||deHart A.K.|||deHart A.K.A.
http://togogenome.org/gene/4081:LyesC2p077 ^@ http://purl.uniprot.org/uniprot/A0A0C5CEA8|||http://purl.uniprot.org/uniprot/Q2MIA8 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LOC544156 ^@ http://purl.uniprot.org/uniprot/P49972 ^@ 7808407 ^@ Mol. Gen. Genet. ^@ Structural and functional characterisation of the signal recognition particle-specific 54 kDa protein (SRP54) of tomato. ^@ Krolkiewicz S.|||Niesbach-Klosgen U.|||Sanger H.L.
http://togogenome.org/gene/4081:LOC543986 ^@ http://purl.uniprot.org/uniprot/Q01412 ^@ 1421154 ^@ Plant Mol. Biol. ^@ Differential accumulation of mRNAs encoding extracellular and intracellular PR proteins in tomato induced by virulent and avirulent races of Cladosporium fulvum. ^@ Joosten M.H.A.J.|||Wagemakers C.A.M.|||de Wit P.J.G.M.|||van Kan J.A.L.|||van den Berg-Velthuis G.C.M.
http://togogenome.org/gene/4081:LOC101262181 ^@ http://purl.uniprot.org/uniprot/O22549 ^@ 9449838 ^@ Plant Physiol|||Plant Physiol. ^@ Tomato phosphate transporter genes are differentially regulated in plant tissues by phosphorus. ^@ Kononowicz A.K.|||Liu C.|||Muchhal U.S.|||Raghothama K.G.|||Uthappa M.
http://togogenome.org/gene/4081:LyesC2p074 ^@ http://purl.uniprot.org/uniprot/A0A0C5CUN5|||http://purl.uniprot.org/uniprot/Q2MIA5 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:GABA-TP1 ^@ http://purl.uniprot.org/uniprot/Q84P54 ^@ 18713763|||19470656 ^@ J. Exp. Bot.|||Plant Cell Physiol. ^@ Biochemical mechanism on GABA accumulation during fruit development in tomato.|||Subcellular localization and expression of multiple tomato gamma-aminobutyrate transaminases that utilize both pyruvate and glyoxylate. ^@ Akama K.|||Akihiro T.|||Aoki K.|||Ashihara H.|||Clark S.M.|||Di Leo R.|||Ezura H.|||Fujimura T.|||Iijima Y.|||Koike S.|||Matsukura C.|||Mullen R.T.|||Shelp B.J.|||Shibata D.|||Tani R.|||Tominaga T.|||Van Cauwenberghe O.R.|||Watanabe S.
http://togogenome.org/gene/4081:Rmc ^@ http://purl.uniprot.org/uniprot/K4CMU3 ^@ 23572326 ^@ Mycorrhiza ^@ The reduced mycorrhizal colonisation (rmc) mutation of tomato disrupts five gene sequences including the CYCLOPS/IPD3 homologue. ^@ Barker S.J.|||Durkin J.M.|||Edmonds-Tibbett T.|||Jackson L.E.|||Larkan N.J.|||Ruzicka D.R.|||Schachtman D.P.|||Smith F.A.|||Smith S.E.
http://togogenome.org/gene/4081:LOC101262263 ^@ http://purl.uniprot.org/uniprot/K4CZH6 ^@ 27579028 ^@ Front Plant Sci|||Front. Plant Sci. ^@ Genome-Wide Study of the Tomato SlMLO Gene Family and Its Functional Characterization in Response to the Powdery Mildew Fungus Oidium neolycopersici. ^@ Appiano M.|||Bai Y.|||Bracuto V.|||Pavan S.|||Ricciardi L.|||Visser R.G.|||Wolters A.M.|||Zheng Z.
http://togogenome.org/gene/4081:SRG1 ^@ http://purl.uniprot.org/uniprot/B6D1Q5 ^@ 17210988 ^@ J Exp Bot|||J. Exp. Bot. ^@ Identification of early salt stress response genes in tomato root by suppression subtractive hybridization and microarray analysis. ^@ Fei Z.|||Li H.|||Ouyang B.|||Yang T.|||Ye Z.|||Zhang J.|||Zhang L.|||Zhang Y.
http://togogenome.org/gene/4081:MYC2 ^@ http://purl.uniprot.org/uniprot/A0A3Q7HRZ6 ^@ 15231736|||24483714|||25612924|||28733419|||29528226|||30576511|||30610166 ^@ BMC Genomics|||BMC Plant Biol.|||Genes Dev.|||J. Agric. Food Chem.|||J. Exp. Bot.|||Plant Cell ^@ Conserved MYC transcription factors play a key role in jasmonate signaling both in tomato and Arabidopsis.|||Genome-wide identification and characterization of the bHLH gene family in tomato.|||LeMYC2 acts as a negative regulator of blue light mediated photomorphogenic growth, and promotes the growth of adult tomato plants.|||MYC2 orchestrates a hierarchical transcriptional cascade that regulates jasmonate-mediated plant immunity in tomato.|||MYC2 regulates the termination of jasmonate signaling via an autoregulatory negative feedback loop.|||SlMYC2 involved in methyl jasmonate-induced tomato fruit chilling tolerance.|||Strigolactones positively regulate defense against root-knot nematodes in tomato. ^@ Abdeen A.|||Boter M.|||Chattopadhyay S.|||Chen Q.|||Chi C.|||Cui X.|||Deng L.|||Dong L.|||Du M.|||Fan H.J.|||Fang M.|||Fang P.|||Gupta N.|||Huang Z.|||Li C.|||Li C.B.|||Li F.|||Ling H.Q.|||Liu Y.|||Lu Y.|||Min D.|||Prasad V.B.|||Prat S.|||Ren C.|||Ruiz-Rivero O.|||Shen J.|||Shi K.|||Shu P.|||Song L.|||Sun H.|||Tzeng D.T.W.|||Wang Q.|||Wu F.|||Xia X.|||Xu X.|||Yang T.|||Yu J.|||Zhai Q.|||Zhang H.|||Zhang X.|||Zhao J.|||Zhong S.|||Zhou J.|||Zhou M.|||Zhou Y.
http://togogenome.org/gene/4081:ODC ^@ http://purl.uniprot.org/uniprot/O22616 ^@ 9733552 ^@ Plant Physiol. ^@ Expression of ornithine decarboxylase is transiently increased by pollination, 2,4-dichlorophenoxyacetic acid, and gibberellic acid in tomato ovaries. ^@ Alabadi D.|||Carbonell J.
http://togogenome.org/gene/4081:EXPA10 ^@ http://purl.uniprot.org/uniprot/Q9FVG9 ^@ 11080302 ^@ Plant Physiol|||Plant Physiol. ^@ Expression of an expansin is associated with endosperm weakening during tomato seed germination. ^@ Bradford K.J.|||Chen F.
http://togogenome.org/gene/4081:psi14A ^@ http://purl.uniprot.org/uniprot/Q8GUC2 ^@ 12702022 ^@ Physiol Plant|||Physiol. Plantarum ^@ Differential expression of the LePS2 phosphatase gene family in response to phosphate availability, pathogen infection and during development. ^@ Bosse D.|||Hertel S.C.|||Kock M.|||Schurath J.|||Stenzel I.|||Ziethe K.
http://togogenome.org/gene/4081:LOC101258206 ^@ http://purl.uniprot.org/uniprot/K4CND1 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:cdkB1 ^@ http://purl.uniprot.org/uniprot/Q9FSH5 ^@ 11500540 ^@ Plant Physiol|||Plant Physiol. ^@ A new C-type cyclin-dependent kinase from tomato expressed in dividing tissues does not interact with mitotic and G1 cyclins. ^@ Chevalier C.|||Delmas F.|||Hernould M.|||Joubes J.|||Lemaire-Chamley M.|||Mouras A.|||Raymond P.|||Walter J.
http://togogenome.org/gene/4081:chMDH ^@ http://purl.uniprot.org/uniprot/Q645M8 ^@ 15665243 ^@ Plant Physiol|||Plant Physiol. ^@ Enhanced photosynthetic performance and growth as a consequence of decreasing mitochondrial malate dehydrogenase activity in transgenic tomato plants. ^@ Carrari F.|||Fernie A.R.|||Loureiro M.E.|||Lytovchenko A.|||Nunes-Nesi A.|||Ratcliffe R.G.|||Smith A.M.|||Sweetlove L.J.
http://togogenome.org/gene/4081:LOC101252449 ^@ http://purl.uniprot.org/uniprot/K4D3L7 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:LOC101256892 ^@ http://purl.uniprot.org/uniprot/A0A3Q7J415 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:LOC543938 ^@ http://purl.uniprot.org/uniprot/Q6IV07 ^@ 15608335 ^@ Plant Cell ^@ A NAC domain protein interacts with tomato leaf curl virus replication accessory protein and enhances viral replication. ^@ Dogra S.C.|||Healy H.|||Randles J.W.|||Rasheed M.S.|||Rezaian M.A.|||Selth L.A.
http://togogenome.org/gene/4081:infA ^@ http://purl.uniprot.org/uniprot/Q94KR9 ^@ 11251102 ^@ Plant Cell ^@ Many parallel losses of infA from chloroplast DNA during angiosperm evolution with multiple independent transfers to the nucleus. ^@ Adams K.L.|||Calie P.J.|||Gray J.C.|||Heggie L.|||Hibberd J.M.|||Jermiin L.S.|||Kavanagh T.A.|||Lao N.T.|||Millen R.S.|||Morden C.W.|||Olmstead R.G.|||Palmer J.D.|||Wolfe K.H.
http://togogenome.org/gene/4081:TPS35 ^@ http://purl.uniprot.org/uniprot/G5CV43 ^@ 21813655 ^@ Plant Physiol. ^@ The tomato terpene synthase gene family. ^@ Akhtar T.A.|||Bleeker P.M.|||Bonini M.E.|||Falara V.|||Last R.L.|||Matsuba Y.|||Nguyen T.T.|||Nguyen T.T.H.|||Pichersky E.|||Schauvinhold I.|||Schilmiller A.L.|||Schuurink R.C.|||Spyropoulou E.A.
http://togogenome.org/gene/4081:LOC101257282 ^@ http://purl.uniprot.org/uniprot/A0A3Q7HBR5 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:LyesC2p033 ^@ http://purl.uniprot.org/uniprot/A0A0C5CEE6|||http://purl.uniprot.org/uniprot/Q2MI64 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:CIPK11 ^@ http://purl.uniprot.org/uniprot/G4XMX3 ^@ 23903322 ^@ Plant Cell ^@ The tomato calcium sensor Cbl10 and its interacting protein kinase Cipk6 define a signaling pathway in plant immunity.|||The tomato calcium sensor cbl10 and its interacting protein kinase cipk6 define a signaling pathway in plant immunity. ^@ Chakravarthy S.|||Del Pozo O.|||Gutierrez-Beltran E.|||Martin G.B.|||Pareja-Jaime Y.|||de la Torre F.|||del Pozo O.
http://togogenome.org/gene/4081:ARF12 ^@ http://purl.uniprot.org/uniprot/E3USC3 ^@ 21735233 ^@ Plant Cell Rep. ^@ Identification, isolation and expression analysis of auxin response factor (ARF) genes in Solanum lycopersicum. ^@ Cheng L.|||Kong F.|||Liu S.|||Lu G.|||Peng Z.|||Wang F.|||Wu J.|||Yu X.
http://togogenome.org/gene/4081:PDF1B ^@ http://purl.uniprot.org/uniprot/Q9FV54 ^@ 11060042 ^@ EMBO J. ^@ Identification of eukaryotic peptide deformylases reveals universality of N-terminal protein processing mechanisms. ^@ Boisson B.|||Giglione C.|||Meinnel T.|||Pierre M.|||Serero A.
http://togogenome.org/gene/4081:LOC100529106 ^@ http://purl.uniprot.org/uniprot/E7EC27 ^@ 24260152 ^@ PLoS ONE|||PLoS One ^@ Genome-wide identification and expression analysis of aquaporins in tomato. ^@ Akiyama M.|||Aoki K.|||Mori C.|||Reuscher S.|||Shibata D.|||Shiratake K.
http://togogenome.org/gene/4081:DHS ^@ http://purl.uniprot.org/uniprot/Q9AXR0 ^@ 11278418 ^@ J. Biol. Chem. ^@ Isolation and characterization of senescence-induced cDNAs encoding deoxyhypusine synthase and eucaryotic translation initiation factor 5A from tomato. ^@ Lu L.|||Thompson J.E.|||Wang D.|||Wang T.-W.
http://togogenome.org/gene/4081:LyesC2p067 ^@ http://purl.uniprot.org/uniprot/A0A0C5CEC3|||http://purl.uniprot.org/uniprot/Q2MI98 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LOC101246764 ^@ http://purl.uniprot.org/uniprot/K4CG62 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:LRP ^@ http://purl.uniprot.org/uniprot/Q96477 ^@ 8771787 ^@ Plant J|||Plant J. ^@ Characterization of LRP, a leucine-rich repeat (LRR) protein from tomato plants that is processed during pathogenesis. ^@ Canas L.|||Conejero V.|||Gomez M.D.|||Mayda E.|||Tornero P.|||Vera P.
http://togogenome.org/gene/4081:TPS36 ^@ http://purl.uniprot.org/uniprot/G5CV42 ^@ 21813655 ^@ Plant Physiol. ^@ The tomato terpene synthase gene family. ^@ Akhtar T.A.|||Bleeker P.M.|||Bonini M.E.|||Falara V.|||Last R.L.|||Matsuba Y.|||Nguyen T.T.|||Nguyen T.T.H.|||Pichersky E.|||Schauvinhold I.|||Schilmiller A.L.|||Schuurink R.C.|||Spyropoulou E.A.
http://togogenome.org/gene/4081:MPK9 ^@ http://purl.uniprot.org/uniprot/D9J1Y9 ^@ 22306326 ^@ Gene ^@ Genome-wide analysis of the mitogen-activated protein kinase gene family in Solanum lycopersicum. ^@ Cheng L.|||Kong F.|||Liu S.|||Lu G.|||Peng Z.|||Wang J.|||Wu J.
http://togogenome.org/gene/4081:LOC100191118 ^@ http://purl.uniprot.org/uniprot/B2YHV8 ^@ 18469814 ^@ Nat Genet|||Nat. Genet. ^@ Regulatory change in YABBY-like transcription factor led to evolution of extreme fruit size during tomato domestication. ^@ Barrero L.S.|||Cong B.|||Tanksley S.D.
http://togogenome.org/gene/4081:STP18 ^@ http://purl.uniprot.org/uniprot/K4DBS0 ^@ 24833026 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ The sugar transporter inventory of tomato: genome-wide identification and expression analysis. ^@ Akiyama M.|||Aoki K.|||Koh A.|||Makino H.|||Reuscher S.|||Shibata D.|||Shiratake K.|||Yasuda T.
http://togogenome.org/gene/4081:IAA10 ^@ http://purl.uniprot.org/uniprot/G9HPW5 ^@ 22368074 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ Genome-Wide Identification, Functional Analysis and Expression Profiling of the Aux/IAA Gene Family in Tomato.|||Genome-wide identification, functional analysis and expression profiling of the Aux/IAA gene family in tomato. ^@ Audran-Delalande C.|||Bassa C.|||Bouzayen M.|||Mila I.|||Regad F.|||Zouine M.
http://togogenome.org/gene/4081:GA2ox3 ^@ http://purl.uniprot.org/uniprot/A4GVL7 ^@ 17660355 ^@ Plant Physiol|||Plant Physiol. ^@ Gibberellin regulation of fruit set and growth in tomato. ^@ Fos M.|||Garcia-Martinez J.L.|||Ruiz-Rivero O.|||Sanjuan R.|||Serrani J.C.
http://togogenome.org/gene/4081:LEA14 ^@ http://purl.uniprot.org/uniprot/Q40159 ^@ 8580972 ^@ Plant J|||Plant J. ^@ A molecular study of root-knot nematode-induced feeding sites. ^@ De Almeida Engler J.|||Gheysen G.|||Inze D.|||Van Montagu M.|||Van der Eycken W.|||de Almeida Engler J.
http://togogenome.org/gene/4081:LOC778318 ^@ http://purl.uniprot.org/uniprot/Q53U39 ^@ 20350329 ^@ BMC Genomics ^@ Large-scale analysis of full-length cDNAs from the tomato (Solanum lycopersicum) cultivar Micro-Tom, a reference system for the Solanaceae genomics. ^@ Aoki K.|||Arie T.|||Egusa M.|||Ezura H.|||Fukushima S.|||Ichinose Y.|||Kawamura S.|||Kikuchi M.|||Kodama M.|||Kohara Y.|||Kurabayashi A.|||Narita T.|||Okabe A.|||Omura T.|||Ooga K.|||Sakurai N.|||Sato Y.|||Satoh S.|||Shibata D.|||Shin-I T.|||Shin-i T.|||Suda K.|||Suzuki A.|||Suzuki T.|||Takahashi H.|||Torii M.|||Tsugane T.|||Watanabe M.|||Watanabe Y.|||Yamamoto N.|||Yano K.|||Yazawa K.
http://togogenome.org/gene/4081:SlArf/Xyl1 ^@ http://purl.uniprot.org/uniprot/H1AC30 ^@ 23782392 ^@ Physiol Plant|||Physiol. Plantarum ^@ Heterologous expression of tomato glycoside hydrolase family 3 ?-L-arabinofuranosidase/?-xylosidases in tobacco suspension cultured cells and synergic action of a family 51 isozyme under antisense suppression of the enzyme.|||Heterologous expression of tomato glycoside hydrolase family 3 alpha-L-arabinofuranosidase/beta-xylosidases in tobacco suspension cultured cells and synergic action of a family 51 isozyme under antisense suppression of the enzyme. ^@ Inoue H.|||Kamiyoshihara Y.|||Kanayama Y.|||Matsuno J.|||Miyohashi F.|||Nomura K.|||Shiba H.|||Tateishi A.|||Watanabe K.
http://togogenome.org/gene/4081:p69c ^@ http://purl.uniprot.org/uniprot/O65834 ^@ 10350089 ^@ Plant Mol. Biol. ^@ Characterization of the subtilase gene family in tomato (Lycopersicon esculentum Mill.). ^@ Amrhein N.|||Meichtry J.|||Schaller A.
http://togogenome.org/gene/4081:LOC543598 ^@ http://purl.uniprot.org/uniprot/Q9XFB3 ^@ 11352462 ^@ Plant Mol Biol|||Plant Mol. Biol. ^@ Two iron-regulated cation transporters from tomato complement metal uptake-deficient yeast mutants. ^@ Buckhout T.J.|||Eckhardt U.|||Mas Marques A.
http://togogenome.org/gene/4081:AGO7 ^@ http://purl.uniprot.org/uniprot/I7BBC5 ^@ 23001036 ^@ Plant Cell ^@ Failure of the Tomato Trans-Acting Short Interfering RNA Program to Regulate AUXIN RESPONSE FACTOR3 and ARF4 Underlies the Wiry Leaf Syndrome.|||Failure of the tomato trans-acting short interfering RNA program to regulate AUXIN RESPONSE FACTOR3 and ARF4 underlies the wiry leaf syndrome. ^@ Alvarez J.P.|||Amsellem Z.|||Eshed Y.|||Friedlander G.|||Pekker I.|||Peled D.|||Pistunov A.|||Sabban M.|||Wachsman G.|||Yifhar T.
http://togogenome.org/gene/4081:LIN8 ^@ http://purl.uniprot.org/uniprot/Q8LRN6 ^@ 12586884 ^@ Plant Physiol|||Plant Physiol. ^@ Functional divergence of a syntenic invertase gene family in tomato, potato, and Arabidopsis. ^@ Fridman E.|||Zamir D.
http://togogenome.org/gene/4081:LyesC2p055 ^@ http://purl.uniprot.org/uniprot/A0A0C5CED2|||http://purl.uniprot.org/uniprot/Q2MI86 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LOC101260522 ^@ http://purl.uniprot.org/uniprot/A0A3Q7FV98 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:KPP ^@ http://purl.uniprot.org/uniprot/Q5DK69 ^@ 15860008 ^@ Plant J|||Plant J. ^@ Kinase partner protein interacts with the LePRK1 and LePRK2 receptor kinases and plays a role in polarized pollen tube growth. ^@ Cotter R.|||Kaothien P.|||Kelley D.|||Kiriakopolos S.|||McCormick S.|||Muschietti J.|||Ok S.H.|||Shuai B.|||Wengier D.
http://togogenome.org/gene/4081:DEAD31 ^@ http://purl.uniprot.org/uniprot/K4CXT4 ^@ 26241658 ^@ PLoS ONE|||PLoS One ^@ SlDEAD31, a Putative DEAD-Box RNA Helicase Gene, Regulates Salt and Drought Tolerance and Stress-Related Genes in Tomato. ^@ Chen G.|||Dong T.|||Hu Z.|||Wang L.|||Zhang J.|||Zhao Z.|||Zhu M.
http://togogenome.org/gene/4081:LyesC2p050 ^@ http://purl.uniprot.org/uniprot/A0A0C5CED5|||http://purl.uniprot.org/uniprot/Q2MI81 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:loxD ^@ http://purl.uniprot.org/uniprot/Q96574 ^@ 9232884 ^@ Plant Physiol|||Plant Physiol. ^@ A gene encoding a chloroplast-targeted lipoxygenase in tomato leaves is transiently induced by wounding, systemin, and methyl jasmonate. ^@ Bergey D.R.|||Heitz T.|||Ryan C.A.
http://togogenome.org/gene/4081:LOC101262971 ^@ http://purl.uniprot.org/uniprot/K4D2U1 ^@ 26248665 ^@ J Exp Bot|||J. Exp. Bot. ^@ L-type lectin receptor kinases in Nicotiana benthamiana and tomato and their role in Phytophthora resistance. ^@ Bouwmeester K.|||Govers F.|||Wang Y.|||Weide R.
http://togogenome.org/gene/4081:NAM ^@ http://purl.uniprot.org/uniprot/B8XS01 ^@ 19095941|||19176589 ^@ Development|||Science ^@ A conserved molecular framework for compound leaf development.|||The NAC-domain transcription factor GOBLET specifies leaflet boundaries in compound tomato leaves. ^@ Alvarez J.P.|||Berger Y.|||Blein T.|||Brand A.|||Eshed Y.|||Harpaz-Saad S.|||Hay A.|||Johansen I.E.|||Laufs P.|||Melnik H.|||Morin H.|||Nikovics K.|||Ori N.|||Pulido A.|||Samach A.|||Sirding N.|||Tsiantis M.|||Vialette-Guiraud A.|||Zinder M.
http://togogenome.org/gene/4081:SlIPT4 ^@ http://purl.uniprot.org/uniprot/I0IUP8 ^@ 22865911 ^@ J Exp Bot|||J. Exp. Bot. ^@ Roles and regulation of cytokinins in tomato fruit development. ^@ Fukuda M.|||Honda I.|||Imanishi S.|||Kikuchi K.|||Matsuo S.
http://togogenome.org/gene/4081:LOC101247574 ^@ http://purl.uniprot.org/uniprot/A0A3Q7INK3 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:LOC543969 ^@ http://purl.uniprot.org/uniprot/Q40140 ^@ 8843949 ^@ Plant Mol Biol|||Plant Mol. Biol. ^@ Molecular cloning of a tomato leaf cDNA encoding an aspartic protease, a systemic wound response protein. ^@ Ryan C.A.|||Schaller A.
http://togogenome.org/gene/4081:IAA8 ^@ http://purl.uniprot.org/uniprot/G9HPW3 ^@ 22368074 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ Genome-Wide Identification, Functional Analysis and Expression Profiling of the Aux/IAA Gene Family in Tomato.|||Genome-wide identification, functional analysis and expression profiling of the Aux/IAA gene family in tomato. ^@ Audran-Delalande C.|||Bassa C.|||Bouzayen M.|||Mila I.|||Regad F.|||Zouine M.
http://togogenome.org/gene/4081:p69F ^@ http://purl.uniprot.org/uniprot/Q9LWA3 ^@ 10631250 ^@ Plant Physiol|||Plant Physiol. ^@ Characterization of P69E and P69F, two differentially regulated genes encoding new members of the subtilisin-like proteinase family from tomato plants. ^@ Conejero V.|||Jorda L.|||Vera P.
http://togogenome.org/gene/4081:GAI ^@ http://purl.uniprot.org/uniprot/Q7Y1B6 ^@ 15347801 ^@ Plant Physiol. ^@ Down-regulation of della genes is not essential for germination of tomato, soybean, and Arabidopsis seeds. ^@ Bassel G.W.|||Bewley J.D.|||Mullen R.T.|||Zielinska E.
http://togogenome.org/gene/4081:Mi-1E ^@ http://purl.uniprot.org/uniprot/A1Y9R0 ^@ 17318492 ^@ Theor Appl Genet|||Theor. Appl. Genet. ^@ Introgressed and endogenous Mi-1 gene clusters in tomato differ by complex rearrangements in flanking sequences and show sequence exchange and diversifying selection among homologues. ^@ Seah S.|||Telleen A.C.|||Williamson V.M.
http://togogenome.org/gene/4081:LOC543709 ^@ http://purl.uniprot.org/uniprot/Q8S459 ^@ 11937514 ^@ J. Biol. Chem. ^@ Identification and characterization of a sphingolipid delta 4-desaturase family. ^@ Franke S.|||Heinz E.|||Sperling P.|||Ternes P.|||Zaehringer U.
http://togogenome.org/gene/4081:LyesC2p085 ^@ http://purl.uniprot.org/uniprot/A0A0C5CE96|||http://purl.uniprot.org/uniprot/Q2MIB6 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LOC544282 ^@ http://purl.uniprot.org/uniprot/Q96489 ^@ 9520279 ^@ Plant Mol Biol|||Plant Mol. Biol. ^@ Molecular cloning of a novel heat induced/chilling tolerance related cDNA in tomato fruit by use of mRNA differential display. ^@ Dilley D.R.|||Kadyrzhanova D.K.|||Ververidis P.|||Vlachonasios K.E.
http://togogenome.org/gene/4081:CDKC ^@ http://purl.uniprot.org/uniprot/Q93X47 ^@ 11500540 ^@ Plant Physiol|||Plant Physiol. ^@ A new C-type cyclin-dependent kinase from tomato expressed in dividing tissues does not interact with mitotic and G1 cyclins. ^@ Chevalier C.|||Delmas F.|||Hernould M.|||Joubes J.|||Lemaire-Chamley M.|||Mouras A.|||Raymond P.|||Walter J.
http://togogenome.org/gene/4081:CHI14 ^@ http://purl.uniprot.org/uniprot/Q05537|||http://purl.uniprot.org/uniprot/Q42878 ^@ 8400122|||8639749 ^@ Plant Mol Biol|||Plant Mol. Biol. ^@ An endochitinase gene expressed at high levels in the stylar transmitting tissue of tomatoes.|||Molecular characterization of four chitinase cDNAs obtained from Cladosporium fulvum-infected tomato. ^@ Danhash N.|||Gasser C.S.|||Harikrishna K.|||Jampates-Beale R.|||Milligan S.B.|||Wagemakers C.A.M.|||de Wit P.J.G.M.|||van Kan J.A.L.
http://togogenome.org/gene/4081:LyesC2p015 ^@ http://purl.uniprot.org/uniprot/A0A0C5CEF9|||http://purl.uniprot.org/uniprot/Q2MI48 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LOC100736469 ^@ http://purl.uniprot.org/uniprot/F1JYZ6 ^@ 21867679 ^@ Biochem Biophys Res Commun|||Biochem. Biophys. Res. Commun. ^@ The plant cell death suppressor Adi3 interacts with the autophagic protein Atg8h. ^@ Devarenne T.P.
http://togogenome.org/gene/4081:LOC100037511 ^@ http://purl.uniprot.org/uniprot/A1Z368 ^@ 18542997 ^@ Planta ^@ A GAMYB-like gene in tomato and its expression during seed germination. ^@ Bewley D.J.|||Bewley J.D.|||Gong X.
http://togogenome.org/gene/4081:LOC101268775 ^@ http://purl.uniprot.org/uniprot/K4CG62 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:CCR1 ^@ http://purl.uniprot.org/uniprot/Q4U1I5 ^@ 16551686 ^@ J Exp Bot|||J. Exp. Bot. ^@ Down-regulation of cinnamoyl-CoA reductase in tomato (Solanum lycopersicum L.) induces dramatic changes in soluble phenolic pools. ^@ Boudet A.M.|||Danoun S.|||Rochange S.F.|||van der Rest B.
http://togogenome.org/gene/4081:CTR3 ^@ http://purl.uniprot.org/uniprot/Q5YKK5 ^@ 15284494 ^@ Plant Mol Biol|||Plant Mol. Biol. ^@ Evidence that CTR1-mediated ethylene signal transduction in tomato is encoded by a multigene family whose members display distinct regulatory features. ^@ Adams-Phillips L.|||Barry C.|||Bouzayen M.|||Giovannoni J.|||Kannan P.|||Leclercq J.
http://togogenome.org/gene/4081:LOC100037512 ^@ http://purl.uniprot.org/uniprot/A1Z369 ^@ 18542997 ^@ Planta ^@ A GAMYB-like gene in tomato and its expression during seed germination. ^@ Bewley D.J.|||Bewley J.D.|||Gong X.
http://togogenome.org/gene/4081:LOC101248665 ^@ http://purl.uniprot.org/uniprot/K4BNG7 ^@ 29760199 ^@ Plant Physiol. ^@ The NAC transcription factor SlNAP2 regulates leaf senescence and fruit yield in tomato. ^@ Balazadeh S.|||Fernie A.R.|||Ma X.|||Mueller-Roeber B.|||Tureckova V.|||Xue G.-P.|||Zhang Y.
http://togogenome.org/gene/4081:LyesC2p009 ^@ http://purl.uniprot.org/uniprot/Q2MI42 ^@ 16575560|||16830097 ^@ J. Mol. Evol.|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.
http://togogenome.org/gene/4081:cMDH ^@ http://purl.uniprot.org/uniprot/Q645N0 ^@ 15665243 ^@ Plant Physiol|||Plant Physiol. ^@ Enhanced photosynthetic performance and growth as a consequence of decreasing mitochondrial malate dehydrogenase activity in transgenic tomato plants. ^@ Carrari F.|||Fernie A.R.|||Loureiro M.E.|||Lytovchenko A.|||Nunes-Nesi A.|||Ratcliffe R.G.|||Smith A.M.|||Sweetlove L.J.
http://togogenome.org/gene/4081:SN2 ^@ http://purl.uniprot.org/uniprot/E5KBY0 ^@ 21479554 ^@ Transgenic Res|||Transgenic Res. ^@ Over-expression of snakin-2 and extensin-like protein genes restricts pathogen invasiveness and enhances tolerance to Clavibacter michiganensis subsp. michiganensis in transgenic tomato (Solanum lycopersicum). ^@ Balaji V.|||Smart C.D.
http://togogenome.org/gene/4081:Fni3 ^@ http://purl.uniprot.org/uniprot/K4CGU0 ^@ 24076975|||27909045 ^@ Plant Cell|||Plant Physiol|||Plant Physiol. ^@ A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity.|||The tomato Fni3 lysine-63-specific ubiquitin-conjugating enzyme and suv ubiquitin E2 variant positively regulate plant immunity. ^@ Brady J.J.|||Chen X.|||Connor R.A.|||Gough J.|||Hamera S.|||Liu Y.|||Martin G.B.|||Mural R.V.|||Oates M.E.|||Rosebrock T.R.|||Zeng L.|||Zhou B.
http://togogenome.org/gene/4081:THM27 ^@ http://purl.uniprot.org/uniprot/Q43525 ^@ 8639738 ^@ Plant Mol Biol|||Plant Mol. Biol. ^@ Cloning and initial characterization of 14 myb-related cDNAs from tomato (Lycopersicon esculentum cv. Ailsa Craig). ^@ Hamilton W.D.|||Lin Q.|||Merryweather A.
http://togogenome.org/gene/4081:Asc-1 ^@ http://purl.uniprot.org/uniprot/Q9M6A3 ^@ 10781105|||12445127 ^@ Plant J.|||Proc. Natl. Acad. Sci. U.S.A. ^@ A longevity assurance gene homolog of tomato mediates resistance to Alternaria alternata f. sp. lycopersici toxins and fumonisin B1.|||The plant disease resistance gene Asc-1 prevents disruption of sphingolipid metabolism during AAL-toxin-induced programmed cell death. ^@ Brandwagt B.F.|||Hille J.|||Kneppers T.J.A.|||Laurent P.L.|||Markham J.E.|||Mesbah L.A.|||Nijkamp H.J.J.|||Spassieva S.D.|||Takken F.L.W.
http://togogenome.org/gene/4081:LyesC2p060 ^@ http://purl.uniprot.org/uniprot/Q2MI91 ^@ 16575560|||16830097|||18441214 ^@ J. Mol. Evol.|||Plant Cell|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Plastid transcriptomics and translatomics of tomato fruit development and chloroplast-to-chromoplast differentiation: chromoplast gene expression largely serves the production of a single protein.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.
http://togogenome.org/gene/4081:CRY1a ^@ http://purl.uniprot.org/uniprot/Q9XHD8 ^@ 10417705|||10809448 ^@ Plant J|||Plant J.|||Plant Mol Biol|||Plant Mol. Biol. ^@ Cryptochrome 1 controls tomato development in response to blue light.|||Tomato contains homologues of Arabidopsis cryptochromes 1 and 2. ^@ Ahmad M.|||Cashmore A.R.|||Flamma F.|||Giuliano G.|||Kendrick R.E.|||Miarelli C.|||Nebuloso E.|||Ninu L.|||Perrotta G.|||Weller J.L.
http://togogenome.org/gene/4081:XIP1-1-beta ^@ http://purl.uniprot.org/uniprot/E3UMZ8|||http://purl.uniprot.org/uniprot/E3UMZ9 ^@ 21241387|||24260152 ^@ PLoS ONE|||PLoS One|||Plant J|||Plant J. ^@ Genome-wide identification and expression analysis of aquaporins in tomato.|||Solanaceae XIPs are plasma membrane aquaporins that facilitate the transport of many uncharged substrates. ^@ Akiyama M.|||Aoki K.|||Bienert G.P.|||Bienert M.D.|||Boutry M.|||Chaumont F.|||Jahn T.P.|||Mori C.|||Reuscher S.|||Shibata D.|||Shiratake K.
http://togogenome.org/gene/4081:Frk1 ^@ http://purl.uniprot.org/uniprot/O04897 ^@ 9112782 ^@ Plant Physiol. ^@ Divergent fructokinase genes are differentially expressed in tomato. ^@ Bennett A.B.|||Dai N.|||Granot D.|||Kanayama Y.|||Petreikov M.|||Schaffer A.
http://togogenome.org/gene/4081:vis1 ^@ http://purl.uniprot.org/uniprot/Q8L470 ^@ 12586896 ^@ Plant Physiol|||Plant Physiol. ^@ A novel small heat shock protein gene, vis1, contributes to pectin depolymerization and juice viscosity in tomato fruit. ^@ Deng Z.|||Ding C.K.|||Handa A.K.|||Ozminkowski R.H. Jr|||Ozminkowski R.H. Jr.|||Ramakrishna W.
http://togogenome.org/gene/4081:MKK4 ^@ http://purl.uniprot.org/uniprot/Q66MH6 ^@ 15371431 ^@ J Biol Chem|||J. Biol. Chem. ^@ Identification of MAPKs and their possible MAPK kinase activators involved in the Pto-mediated defense response of tomato. ^@ Martin G.B.|||Pedley K.F.
http://togogenome.org/gene/4081:SlMYB117 ^@ http://purl.uniprot.org/uniprot/K4BWW2 ^@ 23341595 ^@ Proc Natl Acad Sci U S A|||Proc. Natl. Acad. Sci. U.S.A. ^@ Trifoliate encodes an MYB transcription factor that modulates leaf and shoot architecture in tomato. ^@ Martinez C.C.|||Naz A.A.|||Raman S.|||Schmitz G.|||Sinha N.R.|||Theres K.
http://togogenome.org/gene/4081:LOC101250600 ^@ http://purl.uniprot.org/uniprot/A0A3Q7GMA5 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:INT4 ^@ http://purl.uniprot.org/uniprot/K4D649 ^@ 24833026 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ The sugar transporter inventory of tomato: genome-wide identification and expression analysis. ^@ Akiyama M.|||Aoki K.|||Koh A.|||Makino H.|||Reuscher S.|||Shibata D.|||Shiratake K.|||Yasuda T.
http://togogenome.org/gene/4081:ADH2 ^@ http://purl.uniprot.org/uniprot/P28032 ^@ 1765164|||7811967|||8428654 ^@ FEBS Lett.|||Gene|||Plant Mol. Biol. ^@ Isolation of a tomato alcohol dehydrogenase 2-encoding cDNA using phage-promoted antibody screening of a plasmid cDNA library.|||Structure of the tomato Adh2 gene and Adh2 pseudogenes, and a study of Adh2 gene expression in fruit.|||Tomato alcohol dehydrogenase. Expression during fruit ripening and under hypoxic conditions. ^@ Alexander D.C.|||Brady C.|||Chase T. Jr.|||Genez A.L.|||Gielen J.|||Hinde R.|||Lee E.|||Longhurst T.|||Pousada R.A.R.|||Rejda V.M.|||Speirs J.|||Staraci L.C.|||Williams B.G.|||Williamson V.M.|||van Montagu M.|||van der Straeten D.
http://togogenome.org/gene/4081:TAGL1 ^@ http://purl.uniprot.org/uniprot/E9JUM2 ^@ 21203447 ^@ PLoS ONE|||PLoS One ^@ Functional analysis of the Arlequin mutant corroborates the essential role of the Arlequin/TAGL1 gene during reproductive development of tomato. ^@ Angosto T.|||Anton M.T.|||Atares A.|||Capel J.|||Garcia-Sogo B.|||Gimenez E.|||Lozano R.|||Moreno V.|||Perez-Martin F.|||Pineda B.
http://togogenome.org/gene/4081:LOC778315 ^@ http://purl.uniprot.org/uniprot/Q53U42 ^@ 24260152 ^@ PLoS ONE|||PLoS One ^@ Genome-wide identification and expression analysis of aquaporins in tomato. ^@ Akiyama M.|||Aoki K.|||Mori C.|||Reuscher S.|||Shibata D.|||Shiratake K.
http://togogenome.org/gene/4081:Mi-1B ^@ http://purl.uniprot.org/uniprot/A1Y9Q8 ^@ 17318492 ^@ Theor Appl Genet|||Theor. Appl. Genet. ^@ Introgressed and endogenous Mi-1 gene clusters in tomato differ by complex rearrangements in flanking sequences and show sequence exchange and diversifying selection among homologues. ^@ Seah S.|||Telleen A.C.|||Williamson V.M.
http://togogenome.org/gene/4081:LOC543943 ^@ http://purl.uniprot.org/uniprot/Q6DQL1 ^@ 16270230 ^@ Plant Mol. Biol. ^@ Identification and characterisation of the alpha and beta subunits of succinyl CoA ligase of tomato. ^@ Carrari F.|||Fernie A.R.|||Frankel N.|||Gibon Y.|||Studart-Guimaraes C.|||Wood C.C.|||Zanor M.I.
http://togogenome.org/gene/4081:CPT3 ^@ http://purl.uniprot.org/uniprot/K7WCI9 ^@ 23134568 ^@ Plant J. ^@ The tomato cis-prenyltransferase gene family. ^@ Akhtar T.A.|||Klein S.E.|||Lees H.A.|||Matsuba Y.|||Pichersky E.|||Schauvinhold I.|||Yu G.
http://togogenome.org/gene/4081:Ls ^@ http://purl.uniprot.org/uniprot/Q9ZSP2 ^@ 11283350|||9874811 ^@ Plant Cell|||Proc Natl Acad Sci U S A|||Proc. Natl. Acad. Sci. U.S.A. ^@ Comparative sequence analysis reveals extensive microcolinearity in the lateral suppressor regions of the tomato, Arabidopsis, and Capsella genomes.|||The Lateral suppressor (Ls) gene of tomato encodes a new member of the VHIID protein family. ^@ Acarkan A.|||Herrero R.|||Rossberg M.|||Schmidt R.|||Schmitt T.|||Schmitz G.|||Schumacher K.|||Theres K.
http://togogenome.org/gene/4081:LOC101262710 ^@ http://purl.uniprot.org/uniprot/K4BPJ6 ^@ 27909045 ^@ Plant Physiol|||Plant Physiol. ^@ A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity. ^@ Chen X.|||Connor R.A.|||Gough J.|||Martin G.B.|||Mural R.V.|||Oates M.E.|||Zeng L.|||Zhou B.
http://togogenome.org/gene/4081:ANT1 ^@ http://purl.uniprot.org/uniprot/Q6V7V0 ^@ 12897245|||18344529 ^@ J Hered|||J. Hered.|||Plant Cell ^@ Activation tagging in tomato identifies a transcriptional regulator of anthocyanin biosynthesis, modification, and transport.|||Molecular aspects of Anthocyanin fruit tomato in relation to high pigment-1. ^@ Caldwell C.G.|||Chen L.|||Clendennen S.K.|||Connors K.|||Evenor D.|||Levin I.|||Lightner J.|||Liu X.L.|||Matheis N.|||Mathews H.|||Meir A.|||Menasco D.J.|||Nahon S.|||Oren-Shamir M.|||Ovadia R.|||Reuveni M.|||Sapir M.|||Schuster D.K.|||Shlomo H.|||Tadmor Y.|||Wagner D.R.|||Wagoner W.
http://togogenome.org/gene/4081:ICE1a ^@ http://purl.uniprot.org/uniprot/K4C861 ^@ 24184451 ^@ Plant Physiol Biochem|||Plant Physiol. Biochem. ^@ A novel tomato MYC-type ICE1-like transcription factor, SlICE1a, confers cold, osmotic and salt tolerance in transgenic tobacco. ^@ Chai S.|||Feng H.L.|||Ma N.N.|||Meng Q.W.|||Meng X.|||Wang J.R.|||Zhang S.
http://togogenome.org/gene/4081:LOC100736478 ^@ http://purl.uniprot.org/uniprot/F8SS64 ^@ 22211518 ^@ Plant J|||Plant J. ^@ Evaluating auxin distribution in tomato (Solanum lycopersicum) through an analysis of the PIN and AUX/LAX gene families. ^@ Catala C.|||Pattison R.J.
http://togogenome.org/gene/4081:LyesC2p066 ^@ http://purl.uniprot.org/uniprot/A0A0C5CHE1|||http://purl.uniprot.org/uniprot/Q2MI97 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:fsm1 ^@ http://purl.uniprot.org/uniprot/Q9LEG4 ^@ 15599593 ^@ Planta ^@ The tomato early fruit specific gene Lefsm1 defines a novel class of plant-specific SANT/MYB domain proteins. ^@ Barg R.|||Chmelnitsky I.|||Eilon T.|||Grotewold E.|||Gur A.|||Salts Y.|||Shabtai S.|||Sobolev I.
http://togogenome.org/gene/4081:LyesC2p081 ^@ http://purl.uniprot.org/uniprot/A0A0C5CEA2|||http://purl.uniprot.org/uniprot/Q2MIB2 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:hdc ^@ http://purl.uniprot.org/uniprot/P54772 ^@ 8219096 ^@ Plant Mol. Biol. ^@ A histidine decarboxylase-like mRNA is involved in tomato fruit ripening. ^@ Barton S.L.|||Gray J.E.|||Grierson D.|||Lowe A.|||Payton S.|||Picton S.
http://togogenome.org/gene/4081:IAA32 ^@ http://purl.uniprot.org/uniprot/G9HPX3 ^@ 22368074 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ Genome-Wide Identification, Functional Analysis and Expression Profiling of the Aux/IAA Gene Family in Tomato.|||Genome-wide identification, functional analysis and expression profiling of the Aux/IAA gene family in tomato. ^@ Audran-Delalande C.|||Bassa C.|||Bouzayen M.|||Mila I.|||Regad F.|||Zouine M.
http://togogenome.org/gene/4081:AOC ^@ http://purl.uniprot.org/uniprot/Q9LEG5 ^@ 10764787 ^@ J Biol Chem|||J. Biol. Chem. ^@ Molecular cloning of allene oxide cyclase. The enzyme establishing the stereochemistry of octadecanoids and jasmonates. ^@ Ganal M.|||Grimm R.|||Hamberg M.|||Hause B.|||Maucher H.|||Stenzel I.|||Wasternack C.|||Ziegler J.
http://togogenome.org/gene/4081:TPS24 ^@ http://purl.uniprot.org/uniprot/G5CV50 ^@ 21813655 ^@ Plant Physiol. ^@ The tomato terpene synthase gene family. ^@ Akhtar T.A.|||Bleeker P.M.|||Bonini M.E.|||Falara V.|||Last R.L.|||Matsuba Y.|||Nguyen T.T.|||Nguyen T.T.H.|||Pichersky E.|||Schauvinhold I.|||Schilmiller A.L.|||Schuurink R.C.|||Spyropoulou E.A.
http://togogenome.org/gene/4081:PP2Ac2 ^@ http://purl.uniprot.org/uniprot/Q6VUQ5 ^@ 15125764 ^@ Plant J|||Plant J. ^@ Silencing of subfamily I of protein phosphatase 2A catalytic subunits results in activation of plant defense responses and localized cell death. ^@ Anderson J.C.|||Gu Y.Q.|||He X.|||Martin G.B.|||Tang X.|||del Pozo O.
http://togogenome.org/gene/4081:PHYB1 ^@ http://purl.uniprot.org/uniprot/Q9ZS62 ^@ 9869419 ^@ Plant Mol. Biol. ^@ Characterization of tomato PHYB1 and identification of molecular defects in four mutant alleles. ^@ Brandstaedter J.|||Cordonnier-Pratt M.-M.|||Frances S.|||Hughes M.J.G.|||Kendrick R.E.|||Kubota T.|||Lazarova G.I.|||Matsui M.|||Peters J.L.|||Pratt L.H.|||Szell M.
http://togogenome.org/gene/4081:PSBO ^@ http://purl.uniprot.org/uniprot/P23322 ^@ 2101691 ^@ Plant Mol. Biol. ^@ Isolation and characterization of cDNAs from Lycopersicon esculentum and Arabidopsis thaliana encoding the 33 kDa protein of the photosystem II-associated oxygen-evolving complex. ^@ Bennett J.|||Cashmore A.R.|||Granell A.|||Ko K.
http://togogenome.org/gene/4081:LOC101251676 ^@ http://purl.uniprot.org/uniprot/A0A3Q7HBJ5 ^@ 20350329|||28194155 ^@ BMC Genomics|||Front. Plant Sci. ^@ Functional characterization of CYP716 family P450 enzymes in triterpenoid biosynthesis in tomato.|||Large-scale analysis of full-length cDNAs from the tomato (Solanum lycopersicum) cultivar Micro-Tom, a reference system for the Solanaceae genomics. ^@ Aoki K.|||Arie T.|||Egusa M.|||Ezura H.|||Fukushima E.O.|||Fukushima S.|||Ichinose Y.|||Kawamura S.|||Kikuchi M.|||Kodama M.|||Kohara Y.|||Kurabayashi A.|||Muranaka T.|||Narita T.|||Okabe A.|||Omura T.|||Ooga K.|||Sakurai N.|||Sato Y.|||Satoh S.|||Seki H.|||Shibata D.|||Shimizu Y.|||Shin-I T.|||Shin-i T.|||Suda K.|||Suzuki A.|||Suzuki T.|||Takahashi H.|||Torii M.|||Tsugane T.|||Watanabe M.|||Watanabe Y.|||Yamamoto N.|||Yano K.|||Yasumoto S.|||Yazawa K.
http://togogenome.org/gene/4081:LOC101259178 ^@ http://purl.uniprot.org/uniprot/V5YM55 ^@ 24260152 ^@ PLoS ONE|||PLoS One ^@ Genome-wide identification and expression analysis of aquaporins in tomato. ^@ Akiyama M.|||Aoki K.|||Mori C.|||Reuscher S.|||Shibata D.|||Shiratake K.
http://togogenome.org/gene/4081:LOC101246974 ^@ http://purl.uniprot.org/uniprot/G1JUH5 ^@ 21813655 ^@ Plant Physiol. ^@ The tomato terpene synthase gene family. ^@ Akhtar T.A.|||Bleeker P.M.|||Bonini M.E.|||Falara V.|||Last R.L.|||Matsuba Y.|||Nguyen T.T.|||Nguyen T.T.H.|||Pichersky E.|||Schauvinhold I.|||Schilmiller A.L.|||Schuurink R.C.|||Spyropoulou E.A.
http://togogenome.org/gene/4081:9612 ^@ http://purl.uniprot.org/uniprot/P24396 ^@ 2277637 ^@ Mol. Gen. Genet. ^@ Regulation of a stylar transmitting tissue-specific gene in wild-type and transgenic tomato and tobacco. ^@ Budelier K.A.|||Gasser C.S.|||Smith A.G.
http://togogenome.org/gene/4081:ACA10 ^@ http://purl.uniprot.org/uniprot/G3LY22 ^@ 21917547 ^@ Plant Cell ^@ Function and Evolution of a MicroRNA That Regulates a Ca2+-ATPase and Triggers the Formation of Phased Small Interfering RNAs in Tomato Reproductive Growth.|||Function and evolution of a MicroRNA that regulates a Ca2+-ATPase and triggers the formation of phased small interfering RNAs in tomato reproductive growth. ^@ Ding B.|||Itaya A.|||Olmstead R.|||Qi Y.|||Wang Y.|||Wu Y.|||Zhang J.|||Zhong X.|||van der Knaap E.
