http://togogenome.org/gene/546414:DEIDE_RS06375 ^@ http://purl.uniprot.org/uniprot/C1CUZ4 ^@ Domain|||Function|||Similarity ^@ Belongs to the vitamin-B12 dependent methionine synthase family.|||Catalyzes the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.|||Modular enzyme with four functionally distinct domains. The isolated Hcy-binding domain catalyzes methyl transfer from free methylcobalamin to homocysteine. The Hcy-binding domain in association with the pterin-binding domain catalyzes the methylation of cob(I)alamin by methyltetrahydrofolate and the methylation of homocysteine. The B12-binding domain binds the cofactor. The AdoMet activation domain binds S-adenosyl-L-methionine. Under aerobic conditions cob(I)alamin can be converted to inactive cob(II)alamin. Reductive methylation by S-adenosyl-L-methionine and flavodoxin regenerates methylcobalamin. http://togogenome.org/gene/546414:DEIDE_RS14360 ^@ http://purl.uniprot.org/uniprot/C1D2D7 ^@ Similarity ^@ Belongs to the intradiol ring-cleavage dioxygenase family. http://togogenome.org/gene/546414:DEIDE_RS09725 ^@ http://purl.uniprot.org/uniprot/C1CWU6 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. LysJ subfamily.|||Binds 1 pyridoxal phosphate per subunit.|||Catalyzes the transfer of the amino group of L-glutamate to [LysW]-aminoadipate 6-semialdehyde, generating [LysW]-gamma-L-lysine.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/546414:DEIDE_RS13170 ^@ http://purl.uniprot.org/uniprot/C1D071 ^@ Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.|||Cytoplasm|||Homotetramer.|||Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate.|||There are 2 substrate-binding sites: the catalytic A site, and the non-catalytic B site that may play a role in the transfer of substrate or product between the active site and the solvent. Alternatively, the B site may bind allosteric effectors. http://togogenome.org/gene/546414:DEIDE_RS04790 ^@ http://purl.uniprot.org/uniprot/C1D1H4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the CcmF/CycK/Ccl1/NrfE/CcsA family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS06590 ^@ http://purl.uniprot.org/uniprot/C1CV30 ^@ Similarity ^@ Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. http://togogenome.org/gene/546414:DEIDE_RS08575 ^@ http://purl.uniprot.org/uniprot/C1CW71 ^@ Similarity ^@ Belongs to the 3-oxoacid CoA-transferase subunit A family. http://togogenome.org/gene/546414:DEIDE_RS07130 ^@ http://purl.uniprot.org/uniprot/C1CVD4 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the RecX family.|||Cytoplasm|||Modulates RecA activity. http://togogenome.org/gene/546414:DEIDE_RS07740 ^@ http://purl.uniprot.org/uniprot/C1CVQ4 ^@ Similarity ^@ Belongs to the 5'-nucleotidase family. http://togogenome.org/gene/546414:DEIDE_RS02035 ^@ http://purl.uniprot.org/uniprot/C1CZS5 ^@ Similarity ^@ Belongs to the zinc-containing alcohol dehydrogenase family. http://togogenome.org/gene/546414:DEIDE_RS17950 ^@ http://purl.uniprot.org/uniprot/C1D1G2 ^@ Subcellular Location Annotation ^@ Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS09540 ^@ http://purl.uniprot.org/uniprot/C1CWR1 ^@ Similarity ^@ Belongs to the glycosyl hydrolase 13 family. http://togogenome.org/gene/546414:DEIDE_RS05640 ^@ http://purl.uniprot.org/uniprot/C1CUJ8 ^@ Similarity ^@ Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. http://togogenome.org/gene/546414:DEIDE_RS14955 ^@ http://purl.uniprot.org/uniprot/C1D2Q4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS00400 ^@ http://purl.uniprot.org/uniprot/C1CXR6 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the argininosuccinate synthase family. Type 1 subfamily.|||Cytoplasm|||Homotetramer. http://togogenome.org/gene/546414:DEIDE_RS05395 ^@ http://purl.uniprot.org/uniprot/C1D1U3 ^@ Function|||Similarity ^@ Belongs to the RapZ-like family.|||Displays ATPase and GTPase activities. http://togogenome.org/gene/546414:DEIDE_RS02715 ^@ http://purl.uniprot.org/uniprot/C1D0D2 ^@ Similarity ^@ Belongs to the Nudix hydrolase family. http://togogenome.org/gene/546414:DEIDE_RS04860 ^@ http://purl.uniprot.org/uniprot/C1D1I8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the peptidase S26 family.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS08355 ^@ http://purl.uniprot.org/uniprot/C1CW27 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS14715 ^@ http://purl.uniprot.org/uniprot/C1D2K8 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the peptidase S24 family.|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. http://togogenome.org/gene/546414:DEIDE_RS03805 ^@ http://purl.uniprot.org/uniprot/C1D0X8 ^@ Similarity ^@ Belongs to the helicase family. UvrD subfamily. http://togogenome.org/gene/546414:DEIDE_RS11045 ^@ http://purl.uniprot.org/uniprot/C1CXW5 ^@ Similarity ^@ Belongs to the AfsR/DnrI/RedD regulatory family. http://togogenome.org/gene/546414:DEIDE_RS12195 ^@ http://purl.uniprot.org/uniprot/C1CYW4 ^@ Similarity ^@ Belongs to the Dps family. http://togogenome.org/gene/546414:DEIDE_RS02940 ^@ http://purl.uniprot.org/uniprot/C1D0H6 ^@ Function|||Similarity ^@ Belongs to the complex I 51 kDa subunit family.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. http://togogenome.org/gene/546414:DEIDE_RS06020 ^@ http://purl.uniprot.org/uniprot/C1CUS5 ^@ Similarity ^@ Belongs to the carbohydrate kinase PfkB family. http://togogenome.org/gene/546414:DEIDE_RS12630 ^@ http://purl.uniprot.org/uniprot/C1CZI6 ^@ Cofactor ^@ Binds 2 Zn(2+) ions per subunit. One is catalytic and the other provides a structural contribution. http://togogenome.org/gene/546414:DEIDE_RS12145 ^@ http://purl.uniprot.org/uniprot/C1CYV4 ^@ Function|||Similarity ^@ ATPase required for the correct placement of the division site. Cell division inhibitors MinC and MinD act in concert to form an inhibitor capable of blocking formation of the polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings.|||Belongs to the ParA family. MinD subfamily. http://togogenome.org/gene/546414:DEIDE_RS00140 ^@ http://purl.uniprot.org/uniprot/C1CXL8 ^@ Function|||Similarity ^@ Belongs to the GHMP kinase family. IspE subfamily.|||Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. http://togogenome.org/gene/546414:DEIDE_RS15805 ^@ http://purl.uniprot.org/uniprot/C1D370 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.|||Cell membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane|||Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane. http://togogenome.org/gene/546414:DEIDE_RS08085 ^@ http://purl.uniprot.org/uniprot/C1CVX4 ^@ Similarity ^@ Belongs to the alpha-IPM synthase/homocitrate synthase family. Homocitrate synthase LYS20/LYS21 subfamily. http://togogenome.org/gene/546414:DEIDE_RS00525 ^@ http://purl.uniprot.org/uniprot/C1CXU0 ^@ Function|||Similarity ^@ Belongs to the V-ATPase E subunit family.|||Produces ATP from ADP in the presence of a proton gradient across the membrane. http://togogenome.org/gene/546414:DEIDE_RS03410 ^@ http://purl.uniprot.org/uniprot/C1D0Q7 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bL35 family. http://togogenome.org/gene/546414:DEIDE_RS01895 ^@ http://purl.uniprot.org/uniprot/C1CZB9 ^@ Similarity ^@ Belongs to the ABC transporter superfamily. Ycf16 family. http://togogenome.org/gene/546414:DEIDE_RS03435 ^@ http://purl.uniprot.org/uniprot/C1D0R2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS06090 ^@ http://purl.uniprot.org/uniprot/C1CUT8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the RNA methyltransferase TrmD family.|||Cytoplasm|||Homodimer.|||Specifically methylates guanosine-37 in various tRNAs. http://togogenome.org/gene/546414:DEIDE_RS07305 ^@ http://purl.uniprot.org/uniprot/C1CVG8 ^@ Domain|||Function|||Similarity ^@ Belongs to the RecA family. RadA subfamily.|||DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.|||Plays a role in repairing double-strand DNA breaks, probably involving stabilizing or processing branched DNA or blocked replication forks.|||The middle region has homology to RecA with ATPase motifs including the RadA KNRFG motif, while the C-terminus is homologous to Lon protease. http://togogenome.org/gene/546414:DEIDE_RS15890 ^@ http://purl.uniprot.org/uniprot/C1D387 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS09365 ^@ http://purl.uniprot.org/uniprot/C1CWM5 ^@ Caution|||Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the FPG family.|||Binds 1 zinc ion per subunit.|||Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer. http://togogenome.org/gene/546414:DEIDE_RS08665 ^@ http://purl.uniprot.org/uniprot/C1CW90 ^@ Similarity ^@ Belongs to the FKBP-type PPIase family. http://togogenome.org/gene/546414:DEIDE_RS18150 ^@ http://purl.uniprot.org/uniprot/C1D267 ^@ Similarity ^@ Belongs to the peptidase S8 family. http://togogenome.org/gene/546414:DEIDE_RS13080 ^@ http://purl.uniprot.org/uniprot/C1D052 ^@ Similarity ^@ Belongs to the acyl-CoA dehydrogenase family. http://togogenome.org/gene/546414:DEIDE_RS10360 ^@ http://purl.uniprot.org/uniprot/C1CX66 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS09360 ^@ http://purl.uniprot.org/uniprot/C1CWM4 ^@ Activity Regulation|||Function|||Miscellaneous|||Similarity|||Subunit ^@ Allosterically activated by GTP, when glutamine is the substrate; GTP has no effect on the reaction when ammonia is the substrate. The allosteric effector GTP functions by stabilizing the protein conformation that binds the tetrahedral intermediate(s) formed during glutamine hydrolysis. Inhibited by the product CTP, via allosteric rather than competitive inhibition.|||Belongs to the CTP synthase family.|||CTPSs have evolved a hybrid strategy for distinguishing between UTP and CTP. The overlapping regions of the product feedback inhibitory and substrate sites recognize a common feature in both compounds, the triphosphate moiety. To differentiate isosteric substrate and product pyrimidine rings, an additional pocket far from the expected kinase/ligase catalytic site, specifically recognizes the cytosine and ribose portions of the product inhibitor.|||Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.|||Homotetramer. http://togogenome.org/gene/546414:DEIDE_RS16925 ^@ http://purl.uniprot.org/uniprot/C1D3K3 ^@ Similarity ^@ Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. http://togogenome.org/gene/546414:DEIDE_RS11245 ^@ http://purl.uniprot.org/uniprot/C1CY05 ^@ Similarity ^@ Belongs to the GSP E family. http://togogenome.org/gene/546414:DEIDE_RS07640 ^@ http://purl.uniprot.org/uniprot/C1CVN4 ^@ Similarity ^@ Belongs to the ribonuclease N1/T1 family. http://togogenome.org/gene/546414:DEIDE_RS01450 ^@ http://purl.uniprot.org/uniprot/C1CZ35 ^@ Similarity ^@ Belongs to the IMPACT family. http://togogenome.org/gene/546414:DEIDE_RS10470 ^@ http://purl.uniprot.org/uniprot/C1CX89 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.|||Binds 1 FMN per subunit.|||Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor.|||Cell membrane|||Monomer. http://togogenome.org/gene/546414:DEIDE_RS15465 ^@ http://purl.uniprot.org/uniprot/C1D307 ^@ Function|||Similarity ^@ Belongs to the peptidase S51 family.|||Exopeptidase that catalyzes the hydrolytic cleavage of multi-L-arginyl-poly-L-aspartic acid (cyanophycin; a water-insoluble reserve polymer) into aspartate-arginine dipeptides. http://togogenome.org/gene/546414:DEIDE_RS12070 ^@ http://purl.uniprot.org/uniprot/C1CYU0 ^@ Similarity ^@ Belongs to the glutamate synthase family. http://togogenome.org/gene/546414:DEIDE_RS10950 ^@ http://purl.uniprot.org/uniprot/C1CXI4 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the D-alanine--D-alanine ligase family.|||Binds 2 magnesium or manganese ions per subunit.|||Cell wall formation.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS06050 ^@ http://purl.uniprot.org/uniprot/C1CUT1 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the FtsA/MreB family.|||Cytoplasm|||Forms membrane-associated dynamic filaments that are essential for cell shape determination. Acts by regulating cell wall synthesis and cell elongation, and thus cell shape. A feedback loop between cell geometry and MreB localization may maintain elongated cell shape by targeting cell wall growth to regions of negative cell wall curvature.|||Forms polymers.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS11550 ^@ http://purl.uniprot.org/uniprot/C1CY64 ^@ Cofactor|||Similarity ^@ Belongs to the malic enzymes family.|||Divalent metal cations. Prefers magnesium or manganese. http://togogenome.org/gene/546414:DEIDE_RS00135 ^@ http://purl.uniprot.org/uniprot/C1CXL7 ^@ Function|||Similarity ^@ Belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.|||Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). http://togogenome.org/gene/546414:DEIDE_RS01400 ^@ http://purl.uniprot.org/uniprot/C1CZ25 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/546414:DEIDE_RS16545 ^@ http://purl.uniprot.org/uniprot/C1D3D1 ^@ Similarity ^@ Belongs to the glutamine synthetase family. http://togogenome.org/gene/546414:DEIDE_RS04090 ^@ http://purl.uniprot.org/uniprot/C1D135 ^@ Similarity ^@ Belongs to the leucine-binding protein family. http://togogenome.org/gene/546414:DEIDE_RS03455 ^@ http://purl.uniprot.org/uniprot/C1D0R6 ^@ Caution|||Function|||PTM|||Similarity ^@ Acetylated. Deacetylation by the SIR2-homolog deacetylase activates the enzyme.|||Belongs to the ATP-dependent AMP-binding enzyme family.|||Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS03285 ^@ http://purl.uniprot.org/uniprot/C1D0N7 ^@ Function|||Similarity|||Subunit ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family.|||Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.|||Homotetramer. http://togogenome.org/gene/546414:DEIDE_RS07650 ^@ http://purl.uniprot.org/uniprot/C1CVN6 ^@ Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation ^@ Bacitracin is thought to be involved in the inhibition of peptidoglycan synthesis by sequestering undecaprenyl diphosphate, thereby reducing the pool of lipid carrier available.|||Belongs to the UppP family.|||Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin.|||Cell membrane http://togogenome.org/gene/546414:DEIDE_RS07485 ^@ http://purl.uniprot.org/uniprot/C1CVK4 ^@ Similarity ^@ Belongs to the peptidase S49 family. http://togogenome.org/gene/546414:DEIDE_RS03360 ^@ http://purl.uniprot.org/uniprot/C1D0Q1 ^@ Similarity ^@ Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. http://togogenome.org/gene/546414:DEIDE_RS06740 ^@ http://purl.uniprot.org/uniprot/C1CV59 ^@ Function|||Similarity|||Subunit ^@ Belongs to the succinate/malate CoA ligase alpha subunit family.|||Heterotetramer of two alpha and two beta subunits.|||Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. http://togogenome.org/gene/546414:DEIDE_RS12505 ^@ http://purl.uniprot.org/uniprot/C1CZG0 ^@ Similarity ^@ Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. http://togogenome.org/gene/546414:DEIDE_RS12645 ^@ http://purl.uniprot.org/uniprot/C1CZI9 ^@ Caution|||Function|||Similarity ^@ Belongs to the aspartate/glutamate racemases family.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Provides the (R)-glutamate required for cell wall biosynthesis. http://togogenome.org/gene/546414:DEIDE_RS16850 ^@ http://purl.uniprot.org/uniprot/C1D3I8 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/546414:DEIDE_RS17210 ^@ http://purl.uniprot.org/uniprot/C1D3R0 ^@ Cofactor|||Similarity ^@ Belongs to the RtcB family.|||Binds 2 manganese ions per subunit. http://togogenome.org/gene/546414:DEIDE_RS12750 ^@ http://purl.uniprot.org/uniprot/C1CZL0 ^@ Similarity ^@ Belongs to the LDH/MDH superfamily. http://togogenome.org/gene/546414:DEIDE_RS00295 ^@ http://purl.uniprot.org/uniprot/C1CXP6 ^@ Similarity ^@ Belongs to the glycosyl hydrolase 1 family. http://togogenome.org/gene/546414:DEIDE_RS02765 ^@ http://purl.uniprot.org/uniprot/C1D0E2 ^@ Subcellular Location Annotation ^@ Nucleus http://togogenome.org/gene/546414:DEIDE_RS05750 ^@ http://purl.uniprot.org/uniprot/C1CUL9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS17740 ^@ http://purl.uniprot.org/uniprot/C1D406 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. http://togogenome.org/gene/546414:DEIDE_RS04480 ^@ http://purl.uniprot.org/uniprot/C1D1B3 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS15505 ^@ http://purl.uniprot.org/uniprot/C1D315 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ABC-3 integral membrane protein family.|||Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS11570 ^@ http://purl.uniprot.org/uniprot/C1CY68 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the HisA/HisF family.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS02065 ^@ http://purl.uniprot.org/uniprot/C1CZT1 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.|||Binds 1 zinc ion per subunit.|||Cytoplasm|||Monomer. Associates with 30S ribosomal subunit, binds 16S rRNA.|||One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit. http://togogenome.org/gene/546414:DEIDE_RS06105 ^@ http://purl.uniprot.org/uniprot/C1CUU1 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bS16 family. http://togogenome.org/gene/546414:DEIDE_RS07080 ^@ http://purl.uniprot.org/uniprot/C1CVC5 ^@ Function|||Similarity ^@ Belongs to the NusB family.|||Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. http://togogenome.org/gene/546414:DEIDE_RS06120 ^@ http://purl.uniprot.org/uniprot/C1CUU4 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ABC transporter superfamily.|||Cell membrane|||Homodimer. Forms a membrane-associated complex with FtsX.|||Part of the ABC transporter FtsEX involved in cellular division. http://togogenome.org/gene/546414:DEIDE_RS00420 ^@ http://purl.uniprot.org/uniprot/C1CXS0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the lyase 1 family. Argininosuccinate lyase subfamily.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS10955 ^@ http://purl.uniprot.org/uniprot/C1CXI5 ^@ Similarity ^@ Belongs to the bacterial solute-binding protein 5 family. http://togogenome.org/gene/546414:DEIDE_RS10840 ^@ http://purl.uniprot.org/uniprot/C1CXG3 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL2 family.|||One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome.|||Part of the 50S ribosomal subunit. Forms a bridge to the 30S subunit in the 70S ribosome. http://togogenome.org/gene/546414:DEIDE_RS03910 ^@ http://purl.uniprot.org/uniprot/C1D102 ^@ Similarity ^@ Belongs to the Nudix hydrolase family. http://togogenome.org/gene/546414:DEIDE_RS18115 ^@ http://purl.uniprot.org/uniprot/C1D1W6 ^@ Similarity ^@ Belongs to the DNA/RNA non-specific endonuclease family. http://togogenome.org/gene/546414:DEIDE_RS05085 ^@ http://purl.uniprot.org/uniprot/C1D1N3 ^@ Similarity ^@ Belongs to the glycosyl hydrolase 13 family. http://togogenome.org/gene/546414:DEIDE_RS12670 ^@ http://purl.uniprot.org/uniprot/C1CZJ4 ^@ Function ^@ Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. http://togogenome.org/gene/546414:DEIDE_RS04190 ^@ http://purl.uniprot.org/uniprot/C1D154 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the radical SAM superfamily. Lipoyl synthase family.|||Binds 2 [4Fe-4S] clusters per subunit. One cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.|||Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS06535 ^@ http://purl.uniprot.org/uniprot/C1CV19 ^@ Similarity ^@ Belongs to the helicase family. RecQ subfamily. http://togogenome.org/gene/546414:DEIDE_RS10810 ^@ http://purl.uniprot.org/uniprot/C1CXF7 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS17 family.|||One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.|||Part of the 30S ribosomal subunit. http://togogenome.org/gene/546414:DEIDE_RS06575 ^@ http://purl.uniprot.org/uniprot/C1CV27 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the triosephosphate isomerase family.|||Cytoplasm|||Homodimer.