http://togogenome.org/gene/4081:LOC101252912 ^@ http://purl.uniprot.org/uniprot/Q8VZZ7 ^@ 11719578 ^@ Mol Biol Evol|||Mol. Biol. Evol. ^@ Mitochondrial gene transfer in pieces: fission of the ribosomal protein gene rpl2 and partial or complete gene transfer to the nucleus. ^@ Adams K.L.|||Ong H.C.|||Palmer J.D.
http://togogenome.org/gene/4081:ARF13 ^@ http://purl.uniprot.org/uniprot/E3USC4|||http://purl.uniprot.org/uniprot/E3USC5 ^@ 21735233 ^@ Plant Cell Rep. ^@ Identification, isolation and expression analysis of auxin response factor (ARF) genes in Solanum lycopersicum. ^@ Cheng L.|||Kong F.|||Liu S.|||Lu G.|||Peng Z.|||Wang F.|||Wu J.|||Yu X.
http://togogenome.org/gene/4081:CAB6A ^@ http://purl.uniprot.org/uniprot/P12360 ^@ 3321058 ^@ Proc. Natl. Acad. Sci. U.S.A. ^@ A cDNA clone encoding a photosystem I protein with homology to photosystem II chlorophyll a/b-binding polypeptides. ^@ Cashmore A.R.|||Castresana C.|||Darr S.C.|||Hoffman N.E.|||Ko K.|||Malik V.S.|||Pichersky E.
http://togogenome.org/gene/4081:LOC101265312 ^@ http://purl.uniprot.org/uniprot/A0A3Q7JRW8 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:MAPK10 ^@ http://purl.uniprot.org/uniprot/F8UFC0 ^@ 22306326 ^@ Gene ^@ Genome-wide analysis of the mitogen-activated protein kinase gene family in Solanum lycopersicum. ^@ Cheng L.|||Kong F.|||Liu S.|||Lu G.|||Peng Z.|||Wang J.|||Wu J.
http://togogenome.org/gene/4081:SlCKX5 ^@ http://purl.uniprot.org/uniprot/I0IUQ8 ^@ 22865911 ^@ J Exp Bot|||J. Exp. Bot. ^@ Roles and regulation of cytokinins in tomato fruit development. ^@ Fukuda M.|||Honda I.|||Imanishi S.|||Kikuchi K.|||Matsuo S.
http://togogenome.org/gene/4081:tbn1 ^@ http://purl.uniprot.org/uniprot/G3XKQ7 ^@ 21965606 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ Tomato TILLING technology: development of a reverse genetics tool for the efficient isolation of mutants from Micro-Tom mutant libraries. ^@ Ariizumi T.|||Asamizu E.|||Bres C.|||Ezura H.|||Matsukura C.|||Mizoguchi T.|||Okabe Y.|||Rothan C.|||Saito T.
http://togogenome.org/gene/4081:Mi-1C ^@ http://purl.uniprot.org/uniprot/A1Y9Q9 ^@ 17318492 ^@ Theor Appl Genet|||Theor. Appl. Genet. ^@ Introgressed and endogenous Mi-1 gene clusters in tomato differ by complex rearrangements in flanking sequences and show sequence exchange and diversifying selection among homologues. ^@ Seah S.|||Telleen A.C.|||Williamson V.M.
http://togogenome.org/gene/4081:APX2 ^@ http://purl.uniprot.org/uniprot/Q52QQ4 ^@ 16287625 ^@ DNA Seq|||DNA Seq. ^@ Molecular cloning, expression and mapping analysis of a novel cytosolic ascorbate peroxidase gene from tomato. ^@ Li H.X.|||Ouyang B.|||Ye Z.B.|||Zhang J.H.|||Zou L.P.
http://togogenome.org/gene/4081:LOC101250818 ^@ http://purl.uniprot.org/uniprot/A0A2H5AJN7 ^@ 29186488 ^@ J Exp Bot|||J. Exp. Bot. ^@ A putative R3 MYB repressor is the candidate gene underlying atroviolacium, a locus for anthocyanin pigmentation in tomato fruit. ^@ Cao X.|||Du Y.|||Gao J.|||Guo Y.|||Huang Z.|||Liu X.|||Qiu Z.|||Van Giang T.|||Wang G.|||Wang J.|||Wang X.|||Wang X.'
http://togogenome.org/gene/4081:GAD3 ^@ http://purl.uniprot.org/uniprot/B1Q3F2 ^@ 18713763 ^@ Plant Cell Physiol. ^@ Biochemical mechanism on GABA accumulation during fruit development in tomato. ^@ Akama K.|||Akihiro T.|||Aoki K.|||Ashihara H.|||Ezura H.|||Fujimura T.|||Iijima Y.|||Koike S.|||Matsukura C.|||Shibata D.|||Tani R.|||Tominaga T.|||Watanabe S.
http://togogenome.org/gene/4081:LOC778238 ^@ http://purl.uniprot.org/uniprot/Q5DQ95 ^@ 15500462 ^@ Plant J. ^@ Folate synthesis in plants: the last step of the p-aminobenzoate branch is catalyzed by a plastidial aminodeoxychorismate lyase. ^@ Basset G.J.|||Giovannoni J.J.|||Gregory J.F.|||Gregory J.F. 3rd|||Hanson A.D.|||Nichols B.P.|||Quinlivan E.P.|||Ravanel S.|||Rebeille F.|||Seki M.|||Shinozaki K.|||White R.
http://togogenome.org/gene/4081:GLK2 ^@ http://purl.uniprot.org/uniprot/I6RHK0 ^@ 22745430|||24510723 ^@ Plant Cell|||Science ^@ Tomato GOLDEN2-LIKE Transcription Factors Reveal Molecular Gradients That Function during Fruit Development and Ripening.|||Tomato GOLDEN2-LIKE transcription factors reveal molecular gradients that function during fruit development and ripening.|||Uniform ripening encodes a Golden 2-like transcription factor regulating tomato fruit chloroplast development. ^@ Aktas H.|||Ashrafi H.|||Barry C.S.|||Bennett A.B.|||Cheng K.L.|||Chetelat R.|||Fei Z.|||Fernandez-Munoz R.|||Figueroa-Balderas R.|||Gapper N.E.|||Giovannoni J.J.|||Granell A.|||Hill T.|||Liu Y.|||Lopez-Baltazar J.|||Nguyen C.V.|||Pons C.|||Powell A.L.|||Van Deynze A.|||Vicente A.|||Vrebalov J.T.|||Zheng Y.|||Zhong S.
http://togogenome.org/gene/4081:LOC543740 ^@ http://purl.uniprot.org/uniprot/Q9XG52 ^@ 11741041 ^@ J Exp Bot|||J. Exp. Bot. ^@ Regulation of expression of two novel flower-specific genes from tomato (Solanum lycopersicum) by gibberellin. ^@ Barendse G.W.|||Van Lipzig R.H.|||Van den Heuvel K.J.|||Wullems G.J.
http://togogenome.org/gene/4081:PIN10 ^@ http://purl.uniprot.org/uniprot/E5KGD7 ^@ 22211518 ^@ Plant J|||Plant J. ^@ Evaluating auxin distribution in tomato (Solanum lycopersicum) through an analysis of the PIN and AUX/LAX gene families. ^@ Catala C.|||Pattison R.J.
http://togogenome.org/gene/4081:LOC101256570 ^@ http://purl.uniprot.org/uniprot/K4BIZ9 ^@ 21898085 ^@ Planta ^@ SlWRKY70 is required for Mi-1-mediated resistance to aphids and nematodes in tomato. ^@ Atamian H.S.|||Eulgem T.|||Kaloshian I.
http://togogenome.org/gene/4081:TAPG5 ^@ http://purl.uniprot.org/uniprot/O22313 ^@ 9669329 ^@ Mol Gen Genet|||Mol. Gen. Genet. ^@ Genomic organization of six tomato polygalacturonases and 5' upstream sequence identity with tap1 and win2 genes. ^@ Hong S.B.|||Tucker M.L.
http://togogenome.org/gene/4081:ACO4-like ^@ http://purl.uniprot.org/uniprot/Q9ZWP2 ^@ 9847103 ^@ Plant Physiol|||Plant Physiol. ^@ Differential expression and internal feedback regulation of 1-aminocyclopropane-1-carboxylate synthase, 1-aminocyclopropane-1-carboxylate oxidase, and ethylene receptor genes in tomato fruit during development and ripening. ^@ Inaba A.|||Kubo Y.|||Murachi S.|||Nakano R.|||Nakatsuka A.|||Okunishi H.|||Shiomi S.
http://togogenome.org/gene/4081:Dea1 ^@ http://purl.uniprot.org/uniprot/Q6EAL9 ^@ 16361525 ^@ Plant Physiol|||Plant Physiol. ^@ A circadian rhythm-regulated tomato gene is induced by Arachidonic acid and Phythophthora infestans infection. ^@ Bostock R.M.|||Feng Q.|||Gilchrist D.G.|||Pan Z.|||Weyman P.D.
http://togogenome.org/gene/4081:ARG1 ^@ http://purl.uniprot.org/uniprot/Q5UNS2 ^@ 15322128 ^@ J Biol Chem|||J. Biol. Chem. ^@ Regulation of plant arginase by wounding, jasmonate, and the phytotoxin coronatine. ^@ Chen H.|||He S.Y.|||Howe G.A.|||McCaig B.C.|||Melotto M.
http://togogenome.org/gene/4081:LePK4 ^@ http://purl.uniprot.org/uniprot/Q9M728 ^@ 10975647 ^@ Mol Plant Microbe Interact|||Mol. Plant Microbe Interact. ^@ Characterization of a tomato protein kinase gene induced by infection by Potato spindle tuber viroid. ^@ Hammond R.W.|||Zhao Y.
http://togogenome.org/gene/4081:ST1 ^@ http://purl.uniprot.org/uniprot/Q9AT48 ^@ 12937983 ^@ Planta ^@ Cloning of two contrasting high-affinity sulfate transporters from tomato induced by low sulfate and infection by the vascular pathogen Verticillium dahliae. ^@ Davidian J.C.|||Fourcroy P.|||Hawkesford M.J.|||Howarth J.R.|||Smith F.W.
http://togogenome.org/gene/4081:LyesC2p003 ^@ http://purl.uniprot.org/uniprot/A0A0C5CUV9|||http://purl.uniprot.org/uniprot/Q2MI58 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LyesC2p078 ^@ http://purl.uniprot.org/uniprot/A0A0U1ZJT6|||http://purl.uniprot.org/uniprot/Q2MIA9 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:FZY3 ^@ http://purl.uniprot.org/uniprot/D2IGV2 ^@ 21435892 ^@ Plant Physiol Biochem|||Plant Physiol. Biochem. ^@ Gene structure and spatiotemporal expression profile of tomato genes encoding YUCCA-like flavin monooxygenases: The ToFZY gene family.|||Gene structure and spatiotemporal expression profile of tomato genes encoding YUCCA-like flavin monooxygenases: the ToFZY gene family. ^@ Borges A.A.|||Borges-Perez A.|||Exposito-Rodriguez M.|||Perez J.A.
http://togogenome.org/gene/4081:Mi-1F ^@ http://purl.uniprot.org/uniprot/A1Y9R1 ^@ 17318492 ^@ Theor Appl Genet|||Theor. Appl. Genet. ^@ Introgressed and endogenous Mi-1 gene clusters in tomato differ by complex rearrangements in flanking sequences and show sequence exchange and diversifying selection among homologues. ^@ Seah S.|||Telleen A.C.|||Williamson V.M.
http://togogenome.org/gene/4081:Mi-1G ^@ http://purl.uniprot.org/uniprot/A1Y9R2 ^@ 17318492 ^@ Theor Appl Genet|||Theor. Appl. Genet. ^@ Introgressed and endogenous Mi-1 gene clusters in tomato differ by complex rearrangements in flanking sequences and show sequence exchange and diversifying selection among homologues. ^@ Seah S.|||Telleen A.C.|||Williamson V.M.
http://togogenome.org/gene/4081:LOC101263911 ^@ http://purl.uniprot.org/uniprot/A0A3Q7GNS4 ^@ 32439721 ^@ Plant Physiol|||Plant Physiol. ^@ Epigenetic Activation of Enoyl-CoA Reductase By An Acetyltransferase Complex Triggers Wheat Wax Biosynthesis.|||Epigenetic Activation of Enoyl-CoA Reductase By An Acetyltransferase Complex Triggers Wheat Wax Biosynthesis. ^@ Chang C.|||Kong L.|||Li H.|||Liu J.|||Wang X.|||Xu J.|||Zhang X.|||Zhi P.|||Zhou J.
http://togogenome.org/gene/4081:LOC101252719 ^@ http://purl.uniprot.org/uniprot/A0A3Q7I881 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:TPP3 ^@ http://purl.uniprot.org/uniprot/Q40128 ^@ 25802281|||7647301 ^@ Mol Cell Biol|||Mol. Cell. Biol.|||Plant Mol. Biol. ^@ Nature and regulation of pistil-expressed genes in tomato.|||The Tomato Defensin TPP3 Binds Phosphatidylinositol (4,5)-Bisphosphate via a Conserved Dimeric Cationic Grip Conformation To Mediate Cell Lysis. ^@ Adda C.G.|||Anderson M.A.|||Baxter A.A.|||Bleackley M.R.|||Gasser C.S.|||Hulett M.D.|||Kvansakul M.|||Lay F.T.|||Milligan S.B.|||Phan T.K.|||Poon I.K.|||Richter V.|||Veneer P.K.
http://togogenome.org/gene/4081:eIF-5A1 ^@ http://purl.uniprot.org/uniprot/Q9AXQ6 ^@ 11278418 ^@ J. Biol. Chem. ^@ Isolation and characterization of senescence-induced cDNAs encoding deoxyhypusine synthase and eucaryotic translation initiation factor 5A from tomato. ^@ Lu L.|||Thompson J.E.|||Wang D.|||Wang T.-W.
http://togogenome.org/gene/4081:TAO3 ^@ http://purl.uniprot.org/uniprot/Q9FV23 ^@ 11018259 ^@ Biochim Biophys Acta|||Biochim. Biophys. Acta ^@ Molecular cloning and expression patterns of three putative functional aldehyde oxidase genes and isolation of two aldehyde oxidase pseudogenes in tomato. ^@ Brockmann B.|||Kamiya Y.|||Koshiba T.|||Min X.|||Okada K.
http://togogenome.org/gene/4081:DCL3 ^@ http://purl.uniprot.org/uniprot/X4Y6L7 ^@ 24656338 ^@ Plant Sci|||Plant Sci. ^@ Generation and characterization of a tomato DCL3-silencing mutant. ^@ Arazi T.|||Damodharan S.|||Kravchik M.|||Stav R.
http://togogenome.org/gene/4081:GAME2 ^@ http://purl.uniprot.org/uniprot/E5L3S0 ^@ 22180624 ^@ Plant Cell ^@ GLYCOALKALOID METABOLISM1 Is Required for Steroidal Alkaloid Glycosylation and Prevention of Phytotoxicity in Tomato.|||GLYCOALKALOID METABOLISM1 is required for steroidal alkaloid glycosylation and prevention of phytotoxicity in tomato. ^@ Aharoni A.|||Alkan N.|||Aoki K.|||Beekwilder J.|||Burdman S.|||Iijima Y.|||Itkin M.|||Malitsky S.|||Masini L.|||Meir S.|||Prusky D.|||Rogachev I.|||Rosenberg T.|||de Vos R.
http://togogenome.org/gene/4081:wus ^@ http://purl.uniprot.org/uniprot/Q84VT7 ^@ 12874128 ^@ Development ^@ Microsurgical and laser ablation analysis of interactions between the zones and layers of the tomato shoot apical meristem. ^@ Frenz M.|||Kuhlemeier C.|||Mandel T.|||Reinhardt D.
http://togogenome.org/gene/4081:H2B-2 ^@ http://purl.uniprot.org/uniprot/O65818 ^@ 10344194 ^@ Plant Mol. Biol. ^@ Isolation and molecular characterization of gibberellin-regulated H1 and H2B histone cDNAs in the leaf of the gibberellin-deficient tomato. ^@ Barendse G.W.M.|||Wullems G.J.|||van Esch R.J.|||van den Heuvel K.J.P.T.
http://togogenome.org/gene/4081:LOC101247327 ^@ http://purl.uniprot.org/uniprot/A0A3Q7HES4 ^@ 25612924|||30610166 ^@ BMC Genomics|||Plant Cell ^@ Genome-wide identification and characterization of the bHLH gene family in tomato.|||MYC2 regulates the termination of jasmonate signaling via an autoregulatory negative feedback loop. ^@ Chen Q.|||Deng L.|||Du M.|||Fan H.J.|||Fang M.|||Li C.|||Ling H.Q.|||Liu Y.|||Lu Y.|||Shen J.|||Sun H.|||Wang Q.|||Zhai Q.
http://togogenome.org/gene/4081:DDB1 ^@ http://purl.uniprot.org/uniprot/Q6QNU4 ^@ 14968305|||15178762 ^@ Proc. Natl. Acad. Sci. U.S.A.|||Theor. Appl. Genet. ^@ Manipulation of light signal transduction as a means of modifying fruit nutritional quality in tomato.|||The tomato homolog of the gene encoding UV-damaged DNA binding protein 1 (DDB1) underlined as the gene that causes the high pigment-1 mutant phenotype. ^@ Barry C.|||Bowler C.|||Gilboa N.|||Giovannoni J.|||Lalazar A.|||Levin I.|||Lieberman M.|||Liu Y.|||Roof S.|||Segev O.|||Vrebalov J.|||Ye Z.|||van Tuinen A.
http://togogenome.org/gene/4081:LOC101248435 ^@ http://purl.uniprot.org/uniprot/K4B2I4 ^@ 26248665 ^@ J Exp Bot|||J. Exp. Bot. ^@ L-type lectin receptor kinases in Nicotiana benthamiana and tomato and their role in Phytophthora resistance. ^@ Bouwmeester K.|||Govers F.|||Wang Y.|||Weide R.
http://togogenome.org/gene/4081:TAPG1 ^@ http://purl.uniprot.org/uniprot/O22311|||http://purl.uniprot.org/uniprot/Q40135 ^@ 7647297|||9669329 ^@ Mol Gen Genet|||Mol. Gen. Genet.|||Plant Mol Biol|||Plant Mol. Biol. ^@ Cloning of a tomato polygalacturonase expressed in abscission.|||Genomic organization of six tomato polygalacturonases and 5' upstream sequence identity with tap1 and win2 genes. ^@ Hong S.B.|||Kalaitzis P.|||Koehler S.M.|||Tucker M.L.
http://togogenome.org/gene/4081:SlCKX1 ^@ http://purl.uniprot.org/uniprot/I0IUQ5 ^@ 22865911 ^@ J Exp Bot|||J. Exp. Bot. ^@ Roles and regulation of cytokinins in tomato fruit development. ^@ Fukuda M.|||Honda I.|||Imanishi S.|||Kikuchi K.|||Matsuo S.
http://togogenome.org/gene/4081:ADH3 ^@ http://purl.uniprot.org/uniprot/D2Y3F4 ^@ 23274177 ^@ Biochimie ^@ Structural and functional characterization of a plant S-nitrosoglutathione reductase from Solanum lycopersicum. ^@ Barroso J.B.|||Briozzo P.|||Kopecny D.|||Kubienova L.|||Luhova L.|||Navratil M.|||Petrivalsky M.|||Sebela M.|||Skopalova J.|||Tache R.|||Tylichova M.
http://togogenome.org/gene/4081:ETR4 ^@ http://purl.uniprot.org/uniprot/Q9XET8 ^@ 10318694 ^@ Plant Physiol|||Plant Physiol. ^@ Differential expression of two novel members of the tomato ethylene-receptor family. ^@ Klee H.J.|||Tieman D.M.
http://togogenome.org/gene/4081:ext1 ^@ http://purl.uniprot.org/uniprot/Q8VWM5 ^@ 11891247 ^@ Plant Physiol|||Plant Physiol. ^@ The expression of an extensin-like protein correlates with cellular tip growth in tomato. ^@ Amrhein N.|||Brunner S.|||Bucher M.|||Riesmeier J.W.|||Willmitzer L.|||Zardi G.I.|||Zimmermann P.
http://togogenome.org/gene/4081:ARF14 ^@ http://purl.uniprot.org/uniprot/E3USC7 ^@ 21735233 ^@ Plant Cell Rep. ^@ Identification, isolation and expression analysis of auxin response factor (ARF) genes in Solanum lycopersicum. ^@ Cheng L.|||Kong F.|||Liu S.|||Lu G.|||Peng Z.|||Wang F.|||Wu J.|||Yu X.
http://togogenome.org/gene/4081:LOC101055547 ^@ http://purl.uniprot.org/uniprot/G9HPW2 ^@ 22368074 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ Genome-Wide Identification, Functional Analysis and Expression Profiling of the Aux/IAA Gene Family in Tomato.|||Genome-wide identification, functional analysis and expression profiling of the Aux/IAA gene family in tomato. ^@ Audran-Delalande C.|||Bassa C.|||Bouzayen M.|||Mila I.|||Regad F.|||Zouine M.
http://togogenome.org/gene/4081:LyesC2p017 ^@ http://purl.uniprot.org/uniprot/Q2A7B8 ^@ 16575560|||16830097 ^@ J. Mol. Evol.|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.
http://togogenome.org/gene/4081:TAG1 ^@ http://purl.uniprot.org/uniprot/Q40168 ^@ 7908549 ^@ Plant Cell ^@ Isolation of the tomato AGAMOUS gene TAG1 and analysis of its homeotic role in transgenic plants. ^@ Hareven D.|||Lifschitz E.|||Pneuli L.|||Rounsley S.D.|||Yanofsky M.F.
http://togogenome.org/gene/4081:LeZIP2 ^@ http://purl.uniprot.org/uniprot/Q9SPF7 ^@ 11219584 ^@ Planta ^@ Molecular cloning and characterization of a tomato cDNA encoding a systemically wound-inducible bZIP DNA-binding protein. ^@ Davies E.|||Davies E.'|||Henry-Vian C.|||Stankovic B.|||Vian A.
http://togogenome.org/gene/4081:MAPK6 ^@ http://purl.uniprot.org/uniprot/F8UF76 ^@ 22306326 ^@ Gene ^@ Genome-wide analysis of the mitogen-activated protein kinase gene family in Solanum lycopersicum. ^@ Cheng L.|||Kong F.|||Liu S.|||Lu G.|||Peng Z.|||Wang J.|||Wu J.
http://togogenome.org/gene/4081:LOC101264789 ^@ http://purl.uniprot.org/uniprot/K4BAP0 ^@ 27579028 ^@ Front Plant Sci|||Front. Plant Sci. ^@ Genome-Wide Study of the Tomato SlMLO Gene Family and Its Functional Characterization in Response to the Powdery Mildew Fungus Oidium neolycopersici. ^@ Appiano M.|||Bai Y.|||Bracuto V.|||Pavan S.|||Ricciardi L.|||Visser R.G.|||Wolters A.M.|||Zheng Z.
http://togogenome.org/gene/4081:LOC543597 ^@ http://purl.uniprot.org/uniprot/Q9XFB2 ^@ 11352462 ^@ Plant Mol Biol|||Plant Mol. Biol. ^@ Two iron-regulated cation transporters from tomato complement metal uptake-deficient yeast mutants. ^@ Buckhout T.J.|||Eckhardt U.|||Mas Marques A.
http://togogenome.org/gene/4081:ADH ^@ http://purl.uniprot.org/uniprot/A6N6K9 ^@ 17644147 ^@ Phytochemistry ^@ Tomato phenylacetaldehyde reductases catalyze the last step in the synthesis of the aroma volatile 2-phenylethanol. ^@ Clark D.G.|||Kim J.Y.|||Klee H.J.|||Loucas H.M.|||Tieman D.M.
http://togogenome.org/gene/4081:Sip1 ^@ http://purl.uniprot.org/uniprot/G4XQK5|||http://purl.uniprot.org/uniprot/Q9FPL1 ^@ 12857836|||22573803 ^@ Plant Physiol|||Plant Physiol. ^@ Abscisic acid and gibberellin differentially regulate expression of genes of the SNF1-related kinase complex in tomato seeds.|||The beta-Subunit of the SnRK1 Complex Is Phosphorylated by the Plant Cell Death Suppressor Adi3.|||The beta-subunit of the SnRK1 complex is phosphorylated by the plant cell death suppressor Adi3. ^@ Alvarado V.|||Avila J.|||Bradford K.J.|||Chen S.|||Dahal P.|||Deeter T.A.|||Devarenne T.P.|||Downie A.B.|||Gee O.H.|||Gregory O.G.|||Martin G.B.|||Silva-Sanchez C.|||Su D.|||Xu S.|||Yang H.
http://togogenome.org/gene/4081:SlMMP2 ^@ http://purl.uniprot.org/uniprot/I7KJ40 ^@ 26070456|||27208293 ^@ BMC Plant Biol|||BMC Plant Biol.|||Plant Physiol|||Plant Physiol. ^@ Cell Death Control by Matrix Metalloproteinases.|||Tomato Sl3-MMP, a member of the Matrix metalloproteinase family, is required for disease resistance against Botrytis cinerea and Pseudomonas syringae pv. tomato DC3000. ^@ Brack-Frick U.B.|||Gomez-Barrera J.A.|||Hong Y.|||Huang L.|||Li D.|||Liu S.|||Nicholson T.M.|||Pasule C.|||Pfannstiel J.|||Schaller A.|||Sieferer E.|||Song F.|||Song Q.|||Stintzi A.|||Wang L.|||Zhang H.|||Zimmermann D.
http://togogenome.org/gene/4081:CYP734A7 ^@ http://purl.uniprot.org/uniprot/Q0X087 ^@ 16872648 ^@ Phytochemistry ^@ Tomato cytochrome P450 CYP734A7 functions in brassinosteroid catabolism. ^@ Miyagawa H.|||Mizutani M.|||Nomura T.|||Ohnishi T.|||Ohta D.|||Sakata K.|||Watanabe B.|||Yokota T.
http://togogenome.org/gene/4081:GLK1 ^@ http://purl.uniprot.org/uniprot/I6QQX8 ^@ 22745430|||24510723 ^@ Plant Cell|||Science ^@ Tomato GOLDEN2-LIKE Transcription Factors Reveal Molecular Gradients That Function during Fruit Development and Ripening.|||Tomato GOLDEN2-LIKE transcription factors reveal molecular gradients that function during fruit development and ripening.|||Uniform ripening encodes a Golden 2-like transcription factor regulating tomato fruit chloroplast development. ^@ Aktas H.|||Ashrafi H.|||Barry C.S.|||Bennett A.B.|||Cheng K.L.|||Chetelat R.|||Fei Z.|||Fernandez-Munoz R.|||Figueroa-Balderas R.|||Gapper N.E.|||Giovannoni J.J.|||Granell A.|||Hill T.|||Liu Y.|||Lopez-Baltazar J.|||Nguyen C.V.|||Pons C.|||Powell A.L.|||Van Deynze A.|||Vicente A.|||Vrebalov J.T.|||Zheng Y.|||Zhong S.
http://togogenome.org/gene/4081:SAR2 ^@ http://purl.uniprot.org/uniprot/P52884 ^@ 8123794 ^@ Plant Mol. Biol. ^@ Cloning and characterization of a tomato GTPase-like gene related to yeast and Arabidopsis genes involved in vesicular transport. ^@ Davies C.
http://togogenome.org/gene/4081:LOC101263309 ^@ http://purl.uniprot.org/uniprot/Q6LB28 ^@ 21900168 ^@ J Virol|||J. Virol. ^@ Histone H3 interacts and colocalizes with the nuclear shuttle protein and the movement protein of a geminivirus.|||Histone h3 interacts and colocalizes with the nuclear shuttle protein and the movement protein of a geminivirus. ^@ Gilbertson R.L.|||Lucas W.J.|||Park M.R.|||Rojas M.R.|||Seo Y.S.|||Zhou Y.
http://togogenome.org/gene/4081:opr3 ^@ http://purl.uniprot.org/uniprot/Q9FEW9 ^@ 12445129|||16983071|||19660473 ^@ J. Mol. Biol.|||Plant J.|||Proc. Natl. Acad. Sci. U.S.A. ^@ Characterization and cDNA-microarray expression analysis of 12-oxophytodienoate reductases reveals differential roles for octadecanoid biosynthesis in the local versus the systemic wound response.|||Crystal structure of 12-oxophytodienoate reductase 3 from tomato: self-inhibition by dimerization.|||Structural basis of substrate specificity of plant 12-oxophytodienoate reductases. ^@ Amrhein N.|||Breithaupt C.|||Clausen T.|||Frick U.B.|||Howe G.A.|||Huber R.|||Kurzbauer R.|||Lilie H.|||Macheroux P.|||Schaller A.|||Schaller F.|||Stintzi A.|||Strassner J.|||Weiler E.W.
http://togogenome.org/gene/4081:MKS1d ^@ http://purl.uniprot.org/uniprot/E0YCS6 ^@ 20605911 ^@ Plant Physiol|||Plant Physiol. ^@ Enzymatic functions of wild tomato methylketone synthases 1 and 2. ^@ Auldridge M.E.|||Ben-Israel I.|||Bhuiyan N.|||Fridman E.|||Guo Y.|||Iijima Y.|||Nguyen T.T.|||Noel J.P.|||Pichersky E.|||Schauvinhold I.|||Yu G.
http://togogenome.org/gene/4081:ACO4 ^@ http://purl.uniprot.org/uniprot/P24157 ^@ 2065651|||8624515 ^@ EMBO J.|||Plant J. ^@ Analysis and cloning of the ethylene-forming enzyme from tomato by functional expression of its mRNA in Xenopus laevis oocytes.|||Differential expression of the 1-aminocyclopropane-1-carboxylate oxidase gene family of tomato. ^@ Barry C.S.|||Blume B.|||Boller T.|||Bouzayen M.|||Cooper W.|||Grierson D.|||Hamilton A.J.|||Reinhardt D.|||Spanu P.
http://togogenome.org/gene/4081:PGH1 ^@ http://purl.uniprot.org/uniprot/P26300 ^@ 1841726 ^@ Plant Cell ^@ Plant enolase: gene structure, expression, and evolution. ^@ Der Straeten D.|||Goodman H.M.|||Montagu M.|||Rodrigues-Pousada R.A.|||van Montagu M.|||van der Straeten D.
http://togogenome.org/gene/4081:LyesC2p058 ^@ http://purl.uniprot.org/uniprot/A0A0C5C9U0|||http://purl.uniprot.org/uniprot/Q2MI89 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LOC778262 ^@ http://purl.uniprot.org/uniprot/Q1HTV5 ^@ 16682641 ^@ Proc Natl Acad Sci U S A|||Proc. Natl. Acad. Sci. U.S.A. ^@ Ripening in the tomato Green-ripe mutant is inhibited by ectopic expression of a protein that disrupts ethylene signaling. ^@ Barry C.S.|||Giovannoni J.J.
http://togogenome.org/gene/4081:MAPK14 ^@ http://purl.uniprot.org/uniprot/F8UFC4 ^@ 22306326 ^@ Gene ^@ Genome-wide analysis of the mitogen-activated protein kinase gene family in Solanum lycopersicum. ^@ Cheng L.|||Kong F.|||Liu S.|||Lu G.|||Peng Z.|||Wang J.|||Wu J.
http://togogenome.org/gene/4081:SlFKBP12 ^@ http://purl.uniprot.org/uniprot/Q2VY16 ^@ 16623906 ^@ Plant J|||Plant J. ^@ The CCAAT binding factor can mediate interactions between CONSTANS-like proteins and DNA. ^@ Ben-Naim O.|||Coupland G.|||Eshed R.|||Lifschitz E.|||Parnis A.|||Samach A.|||Shalit A.|||Teper-Bamnolker P.
http://togogenome.org/gene/4081:ht1 ^@ http://purl.uniprot.org/uniprot/D0EXD9 ^@ 20833733 ^@ Mol Plant|||Mol. Plant ^@ Functional characterization and RNAi-mediated suppression reveals roles for hexose transporters in sugar accumulation by tomato fruit. ^@ Cahyanegara R.|||Dibley S.|||Martin A.|||McCurdy D.W.|||Patrick J.W.
http://togogenome.org/gene/4081:LOC101251254 ^@ http://purl.uniprot.org/uniprot/K4B6C9 ^@ 24142382|||24884371 ^@ BMC Genomics|||Plant Mol. Biol. ^@ Expression of Terpenoids 1, a glandular trichome-specific transcription factor from tomato that activates the terpene synthase 5 promoter.|||RNA sequencing on Solanum lycopersicum trichomes identifies transcription factors that activate terpene synthase promoters. ^@ Haring M.A.|||Schuurink R.C.|||Spyropoulou E.A.
http://togogenome.org/gene/4081:RPL3 ^@ http://purl.uniprot.org/uniprot/Q6SKP4 ^@ 17134394|||35643637 ^@ Plant Biotechnol J|||Plant Biotechnol. J.|||Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome.|||Toxin-dependent utilization of engineered ribosomal protein L3 limits trichothecene resistance in transgenic plants. ^@ Adam G.|||Amunts A.|||Cottilli P.|||Glossl J.|||Itoh Y.|||Lemmens M.|||Lison P.|||Lucyshyn D.|||Mitterbauer R.|||Nobe Y.|||Petrov A.S.|||Poppenberger B.|||Raditschnig A.|||Taoka M.
http://togogenome.org/gene/4081:LyesC2p070 ^@ http://purl.uniprot.org/uniprot/A0A0C5CEC1|||http://purl.uniprot.org/uniprot/Q2MIA1 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:GA2ox1 ^@ http://purl.uniprot.org/uniprot/A4GVL5 ^@ 17660355 ^@ Plant Physiol|||Plant Physiol. ^@ Gibberellin regulation of fruit set and growth in tomato. ^@ Fos M.|||Garcia-Martinez J.L.|||Ruiz-Rivero O.|||Sanjuan R.|||Serrani J.C.
http://togogenome.org/gene/4081:LOC101259462 ^@ http://purl.uniprot.org/uniprot/K4CND1 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:LOC101252765 ^@ http://purl.uniprot.org/uniprot/K4BLN8 ^@ 28389586 ^@ Plant Cell ^@ Coordination of Meristem Doming and the Floral Transition by Late Termination, a Kelch Repeat Protein. ^@ Eshed Y.|||Friedlander G.|||Gilad S.|||Gilboa N.S.|||Segal Gilboa N.|||Tal L.|||Unger T.
http://togogenome.org/gene/4081:LOC101258429 ^@ http://purl.uniprot.org/uniprot/Q0PY39 ^@ 16832354 ^@ Nat Genet|||Nat. Genet. ^@ A naturally occurring epigenetic mutation in a gene encoding an SBP-box transcription factor inhibits tomato fruit ripening. ^@ Giovannoni J.J.|||Hong Y.|||King G.J.|||Manning K.|||Poole M.|||Seymour G.B.|||Thompson A.J.|||Tor M.
http://togogenome.org/gene/4081:Aqp2 ^@ http://purl.uniprot.org/uniprot/K4AZL0 ^@ 24260152 ^@ PLoS ONE|||PLoS One ^@ Genome-wide identification and expression analysis of aquaporins in tomato. ^@ Akiyama M.|||Aoki K.|||Mori C.|||Reuscher S.|||Shibata D.|||Shiratake K.
http://togogenome.org/gene/4081:LOC101251804 ^@ http://purl.uniprot.org/uniprot/A0A3Q7E9D6 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:SD1 ^@ http://purl.uniprot.org/uniprot/A9QPL5 ^@ 18461960 ^@ J Agric Food Chem|||J. Agric. Food Chem. ^@ Ripening-specific stigmasterol increase in tomato fruit is associated with increased sterol C-22 desaturase (CYP710A11) gene expression. ^@ Gapper N.E.|||Whitaker B.D.
http://togogenome.org/gene/4081:LOC101251497 ^@ http://purl.uniprot.org/uniprot/K4CND1 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:OPR1 ^@ http://purl.uniprot.org/uniprot/Q9XG54 ^@ 10574986|||11377202|||12445129|||19660473 ^@ J. Biol. Chem.|||J. Mol. Biol.|||Plant J.|||Structure ^@ A homolog of old yellow enzyme in tomato: spectral properties and substrate specificity of the recombinant protein.|||Characterization and cDNA-microarray expression analysis of 12-oxophytodienoate reductases reveals differential roles for octadecanoid biosynthesis in the local versus the systemic wound response.|||Structural basis of substrate specificity of plant 12-oxophytodienoate reductases.|||X-ray structure of 12-oxophytodienoate reductase 1 provides structural insight into substrate binding and specificity within the family of OYE. ^@ Amrhein N.|||Breithaupt C.|||Breitinger U.|||Clausen T.|||Frick U.B.|||Fuerholz A.|||Howe G.A.|||Huber R.|||Kurzbauer R.|||Macheroux P.|||Schaller A.|||Schaller F.|||Stintzi A.|||Strassner J.|||Weiler E.W.
http://togogenome.org/gene/4081:LOC101251805 ^@ http://purl.uniprot.org/uniprot/K4CNL4 ^@ 26070456 ^@ BMC Plant Biol|||BMC Plant Biol. ^@ Tomato Sl3-MMP, a member of the Matrix metalloproteinase family, is required for disease resistance against Botrytis cinerea and Pseudomonas syringae pv. tomato DC3000. ^@ Hong Y.|||Huang L.|||Li D.|||Liu S.|||Song F.|||Song Q.|||Wang L.|||Zhang H.
http://togogenome.org/gene/4081:ACO3 ^@ http://purl.uniprot.org/uniprot/P10967 ^@ 3208738 ^@ EMBO J. ^@ Interaction of a DNA binding factor with the 5'-flanking region of an ethylene-responsive fruit ripening gene from tomato. ^@ Deikman J.|||Fischer R.L.
http://togogenome.org/gene/4081:LOC101252833 ^@ http://purl.uniprot.org/uniprot/B1N660 ^@ 18339939 ^@ Science ^@ A retrotransposon-mediated gene duplication underlies morphological variation of tomato fruit. ^@ Jiang N.|||Schaffner E.|||Stockinger E.J.|||Xiao H.|||van der Knaap E.
http://togogenome.org/gene/4081:TBG3 ^@ http://purl.uniprot.org/uniprot/Q9ZP11 ^@ 10889266 ^@ Plant Physiol|||Plant Physiol. ^@ A family of at least seven beta-galactosidase genes is expressed during tomato fruit development. ^@ Gross K.C.|||Smith D.L.
http://togogenome.org/gene/4081:SGR1 ^@ http://purl.uniprot.org/uniprot/Q4JFW8 ^@ 18359841|||23406468 ^@ New Phytol.|||Plant Physiol. ^@ A STAY-GREEN protein SlSGR1 regulates lycopene and beta-carotene accumulation by interacting directly with SlPSY1 during ripening processes in tomato.|||Amino acid substitutions in homologs of the STAY-GREEN protein are responsible for the green-flesh and chlorophyll retainer mutations of tomato and pepper. ^@ Barry C.S.|||Besuden A.|||Chung M.Y.|||Giovannoni J.|||Giovannoni J.J.|||Li H.|||Li J.|||Luo Z.|||Mc Quinn R.P.|||Ouyang B.|||Wang T.|||Yang C.|||Ye Z.|||Zhang J.
http://togogenome.org/gene/4081:CPA ^@ http://purl.uniprot.org/uniprot/Q9XGI9 ^@ 12435743 ^@ J. Biol. Chem. ^@ Plant C-N hydrolases and the identification of a plant N-carbamoylputrescine amidohydrolase involved in polyamine biosynthesis. ^@ Janowitz T.|||Kneifel H.|||Piotrowski M.
http://togogenome.org/gene/4081:ASCL ^@ http://purl.uniprot.org/uniprot/Q8W4Y5 ^@ 12445127 ^@ Plant J. ^@ The plant disease resistance gene Asc-1 prevents disruption of sphingolipid metabolism during AAL-toxin-induced programmed cell death. ^@ Hille J.|||Markham J.E.|||Spassieva S.D.
http://togogenome.org/gene/4081:LOC104649435 ^@ http://purl.uniprot.org/uniprot/K4AZV3 ^@ 29186488 ^@ J Exp Bot|||J. Exp. Bot. ^@ A putative R3 MYB repressor is the candidate gene underlying atroviolacium, a locus for anthocyanin pigmentation in tomato fruit. ^@ Cao X.|||Du Y.|||Gao J.|||Guo Y.|||Huang Z.|||Liu X.|||Qiu Z.|||Van Giang T.|||Wang G.|||Wang J.|||Wang X.|||Wang X.'
http://togogenome.org/gene/4081:LOC101252072 ^@ http://purl.uniprot.org/uniprot/A0A0M3L7B4 ^@ 25710821 ^@ Mol Plant Microbe Interact|||Mol. Plant Microbe Interact. ^@ Tomato SOBIR1/EVR Homologs Are Involved in Elicitin Perception and Plant Defense Against the Oomycete Pathogen Phytophthora parasitica. ^@ Huang C.T.|||Liou R.F.|||Peng K.C.|||Wang C.W.|||Wu C.H.
http://togogenome.org/gene/4081:LyesC2p048 ^@ http://purl.uniprot.org/uniprot/A0A0C5C9U5|||http://purl.uniprot.org/uniprot/Q2MI79 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:sbt4e ^@ http://purl.uniprot.org/uniprot/Q9ZS42 ^@ 10350089 ^@ Plant Mol. Biol. ^@ Characterization of the subtilase gene family in tomato (Lycopersicon esculentum Mill.). ^@ Amrhein N.|||Meichtry J.|||Schaller A.
http://togogenome.org/gene/4081:LOC101256619 ^@ http://purl.uniprot.org/uniprot/K4CR01 ^@ 27909045 ^@ Plant Physiol|||Plant Physiol. ^@ A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity. ^@ Chen X.|||Connor R.A.|||Gough J.|||Martin G.B.|||Mural R.V.|||Oates M.E.|||Zeng L.|||Zhou B.
http://togogenome.org/gene/4081:SIP2-1 ^@ http://purl.uniprot.org/uniprot/V5YNY6 ^@ 24260152 ^@ PLoS ONE|||PLoS One ^@ Genome-wide identification and expression analysis of aquaporins in tomato. ^@ Akiyama M.|||Aoki K.|||Mori C.|||Reuscher S.|||Shibata D.|||Shiratake K.
http://togogenome.org/gene/4081:SFP11 ^@ http://purl.uniprot.org/uniprot/A0A060PVS9 ^@ 24833026 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ The sugar transporter inventory of tomato: genome-wide identification and expression analysis. ^@ Akiyama M.|||Aoki K.|||Koh A.|||Makino H.|||Reuscher S.|||Shibata D.|||Shiratake K.|||Yasuda T.
http://togogenome.org/gene/4081:SlBRC1a-like ^@ http://purl.uniprot.org/uniprot/G3BGV8 ^@ 24903607 ^@ BMC Plant Biol|||BMC Plant Biol. ^@ Identification, cloning and characterization of the tomato TCP transcription factor family. ^@ Angenent G.C.|||Bovy A.G.|||Busscher M.|||Busscher-Lange J.|||Karlova R.|||Lammers M.|||Parapunova V.|||de Maagd R.A.
http://togogenome.org/gene/4081:LyesC2p049 ^@ http://purl.uniprot.org/uniprot/A0A0C5CUT2|||http://purl.uniprot.org/uniprot/Q2MI80 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:profilin ^@ http://purl.uniprot.org/uniprot/Q93YG7 ^@ 12915767 ^@ Int. Arch. Allergy Immunol. ^@ Cloning and molecular and immunological characterization of two new food allergens, Cap a 2 and Lyc e 1, profilins from bell pepper (Capsicum annuum) and Tomato (Lycopersicon esculentum). ^@ Ballmer-Weber B.|||Breiteneder H.|||Ferreira F.|||Focke M.|||Fuchs H.|||Hoffman-Sommergruber K.|||Scheiner O.|||Susani M.|||Thalhamer J.|||Willerroider M.|||Wuethrich B.
http://togogenome.org/gene/4081:LOC104648543 ^@ http://purl.uniprot.org/uniprot/K4CHN9 ^@ 26248665 ^@ J Exp Bot|||J. Exp. Bot. ^@ L-type lectin receptor kinases in Nicotiana benthamiana and tomato and their role in Phytophthora resistance. ^@ Bouwmeester K.|||Govers F.|||Wang Y.|||Weide R.
http://togogenome.org/gene/4081:LOC101265499 ^@ http://purl.uniprot.org/uniprot/K4BAM5 ^@ 27909045 ^@ Plant Physiol|||Plant Physiol. ^@ A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity. ^@ Chen X.|||Connor R.A.|||Gough J.|||Martin G.B.|||Mural R.V.|||Oates M.E.|||Zeng L.|||Zhou B.
http://togogenome.org/gene/4081:TPS7 ^@ http://purl.uniprot.org/uniprot/G1JUH4 ^@ 21813655 ^@ Plant Physiol. ^@ The tomato terpene synthase gene family. ^@ Akhtar T.A.|||Bleeker P.M.|||Bonini M.E.|||Falara V.|||Last R.L.|||Matsuba Y.|||Nguyen T.T.|||Nguyen T.T.H.|||Pichersky E.|||Schauvinhold I.|||Schilmiller A.L.|||Schuurink R.C.|||Spyropoulou E.A.
http://togogenome.org/gene/4081:LOC101055555 ^@ http://purl.uniprot.org/uniprot/G9HPX5 ^@ 22368074 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ Genome-Wide Identification, Functional Analysis and Expression Profiling of the Aux/IAA Gene Family in Tomato.|||Genome-wide identification, functional analysis and expression profiling of the Aux/IAA gene family in tomato. ^@ Audran-Delalande C.|||Bassa C.|||Bouzayen M.|||Mila I.|||Regad F.|||Zouine M.
http://togogenome.org/gene/4081:vsf-1 ^@ http://purl.uniprot.org/uniprot/O81998|||http://purl.uniprot.org/uniprot/Q43530 ^@ 8919907|||9700070 ^@ Plant J|||Plant J.|||Plant Mol Biol|||Plant Mol. Biol. ^@ In vitro binding of the tomato bZIP transcriptional activator VSF-1 to a regulatory element that controls xylem-specific gene expression.|||Specific interaction of the tomato bZIP transcription factor VSF-1 with a non-palindromic DNA sequence that controls vascular gene expression. ^@ Amrhein N.|||Heierli D.|||Keller B.|||Ringli C.|||Torres-Schumann S.
http://togogenome.org/gene/4081:LyesC2p020 ^@ http://purl.uniprot.org/uniprot/A0A0U1ZHJ2|||http://purl.uniprot.org/uniprot/Q32516 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LyesC2p089 ^@ http://purl.uniprot.org/uniprot/A0A0C5CHA2|||http://purl.uniprot.org/uniprot/Q2MIC0 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LOC101248690 ^@ http://purl.uniprot.org/uniprot/K4CBU4 ^@ 29807583 ^@ Plant Sci|||Plant Sci. ^@ Overexpression of an EIN3-binding F-box protein2-like gene caused elongated fruit shape and delayed fruit development and ripening in tomato. ^@ Cheng W.|||Guo X.|||Tu Y.|||Wang Y.|||Yang Y.|||Zhang Y.
http://togogenome.org/gene/4081:LOC101243965 ^@ http://purl.uniprot.org/uniprot/K4DDJ2 ^@ 24260152 ^@ PLoS ONE|||PLoS One ^@ Genome-wide identification and expression analysis of aquaporins in tomato. ^@ Akiyama M.|||Aoki K.|||Mori C.|||Reuscher S.|||Shibata D.|||Shiratake K.
http://togogenome.org/gene/4081:IAA5 ^@ http://purl.uniprot.org/uniprot/G9HPV9 ^@ 22368074 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ Genome-Wide Identification, Functional Analysis and Expression Profiling of the Aux/IAA Gene Family in Tomato.|||Genome-wide identification, functional analysis and expression profiling of the Aux/IAA gene family in tomato. ^@ Audran-Delalande C.|||Bassa C.|||Bouzayen M.|||Mila I.|||Regad F.|||Zouine M.
http://togogenome.org/gene/4081:MT4 ^@ http://purl.uniprot.org/uniprot/Q43513 ^@ 9687073 ^@ Plant Mol. Biol. ^@ Structure, expression and chromosomal localisation of the metallothionein-like gene family of tomato. ^@ Baumlein H.|||Ganal M.|||Giritch A.|||Stephan U.W.
http://togogenome.org/gene/4081:ldh1 ^@ http://purl.uniprot.org/uniprot/Q96569 ^@ 9426593|||9426613 ^@ Plant Mol Biol|||Plant Mol. Biol. ^@ Differential expression of two tomato lactate dehydrogenase genes in response to oxygen deficit.|||Two ldh genes from tomato and their expression in different organs, during fruit ripening and in response to stress. ^@ Germain V.|||Raymond P.|||Ricard B.
http://togogenome.org/gene/4081:LOC101055556 ^@ http://purl.uniprot.org/uniprot/G9HPX6 ^@ 22368074 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ Genome-Wide Identification, Functional Analysis and Expression Profiling of the Aux/IAA Gene Family in Tomato.|||Genome-wide identification, functional analysis and expression profiling of the Aux/IAA gene family in tomato. ^@ Audran-Delalande C.|||Bassa C.|||Bouzayen M.|||Mila I.|||Regad F.|||Zouine M.
http://togogenome.org/gene/4081:SAP8 ^@ http://purl.uniprot.org/uniprot/C4NAK7 ^@ 19424724 ^@ Mol Genet Genomics|||Mol. Genet. Genomics ^@ Characterization and phylogenetic analysis of environmental stress-responsive SAP gene family encoding A20/AN1 zinc finger proteins in tomato. ^@ Sharma A.K.|||Sharma M.K.|||Solanke A.U.|||Tyagi A.K.
http://togogenome.org/gene/4081:LOC101255657 ^@ http://purl.uniprot.org/uniprot/A0A6G8RRK3 ^@ 32167545 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ A Group of O-Acetyltransferases Catalyze Xyloglucan Backbone Acetylation and Can Alter Xyloglucan Xylosylation Pattern and Plant Growth When Expressed in Arabidopsis.|||A group of O-acetyltransferases catalyze xyloglucan backbone acetylation and can alter xyloglucan xylosylation pattern and plant growth when expressed in Arabidopsis. ^@ Cui D.|||Phillips D.R.|||Richardson E.A.|||Ye Z.H.|||Zhong R.
http://togogenome.org/gene/4081:S ^@ http://purl.uniprot.org/uniprot/B6E0Y5 ^@ 19018664 ^@ PLoS Biol|||PLoS Biol. ^@ The making of a compound inflorescence in tomato and related nightshades. ^@ Abu-Abied M.|||Alvarez J.P.|||Cohen O.|||Eshed Y.|||Lippman Z.B.|||Paran I.|||Pekker I.|||Zamir D.
http://togogenome.org/gene/4081:IAA7 ^@ http://purl.uniprot.org/uniprot/G9HPV6 ^@ 22368074 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ Genome-Wide Identification, Functional Analysis and Expression Profiling of the Aux/IAA Gene Family in Tomato.|||Genome-wide identification, functional analysis and expression profiling of the Aux/IAA gene family in tomato. ^@ Audran-Delalande C.|||Bassa C.|||Bouzayen M.|||Mila I.|||Regad F.|||Zouine M.
http://togogenome.org/gene/4081:ACS2 ^@ http://purl.uniprot.org/uniprot/P18485 ^@ 10557240|||11375393|||11431475|||1762159|||2191304|||9575209 ^@ J. Biol. Chem.|||J. Mol. Biol.|||Plant Physiol.|||Proc. Natl. Acad. Sci. U.S.A. ^@ 1-aminocyclopropane-1-carboxylate synthase in tomato is encoded by a multigene family whose transcription is induced during fruit and floral senescence.|||Cloning and sequence of two different cDNAs encoding 1-aminocyclopropane-1-carboxylate synthase in tomato.|||Complementation analysis of mutants of 1-aminocyclopropane-1-carboxylate synthase reveals the enzyme is a dimer with shared active sites.|||Crystal structures of 1-aminocyclopropane-1-carboxylate (ACC) synthase in complex with aminoethoxyvinylglycine and pyridoxal-5'-phosphate provide new insight into catalytic mechanisms.|||Phosphorylation of tomato 1-aminocyclopropane-1-carboxylic acid synthase, LE-ACS2, at the C-terminal region.|||The multiple roles of conserved arginine 286 of 1-aminocyclopropane-1-carboxylate synthase. Coenzyme binding, substrate binding, and beyond. ^@ Callahan B.|||Campbell A.D.|||Chen Y.|||Goodman H.M.|||Huai Q.|||Ke H.|||Keller J.A.|||Li N.|||Mori H.|||Nagy B.P.|||Oeller P.W.|||Peter G.F.|||Rottmann W.H.|||Shen N.F.|||Sui S.F.|||Tarun A.S.|||Tatsuki M.|||Taylor L.P.|||Theologis A.|||Wang H.W.|||Xia Y.|||Xu P.|||Yang S.F.|||Zhou H.|||Zhu K.|||van Montagu M.|||van Wiemeersch L.|||van der Straeten D.
http://togogenome.org/gene/4081:LOC778264 ^@ http://purl.uniprot.org/uniprot/Q1HTV4 ^@ 16682641 ^@ Proc Natl Acad Sci U S A|||Proc. Natl. Acad. Sci. U.S.A. ^@ Ripening in the tomato Green-ripe mutant is inhibited by ectopic expression of a protein that disrupts ethylene signaling. ^@ Barry C.S.|||Giovannoni J.J.
http://togogenome.org/gene/4081:LyesC2p007 ^@ http://purl.uniprot.org/uniprot/A0A0C5CUU8|||http://purl.uniprot.org/uniprot/Q2MI54 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LOC101258928 ^@ http://purl.uniprot.org/uniprot/A0A3Q7JC00 ^@ 30610166 ^@ Plant Cell ^@ MYC2 regulates the termination of jasmonate signaling via an autoregulatory negative feedback loop. ^@ Chen Q.|||Deng L.|||Du M.|||Fang M.|||Li C.|||Liu Y.|||Lu Y.|||Shen J.|||Wang Q.|||Zhai Q.
http://togogenome.org/gene/4081:LeCCD1B ^@ http://purl.uniprot.org/uniprot/Q6E4P4 ^@ 15584954 ^@ Plant J|||Plant J. ^@ The tomato carotenoid cleavage dioxygenase 1 genes contribute to the formation of the flavor volatiles beta-ionone, pseudoionone, and geranylacetone. ^@ Auldridge M.|||Klee H.J.|||Schwartz S.H.|||Simkin A.J.|||Taylor M.G.
http://togogenome.org/gene/4081:LOC544041 ^@ http://purl.uniprot.org/uniprot/O04680 ^@ 9214637 ^@ EMBO J. ^@ The Pto kinase conferring resistance to tomato bacterial speck disease interacts with proteins that bind a cis-element of pathogenesis-related genes. ^@ Martin G.B.|||Tang X.|||Zhou J.-M.
http://togogenome.org/gene/4081:LeCCD1A ^@ http://purl.uniprot.org/uniprot/Q6E4P5 ^@ 15584954 ^@ Plant J|||Plant J. ^@ The tomato carotenoid cleavage dioxygenase 1 genes contribute to the formation of the flavor volatiles beta-ionone, pseudoionone, and geranylacetone. ^@ Auldridge M.|||Klee H.J.|||Schwartz S.H.|||Simkin A.J.|||Taylor M.G.
http://togogenome.org/gene/4081:MKS1a ^@ http://purl.uniprot.org/uniprot/E0YCS4 ^@ 20605911 ^@ Plant Physiol|||Plant Physiol. ^@ Enzymatic functions of wild tomato methylketone synthases 1 and 2. ^@ Auldridge M.E.|||Ben-Israel I.|||Bhuiyan N.|||Fridman E.|||Guo Y.|||Iijima Y.|||Nguyen T.T.|||Noel J.P.|||Pichersky E.|||Schauvinhold I.|||Yu G.
http://togogenome.org/gene/4081:LOC101055507 ^@ http://purl.uniprot.org/uniprot/K4BEQ5 ^@ 24260152 ^@ PLoS ONE|||PLoS One ^@ Genome-wide identification and expression analysis of aquaporins in tomato. ^@ Akiyama M.|||Aoki K.|||Mori C.|||Reuscher S.|||Shibata D.|||Shiratake K.
http://togogenome.org/gene/4081:RSI-1 ^@ http://purl.uniprot.org/uniprot/P47926 ^@ 8177211 ^@ Mol. Gen. Genet. ^@ A molecular marker for lateral root initiation: the RSI-1 gene of tomato (Lycopersicon esculentum Mill) is activated in early lateral root primordia. ^@ Scheuring C.F.|||Taylor B.H.
http://togogenome.org/gene/4081:LyesC2p039 ^@ http://purl.uniprot.org/uniprot/Q2MI70 ^@ 16575560|||16830097 ^@ J. Mol. Evol.|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.
http://togogenome.org/gene/4081:TGAS118 ^@ http://purl.uniprot.org/uniprot/B1N678 ^@ 18339939 ^@ Science ^@ A retrotransposon-mediated gene duplication underlies morphological variation of tomato fruit. ^@ Jiang N.|||Schaffner E.|||Stockinger E.J.|||Xiao H.|||van der Knaap E.
http://togogenome.org/gene/4081:ProT1 ^@ http://purl.uniprot.org/uniprot/Q9XE48 ^@ 10072398 ^@ Plant Cell ^@ LeProT1, a transporter for proline, glycine betaine, and gamma-amino butyric acid in tomato pollen. ^@ Breitkreuz K.E.|||Frommer W.B.|||Grallath S.|||Rentsch D.|||Schwacke R.|||Stransky E.|||Stransky H.
http://togogenome.org/gene/4081:AO1 ^@ http://purl.uniprot.org/uniprot/Q9FV25 ^@ 11018259 ^@ Biochim Biophys Acta|||Biochim. Biophys. Acta ^@ Molecular cloning and expression patterns of three putative functional aldehyde oxidase genes and isolation of two aldehyde oxidase pseudogenes in tomato. ^@ Brockmann B.|||Kamiya Y.|||Koshiba T.|||Min X.|||Okada K.
http://togogenome.org/gene/4081:P18 ^@ http://purl.uniprot.org/uniprot/P32518 ^@ 1321683 ^@ Plant Cell ^@ A meristem-related gene from tomato encodes a dUTPase: analysis of expression in vegetative and floral meristems. ^@ Hareven D.|||Lifschitz E.|||Pri-Hadash A.
http://togogenome.org/gene/4081:tft8 ^@ http://purl.uniprot.org/uniprot/P93213 ^@ 10198082 ^@ Plant Physiol. ^@ Fusicoccin, 14-3-3 proteins, and defense responses in tomato plants. ^@ Bowles D.J.|||Roberts M.R.
http://togogenome.org/gene/4081:LOC101055553 ^@ http://purl.uniprot.org/uniprot/G9HPX2 ^@ 22368074 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ Genome-Wide Identification, Functional Analysis and Expression Profiling of the Aux/IAA Gene Family in Tomato.|||Genome-wide identification, functional analysis and expression profiling of the Aux/IAA gene family in tomato. ^@ Audran-Delalande C.|||Bassa C.|||Bouzayen M.|||Mila I.|||Regad F.|||Zouine M.
http://togogenome.org/gene/4081:ACO1 ^@ http://purl.uniprot.org/uniprot/E3VWN6|||http://purl.uniprot.org/uniprot/P05116 ^@ 1868215|||23076530|||3029690 ^@ Mol Biol Rep|||Mol. Biol. Rep.|||Nucleic Acids Res.|||Plant Mol. Biol. ^@ Cloning, identification and expression analysis of ACC oxidase gene involved in ethylene production pathway.|||Structure and expression of an ethylene-related mRNA from tomato.|||eth1, a gene involved in ethylene synthesis in tomato. ^@ Bird C.R.|||Garoosi G.|||Grierson D.|||Haddad R.|||Hamilton A.J.|||Holdsworth M.J.|||Hosseini R.|||Jafari Z.|||Koeck M.|||Ray J.|||Schuch W.
http://togogenome.org/gene/4081:ARF5 ^@ http://purl.uniprot.org/uniprot/D9IVB5 ^@ 21735233 ^@ Plant Cell Rep. ^@ Identification, isolation and expression analysis of auxin response factor (ARF) genes in Solanum lycopersicum. ^@ Cheng L.|||Kong F.|||Liu S.|||Lu G.|||Peng Z.|||Wang F.|||Wu J.|||Yu X.
http://togogenome.org/gene/4081:TFT7 ^@ http://purl.uniprot.org/uniprot/P93212 ^@ 10198082|||11752381 ^@ Plant Cell|||Plant Physiol. ^@ Fusicoccin, 14-3-3 proteins, and defense responses in tomato plants.|||Tomato SP-interacting proteins define a conserved signaling system that regulates shoot architecture and flowering. ^@ Adir N.|||Ben-Naim O.|||Bowles D.J.|||Gutfinger T.|||Hareven D.|||Lifschitz E.|||Pnueli L.|||Roberts M.R.|||Ron N.
http://togogenome.org/gene/4081:LOC101257063 ^@ http://purl.uniprot.org/uniprot/K4ATQ2 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:LOC101243704 ^@ http://purl.uniprot.org/uniprot/K4BVG0 ^@ 27909045 ^@ Plant Physiol|||Plant Physiol. ^@ A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity. ^@ Chen X.|||Connor R.A.|||Gough J.|||Martin G.B.|||Mural R.V.|||Oates M.E.|||Zeng L.|||Zhou B.
http://togogenome.org/gene/4081:GA2ox4 ^@ http://purl.uniprot.org/uniprot/A4GVL8 ^@ 17660355 ^@ Plant Physiol|||Plant Physiol. ^@ Gibberellin regulation of fruit set and growth in tomato. ^@ Fos M.|||Garcia-Martinez J.L.|||Ruiz-Rivero O.|||Sanjuan R.|||Serrani J.C.
http://togogenome.org/gene/4081:LOC101264708 ^@ http://purl.uniprot.org/uniprot/K4DFV3 ^@ 24260152 ^@ PLoS ONE|||PLoS One ^@ Genome-wide identification and expression analysis of aquaporins in tomato. ^@ Akiyama M.|||Aoki K.|||Mori C.|||Reuscher S.|||Shibata D.|||Shiratake K.
http://togogenome.org/gene/4081:LOC101245205 ^@ http://purl.uniprot.org/uniprot/A0A3Q7EMX2 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:p69d ^@ http://purl.uniprot.org/uniprot/O65836 ^@ 10350089 ^@ Plant Mol. Biol. ^@ Characterization of the subtilase gene family in tomato (Lycopersicon esculentum Mill.). ^@ Amrhein N.|||Meichtry J.|||Schaller A.
http://togogenome.org/gene/4081:CBL10 ^@ http://purl.uniprot.org/uniprot/G4XMX1 ^@ 23903322 ^@ Plant Cell ^@ The tomato calcium sensor Cbl10 and its interacting protein kinase Cipk6 define a signaling pathway in plant immunity.|||The tomato calcium sensor cbl10 and its interacting protein kinase cipk6 define a signaling pathway in plant immunity. ^@ Chakravarthy S.|||Del Pozo O.|||Gutierrez-Beltran E.|||Martin G.B.|||Pareja-Jaime Y.|||de la Torre F.|||del Pozo O.
http://togogenome.org/gene/4081:LyesC2p005 ^@ http://purl.uniprot.org/uniprot/Q2MI39 ^@ 16575560|||16830097 ^@ J. Mol. Evol.|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.
http://togogenome.org/gene/4081:Det1 ^@ http://purl.uniprot.org/uniprot/Q9ZNU6 ^@ 12589545|||9927635 ^@ Plant Cell|||Theor. Appl. Genet. ^@ Phenotype of the tomato high pigment-2 mutant is caused by a mutation in the tomato homolog of DEETIOLATED1.|||The tomato dark green mutation is a novel allele of the tomato homolog of the DEETIOLATED1 gene. ^@ Alfano F.|||Bowler C.|||Ciliento R.|||Fenzi F.|||Frankel P.|||Gilboa N.|||Lalazar A.|||Levin I.|||Mustilli A.C.|||Tanny S.
http://togogenome.org/gene/4081:LyesC2p079 ^@ http://purl.uniprot.org/uniprot/A0A0C5CEA5|||http://purl.uniprot.org/uniprot/Q2MIB0 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LOC101055591 ^@ http://purl.uniprot.org/uniprot/I7AL54 ^@ 19245327 ^@ Mol Plant Microbe Interact|||Mol. Plant Microbe Interact. ^@ A secreted SPRY domain-containing protein (SPRYSEC) from the plant-parasitic nematode Globodera rostochiensis interacts with a CC-NB-LRR protein from a susceptible tomato. ^@ Bakker J.|||Goverse A.|||Overmars H.|||Petrescu A.J.|||Postma W.|||Prins P.|||Qin L.|||Rehman S.|||Smant G.|||Spiridon L.N.|||Tytgat T.|||Vossen J.
http://togogenome.org/gene/4081:XET2 ^@ http://purl.uniprot.org/uniprot/Q9FZ05 ^@ 11706197 ^@ Plant Physiol|||Plant Physiol. ^@ Characterization of a tomato xyloglucan endotransglycosylase gene that is down-regulated by auxin in etiolated hypocotyls. ^@ Albersheim P.|||Bennett A.B.|||Catala C.|||Darvill A.G.|||Rose J.K.|||York W.S.
http://togogenome.org/gene/4081:PPCK2 ^@ http://purl.uniprot.org/uniprot/Q84JP7 ^@ 10571893 ^@ Plant J. ^@ Phosphoenolpyruvate carboxylase kinase is a novel protein kinase regulated at the level of expression. ^@ Gill A.|||Hartwell J.|||Jenkins G.I.|||Nimmo G.A.|||Nimmo H.G.|||Wilkins M.B.
http://togogenome.org/gene/4081:BSL1 ^@ http://purl.uniprot.org/uniprot/G8Z285 ^@ 22885736 ^@ Plant Cell ^@ Host Protein BSL1 Associates with Phytophthora infestans RXLR Effector AVR2 and the Solanum demissum Immune Receptor R2 to Mediate Disease Resistance.|||Host protein BSL1 associates with Phytophthora infestans RXLR effector AVR2 and the Solanum demissum Immune receptor R2 to mediate disease resistance. ^@ Birch P.R.|||Bozkurt T.O.|||Breen S.|||Champouret N.|||Gilroy E.M.|||Hein I.|||Kamoun S.|||Saunders D.G.|||Schornack S.|||Vleeshouwers V.G.|||Win J.
http://togogenome.org/gene/4081:LyesC2p027 ^@ http://purl.uniprot.org/uniprot/A0A0C5CUV9|||http://purl.uniprot.org/uniprot/Q2MI58 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:CO1 ^@ http://purl.uniprot.org/uniprot/Q2VY10 ^@ 16623906 ^@ Plant J|||Plant J. ^@ The CCAAT binding factor can mediate interactions between CONSTANS-like proteins and DNA. ^@ Ben-Naim O.|||Coupland G.|||Eshed R.|||Lifschitz E.|||Parnis A.|||Samach A.|||Shalit A.|||Teper-Bamnolker P.
http://togogenome.org/gene/4081:LOC101245249 ^@ http://purl.uniprot.org/uniprot/A0A3Q7G7P4 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:TIL' ^@ http://purl.uniprot.org/uniprot/Q38JE1 ^@ 16306142 ^@ Plant Physiol|||Plant Physiol. ^@ Identification, expression, and evolutionary analyses of plant lipocalins. ^@ Charron J.B.|||Chauve C.|||Danyluk J.|||Frenette Charron J.B.|||Ouellet F.|||Pelletier M.|||Sarhan F.
http://togogenome.org/gene/4081:HXK4 ^@ http://purl.uniprot.org/uniprot/Q4PS96 ^@ 16761134 ^@ Planta ^@ Two newly identified membrane-associated and plastidic tomato HXKs: characteristics, predicted structure and intracellular localization. ^@ Adir N.|||Belausov E.|||Damari-Weissler H.|||German M.A.|||Gidoni D.|||Granot D.|||Kandel-Kfir M.|||Mett A.|||Petreikov M.
http://togogenome.org/gene/4081:LOC101251796 ^@ http://purl.uniprot.org/uniprot/K4CH09 ^@ 27579028 ^@ Front Plant Sci|||Front. Plant Sci. ^@ Genome-Wide Study of the Tomato SlMLO Gene Family and Its Functional Characterization in Response to the Powdery Mildew Fungus Oidium neolycopersici. ^@ Appiano M.|||Bai Y.|||Bracuto V.|||Pavan S.|||Ricciardi L.|||Visser R.G.|||Wolters A.M.|||Zheng Z.
http://togogenome.org/gene/4081:CAB-10A ^@ http://purl.uniprot.org/uniprot/P27524 ^@ 2103430 ^@ Plant Mol. Biol. ^@ Sequence of two tomato nuclear genes encoding chlorophyll a/b-binding proteins of CP24, a PSII antenna component. ^@ Pichersky E.|||Schwartz E.
http://togogenome.org/gene/4081:LyesC2p036 ^@ http://purl.uniprot.org/uniprot/A0A0C5CEE4|||http://purl.uniprot.org/uniprot/Q2MI67 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LOC101249565 ^@ http://purl.uniprot.org/uniprot/K4CI52 ^@ 25039074 ^@ J. Exp. Bot. ^@ SlNCED1 and SlCYP707A2: key genes involved in ABA metabolism during tomato fruit ripening. ^@ Chen P.|||Dai S.|||Guo Y.|||Ji K.|||Kai W.|||Leng P.|||Li Q.|||Pei Y.|||Sun Y.|||Wang H.|||Wang Y.|||Yuan B.|||Zhao B.
http://togogenome.org/gene/4081:SlIPT1 ^@ http://purl.uniprot.org/uniprot/I0IUP6 ^@ 22865911 ^@ J Exp Bot|||J. Exp. Bot. ^@ Roles and regulation of cytokinins in tomato fruit development. ^@ Fukuda M.|||Honda I.|||Imanishi S.|||Kikuchi K.|||Matsuo S.
http://togogenome.org/gene/4081:SERK3A ^@ http://purl.uniprot.org/uniprot/G0XZA5 ^@ 21481032 ^@ Plant J|||Plant J. ^@ The receptor-like kinase SlSERK1 is required for Mi-1-mediated resistance to potato aphids in tomato. ^@ Atamian H.S.|||Kaloshian I.|||Li B.|||Mantelin S.|||Peng H.C.|||Takken F.L.
http://togogenome.org/gene/4081:LOC101055593 ^@ http://purl.uniprot.org/uniprot/I7CL55 ^@ 23001036 ^@ Plant Cell ^@ Failure of the Tomato Trans-Acting Short Interfering RNA Program to Regulate AUXIN RESPONSE FACTOR3 and ARF4 Underlies the Wiry Leaf Syndrome.|||Failure of the tomato trans-acting short interfering RNA program to regulate AUXIN RESPONSE FACTOR3 and ARF4 underlies the wiry leaf syndrome. ^@ Alvarez J.P.|||Amsellem Z.|||Eshed Y.|||Friedlander G.|||Pekker I.|||Peled D.|||Pistunov A.|||Sabban M.|||Wachsman G.|||Yifhar T.
http://togogenome.org/gene/4081:AML1 ^@ http://purl.uniprot.org/uniprot/Q6J732 ^@ 15356386 ^@ Plant Mol. Biol. ^@ Diversification of genes encoding mei2 -like RNA binding proteins in plants. ^@ Alvarez N.D.|||Anderson G.H.|||Gilman C.|||Hanson M.R.|||Jeffares D.C.|||Trainor V.C.|||Veit B.
http://togogenome.org/gene/4081:LOC544080 ^@ http://purl.uniprot.org/uniprot/P35057 ^@ 7764315 ^@ Planta ^@ The pattern of histone H4 expression in the tomato shoot apex changes during development. ^@ Brandstaedter J.U.|||Rossbach C.|||Thers K.
http://togogenome.org/gene/4081:CYP97A29 ^@ http://purl.uniprot.org/uniprot/D2CV80 ^@ 21450689 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ Characterization of P450 Carotenoid {beta}- and {varepsilon}-Hydroxylases of Tomato and Transcriptional Regulation of Xanthophyll Biosynthesis in Root, Leaf, Petal and Fruit.|||Characterization of P450 carotenoid beta- and epsilon-hydroxylases of tomato and transcriptional regulation of xanthophyll biosynthesis in root, leaf, petal and fruit. ^@ D'Ambrosio C.|||Giorio G.|||Stigliani A.L.
http://togogenome.org/gene/4081:LOC101266779 ^@ http://purl.uniprot.org/uniprot/A0A3Q7F9W7 ^@ 32167545 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ A Group of O-Acetyltransferases Catalyze Xyloglucan Backbone Acetylation and Can Alter Xyloglucan Xylosylation Pattern and Plant Growth When Expressed in Arabidopsis.|||A group of O-acetyltransferases catalyze xyloglucan backbone acetylation and can alter xyloglucan xylosylation pattern and plant growth when expressed in Arabidopsis. ^@ Cui D.|||Phillips D.R.|||Richardson E.A.|||Ye Z.H.|||Zhong R.
http://togogenome.org/gene/4081:LyesC2p063 ^@ http://purl.uniprot.org/uniprot/A0A0C5C9T7|||http://purl.uniprot.org/uniprot/Q2MI94 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LOC101247478 ^@ http://purl.uniprot.org/uniprot/B1N672 ^@ 18339939 ^@ Science ^@ A retrotransposon-mediated gene duplication underlies morphological variation of tomato fruit. ^@ Jiang N.|||Schaffner E.|||Stockinger E.J.|||Xiao H.|||van der Knaap E.
http://togogenome.org/gene/4081:LyesC2p087 ^@ http://purl.uniprot.org/uniprot/A0A0C5CUK8|||http://purl.uniprot.org/uniprot/Q2MIB8 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:PAT ^@ http://purl.uniprot.org/uniprot/E5LBC4 ^@ 21750236 ^@ Plant Cell ^@ Identification of Genes in the Phenylalanine Metabolic Pathway by Ectopic Expression of a MYB Transcription Factor in Tomato Fruit.|||Identification of genes in the phenylalanine metabolic pathway by ectopic expression of a MYB transcription factor in tomato fruit. ^@ Dal Cin V.|||Fernie A.R.|||Giovannoni J.|||Haring M.A.|||Klee H.J.|||McQuinn R.|||Osorio S.|||Schmelz E.A.|||Schuurink R.C.|||Smits-Kroon M.T.|||Taylor M.G.|||Tieman D.M.|||Tohge T.|||de Vos R.C.
http://togogenome.org/gene/4081:LOC543961 ^@ http://purl.uniprot.org/uniprot/P49037 ^@ 8290642 ^@ Plant Physiol. ^@ Isolation and sequencing of tomato fruit sucrose synthase cDNA. ^@ Brenner M.L.|||Smith A.G.|||Wang F.
http://togogenome.org/gene/4081:CPT7 ^@ http://purl.uniprot.org/uniprot/K4CA50 ^@ 23134568 ^@ Plant J. ^@ The tomato cis-prenyltransferase gene family. ^@ Akhtar T.A.|||Klein S.E.|||Lees H.A.|||Matsuba Y.|||Pichersky E.|||Schauvinhold I.|||Yu G.
http://togogenome.org/gene/4081:cel5 ^@ http://purl.uniprot.org/uniprot/O82473 ^@ 10555309 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ Molecular characterization of a tomato endo-beta-1,4-glucanase gene expressed in mature pistils, abscission zones and fruit. ^@ Hong S.B.|||Kalaitzis P.|||Solomos T.|||Tucker M.L.
http://togogenome.org/gene/4081:LOC100736535 ^@ http://purl.uniprot.org/uniprot/F6KQN5 ^@ 21398570 ^@ Plant Cell ^@ Transcriptome and Metabolite Profiling Show That APETALA2a Is a Major Regulator of Tomato Fruit Ripening.|||Transcriptome and metabolite profiling show that APETALA2a is a major regulator of tomato fruit ripening. ^@ Angenent G.C.|||Baxter C.|||Busscher-Lange J.|||Do P.T.|||Fernie A.R.|||Fraser P.D.|||Karlova R.|||Parapunova V.|||Rosin F.M.|||de Maagd R.A.
http://togogenome.org/gene/4081:LOC544061 ^@ http://purl.uniprot.org/uniprot/Q02021|||http://purl.uniprot.org/uniprot/Q02022 ^@ 1714316 ^@ Plant Mol. Biol. ^@ Tomato extensin and extensin-like cDNAs: structure and expression in response to wounding. ^@ Rumeau D.|||Showalter A.M.|||Varner J.E.|||Worst S.G.|||Zhou J.
http://togogenome.org/gene/4081:Psy1 ^@ http://purl.uniprot.org/uniprot/A1Z0Z4|||http://purl.uniprot.org/uniprot/P08196 ^@ 1544888|||1623189|||18167141|||23406468|||3697097|||8250898|||8343597 ^@ Biochem. Biophys. Res. Commun.|||FEBS J|||FEBS J.|||J. Biol. Chem.|||New Phytol.|||Nucleic Acids Res.|||Plant Mol. Biol. ^@ A STAY-GREEN protein SlSGR1 regulates lycopene and beta-carotene accumulation by interacting directly with SlPSY1 during ripening processes in tomato.|||A tomato gene expressed during fruit ripening encodes an enzyme of the carotenoid biosynthesis pathway.|||Cloning and characterization of a gene involved in phytoene synthesis from tomato.|||Expression of the genes encoding the early carotenoid biosynthetic enzymes in Capsicum annuum.|||Identification and genetic analysis of normal and mutant phytoene synthase genes of tomato by sequencing, complementation and co-suppression.|||Phytoene synthase genes in tomato (Solanumlycopersicum L.) - new data on the structures, the deduced amino acid sequences and the expression patterns.|||Sequence of pTOM5, a ripening related cDNA from tomato. ^@ Bacot K.O.|||Bartley G.E.|||Bird A.|||Bird C.|||Bird C.R.|||Bouvier F.|||Bramley P.|||Camara B.|||D'Ambrosio C.|||Fray R.G.|||Giorio G.|||Giovannoni J.|||Grierson D.|||Hugueney P.|||Kuntz M.|||Li H.|||Li J.|||Luo Z.|||Maunders M.|||Moureau P.|||Ouyang B.|||Ray J.|||Roemer S.|||Schuch W.|||Scolnik P.A.|||Stigliani A.L.|||Truesdale M.|||Viitanen P.V.|||Wang T.|||Yang C.|||Ye Z.|||Zhang J.
http://togogenome.org/gene/4081:LOC101055546 ^@ http://purl.uniprot.org/uniprot/G9HPW1 ^@ 22368074 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ Genome-Wide Identification, Functional Analysis and Expression Profiling of the Aux/IAA Gene Family in Tomato.|||Genome-wide identification, functional analysis and expression profiling of the Aux/IAA gene family in tomato. ^@ Audran-Delalande C.|||Bassa C.|||Bouzayen M.|||Mila I.|||Regad F.|||Zouine M.
http://togogenome.org/gene/4081:SlscADH1 ^@ http://purl.uniprot.org/uniprot/I3XL71 ^@ 22818888 ^@ J Plant Physiol|||J. Plant Physiol. ^@ Functional characterization of SlscADH1, a fruit-ripening-associated short-chain alcohol dehydrogenase of tomato. ^@ Benichou M.|||Chervin C.|||Ginies C.|||Latche A.|||Moummou H.|||Pech J.C.|||Tonfack L.B.|||Youmbi E.|||van der Rest B.
http://togogenome.org/gene/4081:LHA2 ^@ http://purl.uniprot.org/uniprot/Q9SPD5 ^@ 16667929|||7991683 ^@ Plant Physiol|||Plant Physiol. ^@ Assessment of the number and expression of P-type H(+)-ATPase genes in tomato.|||Molecular cloning of tomato plasma membrane H+-ATPase. ^@ Bennett A.B.|||Chetelat R.T.|||Ewing N.N.|||Meyer D.J.|||Wimmers L.E.
http://togogenome.org/gene/4081:LOC101267898 ^@ http://purl.uniprot.org/uniprot/Q5GA60 ^@ 16009996 ^@ Plant Physiol|||Plant Physiol. ^@ Complex organization and evolution of the tomato pericentromeric region at the FER gene locus. ^@ Cheng X.|||Cheng Z.|||Guyot R.|||Keller B.|||Ling H.Q.|||Schlagenhauf E.|||Su Y.
http://togogenome.org/gene/4081:DHQS ^@ http://purl.uniprot.org/uniprot/Q8RU74 ^@ 8704160 ^@ Plant Mol. Biol. ^@ Cloning of a cDNA encoding a 3-dehydroquinate synthase from a higher plant, and analysis of the organ-specific and elicitor-induced expression of the corresponding gene. ^@ Amrhein N.|||Bischoff M.|||Gorlach J.|||Raesecke H.R.|||Rosler J.|||Schmid J.
http://togogenome.org/gene/4081:LOC100736486 ^@ http://purl.uniprot.org/uniprot/G3KGB4 ^@ 21880077 ^@ Plant J|||Plant J. ^@ A tomato LysM receptor-like kinase promotes immunity and its kinase activity is inhibited by AvrPtoB. ^@ Martin G.B.|||Munkvold K.R.|||Velasquez A.C.|||Zeng L.|||Zhang J.
http://togogenome.org/gene/4081:PIN7 ^@ http://purl.uniprot.org/uniprot/E5KGD2 ^@ 22211518 ^@ Plant J|||Plant J. ^@ Evaluating auxin distribution in tomato (Solanum lycopersicum) through an analysis of the PIN and AUX/LAX gene families. ^@ Catala C.|||Pattison R.J.
http://togogenome.org/gene/4081:SlDEAD30 ^@ http://purl.uniprot.org/uniprot/K4CX84 ^@ 26241658 ^@ PLoS ONE|||PLoS One ^@ SlDEAD31, a Putative DEAD-Box RNA Helicase Gene, Regulates Salt and Drought Tolerance and Stress-Related Genes in Tomato. ^@ Chen G.|||Dong T.|||Hu Z.|||Wang L.|||Zhang J.|||Zhao Z.|||Zhu M.
http://togogenome.org/gene/4081:LOC101245015 ^@ http://purl.uniprot.org/uniprot/K4BAZ1 ^@ 27909045 ^@ Plant Physiol|||Plant Physiol. ^@ A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity. ^@ Chen X.|||Connor R.A.|||Gough J.|||Martin G.B.|||Mural R.V.|||Oates M.E.|||Zeng L.|||Zhou B.
http://togogenome.org/gene/4081:TPS3 ^@ http://purl.uniprot.org/uniprot/G1JUH1 ^@ 21813655 ^@ Plant Physiol. ^@ The tomato terpene synthase gene family. ^@ Akhtar T.A.|||Bleeker P.M.|||Bonini M.E.|||Falara V.|||Last R.L.|||Matsuba Y.|||Nguyen T.T.|||Nguyen T.T.H.|||Pichersky E.|||Schauvinhold I.|||Schilmiller A.L.|||Schuurink R.C.|||Spyropoulou E.A.
http://togogenome.org/gene/4081:gMDH ^@ http://purl.uniprot.org/uniprot/Q645M9 ^@ 15665243 ^@ Plant Physiol|||Plant Physiol. ^@ Enhanced photosynthetic performance and growth as a consequence of decreasing mitochondrial malate dehydrogenase activity in transgenic tomato plants. ^@ Carrari F.|||Fernie A.R.|||Loureiro M.E.|||Lytovchenko A.|||Nunes-Nesi A.|||Ratcliffe R.G.|||Smith A.M.|||Sweetlove L.J.
http://togogenome.org/gene/4081:LOC543970 ^@ http://purl.uniprot.org/uniprot/Q9STB2 ^@ 8806422 ^@ Plant Mol Biol|||Plant Mol. Biol. ^@ Isolation of a cDNA from tomato coding for an unregulated, cytosolic chorismate mutase. ^@ Amrhein N.|||Bischoff M.|||Eberhard J.|||Raesecke H.R.|||Schmid J.
http://togogenome.org/gene/4081:ARPI ^@ http://purl.uniprot.org/uniprot/Q43710 ^@ 7903168|||8159801 ^@ Plant Mol. Biol.|||Plant Physiol. ^@ An auxin-inducible proteinase inhibitor gene from tomato.|||Induction of a proteinase inhibitor II-class gene by auxin in tomato roots. ^@ Harris-Haller L.|||Scheuring C.F.|||Taylor B.H.|||Young R.J.
http://togogenome.org/gene/4081:PAP1 ^@ http://purl.uniprot.org/uniprot/A0A0C5AJS1 ^@ 25656565 ^@ Plant Cell Rep|||Plant Cell Rep. ^@ Molecular characterization of a tomato purple acid phosphatase during seed germination and seedling growth under phosphate stress. ^@ Suen P.K.|||Sun S.S.|||Zhang S.
http://togogenome.org/gene/4081:Pti1 ^@ http://purl.uniprot.org/uniprot/Q41328 ^@ 8521516 ^@ Cell ^@ The tomato gene Pti1 encodes a serine/threonine kinase that is phosphorylated by Pto and is involved in the hypersensitive response. ^@ Bressan R.A.|||Loh Y.T.|||Martin G.B.|||Zhou J.
http://togogenome.org/gene/4081:LOC101249254 ^@ http://purl.uniprot.org/uniprot/A0A3Q7JDZ0 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:LKT1 ^@ http://purl.uniprot.org/uniprot/Q9LEG6 ^@ 10805443 ^@ Planta ^@ Functional characterisation of LKT1, a K+ uptake channel from tomato root hairs, and comparison with the closely related potato inwardly rectifying K+ channel SKT1 after expression in Xenopus oocytes. ^@ Hartje S.|||Klonus D.|||Mueller-Roeber B.|||Zimmermann S.
http://togogenome.org/gene/4081:LOC543862 ^@ http://purl.uniprot.org/uniprot/Q84XV7 ^@ 15449061 ^@ Planta ^@ Two isoforms of the A subunit of the vacuolar H(+)-ATPase in Lycopersicon esculentum: highly similar proteins but divergent patterns of tissue localization. ^@ Bageshwar U.K.|||Binzel M.L.|||Moharram H.M.|||Taneja-Bageshwar S.
http://togogenome.org/gene/4081:rnaseLER ^@ http://purl.uniprot.org/uniprot/A0AQW5 ^@ 21237531 ^@ J Plant Physiol|||J. Plant Physiol. ^@ The Solanum lycopersicum RNaseLER is a class II enzyme of the RNase T2 family and shows preferential expression in guard cells. ^@ Kock M.|||Kothke S.
http://togogenome.org/gene/4081:SAP2 ^@ http://purl.uniprot.org/uniprot/C4NAK1 ^@ 19424724 ^@ Mol Genet Genomics|||Mol. Genet. Genomics ^@ Characterization and phylogenetic analysis of environmental stress-responsive SAP gene family encoding A20/AN1 zinc finger proteins in tomato. ^@ Sharma A.K.|||Sharma M.K.|||Solanke A.U.|||Tyagi A.K.
http://togogenome.org/gene/4081:FZY4 ^@ http://purl.uniprot.org/uniprot/D2IGV3 ^@ 21435892 ^@ Plant Physiol Biochem|||Plant Physiol. Biochem. ^@ Gene structure and spatiotemporal expression profile of tomato genes encoding YUCCA-like flavin monooxygenases: The ToFZY gene family.|||Gene structure and spatiotemporal expression profile of tomato genes encoding YUCCA-like flavin monooxygenases: the ToFZY gene family. ^@ Borges A.A.|||Borges-Perez A.|||Exposito-Rodriguez M.|||Perez J.A.
http://togogenome.org/gene/4081:LOC101261945 ^@ http://purl.uniprot.org/uniprot/K4CN83 ^@ 23292788 ^@ Plant Physiol|||Plant Physiol. ^@ Network Inference Analysis Identifies an APRR2-Like Gene Linked to Pigment Accumulation in Tomato and Pepper Fruits.|||Network inference analysis identifies an APRR2-like gene linked to pigment accumulation in tomato and pepper fruits. ^@ Ball G.|||Baxter C.|||Boyden L.|||Bradley G.|||Cade R.|||Chapman N.H.|||Fraser P.D.|||Fray R.|||Hodgman C.|||Jayasuta S.|||Lu C.|||Marshall A.|||Pan Y.|||Pyke K.|||Seymour G.B.|||van Wijk R.
http://togogenome.org/gene/4081:LOC101252133 ^@ http://purl.uniprot.org/uniprot/A0A3Q7IN69 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:LOC101258756 ^@ http://purl.uniprot.org/uniprot/K4C3H8 ^@ 28649260 ^@ Front Plant Sci|||Front. Plant Sci. ^@ Tomato UDP-Glucose Sterol Glycosyltransferases: A Family of Developmental and Stress Regulated Genes that Encode Cytosolic and Membrane-Associated Forms of the Enzyme. ^@ Altabella T.|||Arro M.|||Boronat A.|||Castillo N.|||Ferrer A.|||Lara J.A.|||Ramirez-Estrada K.
http://togogenome.org/gene/4081:HO1 ^@ http://purl.uniprot.org/uniprot/Q94FW7 ^@ 11402195 ^@ Plant Physiol. ^@ The heme-oxygenase family required for phytochrome chromophore biosynthesis is necessary for proper photomorphogenesis in higher plants. ^@ Bhoo S.H.|||Davis S.J.|||Durski A.M.|||Vierstra R.D.|||Walker J.M.
http://togogenome.org/gene/4081:LyesC2p046 ^@ http://purl.uniprot.org/uniprot/A0A0C5CHF5|||http://purl.uniprot.org/uniprot/Q2MI77 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:MTS1 ^@ http://purl.uniprot.org/uniprot/Q1XBU5 ^@ 17440821|||21813655 ^@ Plant Mol. Biol.|||Plant Physiol. ^@ The tomato terpene synthase gene family.|||Tomato linalool synthase is induced in trichomes by jasmonic acid. ^@ Akhtar T.A.|||Bleeker P.M.|||Bonini M.E.|||Falara V.|||Haring M.A.|||Last R.L.|||Matsuba Y.|||Nguyen T.T.|||Nguyen T.T.H.|||Pichersky E.|||Schauvinhold I.|||Schilmiller A.L.|||Schuurink R.C.|||Spyropoulou E.A.|||van Schie C.C.
http://togogenome.org/gene/4081:LOC101254242 ^@ http://purl.uniprot.org/uniprot/K4CYK1 ^@ 27909045 ^@ Plant Physiol|||Plant Physiol. ^@ A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity. ^@ Chen X.|||Connor R.A.|||Gough J.|||Martin G.B.|||Mural R.V.|||Oates M.E.|||Zeng L.|||Zhou B.
http://togogenome.org/gene/4081:CNX61.0 ^@ http://purl.uniprot.org/uniprot/Q4W5U7 ^@ 16904232 ^@ J Plant Physiol|||J. Plant Physiol. ^@ Constitutive expression of an endoplasmic reticulum small heat shock protein alleviates endoplasmic reticulum stress in transgenic tomato. ^@ Li M.|||Li M.H.|||Liu J.|||Shono M.|||Sun A.|||Sun A.Q.|||Yi S.|||Yi S.Y.|||Zhao C.|||Zhao C.M.
http://togogenome.org/gene/4081:mpka1;1 ^@ http://purl.uniprot.org/uniprot/Q84MI6 ^@ 12913131 ^@ Plant Physiol|||Plant Physiol. ^@ Convergence of signaling pathways induced by systemin, oligosaccharide elicitors, and ultraviolet-B radiation at the level of mitogen-activated protein kinases in Lycopersicon peruvianum suspension-cultured cells. ^@ Holley S.R.|||Moura D.S.|||Ryan C.A.|||Stratmann J.W.|||Yalamanchili R.D.
http://togogenome.org/gene/4081:LOC543565 ^@ http://purl.uniprot.org/uniprot/Q947S8 ^@ 11752381 ^@ Plant Cell ^@ Tomato SP-interacting proteins define a conserved signaling system that regulates shoot architecture and flowering. ^@ Adir N.|||Ben-Naim O.|||Gutfinger T.|||Hareven D.|||Lifschitz E.|||Pnueli L.|||Ron N.
http://togogenome.org/gene/4081:CRTISO ^@ http://purl.uniprot.org/uniprot/Q8S4R4 ^@ 11884678|||15557094 ^@ Plant Cell|||Plant Physiol. ^@ Analysis in vitro of the enzyme CRTISO establishes a poly-cis-carotenoid biosynthesis pathway in plants.|||Cloning of tangerine from tomato reveals a carotenoid isomerase essential for the production of beta-carotene and xanthophylls in plants. ^@ Beyer P.|||Hirschberg J.|||Isaacson T.|||Ohad I.|||Ronen G.|||Zamir D.
http://togogenome.org/gene/4081:psi14C ^@ http://purl.uniprot.org/uniprot/Q9FPR1 ^@ 11161030|||12702022 ^@ Physiol Plant|||Physiol. Plantarum|||Plant Physiol|||Plant Physiol. ^@ Differential expression of the LePS2 phosphatase gene family in response to phosphate availability, pathogen infection and during development.|||LEPS2, a phosphorus starvation-induced novel acid phosphatase from tomato. ^@ Baldwin J.C.|||Bosse D.|||Hertel S.C.|||Karthikeyan A.S.|||Kock M.|||Raghothama K.G.|||Schurath J.|||Stenzel I.|||Ziethe K.
http://togogenome.org/gene/4081:LOC606305 ^@ http://purl.uniprot.org/uniprot/Q9ARC6 ^@ 11283350 ^@ Plant Cell ^@ Comparative sequence analysis reveals extensive microcolinearity in the lateral suppressor regions of the tomato, Arabidopsis, and Capsella genomes. ^@ Acarkan A.|||Herrero R.|||Rossberg M.|||Schmidt R.|||Schmitt T.|||Schmitz G.|||Schumacher K.|||Theres K.
http://togogenome.org/gene/4081:LyesC2p011 ^@ http://purl.uniprot.org/uniprot/A0A0C5CEG4|||http://purl.uniprot.org/uniprot/Q2MI44 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:AMT1-3 ^@ http://purl.uniprot.org/uniprot/Q9FVN0 ^@ 10743657 ^@ Plant J. ^@ Differential regulation of three functional ammonium transporter genes by nitrogen in root hairs and by light in leaves of tomato. ^@ Engels C.|||Frommer W.B.|||Gillissen B.|||Jost W.|||Lauter F.-R.|||Ninnemann O.|||Walch-Liu P.|||von Wiren N.
http://togogenome.org/gene/4081:LOC101055554 ^@ http://purl.uniprot.org/uniprot/G9HPX4 ^@ 22368074 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ Genome-Wide Identification, Functional Analysis and Expression Profiling of the Aux/IAA Gene Family in Tomato.|||Genome-wide identification, functional analysis and expression profiling of the Aux/IAA gene family in tomato. ^@ Audran-Delalande C.|||Bassa C.|||Bouzayen M.|||Mila I.|||Regad F.|||Zouine M.
http://togogenome.org/gene/4081:LOC101244210 ^@ http://purl.uniprot.org/uniprot/K4CJ08 ^@ 24260152 ^@ PLoS ONE|||PLoS One ^@ Genome-wide identification and expression analysis of aquaporins in tomato. ^@ Akiyama M.|||Aoki K.|||Mori C.|||Reuscher S.|||Shibata D.|||Shiratake K.
http://togogenome.org/gene/4081:MTA ^@ http://purl.uniprot.org/uniprot/A8DUB1|||http://purl.uniprot.org/uniprot/Q40157 ^@ 18324417|||9049270 ^@ Mol Genet Genomics|||Mol. Genet. Genomics|||Plant Mol. Biol. ^@ Programmed cell death suppression in transformed plant tissue by tomato cDNAs identified from an Agrobacterium rhizogenes-based functional screen.|||The isolation and characterization of type II metallothionein-like genes from tomato (Lycopersicon esculentum L.). ^@ Gilchrist D.G.|||Harvey J.J.|||Le Huquet J.A.|||Lincoln J.E.|||Thurman D.A.|||Tomsett A.B.|||Whitelaw C.A.
http://togogenome.org/gene/4081:dxs ^@ http://purl.uniprot.org/uniprot/Q9XH50 ^@ 10886770 ^@ Plant J|||Plant J. ^@ Carotenoid biosynthesis during tomato fruit development: regulatory role of 1-deoxy-D-xylulose 5-phosphate synthase. ^@ Boronat A.|||Campos N.|||Gallego F.|||Lois L.M.|||Rodriguez-Concepcion M.
http://togogenome.org/gene/4081:LOC544144 ^@ http://purl.uniprot.org/uniprot/Q07491 ^@ 8278519 ^@ Plant Physiol|||Plant Physiol. ^@ Nucleotide sequence of a cDNA clone encoding tomato (Lycopersicon esculentum) cysteine proteinase. ^@ Bol J.F.|||Linthorst H.J.|||van Kan J.A.|||van der Does C.
http://togogenome.org/gene/4081:LOC101055550 ^@ http://purl.uniprot.org/uniprot/G9HPW8 ^@ 22368074 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ Genome-Wide Identification, Functional Analysis and Expression Profiling of the Aux/IAA Gene Family in Tomato.|||Genome-wide identification, functional analysis and expression profiling of the Aux/IAA gene family in tomato. ^@ Audran-Delalande C.|||Bassa C.|||Bouzayen M.|||Mila I.|||Regad F.|||Zouine M.
http://togogenome.org/gene/4081:Sl3-MMP ^@ http://purl.uniprot.org/uniprot/I7JCM3 ^@ 26070456|||27208293 ^@ BMC Plant Biol|||BMC Plant Biol.|||Plant Physiol|||Plant Physiol. ^@ Cell Death Control by Matrix Metalloproteinases.|||Tomato Sl3-MMP, a member of the Matrix metalloproteinase family, is required for disease resistance against Botrytis cinerea and Pseudomonas syringae pv. tomato DC3000. ^@ Brack-Frick U.B.|||Gomez-Barrera J.A.|||Hong Y.|||Huang L.|||Li D.|||Liu S.|||Nicholson T.M.|||Pasule C.|||Pfannstiel J.|||Schaller A.|||Sieferer E.|||Song F.|||Song Q.|||Stintzi A.|||Wang L.|||Zhang H.|||Zimmermann D.
http://togogenome.org/gene/4081:LOC101264008 ^@ http://purl.uniprot.org/uniprot/Q9LLC7 ^@ 11952131 ^@ Mol Plant Microbe Interact|||Mol. Plant Microbe Interact. ^@ Functional analyses of the Pto resistance gene family in tomato and the identification of a minor resistance determinant in a susceptible haplotype. ^@ Bernal A.J.|||Chang J.H.|||Lavelle D.T.|||Michelmore R.W.|||Staskawicz B.J.|||Tai Y.S.