|||Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P). http://togogenome.org/gene/546414:DEIDE_RS16270 ^@ http://purl.uniprot.org/uniprot/C1D469 ^@ Similarity ^@ Belongs to the aspartate/glutamate racemases family. http://togogenome.org/gene/546414:DEIDE_RS06285 ^@ http://purl.uniprot.org/uniprot/C1CUX6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.|||Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS01305 ^@ http://purl.uniprot.org/uniprot/C1CZ04 ^@ Similarity ^@ Belongs to the Nudix hydrolase family. http://togogenome.org/gene/546414:DEIDE_RS05055 ^@ http://purl.uniprot.org/uniprot/C1D1M7 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. http://togogenome.org/gene/546414:DEIDE_RS02965 ^@ http://purl.uniprot.org/uniprot/C1D0I1 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I subunit 4L family.|||Cell membrane|||NDH-1 is composed of 15 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/546414:DEIDE_RS09250 ^@ http://purl.uniprot.org/uniprot/C1CWK2 ^@ Cofactor|||Similarity ^@ Belongs to the Fur family.|||Binds 1 Mn(2+) or Fe(2+) ion per subunit.|||Binds 1 zinc ion per subunit. http://togogenome.org/gene/546414:DEIDE_RS03500 ^@ http://purl.uniprot.org/uniprot/C1D0S5 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL1 family.|||Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.|||Part of the 50S ribosomal subunit.|||Protein L1 is also a translational repressor protein, it controls the translation of the L11 operon by binding to its mRNA. http://togogenome.org/gene/546414:DEIDE_RS13105 ^@ http://purl.uniprot.org/uniprot/C1D057 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the tRNA pseudouridine synthase TruA family.|||Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS00930 ^@ http://purl.uniprot.org/uniprot/C1CYE7 ^@ Similarity ^@ Belongs to the 3-hydroxyacyl-CoA dehydrogenase family. http://togogenome.org/gene/546414:DEIDE_RS04475 ^@ http://purl.uniprot.org/uniprot/C1D1B2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS07265 ^@ http://purl.uniprot.org/uniprot/C1CVG1 ^@ Similarity ^@ Belongs to the leucine-binding protein family. http://togogenome.org/gene/546414:DEIDE_RS08600 ^@ http://purl.uniprot.org/uniprot/C1CW77 ^@ Similarity ^@ Belongs to the acyl-CoA dehydrogenase family. http://togogenome.org/gene/546414:DEIDE_RS05090 ^@ http://purl.uniprot.org/uniprot/C1D1N4 ^@ Function|||Similarity|||Subunit ^@ Belongs to the PEPCase type 1 family.|||Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.|||Homotetramer. http://togogenome.org/gene/546414:DEIDE_RS03010 ^@ http://purl.uniprot.org/uniprot/C1D0J0 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the protoporphyrinogen/coproporphyrinogen oxidase family. Coproporphyrinogen III oxidase subfamily.|||Cytoplasm|||Involved in coproporphyrin-dependent heme b biosynthesis. Catalyzes the oxidation of coproporphyrinogen III to coproporphyrin III. http://togogenome.org/gene/546414:DEIDE_RS17620 ^@ http://purl.uniprot.org/uniprot/C1D3Y6 ^@ Subcellular Location Annotation ^@ Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS05410 ^@ http://purl.uniprot.org/uniprot/C1D1U5 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the gamma-glutamyl phosphate reductase family.|||Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS16480 ^@ http://purl.uniprot.org/uniprot/C1D3B9 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. http://togogenome.org/gene/546414:DEIDE_RS17680 ^@ http://purl.uniprot.org/uniprot/C1D3Z7 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS10425 ^@ http://purl.uniprot.org/uniprot/C1CX80 ^@ Function|||Similarity ^@ Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.|||Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.|||Regulates the transcription of the pyrimidine nucleotide (pyr) operon in response to exogenous pyrimidines. http://togogenome.org/gene/546414:DEIDE_RS04735 ^@ http://purl.uniprot.org/uniprot/C1D1G3 ^@ Similarity ^@ Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. http://togogenome.org/gene/546414:DEIDE_RS14150 ^@ http://purl.uniprot.org/uniprot/C1D290 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS04870 ^@ http://purl.uniprot.org/uniprot/C1D1J0 ^@ Similarity ^@ Belongs to the glycosyl hydrolase 13 family. http://togogenome.org/gene/546414:DEIDE_RS00810 ^@ http://purl.uniprot.org/uniprot/C1CYC7 ^@ Similarity ^@ Belongs to the UbiD family. http://togogenome.org/gene/546414:DEIDE_RS04365 ^@ http://purl.uniprot.org/uniprot/C1D188 ^@ Similarity ^@ Belongs to the sigma-70 factor family. ECF subfamily. http://togogenome.org/gene/546414:DEIDE_RS01865 ^@ http://purl.uniprot.org/uniprot/C1CZB3 ^@ Function ^@ This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. http://togogenome.org/gene/546414:DEIDE_RS03830 ^@ http://purl.uniprot.org/uniprot/C1D0Y5 ^@ Subcellular Location Annotation ^@ Cell outer membrane|||Periplasm http://togogenome.org/gene/546414:DEIDE_RS04530 ^@ http://purl.uniprot.org/uniprot/C1D1C3 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the NDK family.|||Cytoplasm|||Homotetramer.|||Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. http://togogenome.org/gene/546414:DEIDE_RS15575 ^@ http://purl.uniprot.org/uniprot/C1D328 ^@ Cofactor|||Similarity ^@ Belongs to the DNA repair enzymes AP/ExoA family.|||Probably binds two magnesium or manganese ions per subunit. http://togogenome.org/gene/546414:DEIDE_RS08520 ^@ http://purl.uniprot.org/uniprot/C1CW60 ^@ Similarity ^@ Belongs to the AHA1 family. http://togogenome.org/gene/546414:DEIDE_RS07045 ^@ http://purl.uniprot.org/uniprot/C1CVB8 ^@ Similarity ^@ Belongs to the leucine-binding protein family. http://togogenome.org/gene/546414:DEIDE_RS02530 ^@ http://purl.uniprot.org/uniprot/C1D023 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the P-Pant transferase superfamily. AcpS family.|||Cytoplasm|||Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein. http://togogenome.org/gene/546414:DEIDE_RS09760 ^@ http://purl.uniprot.org/uniprot/C1CWV2 ^@ Similarity ^@ Belongs to the disproportionating enzyme family. http://togogenome.org/gene/546414:DEIDE_RS09095 ^@ http://purl.uniprot.org/uniprot/C1CWH2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS04060 ^@ http://purl.uniprot.org/uniprot/C1D129 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the CoaE family.|||Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS11100 ^@ http://purl.uniprot.org/uniprot/C1CXX5 ^@ Similarity ^@ Belongs to the SufE family. http://togogenome.org/gene/546414:DEIDE_RS10775 ^@ http://purl.uniprot.org/uniprot/C1CXF0 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL18 family.|||Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S and 23S rRNAs.|||This is one of the proteins that bind and probably mediate the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. http://togogenome.org/gene/546414:DEIDE_RS05660 ^@ http://purl.uniprot.org/uniprot/C1CUK1 ^@ Similarity ^@ Belongs to the Skp family. http://togogenome.org/gene/546414:DEIDE_RS02920 ^@ http://purl.uniprot.org/uniprot/C1D0H2 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I 20 kDa subunit family.|||Binds 1 [4Fe-4S] cluster.|||Cell membrane|||NDH-1 is composed of 15 different subunits. Subunits NuoB, C, D, E, F, and G constitute the peripheral sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/546414:DEIDE_RS09820 ^@ http://purl.uniprot.org/uniprot/C1CWW3 ^@ Similarity ^@ Belongs to the thiolase-like superfamily. Thiolase family. http://togogenome.org/gene/546414:DEIDE_RS16275 ^@ http://purl.uniprot.org/uniprot/C1D470 ^@ Similarity ^@ Belongs to the ACC deaminase/D-cysteine desulfhydrase family. http://togogenome.org/gene/546414:DEIDE_RS13940 ^@ http://purl.uniprot.org/uniprot/C1D247 ^@ Similarity ^@ Belongs to the SIMIBI class G3E GTPase family. ZNG1 subfamily. http://togogenome.org/gene/546414:DEIDE_RS09120 ^@ http://purl.uniprot.org/uniprot/C1CWH6 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS03240 ^@ http://purl.uniprot.org/uniprot/C1D0N0 ^@ Similarity ^@ Belongs to the UPF0301 (AlgH) family. http://togogenome.org/gene/546414:DEIDE_RS09810 ^@ http://purl.uniprot.org/uniprot/C1CWW1 ^@ Function|||Similarity ^@ Belongs to the pyruvate, phosphate/water dikinase regulatory protein family. PSRP subfamily.|||Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation. http://togogenome.org/gene/546414:DEIDE_RS01120 ^@ http://purl.uniprot.org/uniprot/C1CYI4 ^@ Similarity ^@ Belongs to the Nth/MutY family. http://togogenome.org/gene/546414:DEIDE_RS14580 ^@ http://purl.uniprot.org/uniprot/C1D2I1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.|||Cell membrane http://togogenome.org/gene/546414:DEIDE_RS02815 ^@ http://purl.uniprot.org/uniprot/C1D0F1 ^@ Similarity ^@ Belongs to the peptidase C56 family. http://togogenome.org/gene/546414:DEIDE_RS03200 ^@ http://purl.uniprot.org/uniprot/C1D0M4 ^@ Function|||Similarity|||Subunit ^@ Belongs to the Mrp/NBP35 ATP-binding proteins family.|||Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP.|||Homodimer.|||In the C-terminal section; belongs to the Mrp/NBP35 ATP-binding proteins family.|||In the N-terminal section; belongs to the MIP18 family. http://togogenome.org/gene/546414:DEIDE_RS17025 ^@ http://purl.uniprot.org/uniprot/C1D3M4 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS08535 ^@ http://purl.uniprot.org/uniprot/C1CW63 ^@ Similarity ^@ Belongs to the RelA/SpoT family. http://togogenome.org/gene/546414:DEIDE_RS16615 ^@ http://purl.uniprot.org/uniprot/C1D3E8 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS04950 ^@ http://purl.uniprot.org/uniprot/C1D1K6 ^@ Similarity ^@ Belongs to the glycogen phosphorylase family. http://togogenome.org/gene/546414:DEIDE_RS10880 ^@ http://purl.uniprot.org/uniprot/C1CXH1 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS7 family.|||One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA.|||Part of the 30S ribosomal subunit. Contacts proteins S9 and S11. http://togogenome.org/gene/546414:DEIDE_RS11605 ^@ http://purl.uniprot.org/uniprot/C1CY74 ^@ Similarity ^@ Belongs to the enoyl-CoA hydratase/isomerase family. http://togogenome.org/gene/546414:DEIDE_RS05215 ^@ http://purl.uniprot.org/uniprot/C1D1Q9 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the tRNA(Ile)-lysidine synthase family.|||Cytoplasm|||Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine.|||The N-terminal region contains the highly conserved SGGXDS motif, predicted to be a P-loop motif involved in ATP binding. http://togogenome.org/gene/546414:DEIDE_RS16070 ^@ http://purl.uniprot.org/uniprot/C1D431 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/546414:DEIDE_RS04800 ^@ http://purl.uniprot.org/uniprot/C1D1H6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the CcmC/CycZ/HelC family.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS15015 ^@ http://purl.uniprot.org/uniprot/C1D2R8 ^@ Subcellular Location Annotation ^@ Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS15610 ^@ http://purl.uniprot.org/uniprot/C1D335 ^@ Cofactor ^@ Binds 1 zinc ion per subunit. http://togogenome.org/gene/546414:DEIDE_RS06875 ^@ http://purl.uniprot.org/uniprot/C1CV85 ^@ Similarity ^@ Belongs to the peptidase S8 family. http://togogenome.org/gene/546414:DEIDE_RS04900 ^@ http://purl.uniprot.org/uniprot/C1D1J7 ^@ Similarity ^@ Belongs to the ClpA/ClpB family. http://togogenome.org/gene/546414:DEIDE_RS03855 ^@ http://purl.uniprot.org/uniprot/C1D0Z0 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the pyridoxamine 5'-phosphate oxidase family.|||Binds 1 FMN per subunit.|||Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).|||Homodimer. http://togogenome.org/gene/546414:DEIDE_RS15565 ^@ http://purl.uniprot.org/uniprot/C1D326 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the CobS family.|||Cell membrane|||Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS10045 ^@ http://purl.uniprot.org/uniprot/C1CX03 ^@ Similarity ^@ Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. http://togogenome.org/gene/546414:DEIDE_RS00630 ^@ http://purl.uniprot.org/uniprot/C1CY96 ^@ Similarity ^@ Belongs to the peptidase S1C family. http://togogenome.org/gene/546414:DEIDE_RS15400 ^@ http://purl.uniprot.org/uniprot/C1D2Z4 ^@ Similarity ^@ Belongs to the carotenoid/retinoid oxidoreductase family. http://togogenome.org/gene/546414:DEIDE_RS02435 ^@ http://purl.uniprot.org/uniprot/C1D005 ^@ Similarity ^@ Belongs to the enoyl-CoA hydratase/isomerase family. http://togogenome.org/gene/546414:DEIDE_RS12845 ^@ http://purl.uniprot.org/uniprot/C1CZM9 ^@ Function|||Similarity ^@ Belongs to the MqnA/MqnD family. MqnA subfamily.|||Catalyzes the dehydration of chorismate into 3-[(1-carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2). http://togogenome.org/gene/546414:DEIDE_RS09860 ^@ http://purl.uniprot.org/uniprot/C1CWX0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the acetokinase family.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS17160 ^@ http://purl.uniprot.org/uniprot/C1D3Q0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/546414:DEIDE_RS11145 ^@ http://purl.uniprot.org/uniprot/C1CXY4 ^@ Function|||Similarity ^@ Belongs to the 2H phosphoesterase superfamily. ThpR family.|||Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'-phosphomonoester. http://togogenome.org/gene/546414:DEIDE_RS07945 ^@ http://purl.uniprot.org/uniprot/C1CVU6 ^@ Similarity ^@ Belongs to the BshC family. http://togogenome.org/gene/546414:DEIDE_RS01770 ^@ http://purl.uniprot.org/uniprot/C1CZ94 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the UvrB family.|||Cytoplasm|||Forms a heterotetramer with UvrA during the search for lesions. Interacts with UvrC in an incision complex.|||The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage.|||The beta-hairpin motif is involved in DNA binding. http://togogenome.org/gene/546414:DEIDE_RS10820 ^@ http://purl.uniprot.org/uniprot/C1CXF9 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL16 family.|||Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs.|||Part of the 50S ribosomal subunit. http://togogenome.org/gene/546414:DEIDE_RS13275 ^@ http://purl.uniprot.org/uniprot/C1D090 ^@ Similarity ^@ Belongs to the CFA/CMAS family. http://togogenome.org/gene/546414:DEIDE_RS00030 ^@ http://purl.uniprot.org/uniprot/C1CXJ5 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.|||Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr).|||Cytoplasm|||Homodimer. http://togogenome.org/gene/546414:DEIDE_RS02730 ^@ http://purl.uniprot.org/uniprot/C1D0D5 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the NrdR family.|||Binds 1 zinc ion.|||Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR-boxes. http://togogenome.org/gene/546414:DEIDE_RS12705 ^@ http://purl.uniprot.org/uniprot/C1CZK1 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control.|||Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.|||Cytoplasm|||Monomer. http://togogenome.org/gene/546414:DEIDE_RS02380 ^@ http://purl.uniprot.org/uniprot/C1CZZ4 ^@ Similarity ^@ Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family. http://togogenome.org/gene/546414:DEIDE_RS13695 ^@ http://purl.uniprot.org/uniprot/C1D200 ^@ Function|||Similarity|||Subunit ^@ Catalyzes the ATP-dependent polymerization of arginine and aspartate to multi-L-arginyl-poly-L-aspartic acid (cyanophycin; a water-insoluble reserve polymer).|||Homodimer.|||In the C-terminal section; belongs to the MurCDEF family. http://togogenome.org/gene/546414:DEIDE_RS00385 ^@ http://purl.uniprot.org/uniprot/C1CXR4 ^@ Cofactor|||Similarity|||Subunit ^@ Belongs to the CarB family.|||Binds 4 Mg(2+) or Mn(2+) ions per subunit.|||Composed of two chains; the small (or glutamine) chain promotes the hydrolysis of glutamine to ammonia, which is used by the large (or ammonia) chain to synthesize carbamoyl phosphate. http://togogenome.org/gene/546414:DEIDE_RS10020 ^@ http://purl.uniprot.org/uniprot/C1CWZ9 ^@ Cofactor|||Similarity ^@ Belongs to the peptidase M42 family.|||Binds 2 divalent metal cations per subunit. http://togogenome.org/gene/546414:DEIDE_RS04700 ^@ http://purl.uniprot.org/uniprot/C1D1F7 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/546414:DEIDE_RS17215 ^@ http://purl.uniprot.org/uniprot/C1D3R1 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS10910 ^@ http://purl.uniprot.org/uniprot/C1CXH5 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.|||Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS17155 ^@ http://purl.uniprot.org/uniprot/C1D3P9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/546414:DEIDE_RS03605 ^@ http://purl.uniprot.org/uniprot/C1D0U2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the UPF0073 (Hly-III) family.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS04230 ^@ http://purl.uniprot.org/uniprot/C1D162 ^@ Similarity ^@ Belongs to the band 7/mec-2 family. http://togogenome.org/gene/546414:DEIDE_RS00205 ^@ http://purl.uniprot.org/uniprot/C1CXM9 ^@ Similarity ^@ Belongs to the 2-oxoacid dehydrogenase family. http://togogenome.org/gene/546414:DEIDE_RS08330 ^@ http://purl.uniprot.org/uniprot/C1CW22 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the sigma-70 factor family. RpoD/SigA subfamily.|||Cytoplasm|||Interacts transiently with the RNA polymerase catalytic core.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. http://togogenome.org/gene/546414:DEIDE_RS07680 ^@ http://purl.uniprot.org/uniprot/C1CVP2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the CDS family.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS06710 ^@ http://purl.uniprot.org/uniprot/C1CV53 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the Rho family.|||Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template.|||Homohexamer. The homohexamer assembles into an open ring structure.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS10825 ^@ http://purl.uniprot.org/uniprot/C1CXG0 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS3 family.|||Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation.|||Part of the 30S ribosomal subunit. Forms a tight complex with proteins S10 and S14. http://togogenome.org/gene/546414:DEIDE_RS05265 ^@ http://purl.uniprot.org/uniprot/C1D1R8 ^@ Domain|||Function|||Induction|||Similarity|||Subunit ^@ Belongs to the RAD52 family.|||Induced to high levels following extreme ionizing radiation exposure. Also highly induced in response to desiccation stress (By similarity).|||The N-terminal domain (1-160) is sufficient to pilot the oligomerization process and to bind specifically single-stranded DNA, but is not functional in vivo.|||The truncated form (1-160) of DdrA forms heptameric rings that can assemble into a 3-ring structure.|||ssDNA-binding protein that contributes to the ionizing radiation resistance of D.deserti. Plays a role in DNA repair and genome reconstitution, in a RecA-independent process, since DdrA is essential for recovery from severe genomic fragmentation as a result of exposure to severe levels of ionizing radiation in an environment lacking nutrients (Probable). In vitro, binds to the 3'-ends of single-stranded DNA, and probably protects them from nuclease degradation. Thus, DdrA is part of a DNA end-protection system that helps to preserve genome integrity following irradiation or desiccation. http://togogenome.org/gene/546414:DEIDE_RS06235 ^@ http://purl.uniprot.org/uniprot/C1CUW6 ^@ Similarity ^@ Belongs to the MreC family. http://togogenome.org/gene/546414:DEIDE_RS01900 ^@ http://purl.uniprot.org/uniprot/C1CZC0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the exbB/tolQ family.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS06325 ^@ http://purl.uniprot.org/uniprot/C1CUY4 ^@ Similarity ^@ Belongs to the GARS family. http://togogenome.org/gene/546414:DEIDE_RS05595 ^@ http://purl.uniprot.org/uniprot/C1CUI9 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ A Gly-cisPro motif from one monomer fits into the active site of the other monomer to allow specific chiral rejection of L-amino acids.|||An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA-based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality.|||Belongs to the DTD family.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/546414:DEIDE_RS10625 ^@ http://purl.uniprot.org/uniprot/C1CXC0 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS09000 ^@ http://purl.uniprot.org/uniprot/C1CWF4 ^@ Similarity ^@ Belongs to the FMN-dependent alpha-hydroxy acid dehydrogenase family. http://togogenome.org/gene/546414:DEIDE_RS06670 ^@ http://purl.uniprot.org/uniprot/C1CV45 ^@ Cofactor|||Similarity ^@ Belongs to the mandelate racemase/muconate lactonizing enzyme family.|||Binds 1 Mg(2+) ion per subunit. http://togogenome.org/gene/546414:DEIDE_RS09090 ^@ http://purl.uniprot.org/uniprot/C1CWH1 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the aspartate-semialdehyde dehydrogenase family.|||Catalyzes the NADPH-dependent formation of L-aspartate-semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl-4-phosphate.|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS16435 ^@ http://purl.uniprot.org/uniprot/C1D4A8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS00020 ^@ http://purl.uniprot.org/uniprot/C1CXJ3 ^@ Activity Regulation|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the enolase family.|||Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.|||Cell surface|||Cytoplasm|||Secreted|||The covalent binding to the substrate causes inactivation of the enzyme, and possibly serves as a signal for the export of the protein. http://togogenome.org/gene/546414:DEIDE_RS11685 ^@ http://purl.uniprot.org/uniprot/C1CYL7 ^@ Similarity ^@ Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. http://togogenome.org/gene/546414:DEIDE_RS13385 ^@ http://purl.uniprot.org/uniprot/C1D0B1 ^@ Function|||Similarity ^@ Belongs to the BCKDHA family.|||The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3). http://togogenome.org/gene/546414:DEIDE_RS08630 ^@ http://purl.uniprot.org/uniprot/C1CW83 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the QueA family.|||Cytoplasm|||Monomer.|||Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). http://togogenome.org/gene/546414:DEIDE_RS02710 ^@ http://purl.uniprot.org/uniprot/C1D0D1 ^@ Function|||Similarity ^@ Belongs to the helicase family. DnaB subfamily.|||Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. http://togogenome.org/gene/546414:DEIDE_RS08060 ^@ http://purl.uniprot.org/uniprot/C1CVW9 ^@ Similarity ^@ Belongs to the sulfate adenylyltransferase family. http://togogenome.org/gene/546414:DEIDE_RS17050 ^@ http://purl.uniprot.org/uniprot/C1D3M9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/546414:DEIDE_RS07690 ^@ http://purl.uniprot.org/uniprot/C1CVP4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the peptidase M50B family.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS05130 ^@ http://purl.uniprot.org/uniprot/C1D1P2 ^@ Similarity ^@ Belongs to the YciI family. http://togogenome.org/gene/546414:DEIDE_RS01630 ^@ http://purl.uniprot.org/uniprot/C1CZ67 ^@ Similarity ^@ Belongs to the creatininase superfamily. http://togogenome.org/gene/546414:DEIDE_RS03275 ^@ http://purl.uniprot.org/uniprot/C1D0N5 ^@ Similarity ^@ Belongs to the fabD family. http://togogenome.org/gene/546414:DEIDE_RS08925 ^@ http://purl.uniprot.org/uniprot/C1CWE1 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the RbfA family.|||Cytoplasm|||Monomer. Binds 30S ribosomal subunits, but not 50S ribosomal subunits or 70S ribosomes.|||One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. http://togogenome.org/gene/546414:DEIDE_RS16960 ^@ http://purl.uniprot.org/uniprot/C1D3L0 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS02400 ^@ http://purl.uniprot.org/uniprot/C1CZZ8 ^@ Subcellular Location Annotation ^@ Cell outer membrane|||Periplasm http://togogenome.org/gene/546414:DEIDE_RS06370 ^@ http://purl.uniprot.org/uniprot/C1CUZ3 ^@ Similarity ^@ Belongs to the methylenetetrahydrofolate reductase family. http://togogenome.org/gene/546414:DEIDE_RS07095 ^@ http://purl.uniprot.org/uniprot/C1CVC8 ^@ Similarity ^@ Belongs to the BMP lipoprotein family. http://togogenome.org/gene/546414:DEIDE_RS10790 ^@ http://purl.uniprot.org/uniprot/C1CXF3 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS14 family. Zinc-binding uS14 subfamily.|||Binds 1 zinc ion per subunit.|||Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.|||Part of the 30S ribosomal subunit. Contacts proteins S3 and S10. http://togogenome.org/gene/546414:DEIDE_RS10170 ^@ http://purl.uniprot.org/uniprot/C1CX27 ^@ Similarity ^@ Belongs to the Nudix hydrolase family. http://togogenome.org/gene/546414:DEIDE_RS04995 ^@ http://purl.uniprot.org/uniprot/C1D1L5 ^@ Similarity ^@ Belongs to the pseudouridine synthase RsuA family. http://togogenome.org/gene/546414:DEIDE_RS03145 ^@ http://purl.uniprot.org/uniprot/C1D0L5 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the MnmG family. TrmFO subfamily.|||Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS16860 ^@ http://purl.uniprot.org/uniprot/C1D3J0 ^@ Similarity ^@ Belongs to the SCO1/2 family. http://togogenome.org/gene/546414:DEIDE_RS09290 ^@ http://purl.uniprot.org/uniprot/C1CWL0 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS10980 ^@ http://purl.uniprot.org/uniprot/C1CXJ0 ^@ Domain|||Function|||Miscellaneous|||Similarity|||Subunit ^@ Belongs to the glutamyl-tRNA reductase family.|||Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).|||During catalysis, the active site Cys acts as a nucleophile attacking the alpha-carbonyl group of tRNA-bound glutamate with the formation of a thioester intermediate between enzyme and glutamate, and the concomitant release of tRNA(Glu). The thioester intermediate is finally reduced by direct hydride transfer from NADPH, to form the product GSA.|||Homodimer.|||Possesses an unusual extended V-shaped dimeric structure with each monomer consisting of three distinct domains arranged along a curved 'spinal' alpha-helix. The N-terminal catalytic domain specifically recognizes the glutamate moiety of the substrate. The second domain is the NADPH-binding domain, and the third C-terminal domain is responsible for dimerization. http://togogenome.org/gene/546414:DEIDE_RS10335 ^@ http://purl.uniprot.org/uniprot/C1CX61 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TatA/E family.|||Cell membrane|||Forms a complex with TatC.|||Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. http://togogenome.org/gene/546414:DEIDE_RS10765 ^@ http://purl.uniprot.org/uniprot/C1CXE8 ^@ Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL30 family.|||Part of the 50S ribosomal subunit. http://togogenome.org/gene/546414:DEIDE_RS14445 ^@ http://purl.uniprot.org/uniprot/C1D2F4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS01265 ^@ http://purl.uniprot.org/uniprot/C1CYL2 ^@ Cofactor|||Function|||Similarity ^@ Binds 1 zinc ion per subunit.|||Binds 2 divalent metal cations per subunit. Magnesium or manganese.|||Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.|||Catalyzes the conversion of GTP to 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate.|||In the C-terminal section; belongs to the GTP cyclohydrolase II family.|||In the N-terminal section; belongs to the DHBP synthase family. http://togogenome.org/gene/546414:DEIDE_RS14510 ^@ http://purl.uniprot.org/uniprot/C1D2G5 ^@ Caution|||Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Aquaporins contain two tandem repeats each containing three membrane-spanning domains and a pore-forming loop with the signature motif Asn-Pro-Ala (NPA).|||Belongs to the MIP/aquaporin (TC 1.A.8) family.|||Cell membrane|||Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity.|||Homotetramer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS10930 ^@ http://purl.uniprot.org/uniprot/C1CXI0 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS10380 ^@ http://purl.uniprot.org/uniprot/C1CX71 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the EPSP synthase family. MurA subfamily.|||Cell wall formation. Adds enolpyruvyl to UDP-N-acetylglucosamine.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS12370 ^@ http://purl.uniprot.org/uniprot/C1CZD3 ^@ Similarity ^@ Belongs to the peptidase S1C family. http://togogenome.org/gene/546414:DEIDE_RS05100 ^@ http://purl.uniprot.org/uniprot/C1D1N6 ^@ Similarity ^@ Belongs to the universal stress protein A family. http://togogenome.org/gene/546414:DEIDE_RS06645 ^@ http://purl.uniprot.org/uniprot/C1CV40 ^@ Similarity ^@ Belongs to the metallophosphoesterase superfamily. YfcE family. http://togogenome.org/gene/546414:DEIDE_RS00885 ^@ http://purl.uniprot.org/uniprot/C1CYD9 ^@ Cofactor|||Function|||Miscellaneous|||Similarity|||Subunit ^@ Belongs to the HMBS family.|||Binds 1 dipyrromethane group covalently.|||Monomer.|||Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.|||The porphobilinogen subunits are added to the dipyrromethane group. http://togogenome.org/gene/546414:DEIDE_RS11670 ^@ http://purl.uniprot.org/uniprot/C1CYL4 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS14295 ^@ http://purl.uniprot.org/uniprot/C1D2C5 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the RecA family.|||Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS06910 ^@ http://purl.uniprot.org/uniprot/C1CV91 ^@ Cofactor ^@ Can also use Mn(2+) ion. http://togogenome.org/gene/546414:DEIDE_RS11780 ^@ http://purl.uniprot.org/uniprot/C1CYN6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the drug/metabolite transporter (DMT) superfamily. Small multidrug resistance (SMR) (TC 2.A.7.1) family.|||Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS15600 ^@ http://purl.uniprot.org/uniprot/C1D333 ^@ Similarity ^@ In the C-terminal section; belongs to the prokaryotic molybdopterin-containing oxidoreductase family. http://togogenome.org/gene/546414:DEIDE_RS02980 ^@ http://purl.uniprot.org/uniprot/C1D0I4 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I subunit 2 family.|||Cell membrane|||Membrane|||NDH-1 is composed of 15 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/546414:DEIDE_RS16475 ^@ http://purl.uniprot.org/uniprot/C1D3B8 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the peptidase M32 family.|||Binds 1 zinc ion per subunit.|||Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. http://togogenome.org/gene/546414:DEIDE_RS07400 ^@ http://purl.uniprot.org/uniprot/C1CVI7 ^@ Function|||Similarity|||Subunit ^@ Belongs to the Orn/Lys/Arg decarboxylase class-II family. LysA subfamily.|||Homodimer.|||Specifically catalyzes the decarboxylation of meso-diaminopimelate (meso-DAP) to L-lysine. http://togogenome.org/gene/546414:DEIDE_RS05175 ^@ http://purl.uniprot.org/uniprot/C1D1Q1 ^@ Function|||Similarity|||Subunit ^@ Belongs to the anthranilate synthase component I family.|||Heterotetramer consisting of two non-identical subunits: a beta subunit (TrpG) and a large alpha subunit (TrpE).|||Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia. http://togogenome.org/gene/546414:DEIDE_RS04520 ^@ http://purl.uniprot.org/uniprot/C1D1C1 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS09575 ^@ http://purl.uniprot.org/uniprot/C1CWR8 ^@ Similarity ^@ Belongs to the metallophosphoesterase superfamily. YfcE family. http://togogenome.org/gene/546414:DEIDE_RS01440 ^@ http://purl.uniprot.org/uniprot/C1CZ33 ^@ Caution|||Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the IspF family.|||Binds 1 divalent metal cation per subunit.|||Homotrimer.|||Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS15545 ^@ http://purl.uniprot.org/uniprot/C1D322 ^@ Similarity ^@ Belongs to the carbon-nitrogen hydrolase superfamily. Nitrilase family. http://togogenome.org/gene/546414:DEIDE_RS00025 ^@ http://purl.uniprot.org/uniprot/C1CXJ4 ^@ Similarity ^@ Belongs to the pyruvate kinase family. http://togogenome.org/gene/546414:DEIDE_RS05755 ^@ http://purl.uniprot.org/uniprot/C1CUM0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS16465 ^@ http://purl.uniprot.org/uniprot/C1D3B6 ^@ Function|||Similarity ^@ Belongs to the ketopantoate reductase family.|||Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. http://togogenome.org/gene/546414:DEIDE_RS08800 ^@ http://purl.uniprot.org/uniprot/C1CWB4 ^@ PTM|||Similarity|||Subcellular Location Annotation ^@ Belongs to the PAL/histidase family.|||Contains an active site 4-methylidene-imidazol-5-one (MIO), which is formed autocatalytically by cyclization and dehydration of residues Ala-Ser-Gly.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS01905 ^@ http://purl.uniprot.org/uniprot/C1CZC1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ExbD/TolR family.|||Cell membrane http://togogenome.org/gene/546414:DEIDE_RS08555 ^@ http://purl.uniprot.org/uniprot/C1CW67 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS01655 ^@ http://purl.uniprot.org/uniprot/C1CZ72 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the acetylglutamate kinase family. ArgB subfamily.|||Catalyzes the ATP-dependent phosphorylation of N-acetyl-L-glutamate.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS08865 ^@ http://purl.uniprot.org/uniprot/C1CWC8 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS04435 ^@ http://purl.uniprot.org/uniprot/C1D1A4 ^@ Similarity ^@ Belongs to the glycosyl hydrolase 13 family. http://togogenome.org/gene/546414:DEIDE_RS13260 ^@ http://purl.uniprot.org/uniprot/C1D087 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the acetokinase family.|||Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction.|||Cytoplasm|||Homodimer.|||Mg(2+). Can also accept Mn(2+). http://togogenome.org/gene/546414:DEIDE_RS02570 ^@ http://purl.uniprot.org/uniprot/C1D029 ^@ Caution|||Cofactor|||Function|||Similarity ^@ Belongs to the thiamine-phosphate synthase family.|||Binds 1 Mg(2+) ion per subunit.|||Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP).|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS14665 ^@ http://purl.uniprot.org/uniprot/C1D2J8 ^@ Similarity ^@ Belongs to the peptidase M20A family. http://togogenome.org/gene/546414:DEIDE_RS12800 ^@ http://purl.uniprot.org/uniprot/C1CZM0 ^@ Function|||Similarity ^@ Belongs to the pseudouridine synthase RluA family.|||Responsible for synthesis of pseudouridine from uracil. http://togogenome.org/gene/546414:DEIDE_RS00765 ^@ http://purl.uniprot.org/uniprot/C1CYB8 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bL32 family. http://togogenome.org/gene/546414:DEIDE_RS02350 ^@ http://purl.uniprot.org/uniprot/C1CZY8 ^@ Function|||Similarity|||Subunit ^@ Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln).|||Belongs to the GatB/GatE family. GatB subfamily.|||Heterotrimer of A, B and C subunits. http://togogenome.org/gene/546414:DEIDE_RS00515 ^@ http://purl.uniprot.org/uniprot/C1CXT8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the V-ATPase 116 kDa subunit family.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS16370 ^@ http://purl.uniprot.org/uniprot/C1D490 ^@ Similarity ^@ Belongs to the UPF0065 (bug) family. http://togogenome.org/gene/546414:DEIDE_RS03015 ^@ http://purl.uniprot.org/uniprot/C1D0J1 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the ferrochelatase family.|||Catalyzes the ferrous insertion into protoporphyrin IX.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS11800 ^@ http://purl.uniprot.org/uniprot/C1CYP0 ^@ Cofactor|||Miscellaneous|||Similarity ^@ Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.|||Binds 1 FAD per subunit.|||The active site is a redox-active disulfide bond. http://togogenome.org/gene/546414:DEIDE_RS05005 ^@ http://purl.uniprot.org/uniprot/C1D1L7 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the MraZ family.|||Forms oligomers.|||nucleoid http://togogenome.org/gene/546414:DEIDE_RS07090 ^@ http://purl.uniprot.org/uniprot/C1CVC7 ^@ Function|||Similarity ^@ Belongs to the NAD-dependent DNA ligase family. LigA subfamily.|||DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. http://togogenome.org/gene/546414:DEIDE_RS10940 ^@ http://purl.uniprot.org/uniprot/C1CXI2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/546414:DEIDE_RS17190 ^@ http://purl.uniprot.org/uniprot/C1D3Q6 ^@ Similarity ^@ Belongs to the sigma-70 factor family. ECF subfamily. http://togogenome.org/gene/546414:DEIDE_RS08810 ^@ http://purl.uniprot.org/uniprot/C1CWB6 ^@ Similarity ^@ Belongs to the arginase family. http://togogenome.org/gene/546414:DEIDE_RS12825 ^@ http://purl.uniprot.org/uniprot/C1CZM5 ^@ Similarity ^@ Belongs to the peptidase U62 family. http://togogenome.org/gene/546414:DEIDE_RS08685 ^@ http://purl.uniprot.org/uniprot/C1CW94 ^@ Similarity ^@ Belongs to the FtsK/SpoIIIE/SftA family. http://togogenome.org/gene/546414:DEIDE_RS06840 ^@ http://purl.uniprot.org/uniprot/C1CV78 ^@ Similarity ^@ Belongs to the UDP-N-acetylglucosamine 2-epimerase family. http://togogenome.org/gene/546414:DEIDE_RS14880 ^@ http://purl.uniprot.org/uniprot/C1D2N9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the MIP/aquaporin (TC 1.A.8) family.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS09665 ^@ http://purl.uniprot.org/uniprot/C1CWT6 ^@ Function|||Similarity|||Subunit ^@ Belongs to the acetolactate synthase small subunit family.|||Catalyzes the conversion of 2 pyruvate molecules into acetolactate in the first common step of the biosynthetic pathway of the branched-amino acids such as leucine, isoleucine, and valine.|||Dimer of large and small chains. http://togogenome.org/gene/546414:DEIDE_RS11950 ^@ http://purl.uniprot.org/uniprot/C1CYR5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the PEP-utilizing enzyme family.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS02970 ^@ http://purl.uniprot.org/uniprot/C1D0I2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS07085 ^@ http://purl.uniprot.org/uniprot/C1CVC6 ^@ Similarity ^@ Belongs to the asp23 family. http://togogenome.org/gene/546414:DEIDE_RS06155 ^@ http://purl.uniprot.org/uniprot/C1CUV1 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the endoribonuclease YbeY family.|||Binds 1 zinc ion.|||Cytoplasm|||Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. http://togogenome.org/gene/546414:DEIDE_RS07835 ^@ http://purl.uniprot.org/uniprot/C1CVS4 ^@ Similarity ^@ Belongs to the P(II) protein family. http://togogenome.org/gene/546414:DEIDE_RS02960 ^@ http://purl.uniprot.org/uniprot/C1D0I0 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the complex I subunit 6 family.|||Cell membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/546414:DEIDE_RS01885 ^@ http://purl.uniprot.org/uniprot/C1CZB7 ^@ Similarity ^@ Belongs to the UPF0051 (ycf24) family. http://togogenome.org/gene/546414:DEIDE_RS04345 ^@ http://purl.uniprot.org/uniprot/C1D184 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the Lgt family.|||Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins.|||Cell membrane http://togogenome.org/gene/546414:DEIDE_RS09240 ^@ http://purl.uniprot.org/uniprot/C1CWK0 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the AB hydrolase superfamily. MetX family.|||Cytoplasm|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine. http://togogenome.org/gene/546414:DEIDE_RS03490 ^@ http://purl.uniprot.org/uniprot/C1D0S3 ^@ Function|||Similarity|||Subunit ^@ Belongs to the bacterial ribosomal protein bL12 family.|||Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation.|||Homodimer. Part of the ribosomal stalk of the 50S ribosomal subunit. Forms a multimeric L10(L12)X complex, where L10 forms an elongated spine to which 2 to 4 L12 dimers bind in a sequential fashion. Binds GTP-bound translation factors. http://togogenome.org/gene/546414:DEIDE_RS09880 ^@ http://purl.uniprot.org/uniprot/C1CWX4 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the SecA family.|||Cell membrane|||Cytoplasm|||Monomer and homodimer. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF. Other proteins may also be involved.|||Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. http://togogenome.org/gene/546414:DEIDE_RS09230 ^@ http://purl.uniprot.org/uniprot/C1CWJ8 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family.