http://togogenome.org/gene/4081:EXP2 ^@ http://purl.uniprot.org/uniprot/O82625 ^@ 10677445|||10938357 ^@ Plant Physiol|||Plant Physiol. ^@ Auxin-regulated genes encoding cell wall-modifying proteins are expressed during early tomato fruit growth.|||Limited correlation between expansin gene expression and elongation growth rate. ^@ Bennett A.B.|||Caderas D.|||Catala C.|||Kuhlemeier C.|||Mandel T.|||McQueen-Mason S.|||Muster M.|||Rose J.K.|||Vogler H.
http://togogenome.org/gene/4081:LOC543812 ^@ http://purl.uniprot.org/uniprot/Q8W505 ^@ 11669575 ^@ Plant Mol Biol|||Plant Mol. Biol. ^@ Ripening-related occurrence of phosphoenolpyruvate carboxykinase in tomato fruit. ^@ Bahrami A.R.|||Chen Z.H.|||Gray J.E.|||Leegood R.C.|||Walker R.P.
http://togogenome.org/gene/4081:PTS ^@ http://purl.uniprot.org/uniprot/B2Y2G9 ^@ 18424140 ^@ Curr Biol|||Curr. Biol. ^@ Natural variation in leaf morphology results from mutation of a novel KNOX gene. ^@ Kang J.|||Kimura S.|||Koenig D.|||Sinha N.|||Yoong F.Y.
http://togogenome.org/gene/4081:AAT ^@ http://purl.uniprot.org/uniprot/Q6QLX4 ^@ 15326278|||23757397|||25355057 ^@ Mol Plant|||Mol. Plant|||Plant Cell|||Plant Physiol|||Plant Physiol. ^@ Divergence in the Enzymatic Activities of a Tomato and Solanum pennellii Alcohol Acyltransferase Impacts Fruit Volatile Ester Composition.|||Evolution of a complex locus for terpene biosynthesis in Solanum.|||Functional characterization of enzymes forming volatile esters from strawberry and banana. ^@ Aharoni A.|||Alvarez-Huerta M.|||Barry C.S.|||Beekwilder J.|||Bolger A.M.|||Bouwmeester H.J.|||Falara V.|||Fernie A.R.|||Gonzales-Vigil E.|||Goulet C.|||Kamiyoshihara Y.|||Klee H.J.|||Kudrna D.|||Lam N.B.|||Leong B.|||Matsuba Y.|||Neef E.|||Nguyen T.T.|||Pichersky E.|||Richard T.|||Schafer P.|||Taylor M.G.|||Tieman D.M.|||Tissier A.|||Usadel B.|||Verstappen F.W.|||Wiegert K.|||Wing R.A.
http://togogenome.org/gene/4081:LOC101265795 ^@ http://purl.uniprot.org/uniprot/K4B774 ^@ 27909045 ^@ Plant Physiol|||Plant Physiol. ^@ A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity. ^@ Chen X.|||Connor R.A.|||Gough J.|||Martin G.B.|||Mural R.V.|||Oates M.E.|||Zeng L.|||Zhou B.
http://togogenome.org/gene/4081:Suv ^@ http://purl.uniprot.org/uniprot/V5KX13 ^@ 24076975 ^@ Plant Cell ^@ The tomato Fni3 lysine-63-specific ubiquitin-conjugating enzyme and suv ubiquitin E2 variant positively regulate plant immunity. ^@ Brady J.J.|||Connor R.A.|||Hamera S.|||Liu Y.|||Martin G.B.|||Mural R.V.|||Rosebrock T.R.|||Zeng L.
http://togogenome.org/gene/4081:fer ^@ http://purl.uniprot.org/uniprot/Q5GA67 ^@ 16009996 ^@ Plant Physiol|||Plant Physiol. ^@ Complex organization and evolution of the tomato pericentromeric region at the FER gene locus. ^@ Cheng X.|||Cheng Z.|||Guyot R.|||Keller B.|||Ling H.Q.|||Schlagenhauf E.|||Su Y.
http://togogenome.org/gene/4081:LOC101265886 ^@ http://purl.uniprot.org/uniprot/P07370 ^@ 3007291 ^@ Gene ^@ Molecular characterization and genetic mapping of two clusters of genes encoding chlorophyll a/b-binding proteins in Lycopersicon esculentum (tomato). ^@ Bernatzky R.|||Breidenbach R.B.|||Cashmore A.R.|||Kausch A.P.|||Pichersky E.|||Tanksley S.D.
http://togogenome.org/gene/4081:TCP23 ^@ http://purl.uniprot.org/uniprot/G3BGW2 ^@ 24903607 ^@ BMC Plant Biol|||BMC Plant Biol. ^@ Identification, cloning and characterization of the tomato TCP transcription factor family. ^@ Angenent G.C.|||Bovy A.G.|||Busscher M.|||Busscher-Lange J.|||Karlova R.|||Lammers M.|||Parapunova V.|||de Maagd R.A.
http://togogenome.org/gene/4081:LyesC2p034 ^@ http://purl.uniprot.org/uniprot/A0A0C5CHG4|||http://purl.uniprot.org/uniprot/Q2MI65 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LOC101257002 ^@ http://purl.uniprot.org/uniprot/K4D3L7 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:Cyp-3 ^@ http://purl.uniprot.org/uniprot/Q40143 ^@ 8624407 ^@ Plant Mol. Biol. ^@ Isolation and analysis of cDNAs encoding tomato cysteine proteases expressed during leaf senescence. ^@ Cooper W.|||Drake R.|||Farrell A.|||Grierson D.|||John I.|||Schuch W.
http://togogenome.org/gene/4081:LOC543830 ^@ http://purl.uniprot.org/uniprot/Q8VWR0 ^@ 12631291 ^@ Eur J Biochem|||Eur. J. Biochem. ^@ Molecular characterization and allergenic activity of Lyc e 2 (beta-fructofuranosidase), a glycosylated allergen of tomato. ^@ Altmann F.|||Conti A.|||Crespo J.F.|||Enrique E.|||Foetisch K.|||Kolarich D.|||Lauer I.|||Rodriguez J.|||Scheurer S.|||Vieths S.|||Westphal S.
http://togogenome.org/gene/4081:pGlcT1 ^@ http://purl.uniprot.org/uniprot/K4BBC4 ^@ 24833026 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ The sugar transporter inventory of tomato: genome-wide identification and expression analysis. ^@ Akiyama M.|||Aoki K.|||Koh A.|||Makino H.|||Reuscher S.|||Shibata D.|||Shiratake K.|||Yasuda T.
http://togogenome.org/gene/4081:HTA6 ^@ http://purl.uniprot.org/uniprot/P25469 ^@ 1841722 ^@ Plant Cell ^@ Cell-specific expression of plant histone H2A genes. ^@ Comai L.|||Kiehne K.|||Koning A.J.|||Rost T.|||Tanimoto E.Y.
http://togogenome.org/gene/4081:LOC101263360 ^@ http://purl.uniprot.org/uniprot/B1N665 ^@ 18339939 ^@ Science ^@ A retrotransposon-mediated gene duplication underlies morphological variation of tomato fruit. ^@ Jiang N.|||Schaffner E.|||Stockinger E.J.|||Xiao H.|||van der Knaap E.
http://togogenome.org/gene/4081:PIP1-5 ^@ http://purl.uniprot.org/uniprot/Q08451|||http://purl.uniprot.org/uniprot/V5YN05 ^@ 24260152|||7510135 ^@ PLoS ONE|||PLoS One|||Plant Mol. Biol. ^@ Genome-wide identification and expression analysis of aquaporins in tomato.|||Nucleotide sequence and expression of a ripening and water stress-related cDNA from tomato with homology to the MIP class of membrane channel proteins. ^@ Akiyama M.|||Aoki K.|||Fray R.G.|||Grierson D.|||Lycett G.W.|||Mori C.|||Reuscher S.|||Shibata D.|||Shiratake K.|||Wallace A.
http://togogenome.org/gene/4081:XET4 ^@ http://purl.uniprot.org/uniprot/Q9FR51 ^@ 11807125 ^@ J Exp Bot|||J. Exp. Bot. ^@ A gibberellin-regulated xyloglucan endotransglycosylase gene is expressed in the endosperm cap during tomato seed germination. ^@ Bradford K.J.|||Chen F.|||Nonogaki H.
http://togogenome.org/gene/4081:PGcat ^@ http://purl.uniprot.org/uniprot/Q9ZPI8 ^@ 9990097 ^@ Proc Natl Acad Sci U S A|||Proc. Natl. Acad. Sci. U.S.A. ^@ A wound- and systemin-inducible polygalacturonase in tomato leaves. ^@ Bergey D.R.|||Orozco-Cardenas M.|||Ryan C.A.|||de Moura D.S.
http://togogenome.org/gene/4081:IMP3 ^@ http://purl.uniprot.org/uniprot/P54928 ^@ 8718627 ^@ Plant Cell ^@ Plant inositol monophosphatase is a lithium-sensitive enzyme encoded by a multigene family. ^@ Gillaspy G.E.|||Gruissem W.|||Keddie J.S.|||Oda K.
http://togogenome.org/gene/4081:LOC101254146 ^@ http://purl.uniprot.org/uniprot/K4D303 ^@ 27909045 ^@ Plant Physiol|||Plant Physiol. ^@ A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity. ^@ Chen X.|||Connor R.A.|||Gough J.|||Martin G.B.|||Mural R.V.|||Oates M.E.|||Zeng L.|||Zhou B.
http://togogenome.org/gene/4081:CHRD ^@ http://purl.uniprot.org/uniprot/A0RZC9 ^@ 16845531 ^@ Planta ^@ CHRD, a plant member of the evolutionarily conserved YjgF family, influences photosynthesis and chromoplastogenesis. ^@ Leitner-Dagan Y.|||Ohad I.|||Ovadis M.|||Shklarman E.|||Tzfira T.|||Vainstein A.|||Zuker A.
http://togogenome.org/gene/4081:LOC101245794 ^@ http://purl.uniprot.org/uniprot/A0A3Q7I7E8 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:NAM1 ^@ http://purl.uniprot.org/uniprot/B6D1Q3 ^@ 17210988|||20443064 ^@ J Exp Bot|||J. Exp. Bot.|||Mol Biol Rep|||Mol. Biol. Rep. ^@ Identification of early salt stress response genes in tomato root by suppression subtractive hybridization and microarray analysis.|||Molecular analysis of two salt-responsive NAC-family genes and their expression analysis in tomato. ^@ Deng C.|||Fei Z.|||Li H.|||Ouyang B.|||Yang R.|||Yang T.|||Ye Z.|||Zhang J.|||Zhang L.|||Zhang Y.
http://togogenome.org/gene/4081:Stig1 ^@ http://purl.uniprot.org/uniprot/Q6EEH1 ^@ 15255864|||24938288 ^@ Plant Cell|||Plant J. ^@ LeSTIG1, an extracellular binding partner for the pollen receptor kinases LePRK1 and LePRK2, promotes pollen tube growth in vitro.|||Tomato pistil factor STIG1 promotes in vivo pollen tube growth by binding to phosphatidylinositol 3-phosphate and the extracellular domain of the pollen receptor kinase LePRK2. ^@ Cotter R.|||Ezcurra I.|||Huang W.J.|||Kelley D.|||Liu H.K.|||McCormick S.|||Tang W.|||Tang W.H.
http://togogenome.org/gene/4081:LOC101268693 ^@ http://purl.uniprot.org/uniprot/A0A3Q7H0E8 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:GGPS2 ^@ http://purl.uniprot.org/uniprot/Q1A7S9 ^@ 16786318 ^@ Planta ^@ Induction of a leaf specific geranylgeranyl pyrophosphate synthase and emission of (E,E)-4,8,12-trimethyltrideca-1,3,7,11-tetraene in tomato are dependent on both jasmonic acid and salicylic acid signaling pathways. ^@ Ament K.|||Bouwmeester H.J.|||Haring M.A.|||Schuurink R.C.|||Van Schie C.C.
http://togogenome.org/gene/4081:LOC101247403 ^@ http://purl.uniprot.org/uniprot/A0A3Q7J415 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:LOC101261650 ^@ http://purl.uniprot.org/uniprot/Q01413 ^@ 1421154 ^@ Plant Mol. Biol. ^@ Differential accumulation of mRNAs encoding extracellular and intracellular PR proteins in tomato induced by virulent and avirulent races of Cladosporium fulvum. ^@ Joosten M.H.A.J.|||Wagemakers C.A.M.|||de Wit P.J.G.M.|||van Kan J.A.L.|||van den Berg-Velthuis G.C.M.
http://togogenome.org/gene/4081:Rcr3 ^@ http://purl.uniprot.org/uniprot/Q8S333 ^@ 11976458|||22829777 ^@ PLoS Genet|||PLoS Genet.|||Science ^@ A tomato cysteine protease required for Cf-2-dependent disease resistance and suppression of autonecrosis.|||Balancing Selection at the Tomato RCR3 Guardee Gene Family Maintains Variation in Strength of Pathogen Defense.|||Balancing selection at the tomato RCR3 Guardee gene family maintains variation in strength of pathogen defense. ^@ Dixon M.S.|||Golstein C.|||Horger A.C.|||Ilyas M.|||Jones J.D.|||Kruger J.|||Mulder L.|||Rose L.E.|||Smoker M.|||Stephan W.|||Tang S.|||Tellier A.|||Thomas C.M.|||van der Hoorn R.A.
http://togogenome.org/gene/4081:GPS ^@ http://purl.uniprot.org/uniprot/Q1A746 ^@ 16786318 ^@ Planta ^@ Induction of a leaf specific geranylgeranyl pyrophosphate synthase and emission of (E,E)-4,8,12-trimethyltrideca-1,3,7,11-tetraene in tomato are dependent on both jasmonic acid and salicylic acid signaling pathways. ^@ Ament K.|||Bouwmeester H.J.|||Haring M.A.|||Schuurink R.C.|||Van Schie C.C.
http://togogenome.org/gene/4081:MLO2 ^@ http://purl.uniprot.org/uniprot/A0A1C9A1D4 ^@ 27579028 ^@ Front Plant Sci|||Front. Plant Sci. ^@ Genome-Wide Study of the Tomato SlMLO Gene Family and Its Functional Characterization in Response to the Powdery Mildew Fungus Oidium neolycopersici. ^@ Appiano M.|||Bai Y.|||Bracuto V.|||Pavan S.|||Ricciardi L.|||Visser R.G.|||Wolters A.M.|||Zheng Z.
http://togogenome.org/gene/4081:MLO1 ^@ http://purl.uniprot.org/uniprot/Q56BA6 ^@ 16235112|||27579028 ^@ Front Plant Sci|||Front. Plant Sci.|||Plant Mol Biol|||Plant Mol. Biol. ^@ Discovery of novel conserved peptide domains by ortholog comparison within plant multi-protein families.|||Genome-Wide Study of the Tomato SlMLO Gene Family and Its Functional Characterization in Response to the Powdery Mildew Fungus Oidium neolycopersici. ^@ Appiano M.|||Bai Y.|||Bracuto V.|||Panstruga R.|||Pavan S.|||Ricciardi L.|||Visser R.G.|||Wolters A.M.|||Zheng Z.
http://togogenome.org/gene/4081:THT7-8 ^@ http://purl.uniprot.org/uniprot/Q8RXB6 ^@ 12900412 ^@ J Biol Chem|||J. Biol. Chem. ^@ p-Coumaroylnoradrenaline, a novel plant metabolite implicated in tomato defense against pathogens. ^@ Daniels M.J.|||Dow J.M.|||Hammond-Kosack K.E.|||Jones J.D.|||Lahaye T.|||Newman M.-A.|||Newman M.A.|||Schornack S.|||Von Roepenack-Lahaye E.|||von Roepenack-Lahaye E.
http://togogenome.org/gene/4081:PELOTA ^@ http://purl.uniprot.org/uniprot/K4BPD6 ^@ 26448569 ^@ PLoS Genet|||PLoS Genet. ^@ A Novel Route Controlling Begomovirus Resistance by the Messenger RNA Surveillance Factor Pelota. ^@ Chen L.|||Evenor D.|||Fogel D.|||Gelbart D.|||Karniel U.|||Kutsher Y.|||Lapidot M.|||Levin I.|||Makhbash Z.|||Nahon S.|||Reuveni M.|||Shlomo H.
http://togogenome.org/gene/4081:LHCP ^@ http://purl.uniprot.org/uniprot/P27525 ^@ 2103430 ^@ Plant Mol. Biol. ^@ Sequence of two tomato nuclear genes encoding chlorophyll a/b-binding proteins of CP24, a PSII antenna component. ^@ Pichersky E.|||Schwartz E.
http://togogenome.org/gene/4081:MKK2 ^@ http://purl.uniprot.org/uniprot/Q66MH8 ^@ 15371431 ^@ J Biol Chem|||J. Biol. Chem. ^@ Identification of MAPKs and their possible MAPK kinase activators involved in the Pto-mediated defense response of tomato. ^@ Martin G.B.|||Pedley K.F.
http://togogenome.org/gene/4081:GBF4 ^@ http://purl.uniprot.org/uniprot/Q43508 ^@ 8127687 ^@ Nucleic Acids Res|||Nucleic Acids Res. ^@ Novel conserved sequence motifs in plant G-box binding proteins and implications for interactive domains. ^@ Gruissem W.|||Meier I.
http://togogenome.org/gene/4081:LOC544301 ^@ http://purl.uniprot.org/uniprot/Q43496 ^@ 8219083 ^@ Plant Mol Biol|||Plant Mol. Biol. ^@ Molecular characterization of a gene encoding a cysteine-rich protein preferentially expressed in anthers of Lycopersicon esculentum. ^@ Aguirre P.J.|||Smith A.G.
http://togogenome.org/gene/4081:EXP1 ^@ http://purl.uniprot.org/uniprot/O04359 ^@ 9159182 ^@ Proc Natl Acad Sci U S A|||Proc. Natl. Acad. Sci. U.S.A. ^@ Expression of a divergent expansin gene is fruit-specific and ripening-regulated. ^@ Bennett A.B.|||Lee H.H.|||Rose J.K.
http://togogenome.org/gene/4081:GA2ox5 ^@ http://purl.uniprot.org/uniprot/A4GVL9 ^@ 17660355 ^@ Plant Physiol|||Plant Physiol. ^@ Gibberellin regulation of fruit set and growth in tomato. ^@ Fos M.|||Garcia-Martinez J.L.|||Ruiz-Rivero O.|||Sanjuan R.|||Serrani J.C.
http://togogenome.org/gene/4081:PETE ^@ http://purl.uniprot.org/uniprot/P17340 ^@ 2771658 ^@ Nucleic Acids Res. ^@ Pre-plastocyanin from Lycopersicon esculentum. ^@ Detlefsen D.J.|||Pecoraro V.L.|||Pichersky E.
http://togogenome.org/gene/4081:LOC101250739 ^@ http://purl.uniprot.org/uniprot/K4AZT8 ^@ 27909045 ^@ Plant Physiol|||Plant Physiol. ^@ A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity. ^@ Chen X.|||Connor R.A.|||Gough J.|||Martin G.B.|||Mural R.V.|||Oates M.E.|||Zeng L.|||Zhou B.
http://togogenome.org/gene/4081:cul4 ^@ http://purl.uniprot.org/uniprot/A9LK40 ^@ 18363785 ^@ Plant J|||Plant J. ^@ Altered plastid levels and potential for improved fruit nutrient content by downregulation of the tomato DDB1-interacting protein CUL4. ^@ Feng Y.|||Giovannoni J.|||Liu J.|||Liu Y.|||Niu X.|||Wang S.
http://togogenome.org/gene/4081:LOC101252702 ^@ http://purl.uniprot.org/uniprot/K4CEE8 ^@ 28194155 ^@ Front. Plant Sci. ^@ Functional characterization of CYP716 family P450 enzymes in triterpenoid biosynthesis in tomato. ^@ Fukushima E.O.|||Muranaka T.|||Seki H.|||Shimizu Y.|||Yasumoto S.
http://togogenome.org/gene/4081:PMT6 ^@ http://purl.uniprot.org/uniprot/A0A060PLC4 ^@ 24833026 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ The sugar transporter inventory of tomato: genome-wide identification and expression analysis. ^@ Akiyama M.|||Aoki K.|||Koh A.|||Makino H.|||Reuscher S.|||Shibata D.|||Shiratake K.|||Yasuda T.
http://togogenome.org/gene/4081:SP9D ^@ http://purl.uniprot.org/uniprot/Q84XK7 ^@ 14682620 ^@ Plant Mol Biol|||Plant Mol. Biol. ^@ The SELF-PRUNING gene family in tomato. ^@ Carmel-Goren L.|||Lifschitz E.|||Liu Y.S.|||Zamir D.
http://togogenome.org/gene/4081:SlCYP735A2 ^@ http://purl.uniprot.org/uniprot/I0IUQ1 ^@ 22865911 ^@ J Exp Bot|||J. Exp. Bot. ^@ Roles and regulation of cytokinins in tomato fruit development. ^@ Fukuda M.|||Honda I.|||Imanishi S.|||Kikuchi K.|||Matsuo S.
http://togogenome.org/gene/4081:HO2 ^@ http://purl.uniprot.org/uniprot/Q94FW6 ^@ 11402195 ^@ Plant Physiol. ^@ The heme-oxygenase family required for phytochrome chromophore biosynthesis is necessary for proper photomorphogenesis in higher plants. ^@ Bhoo S.H.|||Davis S.J.|||Durski A.M.|||Vierstra R.D.|||Walker J.M.
http://togogenome.org/gene/4081:LOC101257828 ^@ http://purl.uniprot.org/uniprot/Q0PY37 ^@ 16832354 ^@ Nat Genet|||Nat. Genet. ^@ A naturally occurring epigenetic mutation in a gene encoding an SBP-box transcription factor inhibits tomato fruit ripening. ^@ Giovannoni J.J.|||Hong Y.|||King G.J.|||Manning K.|||Poole M.|||Seymour G.B.|||Thompson A.J.|||Tor M.
http://togogenome.org/gene/4081:LyesC2p083 ^@ http://purl.uniprot.org/uniprot/A0A0U1ZGX1|||http://purl.uniprot.org/uniprot/Q2MIB4 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LOC101262050 ^@ http://purl.uniprot.org/uniprot/K4B017 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:TFIIIA ^@ http://purl.uniprot.org/uniprot/Q06HM7 ^@ 19211543 ^@ Genome Res. ^@ Alternative splicing of anciently exonized 5S rRNA regulates plant transcription factor TFIIIA. ^@ Bannach O.|||Barbazuk B.|||Barbazuk W.B.|||Chen H.|||Fu Y.|||Schmitz A.|||Steger G.|||Teune J.H.|||Xiong L.
http://togogenome.org/gene/4081:MAF1 ^@ http://purl.uniprot.org/uniprot/Q9M7N6 ^@ 10488241|||11972898|||16231153 ^@ BMC Genomics|||Plant Cell|||Planta ^@ Four signature motifs define the first class of structurally related large coiled-coil proteins in plants.|||MAF1, a novel plant protein interacting with matrix attachment region binding protein MFP1, is located at the nuclear envelope.|||The plant nuclear envelope protein MAF1 has an additional location at the Golgi and binds to a novel Golgi-associated coiled-coil protein. ^@ Brkljacic J.|||Gindullis F.|||Meier I.|||Patel S.|||Peffer N.J.|||Rose A.
http://togogenome.org/gene/4081:LyesC2p012 ^@ http://purl.uniprot.org/uniprot/A0A0C5CEG0|||http://purl.uniprot.org/uniprot/Q2MI45 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:sbt4a ^@ http://purl.uniprot.org/uniprot/O82006 ^@ 10350089 ^@ Plant Mol. Biol. ^@ Characterization of the subtilase gene family in tomato (Lycopersicon esculentum Mill.). ^@ Amrhein N.|||Meichtry J.|||Schaller A.
http://togogenome.org/gene/4081:RBR1 ^@ http://purl.uniprot.org/uniprot/H9E8V1 ^@ 25374451 ^@ Evol Bioinform Online|||Evol. Bioinform. Online ^@ Cloning and Expression Profiling of the Polycomb Gene, Retinoblastoma-related Protein from Tomato Solanum lycopersicum L. ^@ Almutairi Z.M.|||Sadder M.T.
http://togogenome.org/gene/4081:LyesC2p030 ^@ http://purl.uniprot.org/uniprot/A0A0C5CEE9|||http://purl.uniprot.org/uniprot/Q2MI61 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:cdkB2 ^@ http://purl.uniprot.org/uniprot/Q9FSH4 ^@ 11500540 ^@ Plant Physiol|||Plant Physiol. ^@ A new C-type cyclin-dependent kinase from tomato expressed in dividing tissues does not interact with mitotic and G1 cyclins. ^@ Chevalier C.|||Delmas F.|||Hernould M.|||Joubes J.|||Lemaire-Chamley M.|||Mouras A.|||Raymond P.|||Walter J.
http://togogenome.org/gene/4081:LOC101258589 ^@ http://purl.uniprot.org/uniprot/K4CPZ0 ^@ 26248665 ^@ J Exp Bot|||J. Exp. Bot. ^@ L-type lectin receptor kinases in Nicotiana benthamiana and tomato and their role in Phytophthora resistance. ^@ Bouwmeester K.|||Govers F.|||Wang Y.|||Weide R.
http://togogenome.org/gene/4081:CAB12 ^@ http://purl.uniprot.org/uniprot/Q7M1K8 ^@ 2013317 ^@ FEBS Lett|||FEBS Lett. ^@ Nucleotide sequence and chromosomal location of Cab11 and Cab12, the genes for the fourth polypeptide of the photosystem I light-harvesting antenna (LHCI). ^@ Aebersold R.|||Green B.R.|||McGrath J.M.|||Pichersky E.|||Schwartz E.|||Shen D.
http://togogenome.org/gene/4081:ARG2 ^@ http://purl.uniprot.org/uniprot/Q5UNS1 ^@ 15322128 ^@ J Biol Chem|||J. Biol. Chem. ^@ Regulation of plant arginase by wounding, jasmonate, and the phytotoxin coronatine. ^@ Chen H.|||He S.Y.|||Howe G.A.|||McCaig B.C.|||Melotto M.
http://togogenome.org/gene/4081:app2 ^@ http://purl.uniprot.org/uniprot/Q93X45 ^@ 11423553 ^@ J Biol Chem|||J. Biol. Chem. ^@ Cloning, expression, and characterization of tomato (Lycopersicon esculentum) aminopeptidase P. ^@ Hauser F.|||Haussner F.|||Schaller A.|||Strassner J.
http://togogenome.org/gene/4081:SlADH10A9 ^@ http://purl.uniprot.org/uniprot/Q56R04 ^@ 15842623|||23408433 ^@ J. Biol. Chem.|||Plant J. ^@ EDS1 in tomato is required for resistance mediated by TIR-class R genes and the receptor-like R gene Ve.|||Plant ALDH10 family: identifying critical residues for substrate specificity and trapping a thiohemiacetal intermediate. ^@ Aegerter B.J.|||Baker B.|||Handley V.|||Hu G.|||Hwang C.F.|||Koncitikova R.|||Kopecny D.|||Li Y.|||Morera S.|||Moskalikova H.|||Navarre R.|||Sebela M.|||Soural M.|||Tylichova M.|||Ustach C.|||Vigouroux A.|||Williamson V.M.|||deHart A.K.|||deHart A.K.A.
http://togogenome.org/gene/4081:LOC100736483 ^@ http://purl.uniprot.org/uniprot/G3KGB0 ^@ 21880077 ^@ Plant J|||Plant J. ^@ A tomato LysM receptor-like kinase promotes immunity and its kinase activity is inhibited by AvrPtoB. ^@ Martin G.B.|||Munkvold K.R.|||Velasquez A.C.|||Zeng L.|||Zhang J.
http://togogenome.org/gene/4081:LOC100134894 ^@ http://purl.uniprot.org/uniprot/A8DUB0 ^@ 18324417 ^@ Mol Genet Genomics|||Mol. Genet. Genomics ^@ Programmed cell death suppression in transformed plant tissue by tomato cDNAs identified from an Agrobacterium rhizogenes-based functional screen. ^@ Gilchrist D.G.|||Harvey J.J.|||Lincoln J.E.
http://togogenome.org/gene/4081:PR-P2 ^@ http://purl.uniprot.org/uniprot/P32045 ^@ 1804403 ^@ Mol. Plant Microbe Interact. ^@ Tobacco and tomato PR proteins homologous to win and pro-hevein lack the 'hevein' domain. ^@ Bol J.F.|||Brederode F.T.|||Dankash N.|||Linthorst H.J.M.|||de Wit P.J.G.M.|||van Kan J.A.L.
http://togogenome.org/gene/4081:CIP2a ^@ http://purl.uniprot.org/uniprot/Q2VY18 ^@ 16623906 ^@ Plant J|||Plant J. ^@ The CCAAT binding factor can mediate interactions between CONSTANS-like proteins and DNA. ^@ Ben-Naim O.|||Coupland G.|||Eshed R.|||Lifschitz E.|||Parnis A.|||Samach A.|||Shalit A.|||Teper-Bamnolker P.
http://togogenome.org/gene/4081:LOC101259570 ^@ http://purl.uniprot.org/uniprot/A0A3Q7HW81 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:pds ^@ http://purl.uniprot.org/uniprot/P28554|||http://purl.uniprot.org/uniprot/Q3S1N6 ^@ 1594600|||7991692|||8123786|||8485401 ^@ Plant Cell|||Plant Mol. Biol.|||Plant Physiol.|||Proc. Natl. Acad. Sci. U.S.A. ^@ A single polypeptide catalyzing the conversion of phytoene to zeta-carotene is transcriptionally regulated during tomato fruit ripening.|||Cloning and characterization of the gene for phytoene desaturase (Pds) from tomato (Lycopersicon esculentum).|||Regulation of carotenoid biosynthesis during tomato development.|||Sequence of the phytoene desaturase locus of tomato. ^@ Aracri B.|||Bartley G.E.|||Chamovitz D.|||Giuliano G.|||Hirschberg J.|||Mann V.|||Pecker I.|||Scolnik P.A.
http://togogenome.org/gene/4081:eIF-5A2 ^@ http://purl.uniprot.org/uniprot/Q9AXQ5 ^@ 11278418 ^@ J. Biol. Chem. ^@ Isolation and characterization of senescence-induced cDNAs encoding deoxyhypusine synthase and eucaryotic translation initiation factor 5A from tomato. ^@ Lu L.|||Thompson J.E.|||Wang D.|||Wang T.-W.
http://togogenome.org/gene/4081:LOC101254354 ^@ http://purl.uniprot.org/uniprot/K4B8G7 ^@ 24260152 ^@ PLoS ONE|||PLoS One ^@ Genome-wide identification and expression analysis of aquaporins in tomato. ^@ Akiyama M.|||Aoki K.|||Mori C.|||Reuscher S.|||Shibata D.|||Shiratake K.
http://togogenome.org/gene/4081:LOC101263520 ^@ http://purl.uniprot.org/uniprot/K4CUW3 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:CIP5 ^@ http://purl.uniprot.org/uniprot/Q2VY14 ^@ 16623906 ^@ Plant J|||Plant J. ^@ The CCAAT binding factor can mediate interactions between CONSTANS-like proteins and DNA. ^@ Ben-Naim O.|||Coupland G.|||Eshed R.|||Lifschitz E.|||Parnis A.|||Samach A.|||Shalit A.|||Teper-Bamnolker P.
http://togogenome.org/gene/4081:RNALE ^@ http://purl.uniprot.org/uniprot/P80022|||http://purl.uniprot.org/uniprot/Q6A3R1 ^@ 10801354|||14997395|||2040270|||7894013|||9188482 ^@ Eur. J. Biochem.|||J. Biol. Chem.|||J. Mol. Biol.|||Plant Mol. Biol.|||Planta ^@ Amino acid sequence of an extracellular, phosphate-starvation-induced ribonuclease from cultured tomato (Lycopersicon esculentum) cells.|||Crystal structure of a plant ribonuclease, RNase LE.|||Differential extraction and protein sequencing reveals major differences in patterns of primary cell wall proteins from plants.|||Phloem-specific expression of the wound-inducible ribonuclease LE from tomato (Lycopersicon esculentum cv. Lukullus).|||cDNA structure and regulatory properties of a family of starvation-induced ribonucleases from tomato. ^@ Abel S.|||Arai J.|||Bak M.|||Beintema J.J.|||Bolwell G.P.|||Gerrish C.|||Gilroy J.S.|||Glund K.|||Gross N.|||Hause G.|||Inokuchi N.|||Irie M.|||Jost W.|||Kock M.|||Koeck M.|||Koyama T.|||Loeffler A.|||Mitchell G.P.|||Nakamura K.T.|||Ohgi K.|||Robertson D.|||Slabas A.R.|||Stenzel I.|||Tanaka N.|||Terpstra P.
http://togogenome.org/gene/4081:TPS14 ^@ http://purl.uniprot.org/uniprot/G5CV54 ^@ 21813655|||21818683 ^@ Plant Mol. Biol.|||Plant Physiol. ^@ RNA-seq discovery, functional characterization, and comparison of sesquiterpene synthases from Solanum lycopersicum and Solanum habrochaites trichomes.|||The tomato terpene synthase gene family. ^@ Akhtar T.A.|||Bleeker P.M.|||Bohlmann J.|||Bonini M.E.|||De Both M.T.J.|||Diergaarde P.J.|||Falara V.|||Haring M.A.|||Last R.L.|||Matsuba Y.|||Nguyen T.T.|||Nguyen T.T.H.|||Pichersky E.|||Schauvinhold I.|||Schilmiller A.L.|||Schuurink R.C.|||Spyropoulou E.A.|||Volpin H.|||Zerbe P.
http://togogenome.org/gene/4081:LOC101256941 ^@ http://purl.uniprot.org/uniprot/P35057 ^@ 7764315 ^@ Planta ^@ The pattern of histone H4 expression in the tomato shoot apex changes during development. ^@ Brandstaedter J.U.|||Rossbach C.|||Thers K.
http://togogenome.org/gene/4081:LOC101247195 ^@ http://purl.uniprot.org/uniprot/P93208 ^@ 10198082 ^@ Plant Physiol. ^@ Fusicoccin, 14-3-3 proteins, and defense responses in tomato plants. ^@ Bowles D.J.|||Roberts M.R.
http://togogenome.org/gene/4081:HSC80 ^@ http://purl.uniprot.org/uniprot/P36181|||http://purl.uniprot.org/uniprot/Q53Z32 ^@ 14583611|||16653061 ^@ J Biol Chem|||J. Biol. Chem.|||Plant Physiol. ^@ Developmental expression of tomato heat-shock cognate protein 80.|||Molecular chaperone Hsp90 associates with resistance protein N and its signaling proteins SGT1 and Rar1 to modulate an innate immune response in plants. ^@ Burch-Smith T.|||Comai L.|||Dinesh-Kumar S.P.|||Feng S.|||Koning A.J.|||Liu Y.|||Rose R.|||Schiff M.
http://togogenome.org/gene/4081:SlTIP2-2 ^@ http://purl.uniprot.org/uniprot/H6V7A0 ^@ 24260152 ^@ PLoS ONE|||PLoS One ^@ Genome-wide identification and expression analysis of aquaporins in tomato. ^@ Akiyama M.|||Aoki K.|||Mori C.|||Reuscher S.|||Shibata D.|||Shiratake K.
http://togogenome.org/gene/4081:LOC101249712 ^@ http://purl.uniprot.org/uniprot/K4DF01 ^@ 21735233|||26716451|||26959229 ^@ PLoS Genet.|||Plant Cell Rep. ^@ AUXIN RESPONSE FACTOR 2 intersects hormonal signals in the regulation of tomato fruit ripening.|||Auxin response factor SlARF2 is an essential component of the regulatory mechanism controlling fruit ripening in tomato.|||Identification, isolation and expression analysis of auxin response factor (ARF) genes in Solanum lycopersicum. ^@ Aharoni A.|||Bouzayen M.|||Breitel D.|||Breitel D.A.|||Chappell-Maor L.|||Cheng L.|||Frasse P.|||Fu Y.|||Granell Richart A.|||Hao Y.|||Hu G.|||Kong F.|||Liu M.|||Liu S.|||Lu G.|||Meir S.|||Mila I.|||Panizel I.|||Peng Z.|||Puig C.P.|||Rogachev I.|||Wang F.|||Wu J.|||Yasuor H.|||Yifhar T.|||Yu X.|||Zouine M.
http://togogenome.org/gene/4081:tft10 ^@ http://purl.uniprot.org/uniprot/P93207 ^@ 10198082 ^@ Plant Physiol. ^@ Fusicoccin, 14-3-3 proteins, and defense responses in tomato plants. ^@ Bowles D.J.|||Roberts M.R.
http://togogenome.org/gene/4081:LyesC2p019 ^@ http://purl.uniprot.org/uniprot/A0A0C5C9W1|||http://purl.uniprot.org/uniprot/P36493 ^@ 16575560|||16830097|||25604480|||7514532 ^@ EMBO J.|||J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ A novel RNA gene in the tobacco plastid genome: its possible role in the maturation of 16S rRNA.|||Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Sugiura M.|||Tomkins J.|||Vera A.|||Wu Z.
http://togogenome.org/gene/4081:LOC101244582 ^@ http://purl.uniprot.org/uniprot/K4BWV2 ^@ 29760199 ^@ Plant Physiol. ^@ The NAC transcription factor SlNAP2 regulates leaf senescence and fruit yield in tomato. ^@ Balazadeh S.|||Fernie A.R.|||Ma X.|||Mueller-Roeber B.|||Tureckova V.|||Xue G.-P.|||Zhang Y.
http://togogenome.org/gene/4081:Cel1 ^@ http://purl.uniprot.org/uniprot/Q42871 ^@ 7994180 ^@ Plant Cell ^@ Two divergent endo-beta-1,4-glucanase genes exhibit overlapping expression in ripening fruit and abscising flowers. ^@ Bennett A.B.|||Gonzalez-Bosch C.|||Lashbrook C.C.
http://togogenome.org/gene/4081:LAPA1 ^@ http://purl.uniprot.org/uniprot/Q10712 ^@ 15231736|||24914976|||7647301|||8234334|||8824220 ^@ Acta Crystallogr. D|||Genes Dev.|||J. Biol. Chem.|||Plant Mol. Biol.|||Proc. Natl. Acad. Sci. U.S.A. ^@ Conserved MYC transcription factors play a key role in jasmonate signaling both in tomato and Arabidopsis.|||Leucine aminopeptidase: an inducible component of the defense response in Lycopersicon esculentum (tomato).|||Localization and post-translational processing of the wound-induced leucine aminopeptidase proteins of tomato.|||Nature and regulation of pistil-expressed genes in tomato.|||Structure of tomato wound-induced leucine aminopeptidase sheds light on substrate specificity. ^@ Abdeen A.|||Boter M.|||Chao W.S.|||Duprez K.|||Fan L.|||Gasser C.S.|||Gu Y.Q.|||Holzer F.M.|||Milligan S.B.|||Pautot V.|||Prat S.|||Reisch B.|||Ruiz-Rivero O.|||Scranton M.A.|||Walling L.L.
http://togogenome.org/gene/4081:LOC101251371 ^@ http://purl.uniprot.org/uniprot/A0A1W5YR73 ^@ 28389586 ^@ Plant Cell ^@ Coordination of Meristem Doming and the Floral Transition by Late Termination, a Kelch Repeat Protein. ^@ Eshed Y.|||Friedlander G.|||Gilad S.|||Gilboa N.S.|||Segal Gilboa N.|||Tal L.|||Unger T.
http://togogenome.org/gene/4081:LyesC2p082 ^@ http://purl.uniprot.org/uniprot/A0A0C5C9Q2|||http://purl.uniprot.org/uniprot/Q2MIB3 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LOC778198 ^@ http://purl.uniprot.org/uniprot/Q9AR34 ^@ 11283350 ^@ Plant Cell ^@ Comparative sequence analysis reveals extensive microcolinearity in the lateral suppressor regions of the tomato, Arabidopsis, and Capsella genomes. ^@ Acarkan A.|||Herrero R.|||Rossberg M.|||Schmidt R.|||Schmitt T.|||Schmitz G.|||Schumacher K.|||Theres K.
http://togogenome.org/gene/4081:LOC101245136 ^@ http://purl.uniprot.org/uniprot/Q43522 ^@ 9049262 ^@ Plant Mol Biol|||Plant Mol. Biol. ^@ Developmental and transgenic analysis of two tomato fruit enhanced genes. ^@ Conner T.W.|||Santino C.G.|||Stanford G.L.
http://togogenome.org/gene/4081:LyesC2p028 ^@ http://purl.uniprot.org/uniprot/A0A0U1ZGZ4|||http://purl.uniprot.org/uniprot/Q2MI59 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:PR-5 ^@ http://purl.uniprot.org/uniprot/Q8LPU1 ^@ 12376655 ^@ Plant Physiol|||Plant Physiol. ^@ Mass spectrometric identification of isoforms of PR proteins in xylem sap of fungus-infected tomato. ^@ Back J.W.|||Cornelissen B.J.|||Dekker H.L.|||Houterman P.M.|||Rep M.|||Speijer D.|||Vossen J.H.|||de Boer A.D.|||de Koster C.G.
http://togogenome.org/gene/4081:LyesC2p043 ^@ http://purl.uniprot.org/uniprot/Q2MI74 ^@ 16575560|||16830097 ^@ J. Mol. Evol.|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.
http://togogenome.org/gene/4081:TMP ^@ http://purl.uniprot.org/uniprot/Q9SPA0 ^@ 11550900 ^@ Genome ^@ Antisense inhibition of a tomato meiotic proteinase suggests functional redundancy of proteinases during microsporogenesis. ^@ Deguzman R.|||Riggs C.D.|||Rzepczyk A.|||Taylor A.A.|||Zeman K.
http://togogenome.org/gene/4081:SYMRK ^@ http://purl.uniprot.org/uniprot/Q2TDW9 ^@ 18318603 ^@ PLoS Biol|||PLoS Biol. ^@ Functional adaptation of a plant receptor-kinase paved the way for the evolution of intracellular root symbioses with bacteria. ^@ Giczey G.|||Markmann K.|||Parniske M.
http://togogenome.org/gene/4081:L23 ^@ http://purl.uniprot.org/uniprot/K4CUW3 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:NXD1 ^@ http://purl.uniprot.org/uniprot/K4DEY3 ^@ 24506237 ^@ Plant J. ^@ The tomato mutation nxd1 reveals a gene necessary for neoxanthin biosynthesis and demonstrates that violaxanthin is a sufficient precursor for abscisic acid biosynthesis. ^@ Cunningham F.X. Jr.|||Galpaz N.|||Hirschberg J.|||Neuman H.|||Zamir D.
http://togogenome.org/gene/4081:FZY6 ^@ http://purl.uniprot.org/uniprot/D2IGV5 ^@ 21435892 ^@ Plant Physiol Biochem|||Plant Physiol. Biochem. ^@ Gene structure and spatiotemporal expression profile of tomato genes encoding YUCCA-like flavin monooxygenases: The ToFZY gene family.|||Gene structure and spatiotemporal expression profile of tomato genes encoding YUCCA-like flavin monooxygenases: the ToFZY gene family. ^@ Borges A.A.|||Borges-Perez A.|||Exposito-Rodriguez M.|||Perez J.A.
http://togogenome.org/gene/4081:Bti9 ^@ http://purl.uniprot.org/uniprot/E2FYC4 ^@ 21880077 ^@ Plant J|||Plant J. ^@ A tomato LysM receptor-like kinase promotes immunity and its kinase activity is inhibited by AvrPtoB. ^@ Martin G.B.|||Munkvold K.R.|||Velasquez A.C.|||Zeng L.|||Zhang J.
http://togogenome.org/gene/4081:ARF9 ^@ http://purl.uniprot.org/uniprot/D7R605 ^@ 21735233 ^@ Plant Cell Rep. ^@ Identification, isolation and expression analysis of auxin response factor (ARF) genes in Solanum lycopersicum. ^@ Cheng L.|||Kong F.|||Liu S.|||Lu G.|||Peng Z.|||Wang F.|||Wu J.|||Yu X.
http://togogenome.org/gene/4081:Bs4 ^@ http://purl.uniprot.org/uniprot/Q6T3R3 ^@ 14675431 ^@ Plant J|||Plant J. ^@ The tomato resistance protein Bs4 is a predicted non-nuclear TIR-NB-LRR protein that mediates defense responses to severely truncated derivatives of AvrBs4 and overexpressed AvrBs3. ^@ Baker B.|||Ballvora A.|||Baulcombe D.|||Bonas U.|||Ganal M.|||Gurlebeck D.|||Lahaye T.|||Peart J.|||Schornack S.
http://togogenome.org/gene/4081:LOC100527965 ^@ http://purl.uniprot.org/uniprot/E5KGD0 ^@ 22211518 ^@ Plant J|||Plant J. ^@ Evaluating auxin distribution in tomato (Solanum lycopersicum) through an analysis of the PIN and AUX/LAX gene families. ^@ Catala C.|||Pattison R.J.
http://togogenome.org/gene/4081:LOC101248825 ^@ http://purl.uniprot.org/uniprot/K4B4Z0 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:pmt ^@ http://purl.uniprot.org/uniprot/Q2KTH4 ^@ 17221359 ^@ Plant Mol Biol|||Plant Mol. Biol. ^@ Putrescine N-methyltransferases--a structure-function analysis. ^@ Azemi M.E.|||Brandt W.|||Drager B.|||Meier A.C.|||Namjoyan F.|||Teuber M.|||Wodak A.
http://togogenome.org/gene/4081:SEND33 ^@ http://purl.uniprot.org/uniprot/Q43517 ^@ 9132056 ^@ Plant Mol. Biol. ^@ Cloning and characterization of tomato leaf senescence-related cDNAs. ^@ Cooper W.|||Drake R.|||Farrell A.|||Grierson D.|||Hackett R.|||John I.
http://togogenome.org/gene/4081:LOC543710 ^@ http://purl.uniprot.org/uniprot/Q84ZX6 ^@ 12559580 ^@ Gene ^@ Sucrose-phosphatase gene families in plants. ^@ Lunn J.E.
http://togogenome.org/gene/4081:Ve2 ^@ http://purl.uniprot.org/uniprot/Q93V91 ^@ 11331751 ^@ Proc Natl Acad Sci U S A|||Proc. Natl. Acad. Sci. U.S.A. ^@ Tomato Ve disease resistance genes encode cell surface-like receptors. ^@ Byers R.|||Fischer R.|||Hachey J.|||Howard R.J.|||Kawchuk L.M.|||Kokko E.|||Kulcsar F.|||Lynch D.R.|||Prufer D.|||Robertson A.|||Waterer D.R.|||van Rooijen G.
http://togogenome.org/gene/4081:MAPK5 ^@ http://purl.uniprot.org/uniprot/D7R517 ^@ 22306326 ^@ Gene ^@ Genome-wide analysis of the mitogen-activated protein kinase gene family in Solanum lycopersicum. ^@ Cheng L.|||Kong F.|||Liu S.|||Lu G.|||Peng Z.|||Wang J.|||Wu J.
http://togogenome.org/gene/4081:LOC101263173 ^@ http://purl.uniprot.org/uniprot/I6ZAC9 ^@ 22623517 ^@ Plant Physiol|||Plant Physiol. ^@ Altered Chloroplast Development and Delayed Fruit Ripening Caused by Mutations in a Zinc Metalloprotease at the lutescent2 Locus of Tomato.|||Altered chloroplast development and delayed fruit ripening caused by mutations in a zinc metalloprotease at the lutescent2 locus of tomato. ^@ Aldridge G.M.|||Barry C.S.|||Giovannoni J.J.|||Herzog G.|||Hirschberg J.|||Ma Q.|||McQuinn R.P.
http://togogenome.org/gene/4081:LyesC2p002 ^@ http://purl.uniprot.org/uniprot/A0A0U1ZGZ4|||http://purl.uniprot.org/uniprot/Q2MI59 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LOC100736479 ^@ http://purl.uniprot.org/uniprot/F8SS65 ^@ 22211518 ^@ Plant J|||Plant J. ^@ Evaluating auxin distribution in tomato (Solanum lycopersicum) through an analysis of the PIN and AUX/LAX gene families. ^@ Catala C.|||Pattison R.J.
http://togogenome.org/gene/4081:LyesC2p051 ^@ http://purl.uniprot.org/uniprot/A0A0C5CHF2|||http://purl.uniprot.org/uniprot/Q2MI82 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LOC101255652 ^@ http://purl.uniprot.org/uniprot/Q7M222 ^@ 8804387 ^@ Mol Gen Genet|||Mol. Gen. Genet. ^@ Expression of genes for a defensin and a proteinase inhibitor in specific areas of the shoot apex and the developing flower in tomato. ^@ Brandstadter J.|||Rossbach C.|||Theres K.
http://togogenome.org/gene/4081:CCD7 ^@ http://purl.uniprot.org/uniprot/D0UDC1 ^@ 19845881 ^@ Plant J|||Plant J. ^@ SlCCD7 controls strigolactone biosynthesis, shoot branching and mycorrhiza-induced apocarotenoid formation in tomato. ^@ Bouwmeester H.J.|||Charnikhova T.|||Fernie A.R.|||Giavalisco P.|||Goulet C.|||Klee H.J.|||Kohlen W.|||Lytovchenko A.|||Simkin A.J.|||Strack D.|||Vogel J.T.|||Walter M.H.