|||Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS02515 ^@ http://purl.uniprot.org/uniprot/C1D020 ^@ Similarity ^@ Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. http://togogenome.org/gene/546414:DEIDE_RS03115 ^@ http://purl.uniprot.org/uniprot/C1D0K9 ^@ Similarity ^@ Belongs to the bacterial solute-binding protein 3 family. http://togogenome.org/gene/546414:DEIDE_RS07860 ^@ http://purl.uniprot.org/uniprot/C1CVS9 ^@ Function|||Similarity ^@ Belongs to the NadC/ModD family.|||Involved in the catabolism of quinolinic acid (QA). http://togogenome.org/gene/546414:DEIDE_RS03330 ^@ http://purl.uniprot.org/uniprot/C1D0P5 ^@ Cofactor|||Similarity|||Subunit ^@ Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family.|||Binds 1 FAD per subunit.|||Homodimer. http://togogenome.org/gene/546414:DEIDE_RS08950 ^@ http://purl.uniprot.org/uniprot/C1CWE6 ^@ Function|||Similarity|||Subunit ^@ Belongs to the haloalkane dehalogenase family. Type 2 subfamily.|||Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons.|||Monomer. http://togogenome.org/gene/546414:DEIDE_RS11600 ^@ http://purl.uniprot.org/uniprot/C1CY73 ^@ Function|||Similarity ^@ Belongs to the LDH/MDH superfamily. MDH type 2 family.|||Catalyzes the reversible oxidation of malate to oxaloacetate. http://togogenome.org/gene/546414:DEIDE_RS12170 ^@ http://purl.uniprot.org/uniprot/C1CYV9 ^@ Caution|||Domain|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the MobA family.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||The N-terminal domain determines nucleotide recognition and specific binding, while the C-terminal domain determines the specific binding to the target protein.|||Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor. http://togogenome.org/gene/546414:DEIDE_RS08580 ^@ http://purl.uniprot.org/uniprot/C1CW72 ^@ Similarity ^@ Belongs to the 3-oxoacid CoA-transferase subunit B family. http://togogenome.org/gene/546414:DEIDE_RS06065 ^@ http://purl.uniprot.org/uniprot/C1CUT3 ^@ Similarity ^@ Belongs to the acyl-CoA dehydrogenase family. http://togogenome.org/gene/546414:DEIDE_RS08145 ^@ http://purl.uniprot.org/uniprot/C1CVY6 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS06015 ^@ http://purl.uniprot.org/uniprot/C1CUS4 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. RsmA subfamily.|||Cytoplasm|||Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. http://togogenome.org/gene/546414:DEIDE_RS10710 ^@ http://purl.uniprot.org/uniprot/C1CXD7 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS13 family.|||Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites.|||Part of the 30S ribosomal subunit. Forms a loose heterodimer with protein S19. Forms two bridges to the 50S subunit in the 70S ribosome. http://togogenome.org/gene/546414:DEIDE_RS11765 ^@ http://purl.uniprot.org/uniprot/C1CYN3 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS04130 ^@ http://purl.uniprot.org/uniprot/C1D143 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-I aminoacyl-tRNA synthetase family.|||Catalyzes the attachment of tryptophan to tRNA(Trp).|||Cytoplasm|||Homodimer. http://togogenome.org/gene/546414:DEIDE_RS02460 ^@ http://purl.uniprot.org/uniprot/C1D010 ^@ Function|||Similarity|||Subunit ^@ Belongs to the serine/threonine dehydratase family.|||Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.|||Homotetramer. http://togogenome.org/gene/546414:DEIDE_RS17750 ^@ http://purl.uniprot.org/uniprot/C1D408 ^@ Similarity ^@ Belongs to the bacterial solute-binding protein 9 family. http://togogenome.org/gene/546414:DEIDE_RS04210 ^@ http://purl.uniprot.org/uniprot/C1D158 ^@ Function|||Similarity ^@ Belongs to the bacterial ribosomal protein bL19 family.|||This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. http://togogenome.org/gene/546414:DEIDE_RS13400 ^@ http://purl.uniprot.org/uniprot/C1D0B4 ^@ Similarity ^@ Belongs to the 2-oxoacid dehydrogenase family. http://togogenome.org/gene/546414:DEIDE_RS00305 ^@ http://purl.uniprot.org/uniprot/C1CXP8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/546414:DEIDE_RS12255 ^@ http://purl.uniprot.org/uniprot/C1CYX6 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the FGAMS family.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer. Part of the FGAM synthase complex composed of 1 PurL, 1 PurQ and 2 PurS subunits.|||Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL. http://togogenome.org/gene/546414:DEIDE_RS08115 ^@ http://purl.uniprot.org/uniprot/C1CVY0 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the transcriptional regulatory Rex family.|||Cytoplasm|||Homodimer.|||Modulates transcription in response to changes in cellular NADH/NAD(+) redox state. http://togogenome.org/gene/546414:DEIDE_RS07865 ^@ http://purl.uniprot.org/uniprot/C1CVT0 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the quinolinate synthase family. Type 2 subfamily.|||Binds 1 [4Fe-4S] cluster per subunit.|||Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS11785 ^@ http://purl.uniprot.org/uniprot/C1CYN7 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.|||Cell membrane|||Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate across the membrane. http://togogenome.org/gene/546414:DEIDE_RS07160 ^@ http://purl.uniprot.org/uniprot/C1CVE0 ^@ Function|||Similarity|||Subunit ^@ Belongs to the LeuD family. LeuD type 2 subfamily.|||Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate.|||Heterodimer of LeuC and LeuD. http://togogenome.org/gene/546414:DEIDE_RS04180 ^@ http://purl.uniprot.org/uniprot/C1D152 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ABC-3 integral membrane protein family.|||Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS16600 ^@ http://purl.uniprot.org/uniprot/C1D3E4 ^@ Similarity ^@ Belongs to the peptidase S8 family. http://togogenome.org/gene/546414:DEIDE_RS05460 ^@ http://purl.uniprot.org/uniprot/C1CUG2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS05705 ^@ http://purl.uniprot.org/uniprot/C1CUL0 ^@ Function|||Similarity ^@ Belongs to the helicase family. RecG subfamily.|||Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA). http://togogenome.org/gene/546414:DEIDE_RS15650 ^@ http://purl.uniprot.org/uniprot/C1D341 ^@ Function|||Similarity ^@ Belongs to the CbiD family.|||Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. http://togogenome.org/gene/546414:DEIDE_RS00770 ^@ http://purl.uniprot.org/uniprot/C1CYB9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the UPF0126 family.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS10845 ^@ http://purl.uniprot.org/uniprot/C1CXG4 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL23 family.|||One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome.|||Part of the 50S ribosomal subunit. Contacts protein L29, and trigger factor when it is bound to the ribosome. http://togogenome.org/gene/546414:DEIDE_RS04295 ^@ http://purl.uniprot.org/uniprot/C1D174 ^@ Function|||Similarity|||Subunit ^@ Belongs to the type IA topoisomerase family.|||Monomer.|||Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone. http://togogenome.org/gene/546414:DEIDE_RS11235 ^@ http://purl.uniprot.org/uniprot/C1CY03 ^@ Function|||Similarity|||Subunit ^@ ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.|||Belongs to the ClpX chaperone family.|||Component of the ClpX-ClpP complex. Forms a hexameric ring that, in the presence of ATP, binds to fourteen ClpP subunits assembled into a disk-like structure with a central cavity, resembling the structure of eukaryotic proteasomes. http://togogenome.org/gene/546414:DEIDE_RS08695 ^@ http://purl.uniprot.org/uniprot/C1CW96 ^@ Similarity ^@ Belongs to the metallophosphoesterase superfamily. YfcE family. http://togogenome.org/gene/546414:DEIDE_RS07345 ^@ http://purl.uniprot.org/uniprot/C1CVH6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the DsbB family. BdbC subfamily.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS13655 ^@ http://purl.uniprot.org/uniprot/C1D1Z2 ^@ Similarity ^@ Belongs to the proline racemase family. http://togogenome.org/gene/546414:DEIDE_RS01410 ^@ http://purl.uniprot.org/uniprot/C1CZ27 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.|||Cell membrane http://togogenome.org/gene/546414:DEIDE_RS06035 ^@ http://purl.uniprot.org/uniprot/C1CUS8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the glycosyltransferase 28 family.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS02105 ^@ http://purl.uniprot.org/uniprot/C1CZT9 ^@ Function|||Similarity ^@ Belongs to the FGGY kinase family.|||Catalyzes the phosphorylation of D-xylulose to D-xylulose 5-phosphate. http://togogenome.org/gene/546414:DEIDE_RS04100 ^@ http://purl.uniprot.org/uniprot/C1D137 ^@ Similarity ^@ Belongs to the PHP hydrolase family. HisK subfamily. http://togogenome.org/gene/546414:DEIDE_RS03395 ^@ http://purl.uniprot.org/uniprot/C1D0Q4 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 3 subfamily.|||Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).|||Consists of three domains: the N-terminal catalytic domain, the anticodon-binding domain and the C-terminal extension.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/546414:DEIDE_RS04330 ^@ http://purl.uniprot.org/uniprot/C1D181 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS09405 ^@ http://purl.uniprot.org/uniprot/C1CWN3 ^@ Similarity ^@ Belongs to the methylmalonyl-CoA epimerase family. http://togogenome.org/gene/546414:DEIDE_RS06890 ^@ http://purl.uniprot.org/uniprot/C1CV88 ^@ Function|||Similarity ^@ Belongs to the cytidine and deoxycytidylate deaminase family.|||This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis. http://togogenome.org/gene/546414:DEIDE_RS09475 ^@ http://purl.uniprot.org/uniprot/C1CWP8 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the radical SAM superfamily. MqnC family.|||Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.|||Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2). http://togogenome.org/gene/546414:DEIDE_RS12480 ^@ http://purl.uniprot.org/uniprot/C1CZF5 ^@ Similarity ^@ Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. http://togogenome.org/gene/546414:DEIDE_RS10165 ^@ http://purl.uniprot.org/uniprot/C1CX26 ^@ Similarity ^@ Belongs to the dGTPase family. Type 2 subfamily. http://togogenome.org/gene/546414:DEIDE_RS03565 ^@ http://purl.uniprot.org/uniprot/C1D0T5 ^@ Similarity ^@ Belongs to the citrate synthase family. http://togogenome.org/gene/546414:DEIDE_RS11025 ^@ http://purl.uniprot.org/uniprot/C1CXW0 ^@ Similarity ^@ Belongs to the peptidase S33 family. http://togogenome.org/gene/546414:DEIDE_RS00355 ^@ http://purl.uniprot.org/uniprot/C1CXQ8 ^@ Similarity ^@ Belongs to the sigma-70 factor family. ECF subfamily. http://togogenome.org/gene/546414:DEIDE_RS12035 ^@ http://purl.uniprot.org/uniprot/C1CYT3 ^@ Cofactor|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.|||Binds 2 magnesium ions per tetramer.|||Cytoplasm|||Tetramer of two alpha and two beta subunits. http://togogenome.org/gene/546414:DEIDE_RS16315 ^@ http://purl.uniprot.org/uniprot/C1D479 ^@ Similarity ^@ Belongs to the glycosyl hydrolase 38 family. http://togogenome.org/gene/546414:DEIDE_RS05365 ^@ http://purl.uniprot.org/uniprot/C1D1T7 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the IPP isomerase type 2 family.|||Cytoplasm|||Homooctamer. Dimer of tetramers.|||Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS05655 ^@ http://purl.uniprot.org/uniprot/C1CUK0 ^@ Similarity ^@ Belongs to the Skp family. http://togogenome.org/gene/546414:DEIDE_RS00580 ^@ http://purl.uniprot.org/uniprot/C1CXV1 ^@ Similarity|||Subunit ^@ Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family.|||Homodimer. http://togogenome.org/gene/546414:DEIDE_RS18410 ^@ http://purl.uniprot.org/uniprot/C1CVG3 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS02840 ^@ http://purl.uniprot.org/uniprot/C1D0F6 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the GcvH family.|||Binds 1 lipoyl cofactor covalently.|||The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.|||The glycine cleavage system is composed of four proteins: P, T, L and H. http://togogenome.org/gene/546414:DEIDE_RS01000 ^@ http://purl.uniprot.org/uniprot/C1CYG1 ^@ Similarity ^@ Belongs to the CutA family. http://togogenome.org/gene/546414:DEIDE_RS01890 ^@ http://purl.uniprot.org/uniprot/C1CZB8 ^@ Similarity ^@ Belongs to the UPF0051 (ycf24) family. http://togogenome.org/gene/546414:DEIDE_RS08360 ^@ http://purl.uniprot.org/uniprot/C1CW28 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS15965 ^@ http://purl.uniprot.org/uniprot/C1D3A4 ^@ Similarity ^@ Belongs to the peptidase S8 family. http://togogenome.org/gene/546414:DEIDE_RS11735 ^@ http://purl.uniprot.org/uniprot/C1CYM7 ^@ Similarity ^@ Belongs to the acyl coenzyme A hydrolase family. http://togogenome.org/gene/546414:DEIDE_RS03340 ^@ http://purl.uniprot.org/uniprot/C1D0P7 ^@ Similarity ^@ Belongs to the FKBP-type PPIase family. http://togogenome.org/gene/546414:DEIDE_RS14810 ^@ http://purl.uniprot.org/uniprot/C1D2M5 ^@ Similarity ^@ Belongs to the CdaR family. http://togogenome.org/gene/546414:DEIDE_RS01870 ^@ http://purl.uniprot.org/uniprot/C1CZB4 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the elongation factor P family.|||Cytoplasm|||Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. http://togogenome.org/gene/546414:DEIDE_RS00050 ^@ http://purl.uniprot.org/uniprot/C1CXJ9 ^@ Function|||Similarity ^@ Belongs to the bacterial ribosomal protein bL9 family.|||Binds to the 23S rRNA. http://togogenome.org/gene/546414:DEIDE_RS17440 ^@ http://purl.uniprot.org/uniprot/C1D3V2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS04150 ^@ http://purl.uniprot.org/uniprot/C1D146 ^@ Similarity ^@ Belongs to the RecJ family. http://togogenome.org/gene/546414:DEIDE_RS09790 ^@ http://purl.uniprot.org/uniprot/C1CWV7 ^@ Similarity ^@ Belongs to the OMP decarboxylase family. Type 2 subfamily. http://togogenome.org/gene/546414:DEIDE_RS13485 ^@ http://purl.uniprot.org/uniprot/C1D1W0 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.|||Cell inner membrane|||Cell membrane|||Membrane|||Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons. http://togogenome.org/gene/546414:DEIDE_RS10135 ^@ http://purl.uniprot.org/uniprot/C1CX21 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the bacterial secretin family.|||Cell outer membrane http://togogenome.org/gene/546414:DEIDE_RS11345 ^@ http://purl.uniprot.org/uniprot/C1CY25 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the AdoMet synthase family.|||Binds 1 potassium ion per subunit.|||Binds 2 divalent ions per subunit.|||Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.|||Cytoplasm|||Homotetramer; dimer of dimers. http://togogenome.org/gene/546414:DEIDE_RS07405 ^@ http://purl.uniprot.org/uniprot/C1CVI8 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the MnmA/TRMU family.|||Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS09335 ^@ http://purl.uniprot.org/uniprot/C1CWL9 ^@ Function|||Similarity|||Subunit ^@ Belongs to the SbcD family.|||Heterodimer of SbcC and SbcD.|||SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity. http://togogenome.org/gene/546414:DEIDE_RS05995 ^@ http://purl.uniprot.org/uniprot/C1CUS0 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PlsY family.|||Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.|||Cell membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Probably interacts with PlsX. http://togogenome.org/gene/546414:DEIDE_RS06885 ^@ http://purl.uniprot.org/uniprot/C1CV87 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS11170 ^@ http://purl.uniprot.org/uniprot/C1CXZ0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the BioY family.|||Cell membrane http://togogenome.org/gene/546414:DEIDE_RS04350 ^@ http://purl.uniprot.org/uniprot/C1D185 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TatC family.|||Cell membrane|||Forms a complex with TatA.|||Membrane|||Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. http://togogenome.org/gene/546414:DEIDE_RS04450 ^@ http://purl.uniprot.org/uniprot/C1D1A7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS13165 ^@ http://purl.uniprot.org/uniprot/C1D070 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the thymidylate synthase family. Bacterial-type ThyA subfamily.|||Catalyzes the reductive methylation of 2'-deoxyuridine-5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/546414:DEIDE_RS04280 ^@ http://purl.uniprot.org/uniprot/C1D171 ^@ Similarity ^@ Belongs to the phosphohexose mutase family. http://togogenome.org/gene/546414:DEIDE_RS15975 ^@ http://purl.uniprot.org/uniprot/C1D3A6 ^@ Similarity ^@ Belongs to the galactose-1-phosphate uridylyltransferase type 1 family. http://togogenome.org/gene/546414:DEIDE_RS07135 ^@ http://purl.uniprot.org/uniprot/C1CVD5 ^@ Function|||Similarity ^@ Belongs to the bacterial ribosomal protein bS20 family.|||Binds directly to 16S ribosomal RNA. http://togogenome.org/gene/546414:DEIDE_RS11265 ^@ http://purl.uniprot.org/uniprot/C1CY09 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily. http://togogenome.org/gene/546414:DEIDE_RS02885 ^@ http://purl.uniprot.org/uniprot/C1D0G5 ^@ Cofactor|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-II aminoacyl-tRNA synthetase family.|||Binds 3 Mg(2+) ions per subunit.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/546414:DEIDE_RS05420 ^@ http://purl.uniprot.org/uniprot/C1D1U7 ^@ Caution|||Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the transketolase family. DXPS subfamily.|||Binds 1 Mg(2+) ion per subunit.|||Binds 1 thiamine pyrophosphate per subunit.|||Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP).|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS11055 ^@ http://purl.uniprot.org/uniprot/C1CXW8 ^@ Cofactor|||Domain|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the class-II aminoacyl-tRNA synthetase family.|||Binds 1 zinc ion per subunit.|||Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.|||Consists of three domains; the N-terminal catalytic domain, the editing domain and the C-terminal C-Ala domain. The editing domain removes incorrectly charged amino acids, while the C-Ala domain, along with tRNA(Ala), serves as a bridge to cooperatively bring together the editing and aminoacylation centers thus stimulating deacylation of misacylated tRNAs.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS19805 ^@ http://purl.uniprot.org/uniprot/C1D2Z9 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS01765 ^@ http://purl.uniprot.org/uniprot/C1CZ93 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) family.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS08445 ^@ http://purl.uniprot.org/uniprot/C1CW45 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the FtsZ family.|||Cytoplasm|||Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.|||Homodimer. Polymerizes to form a dynamic ring structure in a strictly GTP-dependent manner. Interacts directly with several other division proteins. http://togogenome.org/gene/546414:DEIDE_RS06585 ^@ http://purl.uniprot.org/uniprot/C1CV29 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the phosphoglycerate kinase family.|||Cytoplasm|||Monomer. http://togogenome.org/gene/546414:DEIDE_RS03525 ^@ http://purl.uniprot.org/uniprot/C1CXG8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.|||Cytoplasm|||Monomer.|||This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis. http://togogenome.org/gene/546414:DEIDE_RS14785 ^@ http://purl.uniprot.org/uniprot/C1D2M0 ^@ Similarity ^@ Belongs to the extradiol ring-cleavage dioxygenase family. http://togogenome.org/gene/546414:DEIDE_RS11035 ^@ http://purl.uniprot.org/uniprot/C1CXW3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the TACO1 family.