http://togogenome.org/gene/4081:ELIP ^@ http://purl.uniprot.org/uniprot/Q6QDC5 ^@ 15475376 ^@ J Exp Bot|||J. Exp. Bot. ^@ The early light-inducible protein (ELIP) gene is expressed during the chloroplast-to-chromoplast transition in ripening tomato fruit. ^@ Bruno A.K.|||Wetzel C.M.
http://togogenome.org/gene/4081:ProT3 ^@ http://purl.uniprot.org/uniprot/Q9XE50 ^@ 10072398 ^@ Plant Cell ^@ LeProT1, a transporter for proline, glycine betaine, and gamma-amino butyric acid in tomato pollen. ^@ Breitkreuz K.E.|||Frommer W.B.|||Grallath S.|||Rentsch D.|||Schwacke R.|||Stransky E.|||Stransky H.
http://togogenome.org/gene/4081:SFT ^@ http://purl.uniprot.org/uniprot/Q84XL0 ^@ 14682620 ^@ Plant Mol Biol|||Plant Mol. Biol. ^@ The SELF-PRUNING gene family in tomato. ^@ Carmel-Goren L.|||Lifschitz E.|||Liu Y.S.|||Zamir D.
http://togogenome.org/gene/4081:LOC101249293 ^@ http://purl.uniprot.org/uniprot/K4ATC2 ^@ 28817560 ^@ PLoS Genet|||PLoS Genet. ^@ Fruit weight is controlled by Cell Size Regulator encoding a novel protein that is expressed in maturing tomato fruits. ^@ Chakrabarti M.|||Huang Z.|||Illa-Berenguer E.|||Liu X.|||Mu Q.|||Ramos A.|||Wang Y.|||van der Knaap E.
http://togogenome.org/gene/4081:TPS38 ^@ http://purl.uniprot.org/uniprot/G5CV40 ^@ 21813655 ^@ Plant Physiol. ^@ The tomato terpene synthase gene family. ^@ Akhtar T.A.|||Bleeker P.M.|||Bonini M.E.|||Falara V.|||Last R.L.|||Matsuba Y.|||Nguyen T.T.|||Nguyen T.T.H.|||Pichersky E.|||Schauvinhold I.|||Schilmiller A.L.|||Schuurink R.C.|||Spyropoulou E.A.
http://togogenome.org/gene/4081:CYP97C11 ^@ http://purl.uniprot.org/uniprot/D2CV78 ^@ 21450689 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ Characterization of P450 Carotenoid {beta}- and {varepsilon}-Hydroxylases of Tomato and Transcriptional Regulation of Xanthophyll Biosynthesis in Root, Leaf, Petal and Fruit.|||Characterization of P450 carotenoid beta- and epsilon-hydroxylases of tomato and transcriptional regulation of xanthophyll biosynthesis in root, leaf, petal and fruit. ^@ D'Ambrosio C.|||Giorio G.|||Stigliani A.L.
http://togogenome.org/gene/4081:P69B ^@ http://purl.uniprot.org/uniprot/O04678 ^@ 9162080|||9891003 ^@ J Biol Chem|||J. Biol. Chem. ^@ A genomic cluster containing four differentially regulated subtilisin-like processing protease genes is in tomato plants.|||Identification of a new pathogen-induced member of the subtilisin-like processing protease family from plants. ^@ Coego A.|||Conejero V.|||Jorda L.|||Tornero P.|||Vera P.
http://togogenome.org/gene/4081:LOC104648652 ^@ http://purl.uniprot.org/uniprot/A0A3Q7IGB1 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:SBT2 ^@ http://purl.uniprot.org/uniprot/P93205 ^@ 10350089|||10671566 ^@ J Biol Chem|||J. Biol. Chem.|||Plant Mol. Biol. ^@ Characterization of the subtilase gene family in tomato (Lycopersicon esculentum Mill.).|||LeSBT1, a subtilase from tomato plants. Overexpression in insect cells, purification, and characterization. ^@ Amrhein N.|||Janzik I.|||Macheroux P.|||Meichtry J.|||Schaller A.
http://togogenome.org/gene/4081:Acx1A ^@ http://purl.uniprot.org/uniprot/Q5D8D3 ^@ 15722469|||16699197 ^@ Acta Crystallogr D Biol Crystallogr|||Acta Crystallogr. D|||Plant Cell ^@ Role of beta-oxidation in jasmonate biosynthesis and systemic wound signaling in tomato.|||Structure determination and analysis of acyl-CoA oxidase (ACX1) from tomato. ^@ Garavito R.M.|||Giovannoni J.J.|||Howe G.A.|||Jayanty S.|||Kobayashi Y.|||Lee G.I.|||Li C.|||Liu G.|||Powers R.A.|||Rife C.L.|||Sageman C.|||Schilmiller A.L.|||Vrebalov J.|||Yagi K.
http://togogenome.org/gene/4081:sbt4b ^@ http://purl.uniprot.org/uniprot/Q9ZS44 ^@ 10350089 ^@ Plant Mol. Biol. ^@ Characterization of the subtilase gene family in tomato (Lycopersicon esculentum Mill.). ^@ Amrhein N.|||Meichtry J.|||Schaller A.
http://togogenome.org/gene/4081:LOC101251485 ^@ http://purl.uniprot.org/uniprot/A0A7S9KJJ1 ^@ 33206370 ^@ New|||New Phytol ^@ The root-knot nematode effector MiEFF18 interacts with the plant core spliceosomal protein SmD1 required for giant cell formation. ^@ Abad P.|||Bazin J.|||Bouteiller N.|||Chen Y.|||Crespi M.D.|||Favery B.|||Marteu N.|||Mejias J.|||Quentin M.|||Sawa S.|||Truong N.M.|||Vaucheret H.
http://togogenome.org/gene/4081:h52 ^@ http://purl.uniprot.org/uniprot/Q9LWB0 ^@ 10652131 ^@ Plant J|||Plant J. ^@ A tomato homeobox gene (HD-zip) is involved in limiting the spread of programmed cell death. ^@ Conejero V.|||Mayda E.|||Tornero P.|||Vera P.
http://togogenome.org/gene/4081:MTSHP ^@ http://purl.uniprot.org/uniprot/O80432 ^@ 10682350 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ Characterization of mitochondria-located small heat shock protein from tomato (Lycopersicon esculentum). ^@ Liu J.|||Shono M.
http://togogenome.org/gene/4081:AgpL1 ^@ http://purl.uniprot.org/uniprot/O04924|||http://purl.uniprot.org/uniprot/Q15I66 ^@ 16770584|||9469935 ^@ Gene|||Planta ^@ Molecular cloning and organ-specific expression of three isoforms of tomato ADP-glucose pyrophosphorylase gene.|||Temporally extended gene expression of the ADP-Glc pyrophosphorylase large subunit (AgpL1) leads to increased enzyme activity in developing tomato fruit. ^@ Bar M.|||Chung W.I.|||Levin I.|||Park S.W.|||Petreikov M.|||Schaffer A.A.|||Shen S.|||Yeselson Y.
http://togogenome.org/gene/4081:ZEP ^@ http://purl.uniprot.org/uniprot/A5JV19 ^@ 18275469 ^@ Physiol Plant|||Physiol. Plantarum ^@ Overexpression of zeaxanthin epoxidase gene enhances the sensitivity of tomato PSII photoinhibition to high light and chilling stress. ^@ Fang W.|||Han H.|||Li B.|||Meng Q.W.|||Sui N.|||Wang N.
http://togogenome.org/gene/4081:LOC101055610 ^@ http://purl.uniprot.org/uniprot/H8ZRY4 ^@ 22330838 ^@ BMC Plant Biol|||BMC Plant Biol. ^@ Characterization of a calcium/calmodulin-regulated SR/CAMTA gene family during tomato fruit development and ripening. ^@ Conway W.S.|||Peng H.|||Whitaker B.D.|||Yang T.
http://togogenome.org/gene/4081:DIG3 ^@ http://purl.uniprot.org/uniprot/Q6QLU0 ^@ 15047887 ^@ Proc Natl Acad Sci U S A|||Proc. Natl. Acad. Sci. U.S.A. ^@ Expression of plant protein phosphatase 2C interferes with nuclear import of the Agrobacterium T-complex protein VirD2. ^@ Bhattacharjee S.|||Gelvin S.B.|||Rao P.K.|||Tao Y.
http://togogenome.org/gene/4081:cpk1 ^@ http://purl.uniprot.org/uniprot/Q8RW36 ^@ 12011347 ^@ Plant Physiol|||Plant Physiol. ^@ LeCPK1, a calcium-dependent protein kinase from tomato. Plasma membrane targeting and biochemical characterization. ^@ Oecking C.|||Piotrowski M.|||Rutschmann F.|||Schaller A.|||Stalder U.
http://togogenome.org/gene/4081:LOC101259713 ^@ http://purl.uniprot.org/uniprot/K4CG62 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:LyesC2p061 ^@ http://purl.uniprot.org/uniprot/A0A0C5CHE6|||http://purl.uniprot.org/uniprot/P27065 ^@ 16575560|||16668742|||16830097|||25604480|||28164333 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||New Phytol|||New Phytol.|||Plant Physiol.|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Posttranslational modifications in the amino-terminal region of the large subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase from several plant species.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus.|||Weak coordination between leaf structure and function among closely related tomato species. ^@ Aspinall S.|||Bock R.|||Conesa M.A.|||Daniell H.|||Galmes J.|||Gray J.C.|||Grevich J.|||Guda C.|||Houtz R.L.|||Jansen R.K.|||Jones S.B.|||Kahlau S.|||Lee S.-B.|||Molins A.|||Muir C.D.|||Poneleit L.|||Quesada-Vargas T.|||Roldan E.J.|||Royer M.|||Saski C.|||Stults J.T.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LOC101254570 ^@ http://purl.uniprot.org/uniprot/A0A060PWE2 ^@ 24833026 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ The sugar transporter inventory of tomato: genome-wide identification and expression analysis. ^@ Akiyama M.|||Aoki K.|||Koh A.|||Makino H.|||Reuscher S.|||Shibata D.|||Shiratake K.|||Yasuda T.
http://togogenome.org/gene/4081:LeSPL-CNR ^@ http://purl.uniprot.org/uniprot/Q0PY35 ^@ 16832354 ^@ Nat Genet|||Nat. Genet. ^@ A naturally occurring epigenetic mutation in a gene encoding an SBP-box transcription factor inhibits tomato fruit ripening. ^@ Giovannoni J.J.|||Hong Y.|||King G.J.|||Manning K.|||Poole M.|||Seymour G.B.|||Thompson A.J.|||Tor M.
http://togogenome.org/gene/4081:FALSIFLORA ^@ http://purl.uniprot.org/uniprot/Q9LDP5 ^@ 10652140 ^@ Plant J|||Plant J. ^@ FALSIFLORA, the tomato orthologue of FLORICAULA and LEAFY, controls flowering time and floral meristem identity. ^@ Capel J.|||Gomez P.|||Jamilena M.|||Lozano R.|||Molinero-Rosales N.|||Zurita S.
http://togogenome.org/gene/4081:ARF2 ^@ http://purl.uniprot.org/uniprot/Q2LAJ3 ^@ 21735233|||26716451|||26959229|||27645097|||28167023 ^@ PLoS Genet.|||Plant Cell Rep.|||Plant Sci.|||Sci. Rep. ^@ AUXIN RESPONSE FACTOR 2 intersects hormonal signals in the regulation of tomato fruit ripening.|||Auxin response factor SlARF2 is an essential component of the regulatory mechanism controlling fruit ripening in tomato.|||Identification, isolation and expression analysis of auxin response factor (ARF) genes in Solanum lycopersicum.|||SlARF2a plays a negative role in mediating axillary shoot formation.|||The Solanum lycopersicum auxin response factor SlARF2 participates in regulating lateral root formation and flower organ senescence. ^@ Aharoni A.|||Bouzayen M.|||Breitel D.|||Breitel D.A.|||Chappell-Maor L.|||Cheng L.|||Dong X.|||Frasse P.|||Fu Y.|||Granell Richart A.|||Gu W.|||Guan X.|||Hao Y.|||Hu G.|||Jiang Y.|||Kong F.|||Li T.|||Liu M.|||Liu R.|||Liu S.|||Liu X.|||Lu G.|||Meir S.|||Mila I.|||Panizel I.|||Peng Z.|||Puig C.P.|||Qi M.|||Ren Z.|||Rogachev I.|||Shi Z.|||Wang F.|||Wang R.|||Wang Y.|||Wu J.|||Xu T.|||Yasuor H.|||Yifhar T.|||Yu X.|||Zouine M.
http://togogenome.org/gene/4081:LOC778319 ^@ http://purl.uniprot.org/uniprot/Q53U38 ^@ 20350329|||35643637 ^@ BMC Genomics|||Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome.|||Large-scale analysis of full-length cDNAs from the tomato (Solanum lycopersicum) cultivar Micro-Tom, a reference system for the Solanaceae genomics. ^@ Amunts A.|||Aoki K.|||Arie T.|||Cottilli P.|||Egusa M.|||Ezura H.|||Fukushima S.|||Ichinose Y.|||Itoh Y.|||Kawamura S.|||Kikuchi M.|||Kodama M.|||Kohara Y.|||Kurabayashi A.|||Lison P.|||Narita T.|||Nobe Y.|||Okabe A.|||Omura T.|||Ooga K.|||Petrov A.S.|||Sakurai N.|||Sato Y.|||Satoh S.|||Shibata D.|||Shin-I T.|||Shin-i T.|||Suda K.|||Suzuki A.|||Suzuki T.|||Takahashi H.|||Taoka M.|||Torii M.|||Tsugane T.|||Watanabe M.|||Watanabe Y.|||Yamamoto N.|||Yano K.|||Yazawa K.
http://togogenome.org/gene/4081:PPCK1 ^@ http://purl.uniprot.org/uniprot/Q9SDX9 ^@ 10571893 ^@ Plant J. ^@ Phosphoenolpyruvate carboxylase kinase is a novel protein kinase regulated at the level of expression. ^@ Gill A.|||Hartwell J.|||Jenkins G.I.|||Nimmo G.A.|||Nimmo H.G.|||Wilkins M.B.
http://togogenome.org/gene/4081:TAPG2 ^@ http://purl.uniprot.org/uniprot/Q96487 ^@ 9112778|||9669329 ^@ Mol Gen Genet|||Mol. Gen. Genet.|||Plant Physiol|||Plant Physiol. ^@ Genomic organization of six tomato polygalacturonases and 5' upstream sequence identity with tap1 and win2 genes.|||Three different polygalacturonases are expressed in tomato leaf and flower abscission, each with a different temporal expression pattern. ^@ Hong S.B.|||Kalaitzis P.|||Solomos T.|||Tucker M.L.
http://togogenome.org/gene/4081:TAPG4 ^@ http://purl.uniprot.org/uniprot/O22312|||http://purl.uniprot.org/uniprot/Q96488 ^@ 9112778|||9669329 ^@ Mol Gen Genet|||Mol. Gen. Genet.|||Plant Physiol|||Plant Physiol. ^@ Genomic organization of six tomato polygalacturonases and 5' upstream sequence identity with tap1 and win2 genes.|||Three different polygalacturonases are expressed in tomato leaf and flower abscission, each with a different temporal expression pattern. ^@ Hong S.B.|||Kalaitzis P.|||Solomos T.|||Tucker M.L.
http://togogenome.org/gene/4081:AADC1A ^@ http://purl.uniprot.org/uniprot/Q1KSC6 ^@ 16698923 ^@ Proc Natl Acad Sci U S A|||Proc. Natl. Acad. Sci. U.S.A. ^@ Tomato aromatic amino acid decarboxylases participate in synthesis of the flavor volatiles 2-phenylethanol and 2-phenylacetaldehyde. ^@ Fernie A.R.|||Hanson A.D.|||Klee H.J.|||Schauer N.|||Taylor M.|||Tieman D.
http://togogenome.org/gene/4081:LOC101252796 ^@ http://purl.uniprot.org/uniprot/K4CJ56 ^@ 25986128 ^@ Plant Physiol|||Plant Physiol. ^@ A Feedback-Insensitive Isopropylmalate Synthase Affects Acylsugar Composition in Cultivated and Wild Tomato. ^@ Adams C.|||Jones A.D.|||Kim J.|||Last R.L.|||Leong B.|||Moghe G.D.|||Ning J.|||Ofner I.|||Wang Z.|||Zamir D.
http://togogenome.org/gene/4081:LOC543718 ^@ http://purl.uniprot.org/uniprot/Q8LKF6 ^@ 12207015 ^@ J. Biol. Chem. ^@ Cloning and characterization of mitochondrial 5-formyltetrahydrofolate cycloligase from higher plants. ^@ Hanson A.D.|||Janave M.T.|||Roje S.|||Ziemak M.J.
http://togogenome.org/gene/4081:LOG7 ^@ http://purl.uniprot.org/uniprot/I0IUQ3 ^@ 22865911 ^@ J Exp Bot|||J. Exp. Bot. ^@ Roles and regulation of cytokinins in tomato fruit development. ^@ Fukuda M.|||Honda I.|||Imanishi S.|||Kikuchi K.|||Matsuo S.
http://togogenome.org/gene/4081:LOC101055570 ^@ http://purl.uniprot.org/uniprot/H8ZRY6 ^@ 22330838 ^@ BMC Plant Biol|||BMC Plant Biol. ^@ Characterization of a calcium/calmodulin-regulated SR/CAMTA gene family during tomato fruit development and ripening. ^@ Conway W.S.|||Peng H.|||Whitaker B.D.|||Yang T.
http://togogenome.org/gene/4081:LecRK-IV ^@ http://purl.uniprot.org/uniprot/K4CRM5 ^@ 26248665 ^@ J Exp Bot|||J. Exp. Bot. ^@ L-type lectin receptor kinases in Nicotiana benthamiana and tomato and their role in Phytophthora resistance. ^@ Bouwmeester K.|||Govers F.|||Wang Y.|||Weide R.
http://togogenome.org/gene/4081:GA2ox2 ^@ http://purl.uniprot.org/uniprot/A0FK57 ^@ 17676476 ^@ DNA Seq|||DNA Seq. ^@ Isolation and expression of GA 2-oxidase2 in tomato. ^@ Chen R.G.|||Li H.X.|||Wang T.T.|||Xiao J.H.|||Ye Z.B.|||Zhang J.H.|||Zhang Y.Y.
http://togogenome.org/gene/4081:LOC778265 ^@ http://purl.uniprot.org/uniprot/Q1HTV3 ^@ 16682641 ^@ Proc Natl Acad Sci U S A|||Proc. Natl. Acad. Sci. U.S.A. ^@ Ripening in the tomato Green-ripe mutant is inhibited by ectopic expression of a protein that disrupts ethylene signaling. ^@ Barry C.S.|||Giovannoni J.J.
http://togogenome.org/gene/4081:LOC101264811 ^@ http://purl.uniprot.org/uniprot/A0A3Q7FNQ5 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:LOC101257121 ^@ http://purl.uniprot.org/uniprot/A0A3Q7IJQ0 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:CHI9 ^@ http://purl.uniprot.org/uniprot/Q05538 ^@ 8400122|||9188482 ^@ J. Biol. Chem.|||Plant Mol. Biol. ^@ Differential extraction and protein sequencing reveals major differences in patterns of primary cell wall proteins from plants.|||Molecular characterization of four chitinase cDNAs obtained from Cladosporium fulvum-infected tomato. ^@ Bolwell G.P.|||Danhash N.|||Gerrish C.|||Gilroy J.S.|||Mitchell G.P.|||Robertson D.|||Slabas A.R.|||Wagemakers C.A.M.|||de Wit P.J.G.M.|||van Kan J.A.L.
http://togogenome.org/gene/4081:HY5 ^@ http://purl.uniprot.org/uniprot/Q9SM50 ^@ 15178762 ^@ Proc. Natl. Acad. Sci. U.S.A. ^@ Manipulation of light signal transduction as a means of modifying fruit nutritional quality in tomato. ^@ Barry C.|||Bowler C.|||Giovannoni J.|||Liu Y.|||Roof S.|||Vrebalov J.|||Ye Z.|||van Tuinen A.
http://togogenome.org/gene/4081:LOC101247080 ^@ http://purl.uniprot.org/uniprot/A0A1W5P464 ^@ 28389586 ^@ Plant Cell ^@ Coordination of Meristem Doming and the Floral Transition by Late Termination, a Kelch Repeat Protein. ^@ Eshed Y.|||Friedlander G.|||Gilad S.|||Gilboa N.S.|||Segal Gilboa N.|||Tal L.|||Unger T.
http://togogenome.org/gene/4081:sumo ^@ http://purl.uniprot.org/uniprot/Q9SMD1 ^@ 27425412 ^@ Mol Cell|||Mol. Cell ^@ The Molecular Basis for Ubiquitin and Ubiquitin-like Specificities in Bacterial Effector Proteases. ^@ Durkin C.H.|||Geurink P.P.|||Holden D.W.|||Komander D.|||Ovaa H.|||Pruneda J.N.|||Santhanam B.
http://togogenome.org/gene/4081:DCL1 ^@ http://purl.uniprot.org/uniprot/V5JFA1 ^@ 24376253 ^@ J Exp Bot|||J. Exp. Bot. ^@ Global and local perturbation of the tomato microRNA pathway by a trans-activated DICER-LIKE 1 mutant. ^@ Arazi T.|||Damodharan S.|||Isaacson T.|||Kravchik M.|||Stav R.|||Sunkar R.|||Zohar M.
http://togogenome.org/gene/4081:EIL3 ^@ http://purl.uniprot.org/uniprot/Q94FV2 ^@ 11359609 ^@ Plant J|||Plant J. ^@ Members of the tomato LeEIL (EIN3-like) gene family are functionally redundant and regulate ethylene responses throughout plant development. ^@ Ciardi J.A.|||Klee H.J.|||Taylor M.G.|||Tieman D.M.
http://togogenome.org/gene/4081:LOC101253514 ^@ http://purl.uniprot.org/uniprot/K4CPC4 ^@ 27909045 ^@ Plant Physiol|||Plant Physiol. ^@ A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity. ^@ Chen X.|||Connor R.A.|||Gough J.|||Martin G.B.|||Mural R.V.|||Oates M.E.|||Zeng L.|||Zhou B.
http://togogenome.org/gene/4081:LOC543825 ^@ http://purl.uniprot.org/uniprot/Q84V46 ^@ 14507436 ^@ Biochim Biophys Acta|||Biochim. Biophys. Acta ^@ A tomato alternative oxidase protein with altered regulatory properties. ^@ Castelli J.|||Day D.A.|||Finnegan P.M.|||Holtzapffel R.C.|||Millar A.H.|||Whelan J.
http://togogenome.org/gene/4081:IMP1 ^@ http://purl.uniprot.org/uniprot/P54926 ^@ 14729261|||8718627 ^@ Gene|||Plant Cell ^@ Genomic organization and regulation of the LeIMP-1 and LeIMP-2 genes encoding myo-inositol monophosphatase in tomato.|||Plant inositol monophosphatase is a lithium-sensitive enzyme encoded by a multigene family. ^@ Gillaspy G.E.|||Gruissem W.|||Keddie J.|||Keddie J.S.|||Oda K.|||Spence J.|||Styer J.C.
http://togogenome.org/gene/4081:tft9 ^@ http://purl.uniprot.org/uniprot/P93214 ^@ 10198082 ^@ Plant Physiol. ^@ Fusicoccin, 14-3-3 proteins, and defense responses in tomato plants. ^@ Bowles D.J.|||Roberts M.R.
http://togogenome.org/gene/4081:AT2 ^@ http://purl.uniprot.org/uniprot/I6SJM2 ^@ 22988115 ^@ Proc Natl Acad Sci U S A|||Proc. Natl. Acad. Sci. U.S.A. ^@ Identification of a BAHD acetyltransferase that produces protective acyl sugars in tomato trichomes. ^@ Charbonneau A.L.|||Last R.L.|||Schilmiller A.L.
http://togogenome.org/gene/4081:ptpkis1 ^@ http://purl.uniprot.org/uniprot/Q93X44 ^@ 12148529 ^@ Plant J. ^@ A novel higher plant protein tyrosine phosphatase interacts with SNF1-related protein kinases via a KIS (kinase interaction sequence) domain. ^@ Chilley P.|||Dahm C.C.|||Fenton T.R.|||Fordham-Skelton A.P.|||Gatehouse J.A.|||Lumbreras V.|||Pages M.|||Reignoux S.
http://togogenome.org/gene/4081:TPS16 ^@ http://purl.uniprot.org/uniprot/G8H5N3 ^@ 21813655|||21818683 ^@ Plant Mol. Biol.|||Plant Physiol. ^@ RNA-seq discovery, functional characterization, and comparison of sesquiterpene synthases from Solanum lycopersicum and Solanum habrochaites trichomes.|||The tomato terpene synthase gene family. ^@ Akhtar T.A.|||Bleeker P.M.|||Bohlmann J.|||Bonini M.E.|||De Both M.T.J.|||Diergaarde P.J.|||Falara V.|||Haring M.A.|||Last R.L.|||Matsuba Y.|||Nguyen T.T.|||Nguyen T.T.H.|||Pichersky E.|||Schauvinhold I.|||Schilmiller A.L.|||Schuurink R.C.|||Spyropoulou E.A.|||Volpin H.|||Zerbe P.
http://togogenome.org/gene/4081:TLRP ^@ http://purl.uniprot.org/uniprot/Q40142 ^@ 7919979 ^@ Plant Cell ^@ A novel extracellular matrix protein from tomato associated with lignified secondary cell walls. ^@ Canas L.|||Conejero V.|||Domingo C.|||Gomez M.D.|||Hernandez-Yago J.|||Vera P.
http://togogenome.org/gene/4081:LyesC2p073 ^@ http://purl.uniprot.org/uniprot/A0A0C5C9Q9|||http://purl.uniprot.org/uniprot/Q2MIA4 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LOC101262875 ^@ http://purl.uniprot.org/uniprot/B1N662 ^@ 18339939 ^@ Science ^@ A retrotransposon-mediated gene duplication underlies morphological variation of tomato fruit. ^@ Jiang N.|||Schaffner E.|||Stockinger E.J.|||Xiao H.|||van der Knaap E.
http://togogenome.org/gene/4081:NDPS1 ^@ http://purl.uniprot.org/uniprot/C1K5M2 ^@ 19487664|||23134568|||23757397 ^@ Plant Cell|||Plant J.|||Proc. Natl. Acad. Sci. U.S.A. ^@ Evolution of a complex locus for terpene biosynthesis in Solanum.|||Monoterpenes in the glandular trichomes of tomato are synthesized from a neryl diphosphate precursor rather than geranyl diphosphate.|||The tomato cis-prenyltransferase gene family. ^@ Akhtar T.A.|||Barry C.S.|||Bolger A.M.|||Charbonneau A.L.|||Falara V.|||Fernie A.R.|||Gonzales-Vigil E.|||Klein S.E.|||Kudrna D.|||Larson M.|||Last R.L.|||Lees H.A.|||Leong B.|||Matsuba Y.|||Nguyen T.T.|||Pichersky E.|||Schafer P.|||Schauvinhold I.|||Schilmiller A.L.|||Schmidt A.|||Tissier A.|||Usadel B.|||Wiegert K.|||Wilkerson C.|||Wing R.A.|||Xu R.|||Yu G.
http://togogenome.org/gene/4081:CPT4 ^@ http://purl.uniprot.org/uniprot/K4D3U9 ^@ 23134568 ^@ Plant J. ^@ The tomato cis-prenyltransferase gene family. ^@ Akhtar T.A.|||Klein S.E.|||Lees H.A.|||Matsuba Y.|||Pichersky E.|||Schauvinhold I.|||Yu G.
http://togogenome.org/gene/4081:LOC101263981 ^@ http://purl.uniprot.org/uniprot/K4DEK0 ^@ 28528644 ^@ Cell ^@ Bypassing negative epistasis on yield in tomato imposed by a domestication gene. ^@ Eshed Y.|||Fisher J.|||Goren A.|||Jiang K.|||Lemmon Z.H.|||Liberatore K.L.|||Lippman Z.B.|||Oved M.|||Park S.J.|||Ramos A.|||Soyk S.|||Van Eck J.|||Zamir D.|||van der Knaap E.
http://togogenome.org/gene/4081:MADS-RIN-MADS-MC ^@ http://purl.uniprot.org/uniprot/Q8S4L3 ^@ 11951045 ^@ Science ^@ A MADS-box gene necessary for fruit ripening at the tomato ripening-inhibitor (rin) locus. ^@ Drake R.|||Giovannoni J.|||Medrano D.|||Padmanabhan V.|||Ruezinsky D.|||Schuch W.|||Vrebalov J.|||White R.
http://togogenome.org/gene/4081:tXET-B2 ^@ http://purl.uniprot.org/uniprot/Q43528 ^@ 7632911 ^@ Plant Mol. Biol. ^@ Characterisation of two tomato fruit-expressed cDNAs encoding xyloglucan endo-transglycosylase. ^@ Arrowsmith D.A.|||De Silva J.
http://togogenome.org/gene/4081:PMT5 ^@ http://purl.uniprot.org/uniprot/K4B3F9 ^@ 24833026 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ The sugar transporter inventory of tomato: genome-wide identification and expression analysis. ^@ Akiyama M.|||Aoki K.|||Koh A.|||Makino H.|||Reuscher S.|||Shibata D.|||Shiratake K.|||Yasuda T.
http://togogenome.org/gene/4081:TTS2 ^@ http://purl.uniprot.org/uniprot/E7DN64 ^@ 21059824 ^@ Plant Physiol. ^@ Two oxidosqualene cyclases responsible for biosynthesis of tomato fruit cuticular triterpenoids. ^@ Guhling O.|||Jetter R.|||Li F.|||Rose J.|||Wang Z.|||Yao R.|||Yeats T.
http://togogenome.org/gene/4081:LOC101262882 ^@ http://purl.uniprot.org/uniprot/K4CG62 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:LyesC2p029 ^@ http://purl.uniprot.org/uniprot/A0A0U1ZGW9|||http://purl.uniprot.org/uniprot/Q2MI60 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LOC101262859 ^@ http://purl.uniprot.org/uniprot/K4CUW3 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:TCP10 ^@ http://purl.uniprot.org/uniprot/G3BGV0 ^@ 24903607 ^@ BMC Plant Biol|||BMC Plant Biol. ^@ Identification, cloning and characterization of the tomato TCP transcription factor family. ^@ Angenent G.C.|||Bovy A.G.|||Busscher M.|||Busscher-Lange J.|||Karlova R.|||Lammers M.|||Parapunova V.|||de Maagd R.A.
http://togogenome.org/gene/4081:LOC101261295 ^@ http://purl.uniprot.org/uniprot/K4DAP4 ^@ 27909045 ^@ Plant Physiol|||Plant Physiol. ^@ A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity. ^@ Chen X.|||Connor R.A.|||Gough J.|||Martin G.B.|||Mural R.V.|||Oates M.E.|||Zeng L.|||Zhou B.
http://togogenome.org/gene/4081:FTB ^@ http://purl.uniprot.org/uniprot/P93228 ^@ 9121446 ^@ Mol. Cell. Biol. ^@ Plant farnesyltransferase can restore yeast Ras signaling and mating. ^@ Callan K.L.|||Gruissem W.|||Jenkins S.M.|||Narita J.O.|||Rine J.|||Trueblood C.E.|||Yalovsky S.
http://togogenome.org/gene/4081:LyesC2p006 ^@ http://purl.uniprot.org/uniprot/A0A0C5CEF4|||http://purl.uniprot.org/uniprot/P0CD46|||http://purl.uniprot.org/uniprot/P0CD47 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LeSUT1 ^@ http://purl.uniprot.org/uniprot/A0A060PWC9 ^@ 24833026 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ The sugar transporter inventory of tomato: genome-wide identification and expression analysis. ^@ Akiyama M.|||Aoki K.|||Koh A.|||Makino H.|||Reuscher S.|||Shibata D.|||Shiratake K.|||Yasuda T.
http://togogenome.org/gene/4081:LOC101244060 ^@ http://purl.uniprot.org/uniprot/K4BFL3 ^@ 27909045 ^@ Plant Physiol|||Plant Physiol. ^@ A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity. ^@ Chen X.|||Connor R.A.|||Gough J.|||Martin G.B.|||Mural R.V.|||Oates M.E.|||Zeng L.|||Zhou B.
http://togogenome.org/gene/4081:TM29 ^@ http://purl.uniprot.org/uniprot/Q8VXG0 ^@ 12376628 ^@ Plant Physiol|||Plant Physiol. ^@ Down-regulation of TM29, a tomato SEPALLATA homolog, causes parthenocarpic fruit development and floral reversion. ^@ Ampomah-Dwamena C.|||Morris B.A.|||Sutherland P.|||Veit B.|||Yao J.L.
http://togogenome.org/gene/4081:LOC544026 ^@ http://purl.uniprot.org/uniprot/O24423 ^@ 9225464 ^@ Plant J|||Plant J. ^@ Characterization of a DNA-binding protein that interacts with 5' flanking regions of two fruit-ripening genes. ^@ Coupe S.A.|||Deikman J.
http://togogenome.org/gene/4081:ACS3 ^@ http://purl.uniprot.org/uniprot/Q42881 ^@ 2122449|||7775465 ^@ J. Biol. Chem.|||Proc. Natl. Acad. Sci. U.S.A. ^@ Analysis of LE-ACS3, a 1-aminocyclopropane-1-carboxylic acid synthase gene expressed during flooding in the roots of tomato plants.|||Characterization and sequencing of the active site of 1-aminocyclopropane-1-carboxylate synthase. ^@ Dong J.G.|||Kenny J.W.|||Oetiker J.H.|||Olson D.C.|||Thompson G.A.|||Yang S.F.|||Yip W.K.
http://togogenome.org/gene/4081:LOC101254567 ^@ http://purl.uniprot.org/uniprot/K4BEH0 ^@ 27909045 ^@ Plant Physiol|||Plant Physiol. ^@ A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity. ^@ Chen X.|||Connor R.A.|||Gough J.|||Martin G.B.|||Mural R.V.|||Oates M.E.|||Zeng L.|||Zhou B.
http://togogenome.org/gene/4081:aquaporin ^@ http://purl.uniprot.org/uniprot/K4B428 ^@ 24260152 ^@ PLoS ONE|||PLoS One ^@ Genome-wide identification and expression analysis of aquaporins in tomato. ^@ Akiyama M.|||Aoki K.|||Mori C.|||Reuscher S.|||Shibata D.|||Shiratake K.
http://togogenome.org/gene/4081:LOC100736543 ^@ http://purl.uniprot.org/uniprot/G3KGB1 ^@ 21880077 ^@ Plant J|||Plant J. ^@ A tomato LysM receptor-like kinase promotes immunity and its kinase activity is inhibited by AvrPtoB. ^@ Martin G.B.|||Munkvold K.R.|||Velasquez A.C.|||Zeng L.|||Zhang J.
http://togogenome.org/gene/4081:rpb2 ^@ http://purl.uniprot.org/uniprot/Q42877 ^@ 8616257 ^@ Plant Mol. Biol. ^@ Sequence analysis of the second largest subunit of tomato RNA polymerase II. ^@ Symons R.H.|||Warrilow D.
http://togogenome.org/gene/4081:MAPK8 ^@ http://purl.uniprot.org/uniprot/D9IV43 ^@ 22306326 ^@ Gene ^@ Genome-wide analysis of the mitogen-activated protein kinase gene family in Solanum lycopersicum. ^@ Cheng L.|||Kong F.|||Liu S.|||Lu G.|||Peng Z.|||Wang J.|||Wu J.
http://togogenome.org/gene/4081:LOC544145 ^@ http://purl.uniprot.org/uniprot/Q43495 ^@ 8310077 ^@ Plant Physiol. ^@ Nucleotide sequence of a stamen- and tapetum-specific gene from Lycopersicon esculentum. ^@ Chen R.|||Smith A.G.
http://togogenome.org/gene/4081:cathDInh ^@ http://purl.uniprot.org/uniprot/Q08332|||http://purl.uniprot.org/uniprot/Q9LEG1 ^@ 17012408|||8290647 ^@ Plant Physiol|||Plant Physiol. ^@ A novel function for the cathepsin D inhibitor in tomato.|||Nucleotide sequence of a cathepsin D inhibitor protein from tomato. ^@ Conejero V.|||Guitton M.C.|||Lison P.|||Muhlbach H.P.|||Rodrigo I.|||Werner R.
http://togogenome.org/gene/4081:LOC543872 ^@ http://purl.uniprot.org/uniprot/Q7XYV1 ^@ 12737801 ^@ Dev. Cell ^@ P58(IPK), a plant ortholog of double-stranded RNA-dependent protein kinase PKR inhibitor, functions in viral pathogenesis. ^@ Bilgin D.D.|||Dinesh-Kumar S.P.|||Liu Y.|||Schiff M.
http://togogenome.org/gene/4081:JERF1 ^@ http://purl.uniprot.org/uniprot/Q8LGR9 ^@ 15300440 ^@ Planta ^@ The ethylene-, jasmonate-, abscisic acid- and NaCl-responsive tomato transcription factor JERF1 modulates expression of GCC box-containing genes and salt tolerance in tobacco. ^@ Chen Q.|||Huang D.|||Huang R.|||Huang Z.|||Lu X.|||Tian X.|||Xie B.|||Zhang H.|||Zhang H.'|||Zhang X.
http://togogenome.org/gene/4081:NRAMP3 ^@ http://purl.uniprot.org/uniprot/Q84LR0 ^@ 12709425 ^@ J Biol Chem|||J. Biol. Chem. ^@ Differential regulation of nramp and irt metal transporter genes in wild type and iron uptake mutants of tomato. ^@ Bauer P.|||Bereczky Z.|||Ganal M.|||Schubert V.|||Wang H.Y.
http://togogenome.org/gene/4081:LyesC2p045 ^@ http://purl.uniprot.org/uniprot/A0A0U1ZJX1|||http://purl.uniprot.org/uniprot/Q2MI76 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:Cab-3C ^@ http://purl.uniprot.org/uniprot/P07369 ^@ 3007291 ^@ Gene ^@ Molecular characterization and genetic mapping of two clusters of genes encoding chlorophyll a/b-binding proteins in Lycopersicon esculentum (tomato). ^@ Bernatzky R.|||Breidenbach R.B.|||Cashmore A.R.|||Kausch A.P.|||Pichersky E.|||Tanksley S.D.
http://togogenome.org/gene/4081:P4 ^@ http://purl.uniprot.org/uniprot/Q04108|||http://purl.uniprot.org/uniprot/Q546T9 ^@ 1421154 ^@ Plant Mol. Biol. ^@ Differential accumulation of mRNAs encoding extracellular and intracellular PR proteins in tomato induced by virulent and avirulent races of Cladosporium fulvum. ^@ Joosten M.H.A.J.|||Wagemakers C.A.M.|||de Wit P.J.G.M.|||van Kan J.A.L.|||van den Berg-Velthuis G.C.M.
http://togogenome.org/gene/4081:LeMAN2 ^@ http://purl.uniprot.org/uniprot/Q6YM50|||http://purl.uniprot.org/uniprot/Q9FZ03 ^@ 10938343|||14976239 ^@ Plant Physiol. ^@ A germination-specific endo-beta-mannanase gene is expressed exclusively in the micropylar endosperm cap of tomato seeds.|||A novel endo-beta-mannanase gene in tomato LeMAN5 is associated with anther and pollen development. ^@ Bradford K.J.|||Filichkin S.A.|||Gee O.H.|||Leonard J.M.|||Liu P.-P.|||Monteros A.|||Nonogaki H.
http://togogenome.org/gene/4081:Lemir ^@ http://purl.uniprot.org/uniprot/O48625 ^@ 9733543 ^@ Plant Physiol|||Plant Physiol. ^@ Characterization of LeMir, a root-knot nematode-induced gene in tomato with an encoded product secreted from the root. ^@ Brenner E.D.|||Kaloshian I.|||Lambert K.N.|||Williamson V.M.
http://togogenome.org/gene/4081:PHYB2 ^@ http://purl.uniprot.org/uniprot/Q9SWS6 ^@ 10485280 ^@ Mol Gen Genet|||Mol. Gen. Genet. ^@ Characterization of the gene encoding the apoprotein of phytochrome B2 in tomato, and identification of molecular lesions in two mutant alleles. ^@ Cordonnier-Pratt M.M.|||Hanhart C.J.|||Kelmenson P.M.|||Kendrick C.I.|||Kendrick R.E.|||Kerckhoffs L.H.|||Koornneef M.|||Pratt L.H.|||Schreuder M.E.
http://togogenome.org/gene/4081:TMP1 ^@ http://purl.uniprot.org/uniprot/P15003 ^@ 2528055 ^@ Mol. Gen. Genet. ^@ Molecular cloning, nucleotide sequence, and abscisic acid induction of a suberization-associated highly anionic peroxidase. ^@ Kolattukudy P.E.|||Roberts E.
http://togogenome.org/gene/4081:MAPKKKalpha ^@ http://purl.uniprot.org/uniprot/Q6RFY3 ^@ 15272302 ^@ EMBO J|||EMBO J. ^@ MAPKKKalpha is a positive regulator of cell death associated with both plant immunity and disease. ^@ Martin G.B.|||Pedley K.F.|||del Pozo O.
http://togogenome.org/gene/4081:EXPA3 ^@ http://purl.uniprot.org/uniprot/Q9ZP33 ^@ 10080718 ^@ Plant Mol Biol|||Plant Mol. Biol. ^@ Differential expression of expansin gene family members during growth and ripening of tomato fruit. ^@ Brummell D.A.|||Dunsmuir P.|||Harpster M.H.
http://togogenome.org/gene/4081:LOC543885 ^@ http://purl.uniprot.org/uniprot/Q7Y039 ^@ 20946942 ^@ Gene ^@ Identification of three tomato flower and fruit MADS-box proteins with a putative histone deacetylase binding domain. ^@ Alcaraz J.P.|||Gaffe J.|||Kuntz M.|||Lemercier C.
http://togogenome.org/gene/4081:LOC101252294 ^@ http://purl.uniprot.org/uniprot/Q56R06 ^@ 15842623 ^@ Plant J. ^@ EDS1 in tomato is required for resistance mediated by TIR-class R genes and the receptor-like R gene Ve. ^@ Aegerter B.J.|||Baker B.|||Handley V.|||Hu G.|||Hwang C.F.|||Li Y.|||Navarre R.|||Ustach C.|||Williamson V.M.|||deHart A.K.|||deHart A.K.A.
http://togogenome.org/gene/4081:CAB13 ^@ http://purl.uniprot.org/uniprot/P27489 ^@ 1912506 ^@ Plant Mol. Biol. ^@ Sequence of a tomato gene encoding a third type of LHCII chlorophyll a/b-binding polypeptide. ^@ Aebersold R.|||Green B.R.|||McGrath J.M.|||Pichersky E.|||Schwartz E.|||Stasys R.
http://togogenome.org/gene/4081:MYB12 ^@ http://purl.uniprot.org/uniprot/B4YAJ8 ^@ 18643978 ^@ Plant J. ^@ AtMYB12 regulates caffeoyl quinic acid and flavonol synthesis in tomato: expression in fruit results in very high levels of both types of polyphenol. ^@ Bailey P.|||Butelli E.|||Hill L.|||Luo J.|||Martin C.|||Niggeweg R.|||Parr A.|||Weisshaar B.
http://togogenome.org/gene/4081:Tm-1 ^@ http://purl.uniprot.org/uniprot/A7M6E8 ^@ 17238011|||17699618|||19423673|||24299004|||24710868|||3686829 ^@ Arch. Virol.|||Mol. Plant Pathol.|||Proc. Natl. Acad. Sci. U.S.A.|||Theor. Appl. Genet.|||Virology ^@ An inhibitor of viral RNA replication is encoded by a plant resistance gene.|||An inhibitory interaction between viral and cellular proteins underlies the resistance of tomato to nonadapted tobamoviruses.|||Characterization of Tm-1 gene action on replication of common isolates and a resistance-breaking isolate of TMV.|||Characterization of disease resistance gene-like sequences in near-isogenic lines of tomato.|||Functional characterization of the mutations in Pepper mild mottle virus overcoming tomato tm-1-mediated resistance.|||The double-resistance-breaking Tomato mosaic virus strain ToMV1-2 contains two independent single resistance-breaking domains. ^@ Hikichi Y.|||Ishibashi K.|||Ishikawa M.|||Kiba A.|||Kimura K.|||Kishibayashi N.|||Masuda K.|||Matsumoto K.|||Meshi T.|||Mizumoto H.|||Morikawa Y.|||Motoyoshi F.|||Murata M.|||Naito S.|||Ohmori T.|||Okada Y.|||Okuno T.|||Pfitzner A.J.P.|||Strasser M.|||Tokunaga M.|||Watanabe Y.
http://togogenome.org/gene/4081:LOC101250809 ^@ http://purl.uniprot.org/uniprot/K4C8H1 ^@ 27909045 ^@ Plant Physiol|||Plant Physiol. ^@ A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity. ^@ Chen X.|||Connor R.A.|||Gough J.|||Martin G.B.|||Mural R.V.|||Oates M.E.|||Zeng L.|||Zhou B.
http://togogenome.org/gene/4081:TPS31 ^@ http://purl.uniprot.org/uniprot/G5CV46 ^@ 21813655|||21818683 ^@ Plant Mol. Biol.|||Plant Physiol. ^@ RNA-seq discovery, functional characterization, and comparison of sesquiterpene synthases from Solanum lycopersicum and Solanum habrochaites trichomes.|||The tomato terpene synthase gene family. ^@ Akhtar T.A.|||Bleeker P.M.|||Bohlmann J.|||Bonini M.E.|||De Both M.T.J.|||Diergaarde P.J.|||Falara V.|||Haring M.A.|||Last R.L.|||Matsuba Y.|||Nguyen T.T.|||Nguyen T.T.H.|||Pichersky E.|||Schauvinhold I.|||Schilmiller A.L.|||Schuurink R.C.|||Spyropoulou E.A.|||Volpin H.|||Zerbe P.
http://togogenome.org/gene/4081:LOC543815 ^@ http://purl.uniprot.org/uniprot/Q9FT21 ^@ 15037622 ^@ J Biol Chem|||J. Biol. Chem. ^@ Differential roles of tau class glutathione S-transferases in oxidative stress. ^@ Al-Sabarna K.|||Atanassova N.|||Clatot N.|||Kampranis S.C.|||Kanellopoulos P.N.|||Kilili K.G.|||Makris A.M.|||Vardanyan A.
http://togogenome.org/gene/4081:PP5 ^@ http://purl.uniprot.org/uniprot/Q84K11 ^@ 12972652 ^@ Plant Physiol. ^@ The subcellular localization of plant protein phosphatase 5 isoforms is determined by alternative splicing. ^@ Cornelissen B.J.C.|||Gadella T.W.J. Jr.|||Haring M.A.|||Vermeer J.E.M.|||Vossen J.H.|||de Vroomen M.J.|||de la Fuente van Bentem S.
http://togogenome.org/gene/4081:SlIPT5 ^@ http://purl.uniprot.org/uniprot/I0IUP9 ^@ 22865911 ^@ J Exp Bot|||J. Exp. Bot. ^@ Roles and regulation of cytokinins in tomato fruit development. ^@ Fukuda M.|||Honda I.|||Imanishi S.|||Kikuchi K.|||Matsuo S.
http://togogenome.org/gene/4081:LOC543703 ^@ http://purl.uniprot.org/uniprot/Q8W1R8 ^@ 11805344 ^@ Proc Natl Acad Sci U S A|||Proc. Natl. Acad. Sci. U.S.A. ^@ The tomato Blind gene encodes a MYB transcription factor that controls the formation of lateral meristems. ^@ Carriero F.|||Cellini F.|||Fiore C.|||Schmitz G.|||Theres K.|||Tillmann E.
http://togogenome.org/gene/4081:JA2L ^@ http://purl.uniprot.org/uniprot/A0A3Q7HH64 ^@ 25005917|||28733419|||30610166 ^@ Plant Cell ^@ Closely related NAC transcription factors of tomato differentially regulate stomatal closure and reopening during pathogen attack.|||MYC2 orchestrates a hierarchical transcriptional cascade that regulates jasmonate-mediated plant immunity in tomato.|||MYC2 regulates the termination of jasmonate signaling via an autoregulatory negative feedback loop. ^@ Chen Q.|||Deng L.|||Du M.|||Fang M.|||Huang T.|||Huang Z.|||Jiang H.|||Kang L.|||Li C.|||Li C.B.|||Li H.|||Li J.|||Li S.|||Liu Y.|||Lu Y.|||Shen J.|||Tzeng D.T.W.|||Wang B.|||Wang Q.|||Wei J.|||Wu F.|||Yan L.|||Yang T.|||Zhai Q.|||Zhao J.|||Zhong S.|||Zhou M.
http://togogenome.org/gene/4081:LOC101250514 ^@ http://purl.uniprot.org/uniprot/V5YMV7 ^@ 24260152 ^@ PLoS ONE|||PLoS One ^@ Genome-wide identification and expression analysis of aquaporins in tomato. ^@ Akiyama M.|||Aoki K.|||Mori C.|||Reuscher S.|||Shibata D.|||Shiratake K.
http://togogenome.org/gene/4081:LOC101260872 ^@ http://purl.uniprot.org/uniprot/K4CYF2 ^@ 27909045 ^@ Plant Physiol|||Plant Physiol. ^@ A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity. ^@ Chen X.|||Connor R.A.|||Gough J.|||Martin G.B.|||Mural R.V.|||Oates M.E.|||Zeng L.|||Zhou B.
http://togogenome.org/gene/4081:CIP1 ^@ http://purl.uniprot.org/uniprot/Q2VY19 ^@ 16623906 ^@ Plant J|||Plant J. ^@ The CCAAT binding factor can mediate interactions between CONSTANS-like proteins and DNA. ^@ Ben-Naim O.|||Coupland G.|||Eshed R.|||Lifschitz E.|||Parnis A.|||Samach A.|||Shalit A.|||Teper-Bamnolker P.
http://togogenome.org/gene/4081:ETR1 ^@ http://purl.uniprot.org/uniprot/Q41342 ^@ 8704141|||9721682 ^@ Plant J.|||Plant Mol. Biol. ^@ Differential regulation of the tomato ETR gene family throughout plant development.|||The mRNA for an ETR1 homologue in tomato is constitutively expressed in vegetative and reproductive tissues. ^@ Kalaitzis P.|||Klee H.J.|||Lashbrook C.C.|||Mattoo A.K.|||Tieman D.M.|||Tucker M.L.|||Zhou D.
http://togogenome.org/gene/4081:sbt3 ^@ http://purl.uniprot.org/uniprot/O82777 ^@ 10350089|||19332543|||19407393|||19805099|||27259555|||27451395 ^@ Acta Crystallogr. F|||J. Biol. Chem.|||J. Exp. Bot.|||Plant Mol. Biol.|||Proc. Natl. Acad. Sci. U.S.A. ^@ Characterization of the subtilase gene family in tomato (Lycopersicon esculentum Mill.).|||Functional Characterization of Propeptides in Plant Subtilases as Intramolecular Chaperones and Inhibitors of the Mature Protease.|||Purification, crystallization and preliminary X-ray diffraction analysis of a plant subtilase.|||Structural basis for Ca2+-independence and activation by homodimerization of tomato subtilase 3.|||The protease-associated domain and C-terminal extension are required for zymogen processing, sorting within the secretory pathway, and activity of tomato subtilase 3 (SlSBT3).|||The subtilisin-like protease SBT3 contributes to insect resistance in tomato. ^@ Amrhein N.|||Cedzich A.|||Gabler L.|||Hauske P.|||Huber R.|||Huttenlocher F.|||Kaiser M.|||Kuhn B.M.|||Leptihn S.|||Lequart-Pillon M.|||Meichtry J.|||Meyer M.|||Ottmann C.|||Pau-Roblot C.|||Pelloux J.|||Pfannstiel J.|||Procopio S.|||Rose R.|||Schaller A.|||Stintzi A.|||Stroeder J.|||Welz M.
http://togogenome.org/gene/4081:LOC778317 ^@ http://purl.uniprot.org/uniprot/Q53U40 ^@ 20350329 ^@ BMC Genomics ^@ Large-scale analysis of full-length cDNAs from the tomato (Solanum lycopersicum) cultivar Micro-Tom, a reference system for the Solanaceae genomics. ^@ Aoki K.|||Arie T.|||Egusa M.|||Ezura H.|||Fukushima S.|||Ichinose Y.|||Kawamura S.|||Kikuchi M.|||Kodama M.|||Kohara Y.|||Kurabayashi A.|||Narita T.|||Okabe A.|||Omura T.|||Ooga K.|||Sakurai N.|||Sato Y.|||Satoh S.|||Shibata D.|||Shin-I T.|||Shin-i T.|||Suda K.|||Suzuki A.|||Suzuki T.|||Takahashi H.|||Torii M.|||Tsugane T.|||Watanabe M.|||Watanabe Y.|||Yamamoto N.|||Yano K.|||Yazawa K.
http://togogenome.org/gene/4081:ERF3-like ^@ http://purl.uniprot.org/uniprot/Q8S9H4 ^@ 15834808 ^@ Biotechnol Lett|||Biotechnol. Lett. ^@ Cloning and DNA-binding properties of ethylene response factor, LeERF1 and LeERF2, in tomato. ^@ Benzhong Z.|||Bianyun Y.|||Daqi F.|||Fu D.|||Hao Y.|||Hongxing Z.|||Luo Y.|||Wentao X.|||Xu W.|||Yanling H.|||Yu B.|||Yunbo L.|||Zhang H.|||Zhu B.
http://togogenome.org/gene/4081:MKS2 ^@ http://purl.uniprot.org/uniprot/E0YCS8 ^@ 20605911 ^@ Plant Physiol|||Plant Physiol. ^@ Enzymatic functions of wild tomato methylketone synthases 1 and 2. ^@ Auldridge M.E.|||Ben-Israel I.|||Bhuiyan N.|||Fridman E.|||Guo Y.|||Iijima Y.|||Nguyen T.T.|||Noel J.P.|||Pichersky E.|||Schauvinhold I.|||Yu G.
http://togogenome.org/gene/4081:LOC101263969 ^@ http://purl.uniprot.org/uniprot/P07370 ^@ 3007291 ^@ Gene ^@ Molecular characterization and genetic mapping of two clusters of genes encoding chlorophyll a/b-binding proteins in Lycopersicon esculentum (tomato). ^@ Bernatzky R.|||Breidenbach R.B.|||Cashmore A.R.|||Kausch A.P.|||Pichersky E.|||Tanksley S.D.
http://togogenome.org/gene/4081:LOC543971 ^@ http://purl.uniprot.org/uniprot/Q41350 ^@ 8972917|||9188482 ^@ Gene|||J. Biol. Chem. ^@ A flower-specific gene encoding an osmotin-like protein from Lycopersicon esculentum.|||Differential extraction and protein sequencing reveals major differences in patterns of primary cell wall proteins from plants. ^@ Bolwell G.P.|||Chen R.|||Gerrish C.|||Gilroy J.S.|||Mitchell G.P.|||Robertson D.|||Slabas A.R.|||Smith A.G.|||Wang F.
http://togogenome.org/gene/4081:CCH ^@ http://purl.uniprot.org/uniprot/Q84KJ2 ^@ 12727232 ^@ Biochem Biophys Res Commun|||Biochem. Biophys. Res. Commun. ^@ Identification of a copper chaperone from tomato fruits infected with Botrytis cinerea by differential display. ^@ Company P.|||Gonzalez-Bosch C.
http://togogenome.org/gene/4081:LAPA2 ^@ http://purl.uniprot.org/uniprot/Q8GZD8 ^@ 12746529 ^@ Plant Physiol|||Plant Physiol. ^@ Isolation and characterization of the neutral leucine aminopeptidase (LapN) of tomato. ^@ Park S.Y.|||Tu C.J.|||Walling L.L.
http://togogenome.org/gene/4081:LOC101258213 ^@ http://purl.uniprot.org/uniprot/K4BBT1 ^@ 27909045 ^@ Plant Physiol|||Plant Physiol. ^@ A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity. ^@ Chen X.|||Connor R.A.|||Gough J.|||Martin G.B.|||Mural R.V.|||Oates M.E.|||Zeng L.|||Zhou B.
http://togogenome.org/gene/4081:LyesC2p057 ^@ http://purl.uniprot.org/uniprot/A0A0C5CED1|||http://purl.uniprot.org/uniprot/Q2MI88 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:SGT1 ^@ http://purl.uniprot.org/uniprot/Q949K3 ^@ 10972295|||11457984 ^@ Nature|||Plant Physiol|||Plant Physiol. ^@ JOINTLESS is a MADS-box gene controlling tomato flower abscission zone development.|||Sequence and analysis of the tomato JOINTLESS locus. ^@ Begum D.|||Budiman M.A.|||Chuang H.W.|||Goff S.A.|||Irish E.E.|||Mao L.|||Szymkowiak E.J.|||Wing R.A.
http://togogenome.org/gene/4081:mcpi ^@ http://purl.uniprot.org/uniprot/P01076 ^@ 1715974|||7236596 ^@ Biochemistry|||Mol. Gen. Genet. ^@ Amino acid sequence of a carboxypeptidase inhibitor from tomato fruit.|||Regulation of metallocarboxypeptidase inhibitor gene expression in tomato. ^@ Hass G.M.|||Hermodson M.A.|||Houck C.M.|||Martineau B.|||McBride K.E.
http://togogenome.org/gene/4081:PRK1 ^@ http://purl.uniprot.org/uniprot/O64398 ^@ 9501107 ^@ Plant Cell ^@ Pollen tube localization implies a role in pollen-pistil interactions for the tomato receptor-like protein kinases LePRK1 and LePRK2. ^@ Eyal Y.|||McCormick S.|||Muschietti J.
http://togogenome.org/gene/4081:FUL1 ^@ http://purl.uniprot.org/uniprot/Q8H284 ^@ 13677468 ^@ Plant Mol Biol|||Plant Mol. Biol. ^@ MADS-box genes expressed during tomato seed and fruit development. ^@ Boggio S.B.|||Busi M.V.|||Bustamante C.|||D'Angelo C.|||Hidalgo-Cuevas M.|||Valle E.M.|||Zabaleta E.
http://togogenome.org/gene/4081:cycd3c3 ^@ http://purl.uniprot.org/uniprot/Q9SMD4 ^@ 11113158 ^@ J Exp Bot|||J. Exp. Bot. ^@ Isolation of three distinct CycD3 genes expressed during fruit development in tomato. ^@ Kvarnheden A.|||Morris B.A.|||O'Brien I.|||Yao J.L.|||Zhan X.
http://togogenome.org/gene/4081:Prg1 ^@ http://purl.uniprot.org/uniprot/Q9M723 ^@ 14617079|||28733419|||30610166 ^@ Plant Cell|||Plant J. ^@ MYC2 orchestrates a hierarchical transcriptional cascade that regulates jasmonate-mediated plant immunity in tomato.|||MYC2 regulates the termination of jasmonate signaling via an autoregulatory negative feedback loop.|||Virulence systems of Pseudomonas syringae pv. tomato promote bacterial speck disease in tomato by targeting the jasmonate signaling pathway. ^@ Bender C.L.|||Chen Q.|||Deng L.|||Du M.|||Fang M.|||He S.Y.|||Howe G.A.|||Huang Z.|||Li C.|||Li C.B.|||Liu Y.|||Lu Y.|||Schaller A.|||Shen J.|||Thilmony R.|||Tzeng D.T.W.|||Wang Q.|||Wu F.|||Yang T.|||Zhai Q.|||Zhao J.|||Zhao Y.|||Zhong S.|||Zhou M.
http://togogenome.org/gene/4081:SFP5 ^@ http://purl.uniprot.org/uniprot/A0A0A8JCK7 ^@ 24833026 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ The sugar transporter inventory of tomato: genome-wide identification and expression analysis. ^@ Akiyama M.|||Aoki K.|||Koh A.|||Makino H.|||Reuscher S.|||Shibata D.|||Shiratake K.|||Yasuda T.
http://togogenome.org/gene/4081:LOC101267475 ^@ http://purl.uniprot.org/uniprot/K4D6Q0 ^@ 24265273 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ A new tomato NAC (NAM/ATAF1/2/CUC2) transcription factor, SlNAC4, functions as a positive regulator of fruit ripening and carotenoid accumulation. ^@ Chen G.|||Dong T.|||Hu Z.|||Tu Y.|||Wang Y.|||Zhou S.|||Zhu M.
http://togogenome.org/gene/4081:LOC101245893 ^@ http://purl.uniprot.org/uniprot/K4CYU9 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:LOC101262823 ^@ http://purl.uniprot.org/uniprot/A0A3Q7H274 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:LOC100736485 ^@ http://purl.uniprot.org/uniprot/G3KGB3 ^@ 21880077 ^@ Plant J|||Plant J. ^@ A tomato LysM receptor-like kinase promotes immunity and its kinase activity is inhibited by AvrPtoB. ^@ Martin G.B.|||Munkvold K.R.|||Velasquez A.C.|||Zeng L.|||Zhang J.
http://togogenome.org/gene/4081:TIL ^@ http://purl.uniprot.org/uniprot/Q38JD4 ^@ 16306142 ^@ Plant Physiol|||Plant Physiol. ^@ Identification, expression, and evolutionary analyses of plant lipocalins. ^@ Charron J.B.|||Chauve C.|||Danyluk J.|||Frenette Charron J.B.|||Ouellet F.|||Pelletier M.|||Sarhan F.
http://togogenome.org/gene/4081:CMPG1 ^@ http://purl.uniprot.org/uniprot/Q1WM08 ^@ 16531490|||20457921 ^@ Plant Cell|||Proc. Natl. Acad. Sci. U.S.A. ^@ Phytophthora infestans effector AVR3a is essential for virulence and manipulates plant immunity by stabilizing host E3 ligase CMPG1.|||The U-box protein CMPG1 is required for efficient activation of defense mechanisms triggered by multiple resistance genes in tobacco and tomato. ^@ Armstrong M.R.|||Birch P.R.|||Boevink P.C.|||Bos J.I.|||Bryan G.|||Dixelius C.|||Engelhardt S.|||Gilroy E.M.|||Gonzalez-Lamothe R.|||Harrower B.|||Hein I.|||Jones J.D.|||Kamoun S.|||Ludwig A.A.|||Panicot M.|||Sadanandom A.|||Shirasu K.|||Taylor R.M.|||Tsitsigiannis D.I.|||Vetukuri R.R.|||Whisson S.C.|||Zhendong T.
http://togogenome.org/gene/4081:LOC100736484 ^@ http://purl.uniprot.org/uniprot/G3KGB2 ^@ 21880077 ^@ Plant J|||Plant J. ^@ A tomato LysM receptor-like kinase promotes immunity and its kinase activity is inhibited by AvrPtoB. ^@ Martin G.B.|||Munkvold K.R.|||Velasquez A.C.|||Zeng L.|||Zhang J.
http://togogenome.org/gene/4081:LOC101267842 ^@ http://purl.uniprot.org/uniprot/A0A3Q7I5W4 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:LOC101250510 ^@ http://purl.uniprot.org/uniprot/A0A3Q7HJ03 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:LOC101265738 ^@ http://purl.uniprot.org/uniprot/K4C998 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:ht2 ^@ http://purl.uniprot.org/uniprot/A0A060PVS3|||http://purl.uniprot.org/uniprot/Q9STA8 ^@ 11198428|||24833026 ^@ Plant Cell Physiol|||Plant Cell Physiol.|||Plant Mol Biol|||Plant Mol. Biol. ^@ Hexose transporters of tomato: molecular cloning, expression analysis and functional characterization.|||The sugar transporter inventory of tomato: genome-wide identification and expression analysis. ^@ Akiyama M.|||Aoki K.|||Gear M.L.|||Koh A.|||Makino H.|||McCurdy D.W.|||McPhillips M.L.|||Patrick J.W.|||Reuscher S.|||Shibata D.|||Shiratake K.|||Yasuda T.
http://togogenome.org/gene/4081:phyA ^@ http://purl.uniprot.org/uniprot/Q41331 ^@ 9681030 ^@ Plant J|||Plant J. ^@ Molecular analysis of PHYA in wild-type and phytochrome A-deficient mutants of tomato. ^@ Brandstadter J.|||Cordonnier-Pratt M.M.|||Kendrick R.E.|||Kerckhoffs L.H.|||Kerckhoffs L.J.|||Lazarova G.I.|||Matsui M.|||Pratt L.H.
http://togogenome.org/gene/4081:LOC101254924 ^@ http://purl.uniprot.org/uniprot/K4CL78 ^@ 29655242 ^@ New Phytol|||New Phytol. ^@ The tomato MAX1 homolog, SlMAX1, is involved in the biosynthesis of tomato strigolactones from carlactone. ^@ Bimbo A.|||Bouwmeester H.J.|||Cheng X.|||Diez-Simon C.|||Flokova K.|||Ruyter-Spira C.|||Wang Y.|||Zhang Y.
http://togogenome.org/gene/4081:EBF1 ^@ http://purl.uniprot.org/uniprot/Q2PQJ1 ^@ 19903730 ^@ J Exp Bot|||J. Exp. Bot. ^@ Silencing Sl-EBF1 and Sl-EBF2 expression causes constitutive ethylene response phenotype, accelerated plant senescence, and fruit ripening in tomato. ^@ Bouzayen M.|||Deng W.|||Li Z.|||Pirrello J.|||Regad F.|||Wu Y.|||Yang Y.
http://togogenome.org/gene/4081:VDE ^@ http://purl.uniprot.org/uniprot/C0KZ34 ^@ 19767125 ^@ J Plant Physiol|||J. Plant Physiol. ^@ Overexpression of violaxanthin de-epoxidase gene alleviates photoinhibition of PSII and PSI in tomato during high light and chilling stress. ^@ Dong X.C.|||Feng H.L.|||Gao S.|||Han H.|||Li B.|||Meng Q.W.
http://togogenome.org/gene/4081:eIF-5A4 ^@ http://purl.uniprot.org/uniprot/Q9AXQ3 ^@ 11278418 ^@ J. Biol. Chem. ^@ Isolation and characterization of senescence-induced cDNAs encoding deoxyhypusine synthase and eucaryotic translation initiation factor 5A from tomato. ^@ Lu L.|||Thompson J.E.|||Wang D.|||Wang T.-W.
http://togogenome.org/gene/4081:LyesC2p022 ^@ http://purl.uniprot.org/uniprot/A0A0C5CEF2|||http://purl.uniprot.org/uniprot/Q2MIC2 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:TCP16 ^@ http://purl.uniprot.org/uniprot/G3BGV6 ^@ 24903607 ^@ BMC Plant Biol|||BMC Plant Biol. ^@ Identification, cloning and characterization of the tomato TCP transcription factor family. ^@ Angenent G.C.|||Bovy A.G.|||Busscher M.|||Busscher-Lange J.|||Karlova R.|||Lammers M.|||Parapunova V.|||de Maagd R.A.
http://togogenome.org/gene/4081:Eix1 ^@ http://purl.uniprot.org/uniprot/Q6JN47 ^@ 15155877 ^@ Plant Cell ^@ The receptor for the fungal elicitor ethylene-inducing xylanase is a member of a resistance-like gene family in tomato. ^@ Avni A.|||Ron M.
http://togogenome.org/gene/4081:LyesC2p052 ^@ http://purl.uniprot.org/uniprot/A0A0C5CED3|||http://purl.uniprot.org/uniprot/Q2MI83 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:SERK3B ^@ http://purl.uniprot.org/uniprot/G0XZA6 ^@ 21481032 ^@ Plant J|||Plant J. ^@ The receptor-like kinase SlSERK1 is required for Mi-1-mediated resistance to potato aphids in tomato. ^@ Atamian H.S.|||Kaloshian I.|||Li B.|||Mantelin S.|||Peng H.C.|||Takken F.L.
http://togogenome.org/gene/4081:LyesC2p072 ^@ http://purl.uniprot.org/uniprot/A0A0C5CEB3|||http://purl.uniprot.org/uniprot/Q2MIA3 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:COBRA-like ^@ http://purl.uniprot.org/uniprot/K4B708 ^@ 23140186 ^@ BMC Plant Biol|||BMC Plant Biol. ^@ Functional characterization of a tomato COBRA-like gene functioning in fruit development and ripening. ^@ Cao Y.|||Giovannoni J.|||Liu Y.|||Tang X.|||Xiao F.
http://togogenome.org/gene/4081:LOC101246352 ^@ http://purl.uniprot.org/uniprot/Q56R02 ^@ 15842623 ^@ Plant J. ^@ EDS1 in tomato is required for resistance mediated by TIR-class R genes and the receptor-like R gene Ve. ^@ Aegerter B.J.|||Baker B.|||Handley V.|||Hu G.|||Hwang C.F.|||Li Y.|||Navarre R.|||Ustach C.|||Williamson V.M.|||deHart A.K.|||deHart A.K.A.
http://togogenome.org/gene/4081:PT2 ^@ http://purl.uniprot.org/uniprot/O22549 ^@ 9449838 ^@ Plant Physiol|||Plant Physiol. ^@ Tomato phosphate transporter genes are differentially regulated in plant tissues by phosphorus. ^@ Kononowicz A.K.|||Liu C.|||Muchhal U.S.|||Raghothama K.G.|||Uthappa M.
http://togogenome.org/gene/4081:RAN2B ^@ http://purl.uniprot.org/uniprot/P38547 ^@ 8016079 ^@ Proc. Natl. Acad. Sci. U.S.A. ^@ A small nuclear GTP-binding protein from tomato suppresses a Schizosaccharomyces pombe cell-cycle mutant. ^@ Ach R.A.|||Gruissem W.
http://togogenome.org/gene/4081:Ve1 ^@ http://purl.uniprot.org/uniprot/C4NAS0 ^@ 19321708 ^@ Plant Physiol|||Plant Physiol. ^@ Genetic dissection of Verticillium wilt resistance mediated by tomato Ve1. ^@ Castroverde C.D.|||Fradin E.F.|||Juarez Ayala J.C.|||Liu C.M.|||Nazar R.N.|||Robb J.|||Thomma B.P.|||Zhang Z.
http://togogenome.org/gene/4081:LOC543884 ^@ http://purl.uniprot.org/uniprot/Q7Y040 ^@ 20946942|||28528644 ^@ Cell|||Gene ^@ Bypassing negative epistasis on yield in tomato imposed by a domestication gene.|||Identification of three tomato flower and fruit MADS-box proteins with a putative histone deacetylase binding domain. ^@ Alcaraz J.P.|||Eshed Y.|||Fisher J.|||Gaffe J.|||Goren A.|||Jiang K.|||Kuntz M.|||Lemercier C.|||Lemmon Z.H.|||Liberatore K.L.|||Lippman Z.B.|||Oved M.|||Park S.J.|||Ramos A.|||Soyk S.|||Van Eck J.|||Zamir D.|||van der Knaap E.
http://togogenome.org/gene/4081:LOC101262297 ^@ http://purl.uniprot.org/uniprot/A0A3Q7JCM5 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:LOC101259430 ^@ http://purl.uniprot.org/uniprot/E1U2K4 ^@ 21398258 ^@ Plant Physiol|||Plant Physiol. ^@ Tomato RAV Transcription Factor Is a Pivotal Modulator Involved in the AP2/EREBP-Mediated Defense Pathway.|||Tomato RAV transcription factor is a pivotal modulator involved in the AP2/EREBP-mediated defense pathway. ^@ Chan M.T.|||Chao T.C.|||Cheng C.P.|||Hsieh T.H.|||Li C.W.|||Sanjaya|||Su R.C.|||You S.J.
http://togogenome.org/gene/4081:PPO ^@ http://purl.uniprot.org/uniprot/Q08304 ^@ 8098228 ^@ Plant Mol. Biol. ^@ Organisation of the tomato polyphenol oxidase gene family. ^@ Eannetta N.T.|||Newman S.M.|||Prince J.P.|||Steffens J.C.|||Tanksley S.D.|||Yu H.|||de Vicente M.C.
http://togogenome.org/gene/4081:LHA1 ^@ http://purl.uniprot.org/uniprot/P22180 ^@ 16667929 ^@ Plant Physiol. ^@ Molecular cloning of tomato plasma membrane H+-ATPase. ^@ Bennett A.B.|||Chetelat R.T.|||Ewing N.N.|||Meyer D.J.|||Wimmers L.E.
http://togogenome.org/gene/4081:PLDa1 ^@ http://purl.uniprot.org/uniprot/Q9AWC0 ^@ 11446372 ^@ Plant J|||Plant J. ^@ Characterization of five tomato phospholipase D cDNAs: rapid and specific expression of LePLDbeta1 on elicitation with xylanase. ^@ Haring M.|||Laxalt A.M.|||Munnik T.|||Musgrave A.|||Parigi L.|||Tameling W.I.|||Verdonk J.C.|||Vossen J.|||ter Riet B.
http://togogenome.org/gene/4081:LyesC2p042 ^@ http://purl.uniprot.org/uniprot/A0A0C5C9U7|||http://purl.uniprot.org/uniprot/Q2MI73 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:SSTLE1 ^@ http://purl.uniprot.org/uniprot/O64961 ^@ 11090225|||21813655|||21818683|||9482865 ^@ Plant Cell|||Plant Mol. Biol.|||Plant Physiol.|||Proc. Natl. Acad. Sci. U.S.A. ^@ Genetic Control and Evolution of Sesquiterpene Biosynthesis in Lycopersicon esculentum and Lycopersicon hirsutum.|||Germacrene C synthase from Lycopersicon esculentum cv. VFNT cherry tomato: cDNA isolation, characterization, and bacterial expression of the multiple product sesquiterpene cyclase.|||RNA-seq discovery, functional characterization, and comparison of sesquiterpene synthases from Solanum lycopersicum and Solanum habrochaites trichomes.|||The tomato terpene synthase gene family. ^@ Akhtar T.A.|||Bleeker P.M.|||Bohlmann J.|||Bonini M.E.|||Breeden D.|||Colby S.M.|||Crock J.|||Croteau R.|||De Both M.T.J.|||Diergaarde P.J.|||Dowdle-Rizzo B.|||Falara V.|||Haring M.A.|||Last R.L.|||Lemaux P.G.|||Matsuba Y.|||Monforte A.J.|||Nguyen T.T.|||Nguyen T.T.H.|||Pichersky E.|||Schauvinhold I.|||Schilmiller A.L.|||Schuurink R.C.|||Spyropoulou E.A.|||Steffens J.C.|||Tanksley S.D.|||Volpin H.|||Zerbe P.|||van Der Hoeven R.S.
http://togogenome.org/gene/4081:LE25 ^@ http://purl.uniprot.org/uniprot/Q00747 ^@ 1531034 ^@ Plant Mol. Biol. ^@ Nucleotide sequence of an ABA-induced tomato gene that is expressed in wilted vegetative organs and developing seeds. ^@ Bray E.A.|||Cohen A.
http://togogenome.org/gene/4081:vp1.1 ^@ http://purl.uniprot.org/uniprot/K4Q1Y8 ^@ 22915738 ^@ J Exp Bot|||J. Exp. Bot. ^@ Role of Vacuolar H+-inorganic Pyrophosphatase in Tomato Fruit Development.|||Role of Vacuolar H+-inorganic pyrophosphatase in tomato fruit development. ^@ Ikeda H.|||Kanahama K.|||Kanayama Y.|||Mohammed S.A.|||Nishio S.|||Shiratake K.|||Takahashi H.
http://togogenome.org/gene/4081:LOC543987 ^@ http://purl.uniprot.org/uniprot/Q01413 ^@ 1421154 ^@ Plant Mol. Biol. ^@ Differential accumulation of mRNAs encoding extracellular and intracellular PR proteins in tomato induced by virulent and avirulent races of Cladosporium fulvum. ^@ Joosten M.H.A.J.|||Wagemakers C.A.M.|||de Wit P.J.G.M.|||van Kan J.A.L.|||van den Berg-Velthuis G.C.M.
http://togogenome.org/gene/4081:MT3 ^@ http://purl.uniprot.org/uniprot/Q43512 ^@ 9687073 ^@ Plant Mol. Biol. ^@ Structure, expression and chromosomal localisation of the metallothionein-like gene family of tomato. ^@ Baumlein H.|||Ganal M.|||Giritch A.|||Stephan U.W.
http://togogenome.org/gene/4081:aos ^@ http://purl.uniprot.org/uniprot/K4BV52 ^@ 10759530|||12351632 ^@ J. Biol. Chem.|||Plant Physiol. ^@ Expression of allene oxide synthase determines defense gene activation in tomato.|||Identification of a jasmonate-regulated allene oxide synthase that metabolizes 9-hydroperoxides of linoleic and linolenic acids. ^@ Howe G.A.|||Itoh A.|||McCaig B.C.|||Rothstein S.J.|||Schilmiller A.L.|||Sheldrick B.|||Sivasankar S.
http://togogenome.org/gene/4081:ASH3 ^@ http://purl.uniprot.org/uniprot/A0A0U2RDY6 ^@ 26811191 ^@ Plant Physiol|||Plant Physiol. ^@ Acylsugar Acylhydrolases: Carboxylesterase-Catalyzed Hydrolysis of Acylsugars in Tomato Trichomes. ^@ Ghosh B.|||Gilgallon K.|||Jones A.D.|||Last R.L.|||Schilmiller A.L.
http://togogenome.org/gene/4081:LyesC2p041 ^@ http://purl.uniprot.org/uniprot/A0A0C5CEE1|||http://purl.uniprot.org/uniprot/Q2MI72 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LOC101264519 ^@ http://purl.uniprot.org/uniprot/K4BWZ9 ^@ 29186488 ^@ J Exp Bot|||J. Exp. Bot. ^@ A putative R3 MYB repressor is the candidate gene underlying atroviolacium, a locus for anthocyanin pigmentation in tomato fruit. ^@ Cao X.|||Du Y.|||Gao J.|||Guo Y.|||Huang Z.|||Liu X.|||Qiu Z.|||Van Giang T.|||Wang G.|||Wang J.|||Wang X.|||Wang X.'
http://togogenome.org/gene/4081:ProT2 ^@ http://purl.uniprot.org/uniprot/Q9XE49 ^@ 10072398 ^@ Plant Cell ^@ LeProT1, a transporter for proline, glycine betaine, and gamma-amino butyric acid in tomato pollen. ^@ Breitkreuz K.E.|||Frommer W.B.|||Grallath S.|||Rentsch D.|||Schwacke R.|||Stransky E.|||Stransky H.
http://togogenome.org/gene/4081:TBG2 ^@ http://purl.uniprot.org/uniprot/A2JGW9 ^@ 10889266 ^@ Plant Physiol|||Plant Physiol. ^@ A family of at least seven beta-galactosidase genes is expressed during tomato fruit development. ^@ Gross K.C.|||Smith D.L.
http://togogenome.org/gene/4081:SP5G ^@ http://purl.uniprot.org/uniprot/Q84XK9 ^@ 14682620 ^@ Plant Mol Biol|||Plant Mol. Biol. ^@ The SELF-PRUNING gene family in tomato. ^@ Carmel-Goren L.|||Lifschitz E.|||Liu Y.S.|||Zamir D.
http://togogenome.org/gene/4081:LOC543896 ^@ http://purl.uniprot.org/uniprot/Q69EZ9 ^@ 15618300 ^@ J Exp Bot|||J. Exp. Bot. ^@ Stress-responsive alpha-dioxygenase expression in tomato roots. ^@ Aung T.S.|||McKay A.B.|||Plant A.L.|||Tirajoh A.
http://togogenome.org/gene/4081:CYP85A3 ^@ http://purl.uniprot.org/uniprot/Q50LE0 ^@ 15710611 ^@ J. Biol. Chem. ^@ The last reaction producing brassinolide is catalyzed by cytochrome P-450s, CYP85A3 in tomato and CYP85A2 in Arabidopsis. ^@ Bishop G.J.|||Kamiya Y.|||Kushiro T.|||Nomura T.|||Yamaguchi S.|||Yokota T.
http://togogenome.org/gene/4081:XTH1 ^@ http://purl.uniprot.org/uniprot/Q40144 ^@ 8244968 ^@ J. Biol. Chem. ^@ Molecular cloning and cDNA sequencing of endoxyloglucan transferase, a novel class of glycosyltransferase that mediates molecular grafting between matrix polysaccharides in plant cell walls. ^@ Asada K.|||Kato I.|||Nakagawa T.|||Nishitani K.|||Okazawa K.|||Sato Y.|||Tomita E.
http://togogenome.org/gene/4081:AOS2 ^@ http://purl.uniprot.org/uniprot/Q9LLB0 ^@ 10859201|||11154338|||12351632|||12826630 ^@ J. Biol. Chem.|||Plant Cell Physiol.|||Plant Physiol. ^@ Cytochrome P450-dependent metabolism of oxylipins in tomato. Cloning and expression of allene oxide synthase and fatty acid hydroperoxide lyase.|||Enzymes of jasmonate biosynthesis occur in tomato sieve elements.|||Identification of a jasmonate-regulated allene oxide synthase that metabolizes 9-hydroperoxides of linoleic and linolenic acids.|||Tomato allene oxide synthase and fatty acid hydroperoxide lyase, two cytochrome P450s involved in oxylipin metabolism, are targeted to different membranes of chloroplast envelope. ^@ DeRocher A.E.|||Froehlich J.E.|||Hause B.|||Hause G.|||Howe G.A.|||Itoh A.|||Kutter C.|||Lee G.I.|||Li L.|||McCaig B.C.|||Miersch O.|||Schilmiller A.L.|||Wasternack C.
http://togogenome.org/gene/4081:LeNRT2.3 ^@ http://purl.uniprot.org/uniprot/Q93X79 ^@ 12010476 ^@ Physiol Plant|||Physiol. Plantarum ^@ Expression of nitrate transporter genes in tomato colonized by an arbuscular mycorrhizal fungus. ^@ Bothe H.|||Hildebrandt U.|||Schmelzer E.
http://togogenome.org/gene/4081:LOC101265051 ^@ http://purl.uniprot.org/uniprot/A0A1S6KM66 ^@ 27909045 ^@ Plant Physiol|||Plant Physiol. ^@ A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity. ^@ Chen X.|||Connor R.A.|||Gough J.|||Martin G.B.|||Mural R.V.|||Oates M.E.|||Zeng L.|||Zhou B.
http://togogenome.org/gene/4081:XYL1 ^@ http://purl.uniprot.org/uniprot/Q76MS5 ^@ 14585820 ^@ J Exp Bot|||J. Exp. Bot. ^@ Characterization of expression, and cloning, of beta-D-xylosidase and alpha-L-arabinofuranosidase in developing and ripening tomato (Lycopersicon esculentum Mill.) fruit. ^@ Bewley J.D.|||Ishihara K.|||Itai A.
http://togogenome.org/gene/4081:SUN ^@ http://purl.uniprot.org/uniprot/B1N669 ^@ 18339939 ^@ Science ^@ A retrotransposon-mediated gene duplication underlies morphological variation of tomato fruit. ^@ Jiang N.|||Schaffner E.|||Stockinger E.J.|||Xiao H.|||van der Knaap E.
http://togogenome.org/gene/4081:LOC101253992 ^@ http://purl.uniprot.org/uniprot/K4BND8 ^@ 28528644 ^@ Cell ^@ Bypassing negative epistasis on yield in tomato imposed by a domestication gene. ^@ Eshed Y.|||Fisher J.|||Goren A.|||Jiang K.|||Lemmon Z.H.|||Liberatore K.L.|||Lippman Z.B.|||Oved M.|||Park S.J.|||Ramos A.|||Soyk S.|||Van Eck J.|||Zamir D.|||van der Knaap E.
http://togogenome.org/gene/4081:LOC101251011 ^@ http://purl.uniprot.org/uniprot/K4CI56 ^@ 23757397 ^@ Plant Cell ^@ Evolution of a complex locus for terpene biosynthesis in Solanum. ^@ Barry C.S.|||Bolger A.M.|||Falara V.|||Fernie A.R.|||Gonzales-Vigil E.|||Kudrna D.|||Leong B.|||Matsuba Y.|||Nguyen T.T.|||Pichersky E.|||Schafer P.|||Tissier A.|||Usadel B.|||Wiegert K.|||Wing R.A.
http://togogenome.org/gene/4081:LOC101247669 ^@ http://purl.uniprot.org/uniprot/A0A0G3ZAU2 ^@ 26070456 ^@ BMC Plant Biol|||BMC Plant Biol. ^@ Tomato Sl3-MMP, a member of the Matrix metalloproteinase family, is required for disease resistance against Botrytis cinerea and Pseudomonas syringae pv. tomato DC3000. ^@ Hong Y.|||Huang L.|||Li D.|||Liu S.|||Song F.|||Song Q.|||Wang L.|||Zhang H.
http://togogenome.org/gene/4081:PSY2 ^@ http://purl.uniprot.org/uniprot/A9Q2P8 ^@ 18167141 ^@ FEBS J|||FEBS J. ^@ Phytoene synthase genes in tomato (Solanumlycopersicum L.) - new data on the structures, the deduced amino acid sequences and the expression patterns. ^@ D'Ambrosio C.|||Giorio G.|||Stigliani A.L.
http://togogenome.org/gene/4081:sig1 ^@ http://purl.uniprot.org/uniprot/Q9FR57 ^@ 11752381 ^@ Plant Cell ^@ Tomato SP-interacting proteins define a conserved signaling system that regulates shoot architecture and flowering. ^@ Adir N.|||Ben-Naim O.|||Gutfinger T.|||Hareven D.|||Lifschitz E.|||Pnueli L.|||Ron N.
http://togogenome.org/gene/4081:THM1 ^@ http://purl.uniprot.org/uniprot/Q43524 ^@ 8639738 ^@ Plant Mol Biol|||Plant Mol. Biol. ^@ Cloning and initial characterization of 14 myb-related cDNAs from tomato (Lycopersicon esculentum cv. Ailsa Craig). ^@ Hamilton W.D.|||Lin Q.|||Merryweather A.
http://togogenome.org/gene/4081:LyesC2p023 ^@ http://purl.uniprot.org/uniprot/A0A0C5CUU8|||http://purl.uniprot.org/uniprot/Q2MI54 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LOC543912 ^@ http://purl.uniprot.org/uniprot/Q6TAS3 ^@ 14745019 ^@ Proc. Natl. Acad. Sci. U.S.A. ^@ Folate synthesis in plants: the p-aminobenzoate branch is initiated by a bifunctional PabA-PabB protein that is targeted to plastids. ^@ Adams-Phillips L.C.|||Basset G.J.C.|||Giovannoni J.J.|||Gregory J.F.|||Hanson A.D.|||Nichols B.P.|||Quinlivan E.P.|||Ravanel S.|||Rebeille F.|||Seki M.|||Shinozaki K.
http://togogenome.org/gene/4081:LOC101248598 ^@ http://purl.uniprot.org/uniprot/K4CI65 ^@ 23757397 ^@ Plant Cell ^@ Evolution of a complex locus for terpene biosynthesis in Solanum. ^@ Barry C.S.|||Bolger A.M.|||Falara V.|||Fernie A.R.|||Gonzales-Vigil E.|||Kudrna D.|||Leong B.|||Matsuba Y.|||Nguyen T.T.|||Pichersky E.|||Schafer P.|||Tissier A.|||Usadel B.|||Wiegert K.|||Wing R.A.
http://togogenome.org/gene/4081:GGH1 ^@ http://purl.uniprot.org/uniprot/B2Z9Y3 ^@ 18757550 ^@ Plant Physiol|||Plant Physiol. ^@ Tomato gamma-glutamylhydrolases: expression, characterization, and evidence for heterodimer formation. ^@ Akhtar T.A.|||Giovannoni J.J.|||Gregory J.F.|||Gregory J.F.III.|||Hanson A.D.|||McQuinn R.P.|||Naponelli V.
http://togogenome.org/gene/4081:LOC101253509 ^@ http://purl.uniprot.org/uniprot/V5YNW3 ^@ 24260152 ^@ PLoS ONE|||PLoS One ^@ Genome-wide identification and expression analysis of aquaporins in tomato. ^@ Akiyama M.|||Aoki K.|||Mori C.|||Reuscher S.|||Shibata D.|||Shiratake K.
http://togogenome.org/gene/4081:SK ^@ http://purl.uniprot.org/uniprot/Q00497 ^@ 1338949 ^@ Plant J. ^@ The in-vitro synthesized tomato shikimate kinase precursor is enzymatically active and is imported and processed to the mature enzyme by chloroplasts. ^@ Amrhein N.|||Boll W.|||Leibinger U.|||Schaller A.|||Schmid J.
http://togogenome.org/gene/4081:LOC100529127 ^@ http://purl.uniprot.org/uniprot/E9NAZ8 ^@ 20439771|||21205670 ^@ Genetics|||Science ^@ A pollen factor linking inter- and intraspecific pollen rejection in tomato.|||Fine mapping of ui6.1, a gametophytic factor controlling pollen-side unilateral incompatibility in interspecific solanum hybrids. ^@ Chetelat R.T.|||Li W.|||Royer S.
http://togogenome.org/gene/4081:THT7-1 ^@ http://purl.uniprot.org/uniprot/Q8RXB7 ^@ 12900412 ^@ J Biol Chem|||J. Biol. Chem. ^@ p-Coumaroylnoradrenaline, a novel plant metabolite implicated in tomato defense against pathogens. ^@ Daniels M.J.|||Dow J.M.|||Hammond-Kosack K.E.|||Jones J.D.|||Lahaye T.|||Newman M.-A.|||Newman M.A.|||Schornack S.|||Von Roepenack-Lahaye E.|||von Roepenack-Lahaye E.
http://togogenome.org/gene/4081:LLP ^@ http://purl.uniprot.org/uniprot/E3WH16 ^@ 20826774 ^@ J Biol Chem|||J. Biol. Chem. ^@ FMN binding and photochemical properties of plant putative photoreceptors containing two LOV domains, LOV/LOV proteins. ^@ Fujita A.|||Kasahara M.|||Tainaka K.|||Torii M.
http://togogenome.org/gene/4081:LOC543983 ^@ http://purl.uniprot.org/uniprot/P25306 ^@ 16357201|||17416643|||2011578|||21436043|||23065106|||7550377 ^@ J. Chem. Ecol.|||Plant J.|||Plant Physiol.|||Proc. Natl. Acad. Sci. U.S.A. ^@ Adaptive evolution of threonine deaminase in plant defense against insect herbivores.|||Biosynthetic threonine deaminase gene of tomato: isolation, structure, and upregulation in floral organs.|||Caterpillar labial saliva alters tomato plant gene expression.|||Expression of an amino acid biosynthesis gene in tomato flowers: developmental upregulation and MeJa response are parenchyma-specific and mutually compatible.|||Jasmonate-inducible plant enzymes degrade essential amino acids in the herbivore midgut.|||Stability of plant defense proteins in the gut of insect herbivores. ^@ Bianchetti C.M.|||Broday L.|||Chen H.|||DesRochers B.L.|||Gonzales-Vigil E.|||Gutfinger T.|||Hareven D.|||Howe G.A.|||Hum-Musser S.M.|||Ken-Dror S.|||Kuchar J.A.|||Lee H.K.|||Lifschitz E.|||Musser R.O.|||Phillips G.N. Jr.|||Phinney B.S.|||Samach A.|||Vogel H.|||Wilkerson C.G.|||Williams S.A.
http://togogenome.org/gene/4081:CYP85A1 ^@ http://purl.uniprot.org/uniprot/Q0NZY6|||http://purl.uniprot.org/uniprot/Q0NZZ0|||http://purl.uniprot.org/uniprot/Q0NZZ1|||http://purl.uniprot.org/uniprot/Q43147 ^@ 11402205|||15710611|||15807787|||16687436|||8672892|||9990098 ^@ J Exp Bot|||J. Biol. Chem.|||J. Exp. Bot.|||Plant Cell|||Plant J.|||Plant Physiol.|||Proc. Natl. Acad. Sci. U.S.A. ^@ Brassinosteroid-6-oxidases from Arabidopsis and tomato catalyze multiple C-6 oxidations in brassinosteroid biosynthesis.|||Genetic and physiological characterization of tomato cv. Micro-Tom.|||Patterns of Dwarf expression and brassinosteroid accumulation in tomato reveal the importance of brassinosteroid synthesis during fruit development.|||The last reaction producing brassinolide is catalyzed by cytochrome P-450s, CYP85A3 in tomato and CYP85A2 in Arabidopsis.|||The tomato DWARF enzyme catalyses C-6 oxidation in brassinosteroid biosynthesis.|||The tomato Dwarf gene isolated by heterologous transposon tagging encodes the first member of a new cytochrome P450 family. ^@ Bishop G.J.|||Dixon M.S.|||Farrar K.|||Fujioka S.|||Garcia-Martinez J.L.|||Gisbert C.|||Harrison K.|||Jones J.D.|||Jones J.J.G.D.|||Kamiya Y.|||Kaneta T.|||Kushiro M.|||Kushiro T.|||Marti E.|||Miyauchi N.|||Montoya T.|||Noguchi T.|||Nomura T.|||Shimada Y.|||Szekeres M.|||Takatsuto S.|||Yamaguchi S.|||Yokota T.|||Yoshida S.
http://togogenome.org/gene/4081:LOC543548 ^@ http://purl.uniprot.org/uniprot/O65917 ^@ 11299368 ^@ Plant Physiol|||Plant Physiol. ^@ Molecular characterization of tomato 3-dehydroquinate dehydratase-shikimate:NADP oxidoreductase. ^@ Amrhein N.|||Bieri F.|||Bischoff M.|||Kessler F.|||Schaller A.|||Schmid J.
http://togogenome.org/gene/4081:KN1 ^@ http://purl.uniprot.org/uniprot/Q41330 ^@ 8625411 ^@ Cell ^@ The making of a compound leaf: genetic manipulation of leaf architecture in tomato. ^@ Eshed Y.|||Gutfinger T.|||Hareven D.|||Lifschitz E.|||Parnis A.
http://togogenome.org/gene/4081:TCP22 ^@ http://purl.uniprot.org/uniprot/G3BGW4 ^@ 24903607 ^@ BMC Plant Biol|||BMC Plant Biol. ^@ Identification, cloning and characterization of the tomato TCP transcription factor family. ^@ Angenent G.C.|||Bovy A.G.|||Busscher M.|||Busscher-Lange J.|||Karlova R.|||Lammers M.|||Parapunova V.|||de Maagd R.A.
http://togogenome.org/gene/4081:ARF19-1 ^@ http://purl.uniprot.org/uniprot/E3USC6 ^@ 21735233 ^@ Plant Cell Rep. ^@ Identification, isolation and expression analysis of auxin response factor (ARF) genes in Solanum lycopersicum. ^@ Cheng L.|||Kong F.|||Liu S.|||Lu G.|||Peng Z.|||Wang F.|||Wu J.|||Yu X.
http://togogenome.org/gene/4081:LyesC2p071 ^@ http://purl.uniprot.org/uniprot/A0A0C5CHD2|||http://purl.uniprot.org/uniprot/Q2MIA2 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LOC101252534 ^@ http://purl.uniprot.org/uniprot/K4D174 ^@ 24260152 ^@ PLoS ONE|||PLoS One ^@ Genome-wide identification and expression analysis of aquaporins in tomato. ^@ Akiyama M.|||Aoki K.|||Mori C.|||Reuscher S.|||Shibata D.|||Shiratake K.
http://togogenome.org/gene/4081:SUT2 ^@ http://purl.uniprot.org/uniprot/Q9FVL6 ^@ 10899981 ^@ Plant Cell ^@ SUT2, a putative sucrose sensor in sieve elements. ^@ Barker L.|||Frommer W.B.|||Gebhardt C.|||Hellmann H.|||Hirner B.|||Kuehn C.|||Schulz A.|||Schulze W.|||Ward J.M.|||Weise A.
http://togogenome.org/gene/4081:LyesC2p040 ^@ http://purl.uniprot.org/uniprot/A0A0U1ZGW4|||http://purl.uniprot.org/uniprot/Q2MI71 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:psbS ^@ http://purl.uniprot.org/uniprot/P54773 ^@ 7846177 ^@ Plant Physiol. ^@ Nucleotide sequence of a tomato psbS gene. ^@ Green B.R.|||Kim S.|||Pichersky E.|||Piechulla B.|||Wallbraun M.
http://togogenome.org/gene/4081:app1 ^@ http://purl.uniprot.org/uniprot/Q93X46 ^@ 11423553 ^@ J Biol Chem|||J. Biol. Chem. ^@ Cloning, expression, and characterization of tomato (Lycopersicon esculentum) aminopeptidase P. ^@ Hauser F.|||Haussner F.|||Schaller A.|||Strassner J.
http://togogenome.org/gene/4081:TMT2 ^@ http://purl.uniprot.org/uniprot/A0A060PVT8 ^@ 24833026 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ The sugar transporter inventory of tomato: genome-wide identification and expression analysis. ^@ Akiyama M.|||Aoki K.|||Koh A.|||Makino H.|||Reuscher S.|||Shibata D.|||Shiratake K.|||Yasuda T.
http://togogenome.org/gene/4081:LOC101055582 ^@ http://purl.uniprot.org/uniprot/I2E5L9 ^@ 22573803 ^@ Plant Physiol|||Plant Physiol. ^@ The beta-Subunit of the SnRK1 Complex Is Phosphorylated by the Plant Cell Death Suppressor Adi3.|||The beta-subunit of the SnRK1 complex is phosphorylated by the plant cell death suppressor Adi3. ^@ Avila J.|||Chen S.|||Deeter T.A.|||Devarenne T.P.|||Gregory O.G.|||Martin G.B.|||Silva-Sanchez C.|||Su D.|||Xu S.
http://togogenome.org/gene/4081:abz1 ^@ http://purl.uniprot.org/uniprot/Q6A1K9 ^@ 15560794 ^@ Eur J Biochem|||Eur. J. Biochem. ^@ Functional dissection of a small anaerobically induced bZIP transcription factor from tomato. ^@ Hehl R.|||Sell S.
http://togogenome.org/gene/4081:WRKY72 ^@ http://purl.uniprot.org/uniprot/A0A3Q7GFB5 ^@ 20409007|||24884371 ^@ BMC Genomics|||Plant J. ^@ RNA sequencing on Solanum lycopersicum trichomes identifies transcription factors that activate terpene synthase promoters.|||WRKY72-type transcription factors contribute to basal immunity in tomato and Arabidopsis as well as gene-for-gene resistance mediated by the tomato R gene Mi-1. ^@ Atamian H.S.|||Bhattarai K.K.|||Eulgem T.|||Haring M.A.|||Kaloshian I.|||Schuurink R.C.|||Spyropoulou E.A.