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS15660 ^@ http://purl.uniprot.org/uniprot/C1D343 ^@ Similarity ^@ Belongs to the precorrin methyltransferase family. http://togogenome.org/gene/546414:DEIDE_RS00045 ^@ http://purl.uniprot.org/uniprot/C1CXJ8 ^@ Function|||Similarity ^@ Belongs to the RNase Y family.|||Endoribonuclease that initiates mRNA decay. http://togogenome.org/gene/546414:DEIDE_RS16005 ^@ http://purl.uniprot.org/uniprot/C1D3B1 ^@ Similarity ^@ Belongs to the peptidase S51 family. http://togogenome.org/gene/546414:DEIDE_RS11795 ^@ http://purl.uniprot.org/uniprot/C1CYN9 ^@ Subcellular Location Annotation ^@ Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS08830 ^@ http://purl.uniprot.org/uniprot/C1CWB9 ^@ Similarity ^@ Belongs to the iron-sulfur dependent L-serine dehydratase family. http://togogenome.org/gene/546414:DEIDE_RS16695 ^@ http://purl.uniprot.org/uniprot/C1D3G0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/546414:DEIDE_RS01675 ^@ http://purl.uniprot.org/uniprot/C1CZ76 ^@ Cofactor|||Similarity ^@ Belongs to the arginase family.|||Binds 2 manganese ions per subunit. http://togogenome.org/gene/546414:DEIDE_RS03505 ^@ http://purl.uniprot.org/uniprot/C1D0S6 ^@ Function|||PTM|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL11 family.|||Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.|||One or more lysine residues are methylated.|||Part of the ribosomal stalk of the 50S ribosomal subunit. Interacts with L10 and the large rRNA to form the base of the stalk. L10 forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex. http://togogenome.org/gene/546414:DEIDE_RS12835 ^@ http://purl.uniprot.org/uniprot/C1CZM7 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the radical SAM superfamily. MqnE family.|||Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.|||Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate. http://togogenome.org/gene/546414:DEIDE_RS14945 ^@ http://purl.uniprot.org/uniprot/C1D2Q2 ^@ Function|||Similarity ^@ Belongs to the dTDP-4-dehydrorhamnose reductase family.|||Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. http://togogenome.org/gene/546414:DEIDE_RS01430 ^@ http://purl.uniprot.org/uniprot/C1CZ31 ^@ Similarity ^@ Belongs to the peptidase M29 family. http://togogenome.org/gene/546414:DEIDE_RS19745 ^@ http://purl.uniprot.org/uniprot/C1CV62 ^@ Function|||Similarity ^@ Belongs to the RlpA family.|||Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. http://togogenome.org/gene/546414:DEIDE_RS00620 ^@ http://purl.uniprot.org/uniprot/C1CY94 ^@ Similarity ^@ Belongs to the class-I aminoacyl-tRNA synthetase family. http://togogenome.org/gene/546414:DEIDE_RS02740 ^@ http://purl.uniprot.org/uniprot/C1D0D7 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS00595 ^@ http://purl.uniprot.org/uniprot/C1CY89 ^@ Similarity ^@ Belongs to the DinB family. http://togogenome.org/gene/546414:DEIDE_RS10140 ^@ http://purl.uniprot.org/uniprot/C1CX22 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the chorismate synthase family.|||Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.|||Homotetramer.|||Reduced FMN (FMNH(2)). http://togogenome.org/gene/546414:DEIDE_RS08420 ^@ http://purl.uniprot.org/uniprot/C1CW40 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the glycosyltransferase 28 family. MurG subfamily.|||Cell membrane|||Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc-(pentapeptide)GlcNAc (lipid intermediate II). http://togogenome.org/gene/546414:DEIDE_RS08765 ^@ http://purl.uniprot.org/uniprot/C1CWA7 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. http://togogenome.org/gene/546414:DEIDE_RS10865 ^@ http://purl.uniprot.org/uniprot/C1CXG8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.|||Cytoplasm|||Monomer.|||This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis. http://togogenome.org/gene/546414:DEIDE_RS12355 ^@ http://purl.uniprot.org/uniprot/C1CZD0 ^@ Function|||Subcellular Location Annotation|||Subunit ^@ Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/546414:DEIDE_RS10665 ^@ http://purl.uniprot.org/uniprot/C1CXC8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PlsX family.|||Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.|||Cytoplasm|||Homodimer. Probably interacts with PlsY. http://togogenome.org/gene/546414:DEIDE_RS13965 ^@ http://purl.uniprot.org/uniprot/C1D250 ^@ Similarity ^@ Belongs to the intradiol ring-cleavage dioxygenase family. http://togogenome.org/gene/546414:DEIDE_RS00715 ^@ http://purl.uniprot.org/uniprot/C1CYB0 ^@ Function|||Similarity ^@ Belongs to the threonine synthase family.|||Catalyzes the gamma-elimination of phosphate from L-phosphohomoserine and the beta-addition of water to produce L-threonine. http://togogenome.org/gene/546414:DEIDE_RS10385 ^@ http://purl.uniprot.org/uniprot/C1CX72 ^@ Similarity ^@ Belongs to the AlaDH/PNT family. http://togogenome.org/gene/546414:DEIDE_RS02835 ^@ http://purl.uniprot.org/uniprot/C1D0F5 ^@ Function|||Similarity|||Subunit ^@ Belongs to the GcvP family.|||The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.|||The glycine cleavage system is composed of four proteins: P, T, L and H. http://togogenome.org/gene/546414:DEIDE_RS09630 ^@ http://purl.uniprot.org/uniprot/C1CWS9 ^@ Similarity ^@ Belongs to the histone deacetylase family. http://togogenome.org/gene/546414:DEIDE_RS12200 ^@ http://purl.uniprot.org/uniprot/C1CYW5 ^@ Similarity ^@ Belongs to the metallo-beta-lactamase superfamily. Class-B beta-lactamase family. http://togogenome.org/gene/546414:DEIDE_RS06345 ^@ http://purl.uniprot.org/uniprot/C1CUY8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS01020 ^@ http://purl.uniprot.org/uniprot/C1CYG5 ^@ Similarity ^@ Belongs to the peptidase S8 family. http://togogenome.org/gene/546414:DEIDE_RS07915 ^@ http://purl.uniprot.org/uniprot/C1CVU0 ^@ Similarity ^@ Belongs to the aldehyde dehydrogenase family. http://togogenome.org/gene/546414:DEIDE_RS09460 ^@ http://purl.uniprot.org/uniprot/C1CWP5 ^@ Cofactor|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-I aminoacyl-tRNA synthetase family.|||Binds 1 zinc ion per subunit.|||Cytoplasm|||Monomer. http://togogenome.org/gene/546414:DEIDE_RS06500 ^@ http://purl.uniprot.org/uniprot/C1CV13 ^@ Similarity ^@ Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. http://togogenome.org/gene/546414:DEIDE_RS12695 ^@ http://purl.uniprot.org/uniprot/C1CZJ9 ^@ Function|||Similarity|||Subunit ^@ Belongs to the bacterial ribosomal protein bL21 family.|||Part of the 50S ribosomal subunit. Contacts protein L20.|||This protein binds to 23S rRNA in the presence of protein L20. http://togogenome.org/gene/546414:DEIDE_RS04655 ^@ http://purl.uniprot.org/uniprot/C1D1E8 ^@ Function|||PTM|||Similarity ^@ Belongs to the NAPRTase family.|||Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate.|||Transiently phosphorylated on a His residue during the reaction cycle. Phosphorylation strongly increases the affinity for substrates and increases the rate of nicotinate D-ribonucleotide production. Dephosphorylation regenerates the low-affinity form of the enzyme, leading to product release. http://togogenome.org/gene/546414:DEIDE_RS13420 ^@ http://purl.uniprot.org/uniprot/C1D0B8 ^@ Similarity ^@ Belongs to the DprA/Smf family. http://togogenome.org/gene/546414:DEIDE_RS02085 ^@ http://purl.uniprot.org/uniprot/C1CZT5 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS03270 ^@ http://purl.uniprot.org/uniprot/C1D0N4 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the thiolase-like superfamily. FabH family.|||Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids.|||Cytoplasm|||Homodimer.|||The last Arg residue of the ACP-binding site is essential for the weak association between ACP/AcpP and FabH. http://togogenome.org/gene/546414:DEIDE_RS01445 ^@ http://purl.uniprot.org/uniprot/C1CZ34 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS08460 ^@ http://purl.uniprot.org/uniprot/C1CW48 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the methyltransferase superfamily. RsmI family.|||Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS16085 ^@ http://purl.uniprot.org/uniprot/C1D434 ^@ Activity Regulation|||Caution|||Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Activated by a monovalent cation that binds near, but not in, the active site. The most likely occupant of the site in vivo is potassium. Ion binding induces a conformational change that may alter substrate affinity.|||Belongs to the carbohydrate kinase PfkB family. Ribokinase subfamily.|||Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.|||Cytoplasm|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Requires a divalent cation, most likely magnesium in vivo, as an electrophilic catalyst to aid phosphoryl group transfer. It is the chelate of the metal and the nucleotide that is the actual substrate. http://togogenome.org/gene/546414:DEIDE_RS13920 ^@ http://purl.uniprot.org/uniprot/C1D244 ^@ Similarity ^@ To bacterial alkanal monooxygenase alpha and beta chains. http://togogenome.org/gene/546414:DEIDE_RS05290 ^@ http://purl.uniprot.org/uniprot/C1D1S3 ^@ Similarity ^@ Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. http://togogenome.org/gene/546414:DEIDE_RS10365 ^@ http://purl.uniprot.org/uniprot/C1CX68 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS00250 ^@ http://purl.uniprot.org/uniprot/C1CXN8 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS05490 ^@ http://purl.uniprot.org/uniprot/C1CUG8 ^@ Similarity ^@ Belongs to the histone deacetylase family. http://togogenome.org/gene/546414:DEIDE_RS00455 ^@ http://purl.uniprot.org/uniprot/C1CXS7 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the uracil-DNA glycosylase (UDG) superfamily. UNG family.|||Cytoplasm|||Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. http://togogenome.org/gene/546414:DEIDE_RS12995 ^@ http://purl.uniprot.org/uniprot/C1CZQ7 ^@ Similarity|||Subunit ^@ Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.|||Homodimer. http://togogenome.org/gene/546414:DEIDE_RS02955 ^@ http://purl.uniprot.org/uniprot/C1D0H9 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I 23 kDa subunit family.|||Binds 2 [4Fe-4S] clusters per subunit.|||Cell membrane|||NDH-1 is composed of 15 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/546414:DEIDE_RS08240 ^@ http://purl.uniprot.org/uniprot/C1CW04 ^@ Similarity ^@ Belongs to the FPP/GGPP synthase family. http://togogenome.org/gene/546414:DEIDE_RS14565 ^@ http://purl.uniprot.org/uniprot/C1D2H8 ^@ Similarity ^@ Belongs to the KHG/KDPG aldolase family. http://togogenome.org/gene/546414:DEIDE_RS03290 ^@ http://purl.uniprot.org/uniprot/C1D0N8 ^@ Function|||PTM|||Similarity|||Subcellular Location Annotation ^@ 4'-phosphopantetheine is transferred from CoA to a specific serine of apo-ACP by AcpS. This modification is essential for activity because fatty acids are bound in thioester linkage to the sulfhydryl of the prosthetic group.|||Belongs to the acyl carrier protein (ACP) family.|||Carrier of the growing fatty acid chain in fatty acid biosynthesis.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS05345 ^@ http://purl.uniprot.org/uniprot/C1D1T4 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS07510 ^@ http://purl.uniprot.org/uniprot/C1CVK9 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the GTP-binding SRP family. SRP54 subfamily.|||Composed of three domains: the N-terminal N domain, which is responsible for interactions with the ribosome, the central G domain, which binds GTP, and the C-terminal M domain, which binds the RNA and the signal sequence of the RNC.|||Cytoplasm|||Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY.|||Part of the signal recognition particle protein translocation system, which is composed of SRP and FtsY. http://togogenome.org/gene/546414:DEIDE_RS05860 ^@ http://purl.uniprot.org/uniprot/C1CUP2 ^@ Similarity ^@ Belongs to the glycosyl hydrolase 20 family. http://togogenome.org/gene/546414:DEIDE_RS02935 ^@ http://purl.uniprot.org/uniprot/C1D0H5 ^@ Cofactor|||Similarity ^@ Belongs to the complex I 24 kDa subunit family.|||Binds 1 [2Fe-2S] cluster. http://togogenome.org/gene/546414:DEIDE_RS14255 ^@ http://purl.uniprot.org/uniprot/C1D2B6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS14840 ^@ http://purl.uniprot.org/uniprot/C1D2N1 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS12550 ^@ http://purl.uniprot.org/uniprot/C1CZH1 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS02215 ^@ http://purl.uniprot.org/uniprot/C1CZW1 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the UPF0161 family.|||Cell membrane|||Could be involved in insertion of integral membrane proteins into the membrane. http://togogenome.org/gene/546414:DEIDE_RS10475 ^@ http://purl.uniprot.org/uniprot/C1CX90 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS06570 ^@ http://purl.uniprot.org/uniprot/C1CV26 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-II aminoacyl-tRNA synthetase family.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/546414:DEIDE_RS14405 ^@ http://purl.uniprot.org/uniprot/C1D2E6 ^@ Similarity ^@ Belongs to the UPF0065 (bug) family. http://togogenome.org/gene/546414:DEIDE_RS02040 ^@ http://purl.uniprot.org/uniprot/C1CZS6 ^@ Similarity ^@ Belongs to the thiolase-like superfamily. Thiolase family. http://togogenome.org/gene/546414:DEIDE_RS02845 ^@ http://purl.uniprot.org/uniprot/C1D0F7 ^@ Function|||Similarity|||Subunit ^@ Belongs to the GcvT family.|||The glycine cleavage system catalyzes the degradation of glycine.|||The glycine cleavage system is composed of four proteins: P, T, L and H. http://togogenome.org/gene/546414:DEIDE_RS12710 ^@ http://purl.uniprot.org/uniprot/C1CZK2 ^@ Function|||Similarity ^@ Belongs to the cyclophilin-type PPIase family.|||PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. http://togogenome.org/gene/546414:DEIDE_RS11690 ^@ http://purl.uniprot.org/uniprot/C1CYL8 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS05400 ^@ http://purl.uniprot.org/uniprot/C1D1U4 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the gluconeogenesis factor family.|||Cytoplasm|||Required for morphogenesis under gluconeogenic growth conditions. http://togogenome.org/gene/546414:DEIDE_RS10435 ^@ http://purl.uniprot.org/uniprot/C1CX82 ^@ Caution|||Cofactor|||Function|||Similarity ^@ Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.|||Binds 2 Zn(2+) ions per subunit.|||Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS00055 ^@ http://purl.uniprot.org/uniprot/C1CXK0 ^@ Function|||Similarity|||Subunit ^@ Belongs to the bacterial ribosomal protein bS18 family.|||Binds as a heterodimer with protein bS6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.|||Part of the 30S ribosomal subunit. Forms a tight heterodimer with protein bS6. http://togogenome.org/gene/546414:DEIDE_RS06510 ^@ http://purl.uniprot.org/uniprot/C1CV15 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS13355 ^@ http://purl.uniprot.org/uniprot/C1D0A5 ^@ Similarity ^@ Belongs to the ParB family. http://togogenome.org/gene/546414:DEIDE_RS06715 ^@ http://purl.uniprot.org/uniprot/C1CV54 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the transaldolase family. Type 3B subfamily.|||Cytoplasm|||Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. http://togogenome.org/gene/546414:DEIDE_RS11970 ^@ http://purl.uniprot.org/uniprot/C1CYR9 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS12790 ^@ http://purl.uniprot.org/uniprot/C1CZL8 ^@ Caution|||Function|||Similarity ^@ Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.|||Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS07685 ^@ http://purl.uniprot.org/uniprot/C1CVP3 ^@ Caution|||Function|||Similarity ^@ Belongs to the DXR family.|||Catalyzes the NADPH-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP).|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS05930 ^@ http://purl.uniprot.org/uniprot/C1CUQ6 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily.|||Catalyzes the NADPH-dependent reduction of [LysW]-aminoadipate 6-phosphate to yield [LysW]-aminoadipate 6-semialdehyde.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS05955 ^@ http://purl.uniprot.org/uniprot/C1CUR2 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the RimP family.|||Cytoplasm|||Required for maturation of 30S ribosomal subunits. http://togogenome.org/gene/546414:DEIDE_RS07635 ^@ http://purl.uniprot.org/uniprot/C1CVN3 ^@ Similarity ^@ Belongs to the barstar family. http://togogenome.org/gene/546414:DEIDE_RS04670 ^@ http://purl.uniprot.org/uniprot/C1D1F1 ^@ Similarity ^@ Belongs to the SIMIBI class G3E GTPase family. ArgK/MeaB subfamily. http://togogenome.org/gene/546414:DEIDE_RS02645 ^@ http://purl.uniprot.org/uniprot/C1D041 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. http://togogenome.org/gene/546414:DEIDE_RS12780 ^@ http://purl.uniprot.org/uniprot/C1CZL6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/546414:DEIDE_RS13470 ^@ http://purl.uniprot.org/uniprot/C1D1V7 ^@ Similarity ^@ Belongs to the DEAD box helicase family. http://togogenome.org/gene/546414:DEIDE_RS13210 ^@ http://purl.uniprot.org/uniprot/C1D079 ^@ Similarity ^@ Belongs to the glycosyl hydrolase 2 family. http://togogenome.org/gene/546414:DEIDE_RS06520 ^@ http://purl.uniprot.org/uniprot/C1CV16 ^@ Similarity ^@ Belongs to the small heat shock protein (HSP20) family. http://togogenome.org/gene/546414:DEIDE_RS07270 ^@ http://purl.uniprot.org/uniprot/C1CVG2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS05580 ^@ http://purl.uniprot.org/uniprot/C1CUI6 ^@ Similarity ^@ Belongs to the peptidase C40 family. http://togogenome.org/gene/546414:DEIDE_RS07455 ^@ http://purl.uniprot.org/uniprot/C1CVJ8 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS18960 ^@ http://purl.uniprot.org/uniprot/C1CZZ7 ^@ Subcellular Location Annotation ^@ Cell outer membrane|||Periplasm http://togogenome.org/gene/546414:DEIDE_RS08430 ^@ http://purl.uniprot.org/uniprot/C1CW42 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the MurB family.|||Cell wall formation.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS03610 ^@ http://purl.uniprot.org/uniprot/C1D0U3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the peptidase M50B family.|||Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS01470 ^@ http://purl.uniprot.org/uniprot/C1CZ39 ^@ Similarity ^@ Belongs to the UPF0047 family. http://togogenome.org/gene/546414:DEIDE_RS14355 ^@ http://purl.uniprot.org/uniprot/C1D2D6 ^@ Similarity ^@ Belongs to the intradiol ring-cleavage dioxygenase family. http://togogenome.org/gene/546414:DEIDE_RS12165 ^@ http://purl.uniprot.org/uniprot/C1CYV8 ^@ Similarity ^@ Belongs to the aldehyde dehydrogenase family. http://togogenome.org/gene/546414:DEIDE_RS17220 ^@ http://purl.uniprot.org/uniprot/C1D3R2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS06070 ^@ http://purl.uniprot.org/uniprot/C1CUT4 ^@ Caution|||Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the IlvD/Edd family.|||Binds 1 [2Fe-2S] cluster per subunit. This cluster acts as a Lewis acid cofactor.|||Functions in the biosynthesis of branched-chain amino acids. Catalyzes the dehydration of (2R,3R)-2,3-dihydroxy-3-methylpentanoate (2,3-dihydroxy-3-methylvalerate) into 2-oxo-3-methylpentanoate (2-oxo-3-methylvalerate) and of (2R)-2,3-dihydroxy-3-methylbutanoate (2,3-dihydroxyisovalerate) into 2-oxo-3-methylbutanoate (2-oxoisovalerate), the penultimate precursor to L-isoleucine and L-valine, respectively.|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS03520 ^@ http://purl.uniprot.org/uniprot/C1D0S9 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bL33 family. http://togogenome.org/gene/546414:DEIDE_RS13885 ^@ http://purl.uniprot.org/uniprot/C1D237 ^@ Similarity ^@ Belongs to the peptidase S8 family. http://togogenome.org/gene/546414:DEIDE_RS00130 ^@ http://purl.uniprot.org/uniprot/C1CXL6 ^@ Caution|||Function|||Similarity ^@ Belongs to the UbiX/PAD1 family.