http://togogenome.org/gene/4081:MYC1 ^@ http://purl.uniprot.org/uniprot/A0A060KY90 ^@ 15231736|||24884371|||30518626 ^@ BMC Genomics|||Genes Dev.|||Plant Cell ^@ Conserved MYC transcription factors play a key role in jasmonate signaling both in tomato and Arabidopsis.|||RNA sequencing on Solanum lycopersicum trichomes identifies transcription factors that activate terpene synthase promoters.|||SlMYC1 regulates type VI glandular trichome formation and terpene biosynthesis in tomato glandular cells. ^@ Abdeen A.|||Boter M.|||Draeger D.B.|||Haring M.A.|||Prat S.|||Ruiz-Rivero O.|||Schuurink R.C.|||Spyropoulou E.A.|||Sui C.|||Xu J.|||van Herwijnen Z.O.
http://togogenome.org/gene/4081:LOC101263330 ^@ http://purl.uniprot.org/uniprot/Q6JN46 ^@ 15155877 ^@ Plant Cell ^@ The receptor for the fungal elicitor ethylene-inducing xylanase is a member of a resistance-like gene family in tomato. ^@ Avni A.|||Ron M.
http://togogenome.org/gene/4081:ORFX ^@ http://purl.uniprot.org/uniprot/Q9LKV7 ^@ 12242247 ^@ Genetics ^@ Comparative sequencing in the genus Lycopersicon. Implications for the evolution of fruit size in the domestication of cultivated tomatoes. ^@ Nesbitt T.C.|||Tanksley S.D.
http://togogenome.org/gene/4081:JJH3 ^@ http://purl.uniprot.org/uniprot/Q0H8T9 ^@ 18324417 ^@ Mol Genet Genomics|||Mol. Genet. Genomics ^@ Programmed cell death suppression in transformed plant tissue by tomato cDNAs identified from an Agrobacterium rhizogenes-based functional screen. ^@ Gilchrist D.G.|||Harvey J.J.|||Lincoln J.E.
http://togogenome.org/gene/4081:CDPK2 ^@ http://purl.uniprot.org/uniprot/E1CFU1 ^@ 20659278 ^@ Plant J|||Plant J. ^@ Turnover of LeACS2, a wound-inducible 1-aminocyclopropane-1-carboxylic acid synthase in tomato, is regulated by phosphorylation/dephosphorylation. ^@ Fukaya T.|||Iwata M.|||Kamiyoshihara Y.|||Mori H.|||Tatsuki M.
http://togogenome.org/gene/4081:PLDb1 ^@ http://purl.uniprot.org/uniprot/Q9AWB7 ^@ 11446372 ^@ Plant J|||Plant J. ^@ Characterization of five tomato phospholipase D cDNAs: rapid and specific expression of LePLDbeta1 on elicitation with xylanase. ^@ Haring M.|||Laxalt A.M.|||Munnik T.|||Musgrave A.|||Parigi L.|||Tameling W.I.|||Verdonk J.C.|||Vossen J.|||ter Riet B.
http://togogenome.org/gene/4081:AOS3 ^@ http://purl.uniprot.org/uniprot/Q8GZP5 ^@ 12351632|||17073790|||18780387|||18789329 ^@ Biochem. Soc. Trans.|||ChemBioChem|||FEBS Lett.|||J. Biol. Chem. ^@ CYP74C3 and CYP74A1, plant cytochrome P450 enzymes whose activity is regulated by detergent micelle association, and proposed new rules for the classification of CYP74 enzymes.|||Determinants governing the CYP74 catalysis: conversion of allene oxide synthase into hydroperoxide lyase by site-directed mutagenesis.|||Identification of a jasmonate-regulated allene oxide synthase that metabolizes 9-hydroperoxides of linoleic and linolenic acids.|||Tomato CYP74C3 is a multifunctional enzyme not only synthesizing allene oxide but also catalyzing its hydrolysis and cyclization. ^@ Belfield E.J.|||Casey R.|||Gogolev Y.|||Gogolev Y.V.|||Grechkin A.N.|||Hamberg M.|||Howe G.A.|||Hughes R.K.|||Itoh A.|||Latypova L.R.|||McCaig B.C.|||Mukhtarova L.S.|||Schilmiller A.L.|||Toporkova Y.Y.
http://togogenome.org/gene/4081:LOC101250138 ^@ http://purl.uniprot.org/uniprot/R9R6F3 ^@ 23757397 ^@ Plant Cell ^@ Evolution of a complex locus for terpene biosynthesis in Solanum. ^@ Barry C.S.|||Bolger A.M.|||Falara V.|||Fernie A.R.|||Gonzales-Vigil E.|||Kudrna D.|||Leong B.|||Matsuba Y.|||Nguyen T.T.|||Pichersky E.|||Schafer P.|||Tissier A.|||Usadel B.|||Wiegert K.|||Wing R.A.
http://togogenome.org/gene/4081:LOC101244817 ^@ http://purl.uniprot.org/uniprot/K4D043 ^@ 26248665 ^@ J Exp Bot|||J. Exp. Bot. ^@ L-type lectin receptor kinases in Nicotiana benthamiana and tomato and their role in Phytophthora resistance. ^@ Bouwmeester K.|||Govers F.|||Wang Y.|||Weide R.
http://togogenome.org/gene/4081:Dif54 ^@ http://purl.uniprot.org/uniprot/Q43505 ^@ 9349272 ^@ Plant Mol Biol|||Plant Mol. Biol. ^@ Two genes encoding extension-like proteins are predominantly expressed in tomato root hair cells. ^@ Bucher M.|||Riesmeier J.W.|||Schroeer B.|||Willmitzer L.
http://togogenome.org/gene/4081:LOC101252287 ^@ http://purl.uniprot.org/uniprot/K4C155 ^@ 27909045 ^@ Plant Physiol|||Plant Physiol. ^@ A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity. ^@ Chen X.|||Connor R.A.|||Gough J.|||Martin G.B.|||Mural R.V.|||Oates M.E.|||Zeng L.|||Zhou B.
http://togogenome.org/gene/4081:EXPA5 ^@ http://purl.uniprot.org/uniprot/Q9ZP31 ^@ 10080718 ^@ Plant Mol Biol|||Plant Mol. Biol. ^@ Differential expression of expansin gene family members during growth and ripening of tomato fruit. ^@ Brummell D.A.|||Dunsmuir P.|||Harpster M.H.
http://togogenome.org/gene/4081:Rbcs-3B ^@ http://purl.uniprot.org/uniprot/P05349 ^@ 3478552|||8425051 ^@ Mol. Gen. Genet.|||Plant Mol. Biol. ^@ Developmental and organ-specific changes in DNA-protein interactions in the tomato rbcS1, rbcS2 and rbcS3A promoter regions.|||Genomic organization, sequence analysis and expression of all five genes encoding the small subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase from tomato. ^@ Carrasco P.|||Cashmore A.|||Gruissem W.|||Manzara T.|||Pichersky E.|||Sugita M.
http://togogenome.org/gene/4081:HMG2 ^@ http://purl.uniprot.org/uniprot/P48022 ^@ 1391777|||8883384 ^@ Plant Mol. Biol.|||Plant Physiol. ^@ Structure and nucleotide sequence of tomato HMG2 encoding 3-hydroxy-3-methyl-glutaryl coenzyme A reductase.|||The promoter for tomato 3-hydroxy-3-methylglutaryl coenzyme A reductase gene 2 has unusual regulatory elements that direct high-level expression. ^@ Cramer C.L.|||Daraselia N.D.|||Denbow C.J.|||Narita J.O.|||Park H.S.|||Tarchevskaya S.
http://togogenome.org/gene/4081:LOC101268875 ^@ http://purl.uniprot.org/uniprot/A0A3Q7H1I0 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:DOT ^@ http://purl.uniprot.org/uniprot/B6CNU5|||http://purl.uniprot.org/uniprot/B6E0Z0 ^@ 18713949|||19018664 ^@ PLoS Biol|||PLoS Biol.|||Plant Cell ^@ Patterning of inflorescences and flowers by the F-Box protein DOUBLE TOP and the LEAFY homolog ABERRANT LEAF AND FLOWER of petunia.|||The making of a compound inflorescence in tomato and related nightshades. ^@ Abu-Abied M.|||Alvarez J.P.|||Bliek M.|||Cohen O.|||Eshed Y.|||Koes R.|||Kusters E.|||Lippman Z.B.|||Paran I.|||Pekker I.|||Rebocho A.B.|||Souer E.|||Zamir D.|||de Bruin R.A.
http://togogenome.org/gene/4081:IAA3 ^@ http://purl.uniprot.org/uniprot/G9HPV4 ^@ 22368074 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ Genome-Wide Identification, Functional Analysis and Expression Profiling of the Aux/IAA Gene Family in Tomato.|||Genome-wide identification, functional analysis and expression profiling of the Aux/IAA gene family in tomato. ^@ Audran-Delalande C.|||Bassa C.|||Bouzayen M.|||Mila I.|||Regad F.|||Zouine M.
http://togogenome.org/gene/4081:SFP4 ^@ http://purl.uniprot.org/uniprot/A0A060PPU9 ^@ 24833026 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ The sugar transporter inventory of tomato: genome-wide identification and expression analysis. ^@ Akiyama M.|||Aoki K.|||Koh A.|||Makino H.|||Reuscher S.|||Shibata D.|||Shiratake K.|||Yasuda T.
http://togogenome.org/gene/4081:LOC101260832 ^@ http://purl.uniprot.org/uniprot/K4CAD7 ^@ 27579028 ^@ Front Plant Sci|||Front. Plant Sci. ^@ Genome-Wide Study of the Tomato SlMLO Gene Family and Its Functional Characterization in Response to the Powdery Mildew Fungus Oidium neolycopersici. ^@ Appiano M.|||Bai Y.|||Bracuto V.|||Pavan S.|||Ricciardi L.|||Visser R.G.|||Wolters A.M.|||Zheng Z.
http://togogenome.org/gene/4081:LyesC2p076 ^@ http://purl.uniprot.org/uniprot/A0A0C5CHB4|||http://purl.uniprot.org/uniprot/Q2MIA7 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LOC101255293 ^@ http://purl.uniprot.org/uniprot/K4BWM1 ^@ 25249442 ^@ Nat. Commun. ^@ Resolution of deep angiosperm phylogeny using conserved nuclear genes and estimates of early divergence times. ^@ Kong H.|||Ma H.|||Sun R.|||Zeng L.|||Zhang N.|||Zhang Q.
http://togogenome.org/gene/4081:SlWRKY72b ^@ http://purl.uniprot.org/uniprot/D8VNC6 ^@ 20409007 ^@ Plant J. ^@ WRKY72-type transcription factors contribute to basal immunity in tomato and Arabidopsis as well as gene-for-gene resistance mediated by the tomato R gene Mi-1. ^@ Atamian H.S.|||Bhattarai K.K.|||Eulgem T.|||Kaloshian I.
http://togogenome.org/gene/4081:CHRDi ^@ http://purl.uniprot.org/uniprot/A0RZD0 ^@ 16845531 ^@ Planta ^@ CHRD, a plant member of the evolutionarily conserved YjgF family, influences photosynthesis and chromoplastogenesis. ^@ Leitner-Dagan Y.|||Ohad I.|||Ovadis M.|||Shklarman E.|||Tzfira T.|||Vainstein A.|||Zuker A.
http://togogenome.org/gene/4081:Wiv-1 ^@ http://purl.uniprot.org/uniprot/O82119|||http://purl.uniprot.org/uniprot/Q8LRN7|||http://purl.uniprot.org/uniprot/Q8LRN8 ^@ 12586884|||9794080 ^@ Genes Genet Syst|||Genes Genet. Syst.|||Plant Physiol|||Plant Physiol. ^@ Cloning of cDNA for a cell wall-bound acid invertase from tomato (Lycopersicon esculentum) and expression of soluble and cell wall-bound invertases in plants and wounded leaves of L. esculentum and L. peruvianum.|||Functional divergence of a syntenic invertase gene family in tomato, potato, and Arabidopsis. ^@ Fridman E.|||Hirai M.|||Nishimura S.|||Ohyama A.|||Zamir D.
http://togogenome.org/gene/4081:LOC101247747 ^@ http://purl.uniprot.org/uniprot/V5YNW6 ^@ 24260152 ^@ PLoS ONE|||PLoS One ^@ Genome-wide identification and expression analysis of aquaporins in tomato. ^@ Akiyama M.|||Aoki K.|||Mori C.|||Reuscher S.|||Shibata D.|||Shiratake K.
http://togogenome.org/gene/4081:MKS2b ^@ http://purl.uniprot.org/uniprot/E0YCS9 ^@ 20605911 ^@ Plant Physiol|||Plant Physiol. ^@ Enzymatic functions of wild tomato methylketone synthases 1 and 2. ^@ Auldridge M.E.|||Ben-Israel I.|||Bhuiyan N.|||Fridman E.|||Guo Y.|||Iijima Y.|||Nguyen T.T.|||Noel J.P.|||Pichersky E.|||Schauvinhold I.|||Yu G.
http://togogenome.org/gene/4081:LOC101253442 ^@ http://purl.uniprot.org/uniprot/Q9FYX1 ^@ 10908680 ^@ Proc Natl Acad Sci U S A|||Proc. Natl. Acad. Sci. U.S.A. ^@ Comparing sequenced segments of the tomato and Arabidopsis genomes: large-scale duplication followed by selective gene loss creates a network of synteny. ^@ Ku H.M.|||Liu J.|||Tanksley S.D.|||Vision T.
http://togogenome.org/gene/4081:SlArf/Xyl4 ^@ http://purl.uniprot.org/uniprot/H1AC33 ^@ 23782392 ^@ Physiol Plant|||Physiol. Plantarum ^@ Heterologous expression of tomato glycoside hydrolase family 3 ?-L-arabinofuranosidase/?-xylosidases in tobacco suspension cultured cells and synergic action of a family 51 isozyme under antisense suppression of the enzyme.|||Heterologous expression of tomato glycoside hydrolase family 3 alpha-L-arabinofuranosidase/beta-xylosidases in tobacco suspension cultured cells and synergic action of a family 51 isozyme under antisense suppression of the enzyme. ^@ Inoue H.|||Kamiyoshihara Y.|||Kanayama Y.|||Matsuno J.|||Miyohashi F.|||Nomura K.|||Shiba H.|||Tateishi A.|||Watanabe K.
http://togogenome.org/gene/4081:UBC1 ^@ http://purl.uniprot.org/uniprot/Q43780 ^@ 27909045|||9202147 ^@ FEBS Lett|||FEBS Lett.|||Plant Physiol|||Plant Physiol. ^@ A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity.|||Isolation of a cDNA coding for an ubiquitin-conjugating enzyme UBC1 of tomato--the first stress-induced UBC of higher plants. ^@ Chen X.|||Connor R.A.|||Feussner I.|||Feussner K.|||Gough J.|||Leopold I.|||Martin G.B.|||Mural R.V.|||Oates M.E.|||Wasternack C.|||Zeng L.|||Zhou B.
http://togogenome.org/gene/4081:LyesC2p031 ^@ http://purl.uniprot.org/uniprot/A0A0C5C9V4|||http://purl.uniprot.org/uniprot/Q2MI62 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:Cry3 ^@ http://purl.uniprot.org/uniprot/Q38JU2 ^@ 16876787 ^@ FEBS Lett. ^@ CRY-DASH gene expression is under the control of the circadian clock machinery in tomato. ^@ Bitonti M.B.|||Chiappetta A.|||Facella P.|||Giuliano G.|||Lopez L.|||Perrotta G.
http://togogenome.org/gene/4081:ubi3 ^@ http://purl.uniprot.org/uniprot/P62980 ^@ 1657246 ^@ Plant Mol. Biol. ^@ Isolation and characterization of tomato cDNA and genomic clones encoding the ubiquitin gene ubi3. ^@ Hoffman N.E.|||Ko K.|||Milkowski D.|||Pichersky E.
http://togogenome.org/gene/4081:RAN2A ^@ http://purl.uniprot.org/uniprot/P38547 ^@ 8016079 ^@ Proc. Natl. Acad. Sci. U.S.A. ^@ A small nuclear GTP-binding protein from tomato suppresses a Schizosaccharomyces pombe cell-cycle mutant. ^@ Ach R.A.|||Gruissem W.
http://togogenome.org/gene/4081:IAA4 ^@ http://purl.uniprot.org/uniprot/G9HPV5 ^@ 22368074 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ Genome-Wide Identification, Functional Analysis and Expression Profiling of the Aux/IAA Gene Family in Tomato.|||Genome-wide identification, functional analysis and expression profiling of the Aux/IAA gene family in tomato. ^@ Audran-Delalande C.|||Bassa C.|||Bouzayen M.|||Mila I.|||Regad F.|||Zouine M.
http://togogenome.org/gene/4081:eIF4E1 ^@ http://purl.uniprot.org/uniprot/Q4VQY3 ^@ 10915600|||15971038|||20593023|||22242134|||24309680|||26850324|||27655175|||32849681 ^@ Front. Plant Sci.|||Infect. Genet. Evol.|||J. Gen. Virol.|||Mol. Genet. Genomics|||PLoS ONE|||Plant J.|||Virology ^@ A TILLING approach to generate broad-spectrum resistance to potyviruses in tomato is hampered by eIF4E gene redundancy.|||A new eIF4E1 allele characterized by RNAseq data mining is associated with resistance to potato virus Y in tomato albeit with a low durability.|||An induced mutation in tomato eIF4E leads to immunity to two potyviruses.|||Evolution of plant eukaryotic initiation factor 4E (eIF4E) and potyvirus genome-linked protein (VPg): a game of mirrors impacting resistance spectrum and durability.|||Genome editing of eIF4E1 in tomato confers resistance to pepper mottle virus.|||Knock-down of both eIF4E1 and eIF4E2 genes confers broad-spectrum resistance against potyviruses in tomato.|||Strain-specific interaction of the tobacco etch virus NIa protein with the translation initiation factor eIF4E in the yeast two-hybrid system.|||The recessive potyvirus resistance gene pot-1 is the tomato orthologue of the pepper pvr2-eIF4E gene. ^@ Anderberg R.J.|||Bendahmane A.|||Bonnet G.|||Caranta C.|||Carrington J.C.|||Charron C.|||Constant C.|||Flamain F.|||Gallois J.-L.|||Gallois J.L.|||Gauffier C.|||German-Retana S.|||Janzac B.|||Kang B.-C.|||Kim D.-S.|||Kim J.|||Lebaron C.|||Lee H.-E.|||Lee J.-H.|||Lesage M.L.|||Mazier M.|||Minoia S.|||Moquet F.|||Moretti A.|||Moury B.|||Nicolai M.|||Palloix A.|||Piednoir E.|||Piron F.|||Rosado A.|||Ruffel S.|||Salgues A.|||Sarnette V.|||Sauvage C.|||Schaad M.C.|||Simon V.|||Venkatesh J.|||Yoon Y.-J.|||Zamir D.
http://togogenome.org/gene/4081:MAPK12 ^@ http://purl.uniprot.org/uniprot/F8UFC2 ^@ 22306326 ^@ Gene ^@ Genome-wide analysis of the mitogen-activated protein kinase gene family in Solanum lycopersicum. ^@ Cheng L.|||Kong F.|||Liu S.|||Lu G.|||Peng Z.|||Wang J.|||Wu J.
http://togogenome.org/gene/4081:ACS7B ^@ http://purl.uniprot.org/uniprot/O81143 ^@ 9707648 ^@ Proc Natl Acad Sci U S A|||Proc. Natl. Acad. Sci. U.S.A. ^@ The promoter of LE-ACS7, an early flooding-induced 1-aminocyclopropane-1-carboxylate synthase gene of the tomato, is tagged by a Sol3 transposon. ^@ Oetiker J.H.|||Shiu O.Y.|||Yang S.F.|||Yip W.K.
http://togogenome.org/gene/4081:AADC2 ^@ http://purl.uniprot.org/uniprot/Q1KSC4 ^@ 16698923 ^@ Proc Natl Acad Sci U S A|||Proc. Natl. Acad. Sci. U.S.A. ^@ Tomato aromatic amino acid decarboxylases participate in synthesis of the flavor volatiles 2-phenylethanol and 2-phenylacetaldehyde. ^@ Fernie A.R.|||Hanson A.D.|||Klee H.J.|||Schauer N.|||Taylor M.|||Tieman D.
http://togogenome.org/gene/4081:LOC101254620 ^@ http://purl.uniprot.org/uniprot/J7EN99 ^@ 22924438 ^@ New Phytol|||New Phytol. ^@ The tomato CAROTENOID CLEAVAGE DIOXYGENASE8 (SlCCD8) regulates rhizosphere signaling, plant architecture and affects reproductive development through strigolactone biosynthesis. ^@ Bouwmeester H.J.|||Charnikhova T.|||Haider I.|||Kohlen W.|||Lammers M.|||Lopez-Raez J.A.|||Pollina T.|||Pozo M.J.|||Ruyter-Spira C.|||Toth P.|||de Maagd R.A.
http://togogenome.org/gene/4081:LOC101258081 ^@ http://purl.uniprot.org/uniprot/A0A6H0JLZ2 ^@ 31943222 ^@ New Phytol|||New Phytol. ^@ The complete functional characterisation of the terpene synthase family in tomato. ^@ Pichersky E.|||Zhou F.
http://togogenome.org/gene/4081:LOC101263224 ^@ http://purl.uniprot.org/uniprot/B1N679 ^@ 18339939 ^@ Science ^@ A retrotransposon-mediated gene duplication underlies morphological variation of tomato fruit. ^@ Jiang N.|||Schaffner E.|||Stockinger E.J.|||Xiao H.|||van der Knaap E.
http://togogenome.org/gene/4081:PIN9 ^@ http://purl.uniprot.org/uniprot/D6RT09 ^@ 22211518 ^@ Plant J|||Plant J. ^@ Evaluating auxin distribution in tomato (Solanum lycopersicum) through an analysis of the PIN and AUX/LAX gene families. ^@ Catala C.|||Pattison R.J.
http://togogenome.org/gene/4081:CycA1 ^@ http://purl.uniprot.org/uniprot/Q9XGI5 ^@ 10987563 ^@ Planta ^@ Molecular characterization of the expression of distinct classes of cyclins during the early development of tomato fruit. ^@ Chevalier C.|||Joubes J.|||Raymond P.|||Walsh D.
http://togogenome.org/gene/4081:LyesC2p054 ^@ http://purl.uniprot.org/uniprot/Q2A7F4 ^@ 16575560|||16830097 ^@ J. Mol. Evol.|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.
http://togogenome.org/gene/4081:Cel2 ^@ http://purl.uniprot.org/uniprot/Q42872 ^@ 7994180 ^@ Plant Cell ^@ Two divergent endo-beta-1,4-glucanase genes exhibit overlapping expression in ripening fruit and abscising flowers. ^@ Bennett A.B.|||Gonzalez-Bosch C.|||Lashbrook C.C.
http://togogenome.org/gene/4081:GAME3 ^@ http://purl.uniprot.org/uniprot/E5L3R9 ^@ 22180624 ^@ Plant Cell ^@ GLYCOALKALOID METABOLISM1 Is Required for Steroidal Alkaloid Glycosylation and Prevention of Phytotoxicity in Tomato.|||GLYCOALKALOID METABOLISM1 is required for steroidal alkaloid glycosylation and prevention of phytotoxicity in tomato. ^@ Aharoni A.|||Alkan N.|||Aoki K.|||Beekwilder J.|||Burdman S.|||Iijima Y.|||Itkin M.|||Malitsky S.|||Masini L.|||Meir S.|||Prusky D.|||Rogachev I.|||Rosenberg T.|||de Vos R.
http://togogenome.org/gene/4081:SlATG8a ^@ http://purl.uniprot.org/uniprot/F1JYZ5 ^@ 21867679 ^@ Biochem Biophys Res Commun|||Biochem. Biophys. Res. Commun. ^@ The plant cell death suppressor Adi3 interacts with the autophagic protein Atg8h. ^@ Devarenne T.P.
http://togogenome.org/gene/4081:formin-I2I ^@ http://purl.uniprot.org/uniprot/G8IRK0 ^@ 22345637 ^@ J Exp Bot|||J. Exp. Bot. ^@ Protein-protein interactions as a proxy to monitor conformational changes and activation states of the tomato resistance protein I-2. ^@ Cornelissen B.J.|||Lukasik-Shreepaathy E.|||Takken F.L.|||Tameling W.I.|||Vossen J.H.|||de Vroomen M.J.
http://togogenome.org/gene/4081:MAPKKKe ^@ http://purl.uniprot.org/uniprot/E2DS92 ^@ 21049563 ^@ Plant J|||Plant J. ^@ Tomato MAPKKK? is a positive regulator of cell-death signaling networks associated with plant immunity.|||Tomato MAPKKKepsilon is a positive regulator of cell-death signaling networks associated with plant immunity. ^@ Melech-Bonfil S.|||Sessa G.
http://togogenome.org/gene/4081:CYP707A1 ^@ http://purl.uniprot.org/uniprot/A9QNE7 ^@ 19322584|||25039074 ^@ J. Exp. Bot.|||Planta ^@ Abscisic acid levels in tomato ovaries are regulated by LeNCED1 and SlCYP707A1.|||SlNCED1 and SlCYP707A2: key genes involved in ABA metabolism during tomato fruit ripening. ^@ Chen P.|||Dai S.|||Feron R.|||Guo Y.|||Hedden P.|||Ji K.|||Kai W.|||Leng P.|||Li Q.|||Ma Q.|||Mariani C.|||Nitsch L.M.|||Oplaat C.|||Pei Y.|||Sun Y.|||Vriezen W.H.|||Wang H.|||Wang Y.|||Wolters-Arts M.|||Yuan B.|||Zhao B.
http://togogenome.org/gene/4081:LOC100736534 ^@ http://purl.uniprot.org/uniprot/F6KQN2 ^@ 21398570 ^@ Plant Cell ^@ Transcriptome and Metabolite Profiling Show That APETALA2a Is a Major Regulator of Tomato Fruit Ripening.|||Transcriptome and metabolite profiling show that APETALA2a is a major regulator of tomato fruit ripening. ^@ Angenent G.C.|||Baxter C.|||Busscher-Lange J.|||Do P.T.|||Fernie A.R.|||Fraser P.D.|||Karlova R.|||Parapunova V.|||Rosin F.M.|||de Maagd R.A.
http://togogenome.org/gene/4081:opr2 ^@ http://purl.uniprot.org/uniprot/Q9FEX0 ^@ 12445129 ^@ Plant J. ^@ Characterization and cDNA-microarray expression analysis of 12-oxophytodienoate reductases reveals differential roles for octadecanoid biosynthesis in the local versus the systemic wound response. ^@ Amrhein N.|||Frick U.B.|||Howe G.A.|||Macheroux P.|||Schaller A.|||Schaller F.|||Strassner J.|||Weiler E.W.
http://togogenome.org/gene/4081:SLBRC1b ^@ http://purl.uniprot.org/uniprot/F6KB99|||http://purl.uniprot.org/uniprot/G3BGU8 ^@ 21554455|||24903607 ^@ BMC Plant Biol|||BMC Plant Biol.|||Plant J|||Plant J. ^@ Identification, cloning and characterization of the tomato TCP transcription factor family.|||Role of tomato BRANCHED1-like genes in the control of shoot branching. ^@ Angenent G.C.|||Bendahmane A.|||Bovy A.G.|||Busscher M.|||Busscher-Lange J.|||Cubas P.|||Dopazo H.|||Grandio E.G.|||Karlova R.|||Lammers M.|||Marcel F.|||Martin-Trillo M.|||Parapunova V.|||Rodriguez-Buey M.L.|||Schmitz G.|||Serra F.|||Theres K.|||de Maagd R.A.
http://togogenome.org/gene/4081:ACI29 ^@ http://purl.uniprot.org/uniprot/Q3SC85 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:FRO1 ^@ http://purl.uniprot.org/uniprot/Q6EMC0 ^@ 15159639 ^@ Plant Mol Biol|||Plant Mol. Biol. ^@ Isolation and characterization of Fe(III)-chelate reductase gene LeFRO1 in tomato. ^@ Cheng X.|||Li L.|||Ling H.Q.
http://togogenome.org/gene/4081:tXET-B1 ^@ http://purl.uniprot.org/uniprot/Q43527 ^@ 7632911 ^@ Plant Mol. Biol. ^@ Characterisation of two tomato fruit-expressed cDNAs encoding xyloglucan endo-transglycosylase. ^@ Arrowsmith D.A.|||De Silva J.
http://togogenome.org/gene/4081:DCL ^@ http://purl.uniprot.org/uniprot/Q42463 ^@ 15010617|||8861949 ^@ EMBO J.|||Plant Mol. Biol. ^@ DCL is a plant-specific protein required for plastid ribosomal RNA processing and embryo development.|||The DCL gene of tomato is required for chloroplast development and palisade cell morphogenesis in leaves. ^@ Bellaoui M.|||Carroll B.|||Gruissem W.|||Jones J.D.G.|||Keddie J.S.
http://togogenome.org/gene/4081:LOC543898 ^@ http://purl.uniprot.org/uniprot/Q6V7U9 ^@ 12897245 ^@ Plant Cell ^@ Activation tagging in tomato identifies a transcriptional regulator of anthocyanin biosynthesis, modification, and transport. ^@ Caldwell C.G.|||Clendennen S.K.|||Connors K.|||Lightner J.|||Liu X.L.|||Matheis N.|||Mathews H.|||Menasco D.J.|||Schuster D.K.|||Wagner D.R.|||Wagoner W.
http://togogenome.org/gene/4081:LOC101264240 ^@ http://purl.uniprot.org/uniprot/K4B017 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:SlCKX2 ^@ http://purl.uniprot.org/uniprot/I0IUQ6 ^@ 22865911 ^@ J Exp Bot|||J. Exp. Bot. ^@ Roles and regulation of cytokinins in tomato fruit development. ^@ Fukuda M.|||Honda I.|||Imanishi S.|||Kikuchi K.|||Matsuo S.
http://togogenome.org/gene/4081:LOC101264605 ^@ http://purl.uniprot.org/uniprot/V5YM48 ^@ 24260152 ^@ PLoS ONE|||PLoS One ^@ Genome-wide identification and expression analysis of aquaporins in tomato. ^@ Akiyama M.|||Aoki K.|||Mori C.|||Reuscher S.|||Shibata D.|||Shiratake K.
http://togogenome.org/gene/4081:LOC543596 ^@ http://purl.uniprot.org/uniprot/Q9LDJ5 ^@ 10809448 ^@ Plant Mol Biol|||Plant Mol. Biol. ^@ Tomato contains homologues of Arabidopsis cryptochromes 1 and 2. ^@ Flamma F.|||Giuliano G.|||Kendrick R.E.|||Nebuloso E.|||Ninu L.|||Perrotta G.|||Weller J.L.
http://togogenome.org/gene/4081:SlEOT2 ^@ http://purl.uniprot.org/uniprot/U5L363 ^@ 24142382 ^@ Plant Mol. Biol. ^@ Expression of Terpenoids 1, a glandular trichome-specific transcription factor from tomato that activates the terpene synthase 5 promoter. ^@ Haring M.A.|||Schuurink R.C.|||Spyropoulou E.A.
http://togogenome.org/gene/4081:CrtR-b2 ^@ http://purl.uniprot.org/uniprot/Q0GGX1 ^@ 20383744 ^@ Transgenic Res|||Transgenic Res. ^@ Overexpression of CrtR-b2 (carotene beta hydroxylase 2) from S. lycopersicum L. differentially affects xanthophyll synthesis and accumulation in transgenic tomato plants. ^@ D'Ambrosio C.|||Giorio G.|||Stigliani A.L.
http://togogenome.org/gene/4081:SBT1 ^@ http://purl.uniprot.org/uniprot/P93204 ^@ 10350089|||10671566 ^@ J Biol Chem|||J. Biol. Chem.|||Plant Mol. Biol. ^@ Characterization of the subtilase gene family in tomato (Lycopersicon esculentum Mill.).|||LeSBT1, a subtilase from tomato plants. Overexpression in insect cells, purification, and characterization. ^@ Amrhein N.|||Janzik I.|||Macheroux P.|||Meichtry J.|||Schaller A.
http://togogenome.org/gene/4081:CPS ^@ http://purl.uniprot.org/uniprot/G5CV38 ^@ 21813655 ^@ Plant Physiol. ^@ The tomato terpene synthase gene family. ^@ Akhtar T.A.|||Bleeker P.M.|||Bonini M.E.|||Falara V.|||Last R.L.|||Matsuba Y.|||Nguyen T.T.|||Nguyen T.T.H.|||Pichersky E.|||Schauvinhold I.|||Schilmiller A.L.|||Schuurink R.C.|||Spyropoulou E.A.
http://togogenome.org/gene/4081:TMT1 ^@ http://purl.uniprot.org/uniprot/K4BFH5 ^@ 24833026 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ The sugar transporter inventory of tomato: genome-wide identification and expression analysis. ^@ Akiyama M.|||Aoki K.|||Koh A.|||Makino H.|||Reuscher S.|||Shibata D.|||Shiratake K.|||Yasuda T.
http://togogenome.org/gene/4081:TCP3 ^@ http://purl.uniprot.org/uniprot/A2I5C9 ^@ 17486095|||24903607 ^@ BMC Plant Biol|||BMC Plant Biol.|||Nat Genet|||Nat. Genet. ^@ Identification, cloning and characterization of the tomato TCP transcription factor family.|||Regulation of LANCEOLATE by miR319 is required for compound-leaf development in tomato. ^@ Alvarez J.P.|||Amsellem Z.|||Angenent G.C.|||Blum E.|||Bovy A.G.|||Brand A.|||Busscher M.|||Busscher-Lange J.|||Cohen A.R.|||Efroni I.|||Eshed Y.|||Etzioni A.|||Karlova R.|||Lammers M.|||Menda N.|||Ori N.|||Parapunova V.|||Pekker I.|||Shleizer S.|||Yanai O.|||Zamir D.|||de Maagd R.A.
http://togogenome.org/gene/4081:FUL2 ^@ http://purl.uniprot.org/uniprot/Q7XBM0 ^@ 14573491 ^@ Genetics ^@ Duplication and diversification in the APETALA1/FRUITFULL floral homeotic gene lineage: implications for the evolution of floral development. ^@ Irish V.F.|||Litt A.
http://togogenome.org/gene/4081:LOC101250446 ^@ http://purl.uniprot.org/uniprot/K4CYU9 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:LOC101251641 ^@ http://purl.uniprot.org/uniprot/Q9FYW2 ^@ 10908680 ^@ Proc Natl Acad Sci U S A|||Proc. Natl. Acad. Sci. U.S.A. ^@ Comparing sequenced segments of the tomato and Arabidopsis genomes: large-scale duplication followed by selective gene loss creates a network of synteny. ^@ Ku H.M.|||Liu J.|||Tanksley S.D.|||Vision T.
http://togogenome.org/gene/4081:UBC ^@ http://purl.uniprot.org/uniprot/Q42897 ^@ 27909045|||8290646 ^@ Plant Physiol|||Plant Physiol. ^@ A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity.|||Sequence of a cloned tomato ubiquitin conjugating enzyme. ^@ Barton S.L.|||Chen X.|||Connor R.A.|||Gough J.|||Gray J.E.|||Grierson D.|||Lowe A.|||Martin G.B.|||Mural R.V.|||Oates M.E.|||Picton S.|||Zeng L.|||Zhou B.
http://togogenome.org/gene/4081:LAT52 ^@ http://purl.uniprot.org/uniprot/P13447 ^@ 2770694 ^@ Mol. Gen. Genet. ^@ Isolation and expression of an anther-specific gene from tomato. ^@ McCormick S.|||Twell D.|||Wing R.|||Yamaguchi J.
http://togogenome.org/gene/4081:ARF19 ^@ http://purl.uniprot.org/uniprot/D9IA29 ^@ 21735233 ^@ Plant Cell Rep. ^@ Identification, isolation and expression analysis of auxin response factor (ARF) genes in Solanum lycopersicum. ^@ Cheng L.|||Kong F.|||Liu S.|||Lu G.|||Peng Z.|||Wang F.|||Wu J.|||Yu X.
http://togogenome.org/gene/4081:SlCKX4 ^@ http://purl.uniprot.org/uniprot/I0IUQ7 ^@ 22865911 ^@ J Exp Bot|||J. Exp. Bot. ^@ Roles and regulation of cytokinins in tomato fruit development. ^@ Fukuda M.|||Honda I.|||Imanishi S.|||Kikuchi K.|||Matsuo S.
http://togogenome.org/gene/4081:LOC100037737 ^@ http://purl.uniprot.org/uniprot/A0FKE6 ^@ 17416643|||21436043 ^@ Plant Physiol.|||Proc. Natl. Acad. Sci. U.S.A. ^@ Adaptive evolution of threonine deaminase in plant defense against insect herbivores.|||Stability of plant defense proteins in the gut of insect herbivores. ^@ Bianchetti C.M.|||Chen H.|||Gonzales-Vigil E.|||Howe G.A.|||Phillips G.N. Jr.|||Wilkerson C.G.
http://togogenome.org/gene/4081:CycB2 ^@ http://purl.uniprot.org/uniprot/Q9XGI1 ^@ 10987563 ^@ Planta ^@ Molecular characterization of the expression of distinct classes of cyclins during the early development of tomato fruit. ^@ Chevalier C.|||Joubes J.|||Raymond P.|||Walsh D.
http://togogenome.org/gene/4081:LOC100529103 ^@ http://purl.uniprot.org/uniprot/D3TI69 ^@ 20133661 ^@ Proc Natl Acad Sci U S A|||Proc. Natl. Acad. Sci. U.S.A. ^@ Enhancement of fruit shelf life by suppressing N-glycan processing enzymes. ^@ Chakraborty N.|||Chakraborty S.|||Datta A.|||Ghosh S.|||Meli V.S.|||Prabha T.N.
http://togogenome.org/gene/4081:LOC101251264 ^@ http://purl.uniprot.org/uniprot/K4CYU9 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:CBF1 ^@ http://purl.uniprot.org/uniprot/Q8S9N5 ^@ 11706173 ^@ Plant Physiol. ^@ Components of the Arabidopsis C-repeat/dehydration-responsive element binding factor cold-response pathway are conserved in Brassica napus and other plant species. ^@ Amundsen K.L.|||Deits T.|||Haake V.|||Jaglo K.R.|||Kleff S.|||Thomashow M.F.|||Zhang J.Z.|||Zhang X.
http://togogenome.org/gene/4081:LOC101249087 ^@ http://purl.uniprot.org/uniprot/B7U4A4 ^@ 19445598|||27909045 ^@ Mol Plant Microbe Interact|||Mol. Plant Microbe Interact.|||Plant Physiol|||Plant Physiol. ^@ A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity.|||Interaction with a host ubiquitin-conjugating enzyme is required for the pathogenicity of a geminiviral DNA beta satellite. ^@ Chen X.|||Connor R.A.|||Dogra S.|||Dry I.B.|||Eini O.|||Gough J.|||Martin G.B.|||Mural R.V.|||Oates M.E.|||Randles J.W.|||Rezaian M.A.|||Selth L.A.|||Zeng L.|||Zhou B.
http://togogenome.org/gene/4081:MYB ^@ http://purl.uniprot.org/uniprot/Q40174 ^@ 8639738 ^@ Plant Mol Biol|||Plant Mol. Biol. ^@ Cloning and initial characterization of 14 myb-related cDNAs from tomato (Lycopersicon esculentum cv. Ailsa Craig). ^@ Hamilton W.D.|||Lin Q.|||Merryweather A.
http://togogenome.org/gene/4081:krp1 ^@ http://purl.uniprot.org/uniprot/Q8GT29 ^@ 16407228 ^@ J Biol Chem|||J. Biol. Chem. ^@ Cyclin-dependent kinase (CDK) inhibitors regulate the CDK-cyclin complex activities in endoreduplicating cells of developing tomato fruit. ^@ Bisbis B.|||Chevalier C.|||Delmas F.|||Hernould M.|||Inze D.|||Joubes J.|||Mouras A.|||Sicard A.
http://togogenome.org/gene/4081:LCY1 ^@ http://purl.uniprot.org/uniprot/Q43503 ^@ 8624411 ^@ Plant Mol. Biol. ^@ Cloning and characterization of the cDNA for lycopene beta-cyclase from tomato reveals decrease in its expression during fruit ripening. ^@ Cunningham F.X. Jr.|||Gabbay R.|||Hirschberg J.|||Pecker I.
http://togogenome.org/gene/4081:LOC101259162 ^@ http://purl.uniprot.org/uniprot/A0A3Q7HQH0 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:MKS1b ^@ http://purl.uniprot.org/uniprot/E0YCS5 ^@ 20605911 ^@ Plant Physiol|||Plant Physiol. ^@ Enzymatic functions of wild tomato methylketone synthases 1 and 2. ^@ Auldridge M.E.|||Ben-Israel I.|||Bhuiyan N.|||Fridman E.|||Guo Y.|||Iijima Y.|||Nguyen T.T.|||Noel J.P.|||Pichersky E.|||Schauvinhold I.|||Yu G.
http://togogenome.org/gene/4081:LyesC2p032 ^@ http://purl.uniprot.org/uniprot/A0A0C5CUU1|||http://purl.uniprot.org/uniprot/Q2MI63 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LEMT1 ^@ http://purl.uniprot.org/uniprot/Q40158 ^@ 9687073 ^@ Plant Mol. Biol. ^@ Structure, expression and chromosomal localisation of the metallothionein-like gene family of tomato. ^@ Baumlein H.|||Ganal M.|||Giritch A.|||Stephan U.W.
http://togogenome.org/gene/4081:LOC101259809 ^@ http://purl.uniprot.org/uniprot/A0A3Q7F9U0 ^@ 32167545 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ A Group of O-Acetyltransferases Catalyze Xyloglucan Backbone Acetylation and Can Alter Xyloglucan Xylosylation Pattern and Plant Growth When Expressed in Arabidopsis.|||A group of O-acetyltransferases catalyze xyloglucan backbone acetylation and can alter xyloglucan xylosylation pattern and plant growth when expressed in Arabidopsis. ^@ Cui D.|||Phillips D.R.|||Richardson E.A.|||Ye Z.H.|||Zhong R.
http://togogenome.org/gene/4081:LOC101266399 ^@ http://purl.uniprot.org/uniprot/A0A3Q7FJL7 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:MPK3 ^@ http://purl.uniprot.org/uniprot/Q84MI4 ^@ 12913131 ^@ Plant Physiol|||Plant Physiol. ^@ Convergence of signaling pathways induced by systemin, oligosaccharide elicitors, and ultraviolet-B radiation at the level of mitogen-activated protein kinases in Lycopersicon peruvianum suspension-cultured cells. ^@ Holley S.R.|||Moura D.S.|||Ryan C.A.|||Stratmann J.W.|||Yalamanchili R.D.
http://togogenome.org/gene/4081:ACI39 ^@ http://purl.uniprot.org/uniprot/K4CYU9 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:GGPS1 ^@ http://purl.uniprot.org/uniprot/Q1A7T0 ^@ 16786318 ^@ Planta ^@ Induction of a leaf specific geranylgeranyl pyrophosphate synthase and emission of (E,E)-4,8,12-trimethyltrideca-1,3,7,11-tetraene in tomato are dependent on both jasmonic acid and salicylic acid signaling pathways. ^@ Ament K.|||Bouwmeester H.J.|||Haring M.A.|||Schuurink R.C.|||Van Schie C.C.
http://togogenome.org/gene/4081:LOC101266690 ^@ http://purl.uniprot.org/uniprot/A0A3Q7IVL4 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:PIN5 ^@ http://purl.uniprot.org/uniprot/E5KGD6 ^@ 22211518 ^@ Plant J|||Plant J. ^@ Evaluating auxin distribution in tomato (Solanum lycopersicum) through an analysis of the PIN and AUX/LAX gene families. ^@ Catala C.|||Pattison R.J.
http://togogenome.org/gene/4081:MT2 ^@ http://purl.uniprot.org/uniprot/Q43515 ^@ 9687073 ^@ Plant Mol. Biol. ^@ Structure, expression and chromosomal localisation of the metallothionein-like gene family of tomato. ^@ Baumlein H.|||Ganal M.|||Giritch A.|||Stephan U.W.
http://togogenome.org/gene/4081:CIP4 ^@ http://purl.uniprot.org/uniprot/Q2VY15 ^@ 16623906 ^@ Plant J|||Plant J. ^@ The CCAAT binding factor can mediate interactions between CONSTANS-like proteins and DNA. ^@ Ben-Naim O.|||Coupland G.|||Eshed R.|||Lifschitz E.|||Parnis A.|||Samach A.|||Shalit A.|||Teper-Bamnolker P.
http://togogenome.org/gene/4081:IMP2 ^@ http://purl.uniprot.org/uniprot/P54927 ^@ 14729261|||8718627 ^@ Gene|||Plant Cell ^@ Genomic organization and regulation of the LeIMP-1 and LeIMP-2 genes encoding myo-inositol monophosphatase in tomato.|||Plant inositol monophosphatase is a lithium-sensitive enzyme encoded by a multigene family. ^@ Gillaspy G.E.|||Gruissem W.|||Keddie J.|||Keddie J.S.|||Oda K.|||Spence J.|||Styer J.C.
http://togogenome.org/gene/4081:ETR2 ^@ http://purl.uniprot.org/uniprot/O49187 ^@ 9721682 ^@ Plant J. ^@ Differential regulation of the tomato ETR gene family throughout plant development. ^@ Klee H.J.|||Lashbrook C.C.|||Tieman D.M.
http://togogenome.org/gene/4081:NSGT1 ^@ http://purl.uniprot.org/uniprot/R9WSW7 ^@ 23956261 ^@ Plant Cell ^@ NON-SMOKY GLYCOSYLTRANSFERASE1 Prevents the Release of Smoky Aroma from Tomato Fruit.|||Non-smoky glycosyltransferase1 prevents the release of smoky aroma from tomato fruit. ^@ Beekwilder J.|||Bovy A.G.|||Granell A.|||Hall R.D.|||Labrie C.W.|||Molthoff J.|||Nijenhuis-de Vries M.|||Presa S.|||Rambla J.L.|||Tikunov Y.M.|||Verkerke W.|||Viquez Zamora M.|||de Vos R.C.|||van Houwelingen A.|||van de Geest H.|||van der Hooft J.J.
http://togogenome.org/gene/4081:PRK3 ^@ http://purl.uniprot.org/uniprot/Q9AUC3 ^@ 12139002 ^@ Plant Mol. Biol. ^@ New pollen-specific receptor kinases identified in tomato, maize and Arabidopsis: the tomato kinases show overlapping but distinct localization patterns on pollen tubes. ^@ Cotter R.|||Dodds P.|||Ezcura I.|||Herzmark P.|||Johnson S.|||Kim H.U.|||Kulikauska R.|||McCormick S.|||Senda M.|||Tang W.
http://togogenome.org/gene/4081:TCP17 ^@ http://purl.uniprot.org/uniprot/G3BGV7 ^@ 24903607 ^@ BMC Plant Biol|||BMC Plant Biol. ^@ Identification, cloning and characterization of the tomato TCP transcription factor family. ^@ Angenent G.C.|||Bovy A.G.|||Busscher M.|||Busscher-Lange J.|||Karlova R.|||Lammers M.|||Parapunova V.|||de Maagd R.A.
http://togogenome.org/gene/4081:LOC101252131 ^@ http://purl.uniprot.org/uniprot/K4D3L7 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:TCP15 ^@ http://purl.uniprot.org/uniprot/G3BGV5 ^@ 24903607 ^@ BMC Plant Biol|||BMC Plant Biol. ^@ Identification, cloning and characterization of the tomato TCP transcription factor family. ^@ Angenent G.C.|||Bovy A.G.|||Busscher M.|||Busscher-Lange J.|||Karlova R.|||Lammers M.|||Parapunova V.|||de Maagd R.A.
http://togogenome.org/gene/4081:LOC101055549 ^@ http://purl.uniprot.org/uniprot/G9HPW6 ^@ 22368074 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ Genome-Wide Identification, Functional Analysis and Expression Profiling of the Aux/IAA Gene Family in Tomato.|||Genome-wide identification, functional analysis and expression profiling of the Aux/IAA gene family in tomato. ^@ Audran-Delalande C.|||Bassa C.|||Bouzayen M.|||Mila I.|||Regad F.|||Zouine M.
http://togogenome.org/gene/4081:LOC101244430 ^@ http://purl.uniprot.org/uniprot/K4D291 ^@ 24260152 ^@ PLoS ONE|||PLoS One ^@ Genome-wide identification and expression analysis of aquaporins in tomato. ^@ Akiyama M.|||Aoki K.|||Mori C.|||Reuscher S.|||Shibata D.|||Shiratake K.
http://togogenome.org/gene/4081:CAB1B ^@ http://purl.uniprot.org/uniprot/P07370 ^@ 3007291 ^@ Gene ^@ Molecular characterization and genetic mapping of two clusters of genes encoding chlorophyll a/b-binding proteins in Lycopersicon esculentum (tomato). ^@ Bernatzky R.|||Breidenbach R.B.|||Cashmore A.R.|||Kausch A.P.|||Pichersky E.|||Tanksley S.D.
http://togogenome.org/gene/4081:cycD3 ^@ http://purl.uniprot.org/uniprot/Q9S7H9 ^@ 10987563|||11113158 ^@ J Exp Bot|||J. Exp. Bot.|||Planta ^@ Isolation of three distinct CycD3 genes expressed during fruit development in tomato.|||Molecular characterization of the expression of distinct classes of cyclins during the early development of tomato fruit. ^@ Chevalier C.|||Joubes J.|||Kvarnheden A.|||Morris B.A.|||O'Brien I.|||Raymond P.|||Walsh D.|||Yao J.L.|||Zhan X.