|||Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS16865 ^@ http://purl.uniprot.org/uniprot/C1D3J1 ^@ Subcellular Location Annotation ^@ Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS12595 ^@ http://purl.uniprot.org/uniprot/C1CZH9 ^@ Function|||Induction|||Similarity ^@ Acts as a chaperone.|||Belongs to the heat shock protein 70 family.|||By stress conditions e.g. heat shock. http://togogenome.org/gene/546414:DEIDE_RS06525 ^@ http://purl.uniprot.org/uniprot/C1CV17 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the IPP transferase family.|||Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A).|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer. http://togogenome.org/gene/546414:DEIDE_RS05275 ^@ http://purl.uniprot.org/uniprot/C1D1S0 ^@ Similarity ^@ Belongs to the peptidase S8 family. http://togogenome.org/gene/546414:DEIDE_RS08620 ^@ http://purl.uniprot.org/uniprot/C1CW81 ^@ Cofactor|||Similarity ^@ Belongs to the peptidase M3 family.|||Binds 1 zinc ion. http://togogenome.org/gene/546414:DEIDE_RS13155 ^@ http://purl.uniprot.org/uniprot/C1D068 ^@ Function|||Similarity ^@ Belongs to the dihydrofolate reductase family.|||Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis. http://togogenome.org/gene/546414:DEIDE_RS00180 ^@ http://purl.uniprot.org/uniprot/C1CXM4 ^@ Cofactor|||Similarity ^@ Belongs to the PTPS family. QueD subfamily.|||Binds 1 zinc ion per subunit. http://togogenome.org/gene/546414:DEIDE_RS11310 ^@ http://purl.uniprot.org/uniprot/C1CY18 ^@ Similarity ^@ Belongs to the LytR/CpsA/Psr (LCP) family. http://togogenome.org/gene/546414:DEIDE_RS11250 ^@ http://purl.uniprot.org/uniprot/C1CY06 ^@ Similarity ^@ Belongs to the GSP E family. http://togogenome.org/gene/546414:DEIDE_RS13710 ^@ http://purl.uniprot.org/uniprot/C1D204 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the RNase H family.|||Binds 1 Mg(2+) ion per subunit. May bind a second metal ion at a regulatory site, or after substrate binding.|||Cytoplasm|||Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.|||Monomer. http://togogenome.org/gene/546414:DEIDE_RS00110 ^@ http://purl.uniprot.org/uniprot/C1CXL2 ^@ Similarity ^@ Belongs to the bacterial histone-like protein family. http://togogenome.org/gene/546414:DEIDE_RS07830 ^@ http://purl.uniprot.org/uniprot/C1CVS3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ammonia transporter channel (TC 1.A.11.2) family.|||Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS12650 ^@ http://purl.uniprot.org/uniprot/C1CZJ0 ^@ Function|||Similarity|||Subunit ^@ Belongs to the RNase PH family.|||Homohexameric ring arranged as a trimer of dimers.|||Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. http://togogenome.org/gene/546414:DEIDE_RS00875 ^@ http://purl.uniprot.org/uniprot/C1CYD7 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the ArgR family.|||Cytoplasm|||Regulates arginine biosynthesis genes. http://togogenome.org/gene/546414:DEIDE_RS08980 ^@ http://purl.uniprot.org/uniprot/C1CWF1 ^@ Similarity ^@ Belongs to the pterin-4-alpha-carbinolamine dehydratase family. http://togogenome.org/gene/546414:DEIDE_RS17765 ^@ http://purl.uniprot.org/uniprot/C1D411 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ABC-3 integral membrane protein family.|||Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS02975 ^@ http://purl.uniprot.org/uniprot/C1D0I3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the complex I subunit 4 family.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS17245 ^@ http://purl.uniprot.org/uniprot/C1D3R6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/546414:DEIDE_RS11630 ^@ http://purl.uniprot.org/uniprot/C1CY79 ^@ Similarity ^@ Belongs to the bacterial sugar transferase family. http://togogenome.org/gene/546414:DEIDE_RS07115 ^@ http://purl.uniprot.org/uniprot/C1CVD2 ^@ Caution|||Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.|||Binds 1 Mn(2+) ion per subunit.|||Cytoplasm|||Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS03050 ^@ http://purl.uniprot.org/uniprot/C1D0J7 ^@ Function|||Similarity|||Subunit ^@ Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln).|||Belongs to the GatC family.|||Heterotrimer of A, B and C subunits. http://togogenome.org/gene/546414:DEIDE_RS12140 ^@ http://purl.uniprot.org/uniprot/C1CYV3 ^@ Function|||Similarity ^@ Belongs to the MinE family.|||Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell. http://togogenome.org/gene/546414:DEIDE_RS01040 ^@ http://purl.uniprot.org/uniprot/C1CYG8 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS07075 ^@ http://purl.uniprot.org/uniprot/C1CVC4 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family.|||Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS14965 ^@ http://purl.uniprot.org/uniprot/C1D2Q6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS01875 ^@ http://purl.uniprot.org/uniprot/C1CZB5 ^@ Function|||Similarity|||Subunit ^@ Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.|||Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA. Binds to the 5S rRNA independently of L5 and L18.|||This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. http://togogenome.org/gene/546414:DEIDE_RS10760 ^@ http://purl.uniprot.org/uniprot/C1CXE7 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL15 family.|||Binds to the 23S rRNA.|||Part of the 50S ribosomal subunit. http://togogenome.org/gene/546414:DEIDE_RS10695 ^@ http://purl.uniprot.org/uniprot/C1CXD4 ^@ Domain|||Function|||Similarity|||Subunit ^@ Belongs to the RNA polymerase alpha chain family.|||DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.|||Homodimer. The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.|||The N-terminal domain is essential for RNAP assembly and basal transcription, whereas the C-terminal domain is involved in interaction with transcriptional regulators and with upstream promoter elements. http://togogenome.org/gene/546414:DEIDE_RS06045 ^@ http://purl.uniprot.org/uniprot/C1CUT0 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the thioester dehydratase family. FabZ subfamily.|||Cytoplasm|||Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. http://togogenome.org/gene/546414:DEIDE_RS00970 ^@ http://purl.uniprot.org/uniprot/C1CYF5 ^@ Caution|||Function|||Similarity ^@ Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif. http://togogenome.org/gene/546414:DEIDE_RS07170 ^@ http://purl.uniprot.org/uniprot/C1CVE2 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the aconitase/IPM isomerase family. LeuC type 2 subfamily.|||Binds 1 [4Fe-4S] cluster per subunit.|||Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate.|||Heterodimer of LeuC and LeuD. http://togogenome.org/gene/546414:DEIDE_RS07200 ^@ http://purl.uniprot.org/uniprot/C1CVE8 ^@ Similarity ^@ Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. http://togogenome.org/gene/546414:DEIDE_RS07195 ^@ http://purl.uniprot.org/uniprot/C1CVE7 ^@ Similarity ^@ Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. http://togogenome.org/gene/546414:DEIDE_RS09150 ^@ http://purl.uniprot.org/uniprot/C1CWI2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/546414:DEIDE_RS11340 ^@ http://purl.uniprot.org/uniprot/C1CY24 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the bacterial CoaD family.|||Cytoplasm|||Homohexamer.|||Reversibly transfers an adenylyl group from ATP to 4'-phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. http://togogenome.org/gene/546414:DEIDE_RS00530 ^@ http://purl.uniprot.org/uniprot/C1CXU1 ^@ Function|||Similarity ^@ Belongs to the V-ATPase V0D/AC39 subunit family.|||Produces ATP from ADP in the presence of a proton gradient across the membrane. http://togogenome.org/gene/546414:DEIDE_RS09180 ^@ http://purl.uniprot.org/uniprot/C1CWI8 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/546414:DEIDE_RS05200 ^@ http://purl.uniprot.org/uniprot/C1D1Q6 ^@ Similarity ^@ Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. http://togogenome.org/gene/546414:DEIDE_RS04165 ^@ http://purl.uniprot.org/uniprot/C1D149 ^@ Similarity ^@ Belongs to the enoyl-CoA hydratase/isomerase family. http://togogenome.org/gene/546414:DEIDE_RS00605 ^@ http://purl.uniprot.org/uniprot/C1CY91 ^@ Caution|||Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins.|||Belongs to the AAA ATPase family.|||Binds 1 zinc ion per subunit.|||Cell membrane|||Homohexamer.|||In the C-terminal section; belongs to the peptidase M41 family.|||In the central section; belongs to the AAA ATPase family.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS11240 ^@ http://purl.uniprot.org/uniprot/C1CY04 ^@ Function|||Induction|||Similarity|||Subcellular Location Annotation|||Subunit ^@ ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.|||Belongs to the peptidase S16 family.|||By heat shock.|||Cytoplasm|||Homohexamer. Organized in a ring with a central cavity. http://togogenome.org/gene/546414:DEIDE_RS04235 ^@ http://purl.uniprot.org/uniprot/C1D163 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS11825 ^@ http://purl.uniprot.org/uniprot/C1CYP4 ^@ Function|||PTM|||Subunit ^@ Cleaved between Leu-106 and Arg-107 by the IrrE metalloprotease after exposure to radiation. Cleavage inactivates DdrOC, leading to derepression of the target genes.|||Forms at least dimers. Interacts with IrrE.|||Repressor specific for genes preceded by a radiation/desiccation response motif (RDRM) site, which is present upstream of several radiation-induced genes. http://togogenome.org/gene/546414:DEIDE_RS16780 ^@ http://purl.uniprot.org/uniprot/C1D3H5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS16560 ^@ http://purl.uniprot.org/uniprot/C1D3D4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS06770 ^@ http://purl.uniprot.org/uniprot/C1CV64 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the peptidase M3B family.|||Binds 1 zinc ion.|||Has oligopeptidase activity and degrades a variety of small bioactive peptides. http://togogenome.org/gene/546414:DEIDE_RS04985 ^@ http://purl.uniprot.org/uniprot/C1D1L3 ^@ Function|||Similarity ^@ Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.|||Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs. http://togogenome.org/gene/546414:DEIDE_RS07255 ^@ http://purl.uniprot.org/uniprot/C1CVF9 ^@ Similarity ^@ Belongs to the glutamine synthetase family. http://togogenome.org/gene/546414:DEIDE_RS12275 ^@ http://purl.uniprot.org/uniprot/C1CYY0 ^@ Similarity ^@ Belongs to the peptidase S1C family. http://togogenome.org/gene/546414:DEIDE_RS07665 ^@ http://purl.uniprot.org/uniprot/C1CVN9 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome.|||Belongs to the EF-Ts family.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS09020 ^@ http://purl.uniprot.org/uniprot/C1CWF8 ^@ Function|||Similarity ^@ Belongs to the DNA mismatch repair MutL/HexB family.|||This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. http://togogenome.org/gene/546414:DEIDE_RS12235 ^@ http://purl.uniprot.org/uniprot/C1CYX2 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PurS family.|||Cytoplasm|||Part of the FGAM synthase complex composed of 1 PurL, 1 PurQ and 2 PurS subunits.|||Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL. http://togogenome.org/gene/546414:DEIDE_RS10680 ^@ http://purl.uniprot.org/uniprot/C1CXD1 ^@ Similarity ^@ Belongs to the thioredoxin family. http://togogenome.org/gene/546414:DEIDE_RS13375 ^@ http://purl.uniprot.org/uniprot/C1D0A9 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the MnmG family.|||Cytoplasm|||Homodimer. Heterotetramer of two MnmE and two MnmG subunits.|||NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34. http://togogenome.org/gene/546414:DEIDE_RS16130 ^@ http://purl.uniprot.org/uniprot/C1D443 ^@ Similarity ^@ Belongs to the bacterial solute-binding protein 3 family. http://togogenome.org/gene/546414:DEIDE_RS05980 ^@ http://purl.uniprot.org/uniprot/C1CUR7 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the acetylglutamate kinase family. LysZ subfamily.|||Catalyzes the phosphorylation of LysW-gamma-alpha-aminoadipate.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS07260 ^@ http://purl.uniprot.org/uniprot/C1CVG0 ^@ Similarity ^@ Belongs to the glutamine synthetase family. http://togogenome.org/gene/546414:DEIDE_RS09920 ^@ http://purl.uniprot.org/uniprot/C1CWY2 ^@ Similarity ^@ Belongs to the zinc-containing alcohol dehydrogenase family. http://togogenome.org/gene/546414:DEIDE_RS08010 ^@ http://purl.uniprot.org/uniprot/C1CVV9 ^@ Cofactor ^@ Binds 1 FAD per subunit. http://togogenome.org/gene/546414:DEIDE_RS11760 ^@ http://purl.uniprot.org/uniprot/C1CYN2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS11445 ^@ http://purl.uniprot.org/uniprot/C1CY45 ^@ Similarity ^@ Belongs to the peptidase S9C family. http://togogenome.org/gene/546414:DEIDE_RS02915 ^@ http://purl.uniprot.org/uniprot/C1D0H1 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the complex I subunit 3 family.|||Cell membrane|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. http://togogenome.org/gene/546414:DEIDE_RS14250 ^@ http://purl.uniprot.org/uniprot/C1D2B5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS05540 ^@ http://purl.uniprot.org/uniprot/C1CUH8 ^@ Similarity ^@ Belongs to the thiolase-like superfamily. Thiolase family. http://togogenome.org/gene/546414:DEIDE_RS15655 ^@ http://purl.uniprot.org/uniprot/C1D342 ^@ Similarity ^@ Belongs to the precorrin methyltransferase family. http://togogenome.org/gene/546414:DEIDE_RS01825 ^@ http://purl.uniprot.org/uniprot/C1CZA5 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. http://togogenome.org/gene/546414:DEIDE_RS06165 ^@ http://purl.uniprot.org/uniprot/C1CUV3 ^@ Function|||Similarity|||Subunit ^@ Belongs to the shikimate dehydrogenase family.|||Homodimer.|||Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). http://togogenome.org/gene/546414:DEIDE_RS01520 ^@ http://purl.uniprot.org/uniprot/C1CZ47 ^@ Subcellular Location Annotation ^@ Cell outer membrane|||Periplasm http://togogenome.org/gene/546414:DEIDE_RS14025 ^@ http://purl.uniprot.org/uniprot/C1D268 ^@ Similarity ^@ Belongs to the peptidase S8 family. http://togogenome.org/gene/546414:DEIDE_RS06005 ^@ http://purl.uniprot.org/uniprot/C1CUS2 ^@ Caution|||Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the NnrD/CARKD family.|||Belongs to the NnrE/AIBP family.|||Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.|||Binds 1 potassium ion per subunit.|||Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.|||Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX.|||Homotetramer.|||In the C-terminal section; belongs to the NnrD/CARKD family.|||In the N-terminal section; belongs to the NnrE/AIBP family.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS11150 ^@ http://purl.uniprot.org/uniprot/C1CXY5 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the RecA family.|||Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS05850 ^@ http://purl.uniprot.org/uniprot/C1CUP0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS13890 ^@ http://purl.uniprot.org/uniprot/C1D238 ^@ Similarity ^@ Belongs to the peptidase S8 family. http://togogenome.org/gene/546414:DEIDE_RS11370 ^@ http://purl.uniprot.org/uniprot/C1CY30 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS05950 ^@ http://purl.uniprot.org/uniprot/C1CUR1 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the NusA family.|||Cytoplasm|||Monomer. Binds directly to the core enzyme of the DNA-dependent RNA polymerase and to nascent RNA.|||Participates in both transcription termination and antitermination. http://togogenome.org/gene/546414:DEIDE_RS03005 ^@ http://purl.uniprot.org/uniprot/C1D0I9 ^@ Similarity ^@ Belongs to the TelA family. http://togogenome.org/gene/546414:DEIDE_RS17365 ^@ http://purl.uniprot.org/uniprot/C1D3U0 ^@ Similarity ^@ Belongs to the zinc-containing alcohol dehydrogenase family. http://togogenome.org/gene/546414:DEIDE_RS00915 ^@ http://purl.uniprot.org/uniprot/C1CYE4 ^@ Similarity ^@ Belongs to the thiolase-like superfamily. Thiolase family. http://togogenome.org/gene/546414:DEIDE_RS05430 ^@ http://purl.uniprot.org/uniprot/C1D1U9 ^@ Similarity ^@ Belongs to the PspA/IM30 family. http://togogenome.org/gene/546414:DEIDE_RS02865 ^@ http://purl.uniprot.org/uniprot/C1D0G1 ^@ Function|||Similarity|||Subunit ^@ Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.|||Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity.|||Homodimer. http://togogenome.org/gene/546414:DEIDE_RS12395 ^@ http://purl.uniprot.org/uniprot/C1CZD8 ^@ Cofactor|||Similarity ^@ Belongs to the RtcB family.|||Binds 2 manganese ions per subunit. http://togogenome.org/gene/546414:DEIDE_RS19785 ^@ http://purl.uniprot.org/uniprot/C1D1V2 ^@ Similarity ^@ Belongs to the ParB family. http://togogenome.org/gene/546414:DEIDE_RS11835 ^@ http://purl.uniprot.org/uniprot/C1CYP6 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the peptidase M32 family.|||Binds 1 zinc ion per subunit.|||Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. http://togogenome.org/gene/546414:DEIDE_RS08490 ^@ http://purl.uniprot.org/uniprot/C1CW54 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the glycosyltransferase 4 family. MraY subfamily.|||Catalyzes the initial step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan: transfers peptidoglycan precursor phospho-MurNAc-pentapeptide from UDP-MurNAc-pentapeptide onto the lipid carrier undecaprenyl phosphate, yielding undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide, known as lipid I.|||Cell membrane http://togogenome.org/gene/546414:DEIDE_RS09285 ^@ http://purl.uniprot.org/uniprot/C1CWK9 ^@ Similarity ^@ Belongs to the acylphosphatase family. http://togogenome.org/gene/546414:DEIDE_RS08740 ^@ http://purl.uniprot.org/uniprot/C1CWA3 ^@ Cofactor|||Function|||PTM|||Similarity ^@ Activated by phosphorylation.|||Belongs to the phosphohexose mutase family.|||Binds 1 Mg(2+) ion per subunit.|||Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate. http://togogenome.org/gene/546414:DEIDE_RS04385 ^@ http://purl.uniprot.org/uniprot/C1D193 ^@ Function|||Similarity ^@ Belongs to the PNP/UDP phosphorylase family. Futalosine hydrolase subfamily.|||Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2). http://togogenome.org/gene/546414:DEIDE_RS01475 ^@ http://purl.uniprot.org/uniprot/C1CZ40 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the adenylosuccinate synthetase family.|||Binds 1 Mg(2+) ion per subunit.|||Cytoplasm|||Homodimer.|||Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP. http://togogenome.org/gene/546414:DEIDE_RS10320 ^@ http://purl.uniprot.org/uniprot/C1CX58 ^@ Similarity ^@ Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. http://togogenome.org/gene/546414:DEIDE_RS04055 ^@ http://purl.uniprot.org/uniprot/C1D128 ^@ Similarity ^@ Belongs to the ycf81 family. http://togogenome.org/gene/546414:DEIDE_RS09225 ^@ http://purl.uniprot.org/uniprot/C1CWJ7 ^@ Domain|||Similarity ^@ Belongs to the PurH family.|||The IMP cyclohydrolase activity resides in the N-terminal region. http://togogenome.org/gene/546414:DEIDE_RS00210 ^@ http://purl.uniprot.org/uniprot/C1CXN0 ^@ Similarity ^@ Belongs to the Glu/Leu/Phe/Val dehydrogenases family. http://togogenome.org/gene/546414:DEIDE_RS12665 ^@ http://purl.uniprot.org/uniprot/C1CZJ3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS06080 ^@ http://purl.uniprot.org/uniprot/C1CUT6 ^@ Similarity ^@ Belongs to the FemABX family. http://togogenome.org/gene/546414:DEIDE_RS10145 ^@ http://purl.uniprot.org/uniprot/C1CX23 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the shikimate kinase family.|||Binds 1 Mg(2+) ion per subunit.|||Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate.|||Cytoplasm|||Monomer. http://togogenome.org/gene/546414:DEIDE_RS07250 ^@ http://purl.uniprot.org/uniprot/C1CVF8 ^@ Similarity ^@ Belongs to the antibiotic N-acetyltransferase family. http://togogenome.org/gene/546414:DEIDE_RS07975 ^@ http://purl.uniprot.org/uniprot/C1CVV2 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the pyrroline-5-carboxylate reductase family.|||Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS15380 ^@ http://purl.uniprot.org/uniprot/C1D2Z0 ^@ Similarity ^@ In the N-terminal section; belongs to the phytochrome family. http://togogenome.org/gene/546414:DEIDE_RS01185 ^@ http://purl.uniprot.org/uniprot/C1CYJ6 ^@ Cofactor|||Similarity ^@ Belongs to the peptidase M42 family.|||Binds 2 divalent metal cations per subunit. http://togogenome.org/gene/546414:DEIDE_RS09590 ^@ http://purl.uniprot.org/uniprot/C1CWS1 ^@ Similarity ^@ Belongs to the thiolase-like superfamily. Thiolase family. http://togogenome.org/gene/546414:DEIDE_RS06530 ^@ http://purl.uniprot.org/uniprot/C1CV18 ^@ Function|||Similarity|||Subunit ^@ Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.|||Homotetramer.|||Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc. http://togogenome.org/gene/546414:DEIDE_RS11160 ^@ http://purl.uniprot.org/uniprot/C1CXY7 ^@ Subcellular Location Annotation ^@ Cell outer membrane|||Periplasm http://togogenome.org/gene/546414:DEIDE_RS04605 ^@ http://purl.uniprot.org/uniprot/C1D1D8 ^@ Similarity ^@ Belongs to the cysteine synthase/cystathionine beta-synthase family. http://togogenome.org/gene/546414:DEIDE_RS09455 ^@ http://purl.uniprot.org/uniprot/C1CWP4 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/546414:DEIDE_RS12805 ^@ http://purl.uniprot.org/uniprot/C1CZM1 ^@ Similarity ^@ Belongs to the peptidase S8 family. http://togogenome.org/gene/546414:DEIDE_RS01035 ^@ http://purl.uniprot.org/uniprot/C1CYG7 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the Nth/MutY family.|||Binds 1 [4Fe-4S] cluster.|||DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate. http://togogenome.org/gene/546414:DEIDE_RS14935 ^@ http://purl.uniprot.org/uniprot/C1D2Q0 ^@ Cofactor|||Similarity ^@ Belongs to the Fur family.|||Binds 1 Mn(2+) or Fe(2+) ion per subunit.|||Binds 1 zinc ion per subunit. http://togogenome.org/gene/546414:DEIDE_RS08725 ^@ http://purl.uniprot.org/uniprot/C1CWA0 ^@ Similarity ^@ Belongs to the glycosyl hydrolase 13 family. http://togogenome.org/gene/546414:DEIDE_RS04400 ^@ http://purl.uniprot.org/uniprot/C1D197 ^@ Caution|||Cofactor|||Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the DnaJ family.|||Binds 2 Zn(2+) ions per monomer.|||Cytoplasm|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.|||The J domain is necessary and sufficient to stimulate DnaK ATPase activity. Zinc center 1 plays an important role in the autonomous, DnaK-independent chaperone activity of DnaJ. Zinc center 2 is essential for interaction with DnaK and for DnaJ activity. http://togogenome.org/gene/546414:DEIDE_RS13560 ^@ http://purl.uniprot.org/uniprot/C1D1X3 ^@ Cofactor|||Similarity ^@ Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.|||Binds 1 FAD per subunit. http://togogenome.org/gene/546414:DEIDE_RS10770 ^@ http://purl.uniprot.org/uniprot/C1CXE9 ^@ Domain|||Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS5 family.|||Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body.|||Part of the 30S ribosomal subunit. Contacts proteins S4 and S8.|||The N-terminal domain interacts with the head of the 30S subunit; the C-terminal domain interacts with the body and contacts protein S4. The interaction surface between S4 and S5 is involved in control of translational fidelity.|||With S4 and S12 plays an important role in translational accuracy. http://togogenome.org/gene/546414:DEIDE_RS14040 ^@ http://purl.uniprot.org/uniprot/C1D270 ^@ Function|||Similarity ^@ Belongs to the SELO family.|||Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). http://togogenome.org/gene/546414:DEIDE_RS03635 ^@ http://purl.uniprot.org/uniprot/C1D0U7 ^@ Similarity ^@ Belongs to the bacterial solute-binding protein 5 family. http://togogenome.org/gene/546414:DEIDE_RS03475 ^@ http://purl.uniprot.org/uniprot/C1D0S0 ^@ Function|||Similarity|||Subunit ^@ Belongs to the RNA polymerase beta chain family.|||DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.|||The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription. http://togogenome.org/gene/546414:DEIDE_RS06265 ^@ http://purl.uniprot.org/uniprot/C1CUX2 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-I aminoacyl-tRNA synthetase family.|||Cytoplasm|||Monomer. http://togogenome.org/gene/546414:DEIDE_RS15675 ^@ http://purl.uniprot.org/uniprot/C1D346 ^@ Similarity ^@ Belongs to the SIMIBI class G3E GTPase family. ZNG1 subfamily. http://togogenome.org/gene/546414:DEIDE_RS10830 ^@ http://purl.uniprot.org/uniprot/C1CXG1 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL22 family.|||Part of the 50S ribosomal subunit.|||The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.|||This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). http://togogenome.org/gene/546414:DEIDE_RS14875 ^@ http://purl.uniprot.org/uniprot/C1D2N8 ^@ Activity Regulation|||Caution|||Function|||Similarity ^@ Belongs to the FGGY kinase family.|||Inhibited by fructose 1,6-bisphosphate (FBP).|||Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn-glycerol 3-phosphate.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS13810 ^@ http://purl.uniprot.org/uniprot/C1D223 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the TerC family.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS09565 ^@ http://purl.uniprot.org/uniprot/C1CWR6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the BI1 family.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS00175 ^@ http://purl.uniprot.org/uniprot/C1CXM3 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.|||Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS10690 ^@ http://purl.uniprot.org/uniprot/C1CXD3 ^@ Similarity|||Subunit ^@ Belongs to the bacterial ribosomal protein bL17 family.|||Part of the 50S ribosomal subunit. Contacts protein L32. http://togogenome.org/gene/546414:DEIDE_RS01295 ^@ http://purl.uniprot.org/uniprot/C1CZ02 ^@ Similarity ^@ Belongs to the peptidase S9C family. http://togogenome.org/gene/546414:DEIDE_RS10540 ^@ http://purl.uniprot.org/uniprot/C1CXA3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the heme-copper respiratory oxidase family.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS00190 ^@ http://purl.uniprot.org/uniprot/C1CXM6 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the QueC family.|||Binds 1 zinc ion per subunit.|||Catalyzes the ATP-dependent conversion of 7-carboxy-7-deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). http://togogenome.org/gene/546414:DEIDE_RS15700 ^@ http://purl.uniprot.org/uniprot/C1D351 ^@ Domain|||Function|||Miscellaneous|||Similarity ^@ Belongs to the CobB/CbiA family.|||Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source.|||Comprises of two domains. The C-terminal domain contains the binding site for glutamine and catalyzes the hydrolysis of this substrate to glutamate and ammonia. The N-terminal domain is anticipated to bind ATP and cobyrinate and catalyzes the ultimate synthesis of the diamide product. The ammonia produced via the glutaminase domain is probably translocated to the adjacent domain via a molecular tunnel, where it reacts with an activated intermediate.|||The a and c carboxylates of cobyrinate are activated for nucleophilic attack via formation of a phosphorylated intermediate by ATP. CbiA catalyzes first the amidation of the c-carboxylate, and then that of the a-carboxylate. http://togogenome.org/gene/546414:DEIDE_RS00545 ^@ http://purl.uniprot.org/uniprot/C1CXU4 ^@ Function|||Similarity ^@ Belongs to the ATPase alpha/beta chains family.|||Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit. http://togogenome.org/gene/546414:DEIDE_RS12230 ^@ http://purl.uniprot.org/uniprot/C1CYX1 ^@ Similarity ^@ Belongs to the SAICAR synthetase family. http://togogenome.org/gene/546414:DEIDE_RS12700 ^@ http://purl.uniprot.org/uniprot/C1CZK0 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bL27 family. http://togogenome.org/gene/546414:DEIDE_RS10095 ^@ http://purl.uniprot.org/uniprot/C1CX13 ^@ Similarity ^@ Belongs to the asp23 family. http://togogenome.org/gene/546414:DEIDE_RS05935 ^@ http://purl.uniprot.org/uniprot/C1CUQ7 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the SecD/SecF family. SecD subfamily.|||Belongs to the SecD/SecF family. SecF subfamily.|||Cell membrane|||Forms a complex with SecD. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF. Other proteins may also be involved.|||Forms a complex with SecF. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF. Other proteins may also be involved.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane|||Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. http://togogenome.org/gene/546414:DEIDE_RS11470 ^@ http://purl.uniprot.org/uniprot/C1CY48 ^@ Similarity ^@ Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. http://togogenome.org/gene/546414:DEIDE_RS04575 ^@ http://purl.uniprot.org/uniprot/C1D1D2 ^@ Function|||Similarity ^@ Belongs to the aconitase/IPM isomerase family.|||Catalyzes the isomerization of citrate to isocitrate via cis-aconitate. http://togogenome.org/gene/546414:DEIDE_RS14800 ^@ http://purl.uniprot.org/uniprot/C1D2M3 ^@ Similarity ^@ Belongs to the aldehyde dehydrogenase family. http://togogenome.org/gene/546414:DEIDE_RS04340 ^@ http://purl.uniprot.org/uniprot/C1D183 ^@ Caution|||Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Binds 1 Mg(2+) ion per subunit.|||Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain.|||Cytoplasm|||Homotrimer.|||In the C-terminal section; belongs to the transferase hexapeptide repeat family.|||In the N-terminal section; belongs to the N-acetylglucosamine-1-phosphate uridyltransferase family.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS16190 ^@ http://purl.uniprot.org/uniprot/C1D454 ^@ Similarity ^@ Belongs to the peptidase S8 family. http://togogenome.org/gene/546414:DEIDE_RS06350 ^@ http://purl.uniprot.org/uniprot/C1CUY9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS07185 ^@ http://purl.uniprot.org/uniprot/C1CVE5 ^@ Cofactor|||Similarity ^@ Belongs to the cytochrome b560 family.|||The heme is bound between the two transmembrane subunits. http://togogenome.org/gene/546414:DEIDE_RS00650 ^@ http://purl.uniprot.org/uniprot/C1CYA0 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS15 family.|||Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.|||One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.|||Part of the 30S ribosomal subunit. Forms a bridge to the 50S subunit in the 70S ribosome, contacting the 23S rRNA. http://togogenome.org/gene/546414:DEIDE_RS12245 ^@ http://purl.uniprot.org/uniprot/C1CYX4 ^@ Function|||Subcellular Location Annotation|||Subunit ^@ Cytoplasm|||Part of the FGAM synthase complex composed of 1 PurL, 1 PurQ and 2 PurS subunits.|||Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL. http://togogenome.org/gene/546414:DEIDE_RS15440 ^@ http://purl.uniprot.org/uniprot/C1D302 ^@ Similarity ^@ Belongs to the UDP-galactopyranose/dTDP-fucopyranose mutase family. http://togogenome.org/gene/546414:DEIDE_RS08385 ^@ http://purl.uniprot.org/uniprot/C1CW33 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the RNase HII family.|||Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.|||Manganese or magnesium. Binds 1 divalent metal ion per monomer in the absence of substrate. May bind a second metal ion after substrate binding. http://togogenome.org/gene/546414:DEIDE_RS04840 ^@ http://purl.uniprot.org/uniprot/C1D1I4 ^@ Activity Regulation|||Caution|||Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Activated by a monovalent cation that binds near, but not in, the active site. The most likely occupant of the site in vivo is potassium. Ion binding induces a conformational change that may alter substrate affinity.|||Belongs to the carbohydrate kinase PfkB family. Ribokinase subfamily.|||Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.|||Cytoplasm|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Requires a divalent cation, most likely magnesium in vivo, as an electrophilic catalyst to aid phosphoryl group transfer. It is the chelate of the metal and the nucleotide that is the actual substrate. http://togogenome.org/gene/546414:DEIDE_RS00980 ^@ http://purl.uniprot.org/uniprot/C1CYF7 ^@ Similarity ^@ Belongs to the low molecular weight phosphotyrosine protein phosphatase family. http://togogenome.org/gene/546414:DEIDE_RS00185 ^@ http://purl.uniprot.org/uniprot/C1CXM5 ^@ Caution|||Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the radical SAM superfamily. 7-carboxy-7-deazaguanine synthase family.|||Binds 1 S-adenosyl-L-methionine per subunit.|||Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.|||Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS02505 ^@ http://purl.uniprot.org/uniprot/C1D018 ^@ Function|||Similarity ^@ Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.|||Catalyzes the biosynthesis of agmatine from arginine. http://togogenome.org/gene/546414:DEIDE_RS09580 ^@ http://purl.uniprot.org/uniprot/C1CWR9 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the dCTP deaminase family.|||Catalyzes the deamination of dCTP to dUTP.|||Homotrimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS12655 ^@ http://purl.uniprot.org/uniprot/C1CZJ1 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS07985 ^@ http://purl.uniprot.org/uniprot/C1CVV4 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the RNA methyltransferase RsmE family.|||Cytoplasm|||Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. http://togogenome.org/gene/546414:DEIDE_RS12960 ^@ http://purl.uniprot.org/uniprot/C1CZQ0 ^@ Function|||Similarity ^@ Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.|||Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA. http://togogenome.org/gene/546414:DEIDE_RS13855 ^@ http://purl.uniprot.org/uniprot/E6RGA6 ^@ Similarity ^@ Belongs to the ROK (NagC/XylR) family. http://togogenome.org/gene/546414:DEIDE_RS16135 ^@ http://purl.uniprot.org/uniprot/C1D2C5 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the RecA family.|||Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS10785 ^@ http://purl.uniprot.org/uniprot/C1CXF2 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS8 family.|||One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.|||Part of the 30S ribosomal subunit. Contacts proteins S5 and S12. http://togogenome.org/gene/546414:DEIDE_RS03625 ^@ http://purl.uniprot.org/uniprot/C1D0U6 ^@ Function|||PTM|||Similarity|||Subcellular Location Annotation ^@ Belongs to the HSP33 family.|||Cytoplasm|||Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.|||Under oxidizing conditions two disulfide bonds are formed involving the reactive cysteines. Under reducing conditions zinc is bound to the reactive cysteines and the protein is inactive. http://togogenome.org/gene/546414:DEIDE_RS09805 ^@ http://purl.uniprot.org/uniprot/C1CWW0 ^@ Function|||Similarity ^@ Belongs to the PEP-utilizing enzyme family.|||Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate. http://togogenome.org/gene/546414:DEIDE_RS05010 ^@ http://purl.uniprot.org/uniprot/C1D1L8 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the methyltransferase superfamily. RsmH family.|||Cytoplasm|||Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. http://togogenome.org/gene/546414:DEIDE_RS04980 ^@ http://purl.uniprot.org/uniprot/C1D1L2 ^@ Function|||Similarity|||Subunit ^@ Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln).|||Belongs to the amidase family. GatA subfamily.|||Heterotrimer of A, B and C subunits. http://togogenome.org/gene/546414:DEIDE_RS11955 ^@ http://purl.uniprot.org/uniprot/C1CYR6 ^@ Function|||Similarity ^@ Belongs to the carbohydrate kinase PfkB family.|||Catalyzes the ATP-dependent phosphorylation of fructose-l-phosphate to fructose-l,6-bisphosphate. http://togogenome.org/gene/546414:DEIDE_RS11180 ^@ http://purl.uniprot.org/uniprot/C1CXZ2 ^@ Cofactor|||Similarity ^@ Belongs to the Fur family.|||Binds 1 zinc ion per subunit. http://togogenome.org/gene/546414:DEIDE_RS07245 ^@ http://purl.uniprot.org/uniprot/C1CVF7 ^@ Caution|||Cofactor|||Similarity|||Subunit ^@ Belongs to the ferredoxin--NADP reductase type 2 family.|||Binds 1 FAD per subunit.|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS09755 ^@ http://purl.uniprot.org/uniprot/C1CWV1 ^@ Similarity ^@ Belongs to the Cob(I)alamin adenosyltransferase family. http://togogenome.org/gene/546414:DEIDE_RS03470 ^@ http://purl.uniprot.org/uniprot/C1D0R9 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the RNA polymerase beta' chain family.|||Binds 1 Mg(2+) ion per subunit.|||Binds 2 Zn(2+) ions per subunit.|||DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.|||The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription. http://togogenome.org/gene/546414:DEIDE_RS00540 ^@ http://purl.uniprot.org/uniprot/C1CXU3 ^@ Function|||Similarity ^@ Belongs to the ATPase alpha/beta chains family.|||Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. http://togogenome.org/gene/546414:DEIDE_RS08475 ^@ http://purl.uniprot.org/uniprot/C1CW51 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the RNA methyltransferase RlmH family.|||Cytoplasm|||Homodimer.|||Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA. http://togogenome.org/gene/546414:DEIDE_RS13635 ^@ http://purl.uniprot.org/uniprot/C1D1Y8 ^@ Similarity ^@ Belongs to the DapA family. http://togogenome.org/gene/546414:DEIDE_RS03710 ^@ http://purl.uniprot.org/uniprot/C1D0W2 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-II aminoacyl-tRNA synthetase family.|||Binds 1 zinc ion per subunit.|||Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). Also edits incorrectly charged L-seryl-tRNA(Thr).|||Cytoplasm|||Homodimer. http://togogenome.org/gene/546414:DEIDE_RS16595 ^@ http://purl.uniprot.org/uniprot/C1D3E3 ^@ Subcellular Location Annotation ^@ Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS03555 ^@ http://purl.uniprot.org/uniprot/C1D0T3 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS19760 ^@ http://purl.uniprot.org/uniprot/C1CYS4 ^@ Similarity ^@ Belongs to the Nudix hydrolase family. http://togogenome.org/gene/546414:DEIDE_RS10025 ^@ http://purl.uniprot.org/uniprot/C1CX00 ^@ Caution|||Function|||Similarity ^@ Belongs to the Dus family. DusA subfamily.|||Belongs to the dus family.|||Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS01340 ^@ http://purl.uniprot.org/uniprot/C1CZ11 ^@ Similarity|||Subunit ^@ Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.|||Homodimer. http://togogenome.org/gene/546414:DEIDE_RS07885 ^@ http://purl.uniprot.org/uniprot/C1CVT4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/546414:DEIDE_RS13265 ^@ http://purl.uniprot.org/uniprot/C1D088 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation ^@ Cytoplasm|||In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family.|||In the N-terminal section; belongs to the CobB/CobQ family.|||Involved in acetate metabolism.|||The N-terminal region seems to be important for proper quaternary structure. The C-terminal region contains the substrate-binding site. http://togogenome.org/gene/546414:DEIDE_RS03170 ^@ http://purl.uniprot.org/uniprot/C1D0M0 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. http://togogenome.org/gene/546414:DEIDE_RS17595 ^@ http://purl.uniprot.org/uniprot/C1D3Y1 ^@ Similarity ^@ Belongs to the metallophosphoesterase superfamily. YfcE family. http://togogenome.org/gene/546414:DEIDE_RS17590 ^@ http://purl.uniprot.org/uniprot/C1D3Y0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the MIP/aquaporin (TC 1.A.8) family.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS08760 ^@ http://purl.uniprot.org/uniprot/C1CWA6 ^@ Function|||Similarity|||Subunit ^@ Belongs to the NAD synthetase family.|||Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.