http://togogenome.org/gene/4081:NRAMP1 ^@ http://purl.uniprot.org/uniprot/Q84LR1 ^@ 12709425 ^@ J Biol Chem|||J. Biol. Chem. ^@ Differential regulation of nramp and irt metal transporter genes in wild type and iron uptake mutants of tomato. ^@ Bauer P.|||Bereczky Z.|||Ganal M.|||Schubert V.|||Wang H.Y.
http://togogenome.org/gene/4081:NSY ^@ http://purl.uniprot.org/uniprot/K4C9E2 ^@ 10995464|||11029576 ^@ Eur. J. Biochem.|||Proc. Natl. Acad. Sci. U.S.A. ^@ An alternative pathway to beta -carotene formation in plant chromoplasts discovered by map-based cloning of beta and old-gold color mutations in tomato.|||Identification of neoxanthin synthase as a carotenoid cyclase paralog. ^@ Backhaus R.A.|||Bouvier F.|||Camara B.|||Carmel-Goren L.|||D'harlingue A.|||Hirschberg J.|||Kumagai M.H.|||Ronen G.|||Zamir D.
http://togogenome.org/gene/4081:LOC543989 ^@ http://purl.uniprot.org/uniprot/P27058 ^@ 10708853|||1549783 ^@ Biochim. Biophys. Acta|||Science ^@ Structure, expression, and antisense inhibition of the systemin precursor gene.|||The systemin signaling pathway: differential activation of plant defensive genes. ^@ McGurl B.|||Orozco-Cardenas M.|||Pearce G.|||Ryan C.A.
http://togogenome.org/gene/4081:LOC101254175 ^@ http://purl.uniprot.org/uniprot/A0A0K1U1X9 ^@ 26248665 ^@ J Exp Bot|||J. Exp. Bot. ^@ L-type lectin receptor kinases in Nicotiana benthamiana and tomato and their role in Phytophthora resistance. ^@ Bouwmeester K.|||Govers F.|||Wang Y.|||Weide R.
http://togogenome.org/gene/4081:LOC101257591 ^@ http://purl.uniprot.org/uniprot/K4CRM4 ^@ 26248665 ^@ J Exp Bot|||J. Exp. Bot. ^@ L-type lectin receptor kinases in Nicotiana benthamiana and tomato and their role in Phytophthora resistance. ^@ Bouwmeester K.|||Govers F.|||Wang Y.|||Weide R.
http://togogenome.org/gene/4081:LeNCED1 ^@ http://purl.uniprot.org/uniprot/O24023 ^@ 19246595|||19322584|||22108525|||22345638|||25039074|||26086888|||29632966|||29760199 ^@ Cell. Mol. Life Sci.|||J. Exp. Bot.|||J. Plant Physiol.|||Plant Physiol.|||Planta ^@ Abscisic acid levels in tomato ovaries are regulated by LeNCED1 and SlCYP707A1.|||Fruit-specific RNAi-mediated suppression of SlNCED1 increases both lycopene and beta-carotene contents in tomato fruit.|||Hardening with salicylic acid induces concentration-dependent changes in abscisic acid biosynthesis of tomato under salt stress.|||SlNCED1 and SlCYP707A2: key genes involved in ABA metabolism during tomato fruit ripening.|||Suppression of 9-cis-epoxycarotenoid dioxygenase, which encodes a key enzyme in abscisic acid biosynthesis, alters fruit texture in transgenic tomato.|||The NAC transcription factor SlNAP2 regulates leaf senescence and fruit yield in tomato.|||The functional analysis of SlNCED1 in tomato pollen development.|||The role of ABA in triggering ethylene biosynthesis and ripening of tomato fruit. ^@ Balazadeh S.|||Chen P.|||Csiszar J.|||Cui M.|||Dai S.|||Du Y.|||Duan C.|||Fernie A.R.|||Feron R.|||Galle A.|||Guo Y.|||Hedden P.|||Horvath E.|||Ji K.|||Jiang L.|||Kai W.|||Leng P.|||Li P.|||Li Q.|||Liang B.|||Ma Q.|||Ma X.|||Mariani C.|||Mueller-Roeber B.|||Nitsch L.M.|||Oplaat C.|||Pei Y.|||Poor P.|||Ren J.|||Sun L.|||Sun Y.|||Szepesi A.|||Tari I.|||Tureckova V.|||Vriezen W.H.|||Wang H.|||Wang J.|||Wang L.|||Wang Q.|||Wang Y.|||Wolters-Arts M.|||Wu Y.|||Xue G.-P.|||Yuan B.|||Zhang M.|||Zhang Y.|||Zhao B.
http://togogenome.org/gene/4081:LOC100316892 ^@ http://purl.uniprot.org/uniprot/C8C507 ^@ 21266497 ^@ J Exp Bot|||J. Exp. Bot. ^@ The auxin receptor homologue in Solanum lycopersicum stimulates tomato fruit set and leaf morphogenesis. ^@ Deng W.|||Hao Y.|||Li Z.|||Miao Q.|||Ren Z.|||Yang Y.
http://togogenome.org/gene/4081:NP24 ^@ http://purl.uniprot.org/uniprot/P12670 ^@ 1859873|||9115696 ^@ Phytochemistry|||Plant Mol. Biol. ^@ Identification of the viroid-induced tomato pathogenesis-related (PR) protein P23 as the thaumatin-like tomato protein NP24 associated with osmotic stress.|||Two isoforms of NP24: a thaumatin-like protein in tomato fruit. ^@ Conejero V.|||Frank R.|||Pressey R.|||Rodrigo I.|||Vera P.
http://togogenome.org/gene/4081:LOC101250080 ^@ http://purl.uniprot.org/uniprot/K4DAI3 ^@ 27909045 ^@ Plant Physiol|||Plant Physiol. ^@ A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity. ^@ Chen X.|||Connor R.A.|||Gough J.|||Martin G.B.|||Mural R.V.|||Oates M.E.|||Zeng L.|||Zhou B.
http://togogenome.org/gene/4081:LeEF-1 ^@ http://purl.uniprot.org/uniprot/P17786 ^@ 2377481|||2748335 ^@ Nucleic Acids Res. ^@ Nucleotide sequence of an EF-1 alpha genomic clone from tomato.|||Structure and expression of elongation factor 1 alpha in tomato. ^@ Haitt W.R.|||Hiatt W.R.|||Houck C.M.|||Pokalsky A.R.|||Rasmussen R.|||Ridge N.|||Ridge N.P.|||Rose R.E.|||Shewmaker C.K.
http://togogenome.org/gene/4081:SERK1 ^@ http://purl.uniprot.org/uniprot/G0XZA3 ^@ 21481032 ^@ Plant J|||Plant J. ^@ The receptor-like kinase SlSERK1 is required for Mi-1-mediated resistance to potato aphids in tomato. ^@ Atamian H.S.|||Kaloshian I.|||Li B.|||Mantelin S.|||Peng H.C.|||Takken F.L.
http://togogenome.org/gene/4081:EIL1 ^@ http://purl.uniprot.org/uniprot/Q94FV4 ^@ 11359609 ^@ Plant J|||Plant J. ^@ Members of the tomato LeEIL (EIN3-like) gene family are functionally redundant and regulate ethylene responses throughout plant development. ^@ Ciardi J.A.|||Klee H.J.|||Taylor M.G.|||Tieman D.M.
http://togogenome.org/gene/4081:LOC101266285 ^@ http://purl.uniprot.org/uniprot/A0A6G8RR30 ^@ 32167545 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ A Group of O-Acetyltransferases Catalyze Xyloglucan Backbone Acetylation and Can Alter Xyloglucan Xylosylation Pattern and Plant Growth When Expressed in Arabidopsis.|||A group of O-acetyltransferases catalyze xyloglucan backbone acetylation and can alter xyloglucan xylosylation pattern and plant growth when expressed in Arabidopsis. ^@ Cui D.|||Phillips D.R.|||Richardson E.A.|||Ye Z.H.|||Zhong R.
http://togogenome.org/gene/4081:LOC101251893 ^@ http://purl.uniprot.org/uniprot/A0A3Q7GZ83 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:ER5 ^@ http://purl.uniprot.org/uniprot/P93220 ^@ 10417710|||9426604 ^@ Plant J|||Plant J.|||Plant Mol Biol|||Plant Mol. Biol. ^@ ER5, a tomato cDNA encoding an ethylene-responsive LEA-like protein: characterization and expression in response to drought, ABA and wounding.|||Ethylene-regulated gene expression in tomato fruit: characterization of novel ethylene-responsive and ripening-related genes isolated by differential display. ^@ Bouzayen M.|||Frasse P.|||Jones B.|||Latch A.|||Latche A.|||Lelievre J.M.|||Maitre B.|||Marty C.|||Pech J.C.|||Zegzouti H.
http://togogenome.org/gene/4081:LOC101248611 ^@ http://purl.uniprot.org/uniprot/A0A7S9KJJ1 ^@ 33206370 ^@ New|||New Phytol ^@ The root-knot nematode effector MiEFF18 interacts with the plant core spliceosomal protein SmD1 required for giant cell formation. ^@ Abad P.|||Bazin J.|||Bouteiller N.|||Chen Y.|||Crespi M.D.|||Favery B.|||Marteu N.|||Mejias J.|||Quentin M.|||Sawa S.|||Truong N.M.|||Vaucheret H.
http://togogenome.org/gene/4081:LyesC2p026 ^@ http://purl.uniprot.org/uniprot/A0A0C5CHH1|||http://purl.uniprot.org/uniprot/P61242 ^@ 16575560|||16830097|||1718481|||25604480|||7874744 ^@ Curr. Genet.|||J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Plant Mol. Biol.|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Expression of the large plastid gene, ORF2280, in tomato fruits and flowers.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||Survey of plastid RNA abundance during tomato fruit ripening: the amounts of RNA from the ORF 2280 region increase in chromoplasts.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Boyer C.D.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Hardison R.C.|||Hinman S.B.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Richards C.M.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LOC101262990 ^@ http://purl.uniprot.org/uniprot/K4DAQ1 ^@ 28817560 ^@ PLoS Genet|||PLoS Genet. ^@ Fruit weight is controlled by Cell Size Regulator encoding a novel protein that is expressed in maturing tomato fruits. ^@ Chakrabarti M.|||Huang Z.|||Illa-Berenguer E.|||Liu X.|||Mu Q.|||Ramos A.|||Wang Y.|||van der Knaap E.
http://togogenome.org/gene/4081:PIN3 ^@ http://purl.uniprot.org/uniprot/E5KGD5 ^@ 22211518 ^@ Plant J|||Plant J. ^@ Evaluating auxin distribution in tomato (Solanum lycopersicum) through an analysis of the PIN and AUX/LAX gene families. ^@ Catala C.|||Pattison R.J.
http://togogenome.org/gene/4081:GLX1 ^@ http://purl.uniprot.org/uniprot/Q42891 ^@ 8616220 ^@ Plant Mol. Biol. ^@ Molecular characterization of glyoxalase-I from a higher plant; upregulation by stress. ^@ Espartero J.|||Pardo J.M.|||Sanchez-Aguayo I.
http://togogenome.org/gene/4081:Acx1B ^@ http://purl.uniprot.org/uniprot/Q5D8D2 ^@ 15722469 ^@ Plant Cell ^@ Role of beta-oxidation in jasmonate biosynthesis and systemic wound signaling in tomato. ^@ Giovannoni J.J.|||Howe G.A.|||Jayanty S.|||Kobayashi Y.|||Lee G.I.|||Li C.|||Liu G.|||Sageman C.|||Schilmiller A.L.|||Vrebalov J.|||Yagi K.
http://togogenome.org/gene/4081:PHYF ^@ http://purl.uniprot.org/uniprot/Q41335 ^@ 10723737|||8616214 ^@ Mol. Biol. Evol.|||Plant Mol Biol|||Plant Mol. Biol. ^@ The phytochrome gene family in tomato and the rapid differential evolution of this family in angiosperms.|||The phytochrome gene family in tomato includes a novel subfamily. ^@ Alba R.|||Cordonnier-Pratt M.-M.|||Cordonnier-Pratt M.M.|||Daniel-Vedele F.|||Hauser B.A.|||Kelmenson P.M.|||Pratt L.H.
http://togogenome.org/gene/4081:pGlcT4 ^@ http://purl.uniprot.org/uniprot/K4CF34 ^@ 24833026 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ The sugar transporter inventory of tomato: genome-wide identification and expression analysis. ^@ Akiyama M.|||Aoki K.|||Koh A.|||Makino H.|||Reuscher S.|||Shibata D.|||Shiratake K.|||Yasuda T.
http://togogenome.org/gene/4081:LOC101247873 ^@ http://purl.uniprot.org/uniprot/K4D3J8 ^@ 24260152 ^@ PLoS ONE|||PLoS One ^@ Genome-wide identification and expression analysis of aquaporins in tomato. ^@ Akiyama M.|||Aoki K.|||Mori C.|||Reuscher S.|||Shibata D.|||Shiratake K.
http://togogenome.org/gene/4081:LecRK-VIII ^@ http://purl.uniprot.org/uniprot/K4D3L1 ^@ 26248665 ^@ J Exp Bot|||J. Exp. Bot. ^@ L-type lectin receptor kinases in Nicotiana benthamiana and tomato and their role in Phytophthora resistance. ^@ Bouwmeester K.|||Govers F.|||Wang Y.|||Weide R.
http://togogenome.org/gene/4081:LOC101251802 ^@ http://purl.uniprot.org/uniprot/K4CND1 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:ht3 ^@ http://purl.uniprot.org/uniprot/D0EXE0 ^@ 20833733 ^@ Mol Plant|||Mol. Plant ^@ Functional characterization and RNAi-mediated suppression reveals roles for hexose transporters in sugar accumulation by tomato fruit. ^@ Cahyanegara R.|||Dibley S.|||Martin A.|||McCurdy D.W.|||Patrick J.W.
http://togogenome.org/gene/4081:MADS-RIN ^@ http://purl.uniprot.org/uniprot/Q8S4L4 ^@ 11951045 ^@ Science ^@ A MADS-box gene necessary for fruit ripening at the tomato ripening-inhibitor (rin) locus. ^@ Drake R.|||Giovannoni J.|||Medrano D.|||Padmanabhan V.|||Ruezinsky D.|||Schuch W.|||Vrebalov J.|||White R.
http://togogenome.org/gene/4081:LOC100505457 ^@ http://purl.uniprot.org/uniprot/E3UBG3 ^@ 20661587 ^@ Planta ^@ Identification and characterization of a novel miR159 target not related to MYB in tomato. ^@ Arazi T.|||Buxdorf K.|||Hendelman A.|||Lapidot M.|||Ori N.|||Stav R.
http://togogenome.org/gene/4081:TCP5 ^@ http://purl.uniprot.org/uniprot/G3BGU5 ^@ 24903607 ^@ BMC Plant Biol|||BMC Plant Biol. ^@ Identification, cloning and characterization of the tomato TCP transcription factor family. ^@ Angenent G.C.|||Bovy A.G.|||Busscher M.|||Busscher-Lange J.|||Karlova R.|||Lammers M.|||Parapunova V.|||de Maagd R.A.
http://togogenome.org/gene/4081:LOC544042 ^@ http://purl.uniprot.org/uniprot/O04681 ^@ 10607299|||11768541|||11971137|||9214637|||9878629 ^@ EMBO J.|||Mol. Plant Microbe Interact.|||Plant Cell|||Plant J. ^@ Overexpression of Pti5 in tomato potentiates pathogen-induced defense gene expression and enhances disease resistance to Pseudomonas syringae pv. tomato.|||Overexpression of Pto activates defense responses and confers broad resistance.|||Pseudomonas syringae pv tomato induces the expression of tomato EREBP-like genes pti4 and pti5 independent of ethylene, salicylate and jasmonate.|||The Pto kinase conferring resistance to tomato bacterial speck disease interacts with proteins that bind a cis-element of pathogenesis-related genes.|||Tomato transcription factors pti4, pti5, and pti6 activate defense responses when expressed in Arabidopsis. ^@ Chakravarthy S.|||Gu Y.-Q.|||Han Y.|||He P.|||He X.|||Kim Y.J.|||Klessig D.F.|||Loh Y.-T.|||Martin G.B.|||Shan L.|||Tang X.|||Thara V.K.|||Warren R.F.|||Wildermuth M.C.|||Xie M.|||Yang C.|||Zhao T.|||Zhou J.-M.|||Zhu L.
http://togogenome.org/gene/4081:LOC101253152 ^@ http://purl.uniprot.org/uniprot/A0A3Q7F2B5 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:LOC101055542 ^@ http://purl.uniprot.org/uniprot/G9HPV3 ^@ 22368074 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ Genome-Wide Identification, Functional Analysis and Expression Profiling of the Aux/IAA Gene Family in Tomato.|||Genome-wide identification, functional analysis and expression profiling of the Aux/IAA gene family in tomato. ^@ Audran-Delalande C.|||Bassa C.|||Bouzayen M.|||Mila I.|||Regad F.|||Zouine M.
http://togogenome.org/gene/4081:SAP5 ^@ http://purl.uniprot.org/uniprot/C4NAK4 ^@ 19424724 ^@ Mol Genet Genomics|||Mol. Genet. Genomics ^@ Characterization and phylogenetic analysis of environmental stress-responsive SAP gene family encoding A20/AN1 zinc finger proteins in tomato. ^@ Sharma A.K.|||Sharma M.K.|||Solanke A.U.|||Tyagi A.K.
http://togogenome.org/gene/4081:LOC543813 ^@ http://purl.uniprot.org/uniprot/Q9FT23 ^@ 15037622 ^@ J Biol Chem|||J. Biol. Chem. ^@ Differential roles of tau class glutathione S-transferases in oxidative stress. ^@ Al-Sabarna K.|||Atanassova N.|||Clatot N.|||Kampranis S.C.|||Kanellopoulos P.N.|||Kilili K.G.|||Makris A.M.|||Vardanyan A.
http://togogenome.org/gene/4081:TBG1 ^@ http://purl.uniprot.org/uniprot/P48980|||http://purl.uniprot.org/uniprot/Q546T5 ^@ 10889266|||7630937|||9625694 ^@ Plant Physiol|||Plant Physiol. ^@ A family of at least seven beta-galactosidase genes is expressed during tomato fruit development.|||A gene coding for tomato fruit beta-galactosidase II is expressed during fruit ripening. Cloning, characterization, and expression pattern.|||Tomato exo-(1-->4)-beta-D-galactanase. Isolation, changes during ripening in normal and mutant tomato fruit, and characterization of a related cDNA clone. ^@ Bird C.R.|||Carey A.T.|||Gross K.C.|||Holt K.|||Picard S.|||Schuch W.|||Seymour G.B.|||Smith D.L.|||Starrett D.A.|||Tucker G.A.|||Wilde R.
http://togogenome.org/gene/4081:SlCYP735A1 ^@ http://purl.uniprot.org/uniprot/I0IUQ0 ^@ 22865911 ^@ J Exp Bot|||J. Exp. Bot. ^@ Roles and regulation of cytokinins in tomato fruit development. ^@ Fukuda M.|||Honda I.|||Imanishi S.|||Kikuchi K.|||Matsuo S.
http://togogenome.org/gene/4081:LOC101244906 ^@ http://purl.uniprot.org/uniprot/K4B0H5 ^@ 29291230 ^@ Virusdisease ^@ Identification of host cellular targets of AC4 and AV2 proteins of tomato leaf curl palampur virus and their sub-cellular localization studies. ^@ Hallan V.|||Kulshreshtha A.|||Roshan P.
http://togogenome.org/gene/4081:LOC101253011 ^@ http://purl.uniprot.org/uniprot/K4ATQ2 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:LOC101250073 ^@ http://purl.uniprot.org/uniprot/K4B946 ^@ 27909045 ^@ Plant Physiol|||Plant Physiol. ^@ A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity. ^@ Chen X.|||Connor R.A.|||Gough J.|||Martin G.B.|||Mural R.V.|||Oates M.E.|||Zeng L.|||Zhou B.
http://togogenome.org/gene/4081:LOC101244084 ^@ http://purl.uniprot.org/uniprot/P17786 ^@ 2377481|||2748335 ^@ Nucleic Acids Res. ^@ Nucleotide sequence of an EF-1 alpha genomic clone from tomato.|||Structure and expression of elongation factor 1 alpha in tomato. ^@ Haitt W.R.|||Hiatt W.R.|||Houck C.M.|||Pokalsky A.R.|||Rasmussen R.|||Ridge N.|||Ridge N.P.|||Rose R.E.|||Shewmaker C.K.
http://togogenome.org/gene/4081:MADS-MC ^@ http://purl.uniprot.org/uniprot/Q8S4L5 ^@ 11951045 ^@ Science ^@ A MADS-box gene necessary for fruit ripening at the tomato ripening-inhibitor (rin) locus. ^@ Drake R.|||Giovannoni J.|||Medrano D.|||Padmanabhan V.|||Ruezinsky D.|||Schuch W.|||Vrebalov J.|||White R.
http://togogenome.org/gene/4081:LOC101245201 ^@ http://purl.uniprot.org/uniprot/K4CUW3 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:PME2.1 ^@ http://purl.uniprot.org/uniprot/P09607 ^@ 3371355|||8018878 ^@ Eur. J. Biochem.|||Plant Mol. Biol. ^@ Identification and sequence determination of a cDNA clone for tomato pectin esterase.|||Molecular characterisation of cDNA clones representing pectin esterase isozymes from tomato. ^@ Bird C.|||Bird C.R.|||Grierson D.|||Hall L.N.|||Knapp J.|||Picton S.|||Ray J.|||Schuch W.|||Seymour G.B.|||Tucker G.A.
http://togogenome.org/gene/4081:MDHAR ^@ http://purl.uniprot.org/uniprot/B3EYD3 ^@ 20230481 ^@ Physiol Plant|||Physiol. Plantarum ^@ Overexpression of chloroplastic monodehydroascorbate reductase enhanced tolerance to temperature and methyl viologen-mediated oxidative stresses. ^@ Li F.|||Meng Q.W.|||Sun Y.L.|||Wang L.Y.|||Wu Q.Y.|||Yang X.H.
http://togogenome.org/gene/4081:DES ^@ http://purl.uniprot.org/uniprot/Q9FPM6 ^@ 11060314 ^@ J. Biol. Chem. ^@ Molecular cloning of a divinyl ether synthase. Identification as a CYP74 cytochrome P-450. ^@ Howe G.A.|||Itoh A.
http://togogenome.org/gene/4081:SlC3H61 ^@ http://purl.uniprot.org/uniprot/B1N661 ^@ 18339939 ^@ Science ^@ A retrotransposon-mediated gene duplication underlies morphological variation of tomato fruit. ^@ Jiang N.|||Schaffner E.|||Stockinger E.J.|||Xiao H.|||van der Knaap E.
http://togogenome.org/gene/4081:LOC101268456 ^@ http://purl.uniprot.org/uniprot/K4BIP4 ^@ 24416299 ^@ PLoS ONE ^@ Slow co-evolution of the MAGO and Y14 protein families is required for the maintenance of their obligate heterodimerization mode. ^@ Gong P.|||He C.|||Zhao M.
http://togogenome.org/gene/4081:LOC100134911 ^@ http://purl.uniprot.org/uniprot/A7XXZ0 ^@ 17637677 ^@ Nature ^@ JAZ repressor proteins are targets of the SCF(COI1) complex during jasmonate signalling. ^@ Browse J.|||He S.Y.|||Howe G.A.|||Katsir L.|||Liu G.|||Mandaokar A.|||Melotto M.|||Niu Y.|||Nomura K.|||Thines B.
http://togogenome.org/gene/4081:AGP-1 ^@ http://purl.uniprot.org/uniprot/Q43719 ^@ 7599320|||8980516 ^@ Plant Mol Biol|||Plant Mol. Biol. ^@ Characterization of a cDNA encoding the protein moiety of a putative arabinogalactan protein from Lycopersicon esculentum.|||Cloning and developmental/stress-regulated expression of a gene encoding a tomato arabinogalactan protein. ^@ Davies C.|||Li S.X.|||Pogson B.J.|||Showalter A.M.
http://togogenome.org/gene/4081:LOC101250025 ^@ http://purl.uniprot.org/uniprot/A0A3Q7HS74 ^@ 28194155 ^@ Front. Plant Sci. ^@ Functional characterization of CYP716 family P450 enzymes in triterpenoid biosynthesis in tomato. ^@ Fukushima E.O.|||Muranaka T.|||Seki H.|||Shimizu Y.|||Yasumoto S.
http://togogenome.org/gene/4081:CTR4 ^@ http://purl.uniprot.org/uniprot/Q5YKK6 ^@ 15284494 ^@ Plant Mol Biol|||Plant Mol. Biol. ^@ Evidence that CTR1-mediated ethylene signal transduction in tomato is encoded by a multigene family whose members display distinct regulatory features. ^@ Adams-Phillips L.|||Barry C.|||Bouzayen M.|||Giovannoni J.|||Kannan P.|||Leclercq J.
http://togogenome.org/gene/4081:TCP6 ^@ http://purl.uniprot.org/uniprot/G3BGU6 ^@ 24903607 ^@ BMC Plant Biol|||BMC Plant Biol. ^@ Identification, cloning and characterization of the tomato TCP transcription factor family. ^@ Angenent G.C.|||Bovy A.G.|||Busscher M.|||Busscher-Lange J.|||Karlova R.|||Lammers M.|||Parapunova V.|||de Maagd R.A.
http://togogenome.org/gene/4081:SP6A ^@ http://purl.uniprot.org/uniprot/Q84XK8 ^@ 14682620 ^@ Plant Mol Biol|||Plant Mol. Biol. ^@ The SELF-PRUNING gene family in tomato. ^@ Carmel-Goren L.|||Lifschitz E.|||Liu Y.S.|||Zamir D.
http://togogenome.org/gene/4081:E8-6 ^@ http://purl.uniprot.org/uniprot/O24018 ^@ 12223786 ^@ Plant Physiol|||Plant Physiol. ^@ Nucleotide sequence of a cDNA clone (Accession No. AF004914) encoding a member of the E8 gene family of Lycopersicon esculentum (PGR97-102).|||The Electronic Plant Gene Register. ^@ Deikman J.|||Fischer R.L.|||Kneissl M.L.
http://togogenome.org/gene/4081:LOC101250648 ^@ http://purl.uniprot.org/uniprot/A0A5P8U374 ^@ 31625612 ^@ New Phytol|||New Phytol. ^@ Anthocyanin Fruit encodes an R2R3-MYB transcription factor, SlAN2-like, activating the transcription of SlMYBATV to fine-tune anthocyanin content in tomato fruit. ^@ Cao B.|||Chen N.|||Huang Z.|||Li D.|||Liu X.|||Qiu Z.|||Yan S.|||Yu B.|||Zhi J.
http://togogenome.org/gene/4081:LOC101265549 ^@ http://purl.uniprot.org/uniprot/A0A3Q7HWE4 ^@ 35640121 ^@ Plant Physiol. ^@ Critical roles of mitochondrial fatty acid synthesis in tomato development and environmental response. ^@ Chen R.|||Chen R.'|||Guo L.|||Li X.|||Lu Y.|||Luo J.|||Ouyang B.|||Shen X.|||Shi C.|||Tang S.|||Tang Y.|||Ye Z.|||Yu H.|||Zhang Y.|||Zhou Y.
http://togogenome.org/gene/4081:TCP19 ^@ http://purl.uniprot.org/uniprot/G3BGV9 ^@ 24903607 ^@ BMC Plant Biol|||BMC Plant Biol. ^@ Identification, cloning and characterization of the tomato TCP transcription factor family. ^@ Angenent G.C.|||Bovy A.G.|||Busscher M.|||Busscher-Lange J.|||Karlova R.|||Lammers M.|||Parapunova V.|||de Maagd R.A.
http://togogenome.org/gene/4081:fen ^@ http://purl.uniprot.org/uniprot/P93216 ^@ 9014365 ^@ Plant Cell ^@ Alleles of Pto and Fen occur in bacterial speck-susceptible and fenthion-insensitive tomato cultivars and encode active protein kinases. ^@ Jia Y.|||Loh Y.T.|||Martin G.B.|||Zhou J.
http://togogenome.org/gene/4081:LyesC2p086 ^@ http://purl.uniprot.org/uniprot/A0A0C5C9P9|||http://purl.uniprot.org/uniprot/Q2MIB7 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:rnalx ^@ http://purl.uniprot.org/uniprot/P80196 ^@ 7894013|||8319673 ^@ Eur. J. Biochem.|||Plant Mol. Biol. ^@ Amino acid sequence of an intracellular, phosphate-starvation-induced ribonuclease from cultured tomato (Lycopersicon esculentum) cells.|||cDNA structure and regulatory properties of a family of starvation-induced ribonucleases from tomato. ^@ Abel S.|||Glund K.|||Irie M.|||Koeck M.|||Loeffler A.
http://togogenome.org/gene/4081:Pto ^@ http://purl.uniprot.org/uniprot/P93215 ^@ 11952131|||9014365 ^@ Mol Plant Microbe Interact|||Mol. Plant Microbe Interact.|||Plant Cell ^@ Alleles of Pto and Fen occur in bacterial speck-susceptible and fenthion-insensitive tomato cultivars and encode active protein kinases.|||Functional analyses of the Pto resistance gene family in tomato and the identification of a minor resistance determinant in a susceptible haplotype. ^@ Bernal A.J.|||Chang J.H.|||Jia Y.|||Lavelle D.T.|||Loh Y.T.|||Martin G.B.|||Michelmore R.W.|||Staskawicz B.J.|||Tai Y.S.|||Zhou J.
http://togogenome.org/gene/4081:LOC100736527 ^@ http://purl.uniprot.org/uniprot/K4D1F3 ^@ 24260152 ^@ PLoS ONE|||PLoS One ^@ Genome-wide identification and expression analysis of aquaporins in tomato. ^@ Akiyama M.|||Aoki K.|||Mori C.|||Reuscher S.|||Shibata D.|||Shiratake K.
http://togogenome.org/gene/4081:ARF8-1 ^@ http://purl.uniprot.org/uniprot/E0A8P3 ^@ 21735233 ^@ Plant Cell Rep. ^@ Identification, isolation and expression analysis of auxin response factor (ARF) genes in Solanum lycopersicum. ^@ Cheng L.|||Kong F.|||Liu S.|||Lu G.|||Peng Z.|||Wang F.|||Wu J.|||Yu X.
http://togogenome.org/gene/4081:GWD ^@ http://purl.uniprot.org/uniprot/B5B3R3 ^@ 18764922 ^@ Plant J|||Plant J. ^@ The legwd mutant uncovers the role of starch phosphorylation in pollen development and germination in tomato. ^@ Aharoni A.|||Kossmann J.|||Levy A.A.|||Melamed-Bessudo C.|||Nashilevitz S.|||Wolf S.
http://togogenome.org/gene/4081:LOC100147720 ^@ http://purl.uniprot.org/uniprot/Q43521 ^@ 9132056 ^@ Plant Mol. Biol. ^@ Cloning and characterization of tomato leaf senescence-related cDNAs. ^@ Cooper W.|||Drake R.|||Farrell A.|||Grierson D.|||Hackett R.|||John I.
http://togogenome.org/gene/4081:PRK2 ^@ http://purl.uniprot.org/uniprot/O64397 ^@ 9501107 ^@ Plant Cell ^@ Pollen tube localization implies a role in pollen-pistil interactions for the tomato receptor-like protein kinases LePRK1 and LePRK2. ^@ Eyal Y.|||McCormick S.|||Muschietti J.
http://togogenome.org/gene/4081:SLBRC1A ^@ http://purl.uniprot.org/uniprot/F6KB98 ^@ 21554455 ^@ Plant J|||Plant J. ^@ Role of tomato BRANCHED1-like genes in the control of shoot branching. ^@ Bendahmane A.|||Cubas P.|||Dopazo H.|||Grandio E.G.|||Marcel F.|||Martin-Trillo M.|||Rodriguez-Buey M.L.|||Schmitz G.|||Serra F.|||Theres K.
http://togogenome.org/gene/4081:LOC101247461 ^@ http://purl.uniprot.org/uniprot/A0A3Q7I5Y9 ^@ 23057995|||28733419 ^@ BMC Plant Biol.|||Plant Cell ^@ Functional analysis and binding affinity of tomato ethylene response factors provide insight on the molecular bases of plant differential responses to ethylene.|||MYC2 orchestrates a hierarchical transcriptional cascade that regulates jasmonate-mediated plant immunity in tomato. ^@ Bouzayen M.|||Chen K.|||Chen Q.|||Deng L.|||Du M.|||Huang Z.|||Latche A.|||Li C.|||Li C.B.|||Liu Y.|||Mila I.|||Ohme-Takagi M.|||Pech J.C.|||Pirrello J.|||Prasad B.C.|||Regad F.|||Tzeng D.T.W.|||Wang Q.|||Wu F.|||Yang T.|||Zhai Q.|||Zhang W.|||Zhao J.|||Zhong S.|||Zhou M.|||Zouine M.
http://togogenome.org/gene/4081:LOC101266035 ^@ http://purl.uniprot.org/uniprot/K4C998 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:TCP13 ^@ http://purl.uniprot.org/uniprot/G3BGV3 ^@ 24903607 ^@ BMC Plant Biol|||BMC Plant Biol. ^@ Identification, cloning and characterization of the tomato TCP transcription factor family. ^@ Angenent G.C.|||Bovy A.G.|||Busscher M.|||Busscher-Lange J.|||Karlova R.|||Lammers M.|||Parapunova V.|||de Maagd R.A.
http://togogenome.org/gene/4081:AUREA ^@ http://purl.uniprot.org/uniprot/Q588D6 ^@ 15695440|||31822504 ^@ J Biol Chem|||J. Biol. Chem.|||Plant Cell Physiol|||Plant Cell Physiol. ^@ Crystal structure of phytochromobilin synthase in complex with biliverdin IXalpha, a key enzyme in the biosynthesis of phytochrome.|||The tomato photomorphogenetic mutant, aurea, is deficient in phytochromobilin synthase for phytochrome chromophore biosynthesis. ^@ Fukuyama K.|||Iwata N.|||Kami C.|||Kataoka H.|||Kohchi T.|||Linley P.J.|||Mukougawa K.|||Muramoto T.|||Sugishima M.|||Wada K.|||Yamamoto K.|||Yokota A.
http://togogenome.org/gene/4081:TCP1 ^@ http://purl.uniprot.org/uniprot/G3BGU2 ^@ 24903607 ^@ BMC Plant Biol|||BMC Plant Biol. ^@ Identification, cloning and characterization of the tomato TCP transcription factor family. ^@ Angenent G.C.|||Bovy A.G.|||Busscher M.|||Busscher-Lange J.|||Karlova R.|||Lammers M.|||Parapunova V.|||de Maagd R.A.
http://togogenome.org/gene/4081:LOC101247801 ^@ http://purl.uniprot.org/uniprot/A0A3Q7FVJ9 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:LOC101262275 ^@ http://purl.uniprot.org/uniprot/Q6LB28 ^@ 21900168 ^@ J Virol|||J. Virol. ^@ Histone H3 interacts and colocalizes with the nuclear shuttle protein and the movement protein of a geminivirus.|||Histone h3 interacts and colocalizes with the nuclear shuttle protein and the movement protein of a geminivirus. ^@ Gilbertson R.L.|||Lucas W.J.|||Park M.R.|||Rojas M.R.|||Seo Y.S.|||Zhou Y.
http://togogenome.org/gene/4081:HPL ^@ http://purl.uniprot.org/uniprot/K4CF70 ^@ 10859201|||10923789|||11154338 ^@ Biosci. Biotechnol. Biochem.|||Plant Physiol. ^@ Cytochrome P450-dependent metabolism of oxylipins in tomato. Cloning and expression of allene oxide synthase and fatty acid hydroperoxide lyase.|||Fatty acid hydroperoxide lyase in tomato fruits: cloning and properties of a recombinant enzyme expressed in Escherichia coli.|||Tomato allene oxide synthase and fatty acid hydroperoxide lyase, two cytochrome P450s involved in oxylipin metabolism, are targeted to different membranes of chloroplast envelope. ^@ DeRocher A.E.|||Froehlich J.E.|||Hiatt B.|||Howe G.A.|||Itoh A.|||Kajiwara T.|||Knauf V.|||Lee G.I.|||Li L.|||Matsui K.|||Miyahara C.|||Wilkinson J.
http://togogenome.org/gene/4081:LOC101245066 ^@ http://purl.uniprot.org/uniprot/K4C627 ^@ 25986128 ^@ Plant Physiol|||Plant Physiol. ^@ A Feedback-Insensitive Isopropylmalate Synthase Affects Acylsugar Composition in Cultivated and Wild Tomato. ^@ Adams C.|||Jones A.D.|||Kim J.|||Last R.L.|||Leong B.|||Moghe G.D.|||Ning J.|||Ofner I.|||Wang Z.|||Zamir D.
http://togogenome.org/gene/4081:HKT1;2 ^@ http://purl.uniprot.org/uniprot/U6EJ49 ^@ 24594396 ^@ J Plant Physiol|||J. Plant Physiol. ^@ Differences in shoot Na(+) accumulation between two tomato species are due to differences in ion affinity of HKT1;2.|||Differences in shoot Na+ accumulation between two tomato species are due to differences in ion affinity of HKT1;2. ^@ Almeida P.|||de Boer A.H.|||de Boer G.J.
http://togogenome.org/gene/4081:PG2 ^@ http://purl.uniprot.org/uniprot/P05117 ^@ 12232274|||12232422|||14646066|||15007842|||16666031|||2152163|||3405769|||3786135|||6489331|||6617647|||7227374|||7449759|||7827495|||9701584|||9747798 ^@ Acta Crystallogr. D|||Biotechnol. Bioeng.|||Eur. J. Biochem.|||Nucleic Acids Res.|||Plant Cell|||Plant Mol. Biol.|||Plant Physiol. ^@ Analysis of tomato polygalacturonase expression in transgenic tobacco.|||Carbohydrate composition and electrophoretic properties of tomato polygalacturonase isoenzymes.|||Changes in polygalacturonase isoenzymes during the 'ripening' of normal and mutant tomato fruit.|||Differential expression of the two subunits of tomato polygalacturonase isoenzyme 1 in wild-type and in tomato fruit.|||In vitro synthesis and processing of tomato fruit polygalacturonase.|||Insertional inactivation of the tomato polygalacturonase gene.|||Polygalacturonase-mediated solubilization and depolymerization of pectic polymers in tomato fruit cell walls. Regulation By ph and ionic conditions.|||Purification and characterization of tomato polygalacturonase converter.|||Purified tomato polygalacturonase activity during thermal and high-pressure treatment.|||Reduction of tomato polygalacturonase beta subunit expression affects pectin solubilization and degradation during fruit ripening.|||Resolving the space-group ambiguity of crystals of tomato fruit polygalacturonase.|||Sequencing and identification of a cDNA clone for tomato polygalacturonase.|||The conversion of tomato-fruit polygalacturonase isoenzyme 2 into isoenzyme 1 in vitro.|||The nucleotide sequence of the 5' flanking region of a tomato polygalacturonase gene.|||Tomato fruit polygalacturonase isozyme 1 -- characterization of the beta subunit and its state of assembly in vivo. ^@ Bennett A.B.|||Bird C.R.|||Butowt R.|||Chun J.-P.|||Cooley M.B.|||DeJesus C.E.|||DellaPenna D.|||Duvetter T.|||Grierson D.|||Hall B.|||Heffron S.|||Hendrickx M.E.|||Hiatt W.R.|||Houck C.M.|||Huber D.J.|||Jurnak F.|||Keen J.|||Luh B.S.|||Moeller R.|||Monson E.K.|||Moore T.|||Moshrefi M.|||Osteryoung K.W.|||Pressey R.|||Ray J.|||Robertson N.G.|||Rose R.E.|||Schuch W.|||Sheehy R.E.|||Smout C.|||Taban A.H.|||Toenjes K.|||Tucker G.A.|||Verlent I.|||Watkins S.|||Watson C.F.|||Winkler V.|||Yoder J.I.|||Zheng L.|||van Loey A.
http://togogenome.org/gene/4081:LyesC2p064 ^@ http://purl.uniprot.org/uniprot/A0A0C5CUS1|||http://purl.uniprot.org/uniprot/Q2MI95 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:Ubc13-2 ^@ http://purl.uniprot.org/uniprot/K4CXQ6 ^@ 24076975|||27909045 ^@ Plant Cell|||Plant Physiol|||Plant Physiol. ^@ A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity.|||The tomato Fni3 lysine-63-specific ubiquitin-conjugating enzyme and suv ubiquitin E2 variant positively regulate plant immunity. ^@ Brady J.J.|||Chen X.|||Connor R.A.|||Gough J.|||Hamera S.|||Liu Y.|||Martin G.B.|||Mural R.V.|||Oates M.E.|||Rosebrock T.R.|||Zeng L.|||Zhou B.
http://togogenome.org/gene/4081:NAC1 ^@ http://purl.uniprot.org/uniprot/Q6RH27 ^@ 15608335|||17210988|||26448569 ^@ J Exp Bot|||J. Exp. Bot.|||PLoS Genet|||PLoS Genet.|||Plant Cell ^@ A NAC domain protein interacts with tomato leaf curl virus replication accessory protein and enhances viral replication.|||A Novel Route Controlling Begomovirus Resistance by the Messenger RNA Surveillance Factor Pelota.|||Identification of early salt stress response genes in tomato root by suppression subtractive hybridization and microarray analysis. ^@ Chen L.|||Dogra S.C.|||Evenor D.|||Fei Z.|||Fogel D.|||Gelbart D.|||Healy H.|||Karniel U.|||Kutsher Y.|||Lapidot M.|||Levin I.|||Li H.|||Makhbash Z.|||Nahon S.|||Ouyang B.|||Randles J.W.|||Rasheed M.S.|||Reuveni M.|||Rezaian M.A.|||Selth L.A.|||Shlomo H.|||Yang T.|||Ye Z.|||Zhang J.|||Zhang L.|||Zhang Y.
http://togogenome.org/gene/4081:EREB ^@ http://purl.uniprot.org/uniprot/Q8H6S9 ^@ 15604719 ^@ Plant Mol Biol|||Plant Mol. Biol. ^@ Tomato stress-responsive factor TSRF1 interacts with ethylene responsive element GCC box and regulates pathogen resistance to Ralstonia solanacearum. ^@ Chen J.|||Huang D.|||Huang R.|||Huang Z.|||Wang X.C.|||Yang Y.|||Zhang D.|||Zhang H.
http://togogenome.org/gene/4081:LOC101249784 ^@ http://purl.uniprot.org/uniprot/A0A3Q7F5X2 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:LE16 ^@ http://purl.uniprot.org/uniprot/P93224 ^@ 16668529 ^@ Plant Physiol. ^@ Nucleotide sequence and spatial expression pattern of a drought- and abscisic acid-induced gene of tomato. ^@ Bray E.A.|||Cohen A.|||Plant A.L.
http://togogenome.org/gene/4081:LOC101253268 ^@ http://purl.uniprot.org/uniprot/A0A3Q7JYM3 ^@ 35643637 ^@ Plant Commun ^@ Cryo-EM structure and rRNA modification sites of a plant ribosome. ^@ Amunts A.|||Cottilli P.|||Itoh Y.|||Lison P.|||Nobe Y.|||Petrov A.S.|||Taoka M.
http://togogenome.org/gene/4081:ER49 ^@ http://purl.uniprot.org/uniprot/Q9SWW0 ^@ 10417710 ^@ Plant J|||Plant J. ^@ Ethylene-regulated gene expression in tomato fruit: characterization of novel ethylene-responsive and ripening-related genes isolated by differential display. ^@ Bouzayen M.|||Frasse P.|||Jones B.|||Latch A.|||Maitre B.|||Marty C.|||Pech J.C.|||Zegzouti H.
http://togogenome.org/gene/4081:LOC101251154 ^@ http://purl.uniprot.org/uniprot/K4BEV4 ^@ 24260152 ^@ PLoS ONE|||PLoS One ^@ Genome-wide identification and expression analysis of aquaporins in tomato. ^@ Akiyama M.|||Aoki K.|||Mori C.|||Reuscher S.|||Shibata D.|||Shiratake K.
http://togogenome.org/gene/4081:ASR3 ^@ http://purl.uniprot.org/uniprot/P37220 ^@ 16822623 ^@ Gene ^@ Evolutionary history of the Asr gene family. ^@ Carrari F.|||Frankel N.|||Hasson E.|||Iusem N.D.
http://togogenome.org/gene/4081:LOC101267076 ^@ http://purl.uniprot.org/uniprot/A0A6G8RRA3 ^@ 32167545 ^@ Plant Cell Physiol|||Plant Cell Physiol. ^@ A Group of O-Acetyltransferases Catalyze Xyloglucan Backbone Acetylation and Can Alter Xyloglucan Xylosylation Pattern and Plant Growth When Expressed in Arabidopsis.|||A group of O-acetyltransferases catalyze xyloglucan backbone acetylation and can alter xyloglucan xylosylation pattern and plant growth when expressed in Arabidopsis. ^@ Cui D.|||Phillips D.R.|||Richardson E.A.|||Ye Z.H.|||Zhong R.
http://togogenome.org/gene/4081:LyesC2p047 ^@ http://purl.uniprot.org/uniprot/A0A0C5CED7|||http://purl.uniprot.org/uniprot/Q2MI78 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:TCP24 ^@ http://purl.uniprot.org/uniprot/G3BGW3 ^@ 24903607 ^@ BMC Plant Biol|||BMC Plant Biol. ^@ Identification, cloning and characterization of the tomato TCP transcription factor family. ^@ Angenent G.C.|||Bovy A.G.|||Busscher M.|||Busscher-Lange J.|||Karlova R.|||Lammers M.|||Parapunova V.|||de Maagd R.A.
http://togogenome.org/gene/4081:LOC101055569 ^@ http://purl.uniprot.org/uniprot/H8ZRY5 ^@ 22330838 ^@ BMC Plant Biol|||BMC Plant Biol. ^@ Characterization of a calcium/calmodulin-regulated SR/CAMTA gene family during tomato fruit development and ripening. ^@ Conway W.S.|||Peng H.|||Whitaker B.D.|||Yang T.
http://togogenome.org/gene/4081:PT1 ^@ http://purl.uniprot.org/uniprot/O22548 ^@ 9449838 ^@ Plant Physiol|||Plant Physiol. ^@ Tomato phosphate transporter genes are differentially regulated in plant tissues by phosphorus. ^@ Kononowicz A.K.|||Liu C.|||Muchhal U.S.|||Raghothama K.G.|||Uthappa M.
http://togogenome.org/gene/4081:tVPS41 ^@ http://purl.uniprot.org/uniprot/P93231 ^@ 9159129 ^@ Proc. Natl. Acad. Sci. U.S.A. ^@ Characterization of VPS41, a gene required for vacuolar trafficking and high-affinity iron transport in yeast. ^@ Emr S.D.|||Kaplan J.|||Radisky D.C.|||Snyder W.B.
http://togogenome.org/gene/4081:lin5 ^@ http://purl.uniprot.org/uniprot/Q9LD97 ^@ 10781077|||15375271 ^@ Proc Natl Acad Sci U S A|||Proc. Natl. Acad. Sci. U.S.A.|||Science ^@ A recombination hotspot delimits a wild-species quantitative trait locus for tomato sugar content to 484 bp within an invertase gene.|||Zooming in on a quantitative trait for tomato yield using interspecific introgressions. ^@ Carrari F.|||Fernie A.R.|||Fridman E.|||Liu Y.S.|||Pleban T.|||Zamir D.
http://togogenome.org/gene/4081:LyesC2p068 ^@ http://purl.uniprot.org/uniprot/A0A0U1ZJV2|||http://purl.uniprot.org/uniprot/Q2MI99 ^@ 16575560|||16830097|||25604480 ^@ J. Mol. Evol.|||Mitochondrial DNA|||Mitochondrial DNA A DNA Mapp Seq Anal|||Theor. Appl. Genet. ^@ Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.|||Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.|||The completed eight chloroplast genomes of tomato from Solanum genus. ^@ Aspinall S.|||Bock R.|||Daniell H.|||Gray J.C.|||Grevich J.|||Guda C.|||Jansen R.K.|||Kahlau S.|||Lee S.-B.|||Quesada-Vargas T.|||Saski C.|||Tomkins J.|||Wu Z.
http://togogenome.org/gene/4081:LOC101244673 ^@ http://purl.uniprot.org/uniprot/K4C978 ^@ 24260152 ^@ PLoS ONE|||PLoS One ^@ Genome-wide identification and expression analysis of aquaporins in tomato. ^@ Akiyama M.|||Aoki K.|||Mori C.|||Reuscher S.|||Shibata D.|||Shiratake K.
http://togogenome.org/gene/4081:LOC101268417 ^@ http://purl.uniprot.org/uniprot/A0A3Q7HTY9 ^@ 35734246 ^@ Front Plant Sci|||Front. Plant Sci. ^@ Structure-Based Modulation of the Ligand Sensitivity of a Tomato Dimeric Abscisic Acid Receptor Through a Glu to Asp Mutation in the Latch Loop. ^@ Albert A.|||Benavente J.L.|||Coego A.|||Daniel-Mozo M.|||Infantes L.|||Lozano-Juste J.|||Ocana-Cuesta J.|||Rivera-Moreno M.|||Rodriguez P.L.
http://togogenome.org/gene/4081:LOC101248710 ^@ http://purl.uniprot.org/uniprot/P37218 ^@ 8055939 ^@ Eur. J. Biochem. ^@ Molecular cloning, sequence analysis and differential expression of an intron-containing gene encoding tomato histone H1. ^@ Jayawardene N.|||Riggs C.D.
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