|||Homodimer. http://togogenome.org/gene/546414:DEIDE_RS16555 ^@ http://purl.uniprot.org/uniprot/C1D3D3 ^@ Similarity ^@ Belongs to the bacterial solute-binding protein 5 family. http://togogenome.org/gene/546414:DEIDE_RS05185 ^@ http://purl.uniprot.org/uniprot/C1D1Q3 ^@ Caution|||Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the anthranilate phosphoribosyltransferase family.|||Binds 2 magnesium ions per monomer.|||Catalyzes the transfer of the phosphoribosyl group of 5-phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA).|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS15800 ^@ http://purl.uniprot.org/uniprot/C1D369 ^@ Similarity ^@ Belongs to the PstS family. http://togogenome.org/gene/546414:DEIDE_RS00550 ^@ http://purl.uniprot.org/uniprot/C1CXU5 ^@ Function|||Similarity ^@ Belongs to the V-ATPase D subunit family.|||Produces ATP from ADP in the presence of a proton gradient across the membrane. http://togogenome.org/gene/546414:DEIDE_RS02855 ^@ http://purl.uniprot.org/uniprot/C1D0F9 ^@ Similarity ^@ Belongs to the AAA ATPase family. RarA/MGS1/WRNIP1 subfamily. http://togogenome.org/gene/546414:DEIDE_RS10780 ^@ http://purl.uniprot.org/uniprot/C1CXF1 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL6 family.|||Part of the 50S ribosomal subunit.|||This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center. http://togogenome.org/gene/546414:DEIDE_RS04905 ^@ http://purl.uniprot.org/uniprot/C1D1J8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the ClpS family.|||Binds to the N-terminal domain of the chaperone ClpA.|||Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation. http://togogenome.org/gene/546414:DEIDE_RS10180 ^@ http://purl.uniprot.org/uniprot/C1CX29 ^@ Function|||Similarity ^@ Belongs to the MqnA/MqnD family. MqnD subfamily.|||Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2). http://togogenome.org/gene/546414:DEIDE_RS06780 ^@ http://purl.uniprot.org/uniprot/C1CV66 ^@ Function|||Similarity|||Subunit ^@ Belongs to the TrpB family.|||Tetramer of two alpha and two beta chains.|||The beta subunit is responsible for the synthesis of L-tryptophan from indole and L-serine. http://togogenome.org/gene/546414:DEIDE_RS08140 ^@ http://purl.uniprot.org/uniprot/C1CVY5 ^@ Cofactor|||Function ^@ Binds 2 [4Fe-4S] clusters.|||Component of a complex that catalyzes the oxidation of glycolate to glyoxylate. http://togogenome.org/gene/546414:DEIDE_RS01670 ^@ http://purl.uniprot.org/uniprot/C1CZ75 ^@ Similarity ^@ Belongs to the DinB family. http://togogenome.org/gene/546414:DEIDE_RS03835 ^@ http://purl.uniprot.org/uniprot/C1D0Y6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the GSP I family.|||Cell outer membrane|||Membrane|||Periplasm http://togogenome.org/gene/546414:DEIDE_RS09895 ^@ http://purl.uniprot.org/uniprot/C1CWX7 ^@ Similarity ^@ Belongs to the thiolase-like superfamily. Thiolase family. http://togogenome.org/gene/546414:DEIDE_RS14345 ^@ http://purl.uniprot.org/uniprot/C1D2D4 ^@ Similarity ^@ Belongs to the thiolase-like superfamily. Thiolase family. http://togogenome.org/gene/546414:DEIDE_RS19035 ^@ http://purl.uniprot.org/uniprot/C1CWE7 ^@ Cofactor|||Similarity ^@ Belongs to the Cu-Zn superoxide dismutase family.|||Binds 1 copper ion per subunit. http://togogenome.org/gene/546414:DEIDE_RS12515 ^@ http://purl.uniprot.org/uniprot/C1CZG2 ^@ Similarity ^@ Belongs to the GSP E family. http://togogenome.org/gene/546414:DEIDE_RS02375 ^@ http://purl.uniprot.org/uniprot/C1CZZ3 ^@ Similarity ^@ Belongs to the adrenodoxin/putidaredoxin family. http://togogenome.org/gene/546414:DEIDE_RS13835 ^@ http://purl.uniprot.org/uniprot/C1D228 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/546414:DEIDE_RS14870 ^@ http://purl.uniprot.org/uniprot/C1D2N7 ^@ Similarity ^@ Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. http://togogenome.org/gene/546414:DEIDE_RS09670 ^@ http://purl.uniprot.org/uniprot/C1CWT7 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the ketol-acid reductoisomerase family.|||Binds 2 magnesium ions per subunit.|||Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. http://togogenome.org/gene/546414:DEIDE_RS02565 ^@ http://purl.uniprot.org/uniprot/C1D028 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the ThiC family.|||Binds 1 [4Fe-4S] cluster per subunit. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.|||Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. http://togogenome.org/gene/546414:DEIDE_RS00215 ^@ http://purl.uniprot.org/uniprot/C1CXN1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the uridine kinase family.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS05845 ^@ http://purl.uniprot.org/uniprot/C1CUN9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS10715 ^@ http://purl.uniprot.org/uniprot/C1CXD8 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bL36 family. http://togogenome.org/gene/546414:DEIDE_RS12980 ^@ http://purl.uniprot.org/uniprot/C1CZQ4 ^@ Cofactor|||Miscellaneous|||Similarity ^@ Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.|||Binds 1 FAD per subunit.|||The active site is a redox-active disulfide bond. http://togogenome.org/gene/546414:DEIDE_RS08155 ^@ http://purl.uniprot.org/uniprot/C1CVY8 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS09040 ^@ http://purl.uniprot.org/uniprot/C1CWG2 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.|||Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer. http://togogenome.org/gene/546414:DEIDE_RS02265 ^@ http://purl.uniprot.org/uniprot/C1CZX1 ^@ Similarity ^@ Belongs to the FUN14 family. http://togogenome.org/gene/546414:DEIDE_RS08070 ^@ http://purl.uniprot.org/uniprot/C1CVX1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/546414:DEIDE_RS04650 ^@ http://purl.uniprot.org/uniprot/C1D1E7 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS10705 ^@ http://purl.uniprot.org/uniprot/C1CXD6 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS11 family.|||Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome.|||Part of the 30S ribosomal subunit. Interacts with proteins S7 and S18. Binds to IF-3. http://togogenome.org/gene/546414:DEIDE_RS04120 ^@ http://purl.uniprot.org/uniprot/C1D141 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the NAGSA dehydrogenase family. Type 2 subfamily.|||Catalyzes the NADPH-dependent reduction of N-acetyl-5-glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS09200 ^@ http://purl.uniprot.org/uniprot/C1CWJ2 ^@ Similarity ^@ Belongs to the Nudix hydrolase family. http://togogenome.org/gene/546414:DEIDE_RS08100 ^@ http://purl.uniprot.org/uniprot/C1CVX7 ^@ Cofactor|||Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation ^@ Belongs to the radical SAM superfamily. RlmN family.|||Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.|||Cytoplasm|||Reaction proceeds by a ping-pong mechanism involving intermediate methylation of a conserved cysteine residue.|||Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. http://togogenome.org/gene/546414:DEIDE_RS10860 ^@ http://purl.uniprot.org/uniprot/C1CXG7 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS10 family.|||Involved in the binding of tRNA to the ribosomes.|||Part of the 30S ribosomal subunit. http://togogenome.org/gene/546414:DEIDE_RS09355 ^@ http://purl.uniprot.org/uniprot/C1CWM3 ^@ Similarity ^@ Belongs to the peptidase S8 family. http://togogenome.org/gene/546414:DEIDE_RS08440 ^@ http://purl.uniprot.org/uniprot/C1CW44 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the FtsA/MreB family.|||Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring.|||Cell membrane|||Self-interacts. Interacts with FtsZ. http://togogenome.org/gene/546414:DEIDE_RS13185 ^@ http://purl.uniprot.org/uniprot/C1D074 ^@ Similarity ^@ Belongs to the Nth/MutY family. http://togogenome.org/gene/546414:DEIDE_RS05825 ^@ http://purl.uniprot.org/uniprot/C1CUN5 ^@ Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ArgJ family.|||Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate.|||Cytoplasm|||Heterotetramer of two alpha and two beta chains.|||Some bacteria possess a monofunctional ArgJ, i.e., capable of catalyzing only the fifth step of the arginine biosynthetic pathway. http://togogenome.org/gene/546414:DEIDE_RS06900 ^@ http://purl.uniprot.org/uniprot/C1CV90 ^@ Caution ^@ Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS16050 ^@ http://purl.uniprot.org/uniprot/C1D427 ^@ Similarity ^@ Belongs to the bacterial histone-like protein family. http://togogenome.org/gene/546414:DEIDE_RS04175 ^@ http://purl.uniprot.org/uniprot/C1D151 ^@ Function|||Similarity ^@ Belongs to the GreA/GreB family.|||Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. http://togogenome.org/gene/546414:DEIDE_RS03295 ^@ http://purl.uniprot.org/uniprot/C1D0N9 ^@ Function|||Similarity ^@ Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.|||Involved in the type II fatty acid elongation cycle. Catalyzes the elongation of a wide range of acyl-ACP by the addition of two carbons from malonyl-ACP to an acyl acceptor. Can efficiently catalyze the conversion of palmitoleoyl-ACP (cis-hexadec-9-enoyl-ACP) to cis-vaccenoyl-ACP (cis-octadec-11-enoyl-ACP), an essential step in the thermal regulation of fatty acid composition. http://togogenome.org/gene/546414:DEIDE_RS02140 ^@ http://purl.uniprot.org/uniprot/C1CZU6 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the phosphopentomutase family.|||Binds 1 or 2 manganese ions.|||Cytoplasm|||Phosphotransfer between the C1 and C5 carbon atoms of pentose. http://togogenome.org/gene/546414:DEIDE_RS10500 ^@ http://purl.uniprot.org/uniprot/C1CX95 ^@ Similarity ^@ Belongs to the FPP/GGPP synthase family. http://togogenome.org/gene/546414:DEIDE_RS13195 ^@ http://purl.uniprot.org/uniprot/C1D076 ^@ Function|||Similarity ^@ Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus.|||Belongs to the Fmt family. http://togogenome.org/gene/546414:DEIDE_RS17475 ^@ http://purl.uniprot.org/uniprot/C1D3V8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the autoinducer-2 exporter (AI-2E) (TC 2.A.86) family.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS00905 ^@ http://purl.uniprot.org/uniprot/C1CYE3 ^@ Similarity ^@ Belongs to the cytochrome P450 family. http://togogenome.org/gene/546414:DEIDE_RS04805 ^@ http://purl.uniprot.org/uniprot/C1D1H7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the CcmB/CycW/HelB family.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS09660 ^@ http://purl.uniprot.org/uniprot/C1CWT5 ^@ Cofactor|||Similarity ^@ Belongs to the TPP enzyme family.|||Binds 1 Mg(2+) ion per subunit.|||Binds 1 thiamine pyrophosphate per subunit. http://togogenome.org/gene/546414:DEIDE_RS13320 ^@ http://purl.uniprot.org/uniprot/C1D099 ^@ Similarity ^@ Belongs to the TrpF family. http://togogenome.org/gene/546414:DEIDE_RS13135 ^@ http://purl.uniprot.org/uniprot/C1D064 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the XseA family.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS10750 ^@ http://purl.uniprot.org/uniprot/C1CXE5 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the adenylate kinase family.|||Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism.|||Consists of three domains, a large central CORE domain and two small peripheral domains, NMPbind and LID, which undergo movements during catalysis. The LID domain closes over the site of phosphoryl transfer upon ATP binding. Assembling and dissambling the active center during each catalytic cycle provides an effective means to prevent ATP hydrolysis.|||Cytoplasm|||Monomer. http://togogenome.org/gene/546414:DEIDE_RS09815 ^@ http://purl.uniprot.org/uniprot/C1CWW2 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the GPI family.|||Catalyzes the reversible isomerization of glucose-6-phosphate to fructose-6-phosphate.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS04795 ^@ http://purl.uniprot.org/uniprot/C1D1H5 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the CcmE/CycJ family.|||Cell membrane|||Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. http://togogenome.org/gene/546414:DEIDE_RS07040 ^@ http://purl.uniprot.org/uniprot/C1CVB7 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS06095 ^@ http://purl.uniprot.org/uniprot/C1CUT9 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes.|||Belongs to the RimM family.|||Binds ribosomal protein uS19.|||Cytoplasm|||The PRC barrel domain binds ribosomal protein uS19. http://togogenome.org/gene/546414:DEIDE_RS09700 ^@ http://purl.uniprot.org/uniprot/C1CWU2 ^@ Function|||Similarity|||Subunit ^@ Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.|||Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-ketoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate).|||Homodimer. http://togogenome.org/gene/546414:DEIDE_RS01435 ^@ http://purl.uniprot.org/uniprot/C1CZ32 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.|||Could methylate the ribose at the nucleotide 34 wobble position in tRNA.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS11510 ^@ http://purl.uniprot.org/uniprot/C1CY56 ^@ Function|||Similarity ^@ Belongs to the methylglyoxal synthase family.|||Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate. http://togogenome.org/gene/546414:DEIDE_RS01775 ^@ http://purl.uniprot.org/uniprot/C1CZ95 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/546414:DEIDE_RS11750 ^@ http://purl.uniprot.org/uniprot/C1CYN0 ^@ Similarity ^@ Belongs to the BMP lipoprotein family. http://togogenome.org/gene/546414:DEIDE_RS07155 ^@ http://purl.uniprot.org/uniprot/C1CVD9 ^@ Caution|||Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the isocitrate and isopropylmalate dehydrogenases family. LeuB type 1 subfamily.|||Binds 1 Mg(2+) or Mn(2+) ion per subunit.|||Catalyzes the oxidation of 3-carboxy-2-hydroxy-4-methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2-oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.|||Cytoplasm|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS07880 ^@ http://purl.uniprot.org/uniprot/C1CVT3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/546414:DEIDE_RS10755 ^@ http://purl.uniprot.org/uniprot/C1CXE6 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the SecY/SEC61-alpha family.|||Cell membrane|||Component of the Sec protein translocase complex. Heterotrimer consisting of SecY, SecE and SecG subunits. The heterotrimers can form oligomers, although 1 heterotrimer is thought to be able to translocate proteins. Interacts with the ribosome. Interacts with SecDF, and other proteins may be involved. Interacts with SecA.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane|||The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. http://togogenome.org/gene/546414:DEIDE_RS16775 ^@ http://purl.uniprot.org/uniprot/C1D3H4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS10615 ^@ http://purl.uniprot.org/uniprot/C1CXB8 ^@ Function|||Similarity ^@ Belongs to the class-I DAHP synthase family.|||Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP). http://togogenome.org/gene/546414:DEIDE_RS07780 ^@ http://purl.uniprot.org/uniprot/C1CVR3 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS13295 ^@ http://purl.uniprot.org/uniprot/C1D094 ^@ Function|||Similarity|||Subunit ^@ Associates with the 50S ribosomal subunit.|||Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.|||GTPase that plays an essential role in the late steps of ribosome biogenesis. http://togogenome.org/gene/546414:DEIDE_RS01820 ^@ http://purl.uniprot.org/uniprot/C1CZA4 ^@ Similarity ^@ Belongs to the peptidase S8 family. http://togogenome.org/gene/546414:DEIDE_RS06610 ^@ http://purl.uniprot.org/uniprot/C1CV33 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the UvrC family.|||Cytoplasm|||Interacts with UvrB in an incision complex.|||The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. http://togogenome.org/gene/546414:DEIDE_RS02685 ^@ http://purl.uniprot.org/uniprot/C1D0C6 ^@ Function|||Similarity ^@ Belongs to the ribonucleoside diphosphate reductase class-2 family.|||Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. http://togogenome.org/gene/546414:DEIDE_RS11815 ^@ http://purl.uniprot.org/uniprot/C1CYP2 ^@ Function|||Similarity|||Subunit ^@ Belongs to the MoaC family.|||Catalyzes the conversion of (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP).|||Homohexamer; trimer of dimers. http://togogenome.org/gene/546414:DEIDE_RS02925 ^@ http://purl.uniprot.org/uniprot/C1D0H3 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I 30 kDa subunit family.|||Cell membrane|||NDH-1 is composed of 15 different subunits. Subunits NuoB, C, D, E, F, and G constitute the peripheral sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/546414:DEIDE_RS07930 ^@ http://purl.uniprot.org/uniprot/C1CVU3 ^@ Similarity ^@ Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. http://togogenome.org/gene/546414:DEIDE_RS00500 ^@ http://purl.uniprot.org/uniprot/C1CXT5 ^@ Similarity ^@ Belongs to the P(II) protein family. http://togogenome.org/gene/546414:DEIDE_RS05375 ^@ http://purl.uniprot.org/uniprot/C1D1T9 ^@ Caution|||Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the RuvA family.|||Cytoplasm|||Has three domains with a flexible linker between the domains II and III and assumes an 'L' shape. Domain III is highly mobile and contacts RuvB.|||Homotetramer. Forms an RuvA(8)-RuvB(12)-Holliday junction (HJ) complex. HJ DNA is sandwiched between 2 RuvA tetramers; dsDNA enters through RuvA and exits via RuvB. An RuvB hexamer assembles on each DNA strand where it exits the tetramer. Each RuvB hexamer is contacted by two RuvA subunits (via domain III) on 2 adjacent RuvB subunits; this complex drives branch migration. In the full resolvosome a probable DNA-RuvA(4)-RuvB(12)-RuvC(2) complex forms which resolves the HJ.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||The RuvA-RuvB-RuvC complex processes Holliday junction (HJ) DNA during genetic recombination and DNA repair, while the RuvA-RuvB complex plays an important role in the rescue of blocked DNA replication forks via replication fork reversal (RFR). RuvA specifically binds to HJ cruciform DNA, conferring on it an open structure. The RuvB hexamer acts as an ATP-dependent pump, pulling dsDNA into and through the RuvAB complex. HJ branch migration allows RuvC to scan DNA until it finds its consensus sequence, where it cleaves and resolves the cruciform DNA. http://togogenome.org/gene/546414:DEIDE_RS12475 ^@ http://purl.uniprot.org/uniprot/C1CZF4 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. http://togogenome.org/gene/546414:DEIDE_RS11375 ^@ http://purl.uniprot.org/uniprot/C1CY31 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily.|||Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS08920 ^@ http://purl.uniprot.org/uniprot/C1CWE0 ^@ Similarity ^@ Belongs to the 4-hydroxybenzoyl-CoA thioesterase family. http://togogenome.org/gene/546414:DEIDE_RS13090 ^@ http://purl.uniprot.org/uniprot/C1D054 ^@ Similarity ^@ Belongs to the carbon-nitrogen hydrolase superfamily. http://togogenome.org/gene/546414:DEIDE_RS00985 ^@ http://purl.uniprot.org/uniprot/C1CYF8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Acetyl-CoA carboxylase is a heterohexamer composed of biotin carboxyl carrier protein (AccB), biotin carboxylase (AccC) and two subunits each of ACCase subunit alpha (AccA) and ACCase subunit beta (AccD).|||Belongs to the AccA family.|||Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS12850 ^@ http://purl.uniprot.org/uniprot/C1CZN0 ^@ Similarity ^@ Belongs to the peptidase M16 family. http://togogenome.org/gene/546414:DEIDE_RS15155 ^@ http://purl.uniprot.org/uniprot/C1D2U4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the major facilitator superfamily. TCR/Tet family.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS05000 ^@ http://purl.uniprot.org/uniprot/C1D1L6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the UPF0382 family.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS11390 ^@ http://purl.uniprot.org/uniprot/C1CY34 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the Cu-Zn superoxide dismutase family.|||Binds 1 copper ion per subunit.|||Binds 1 zinc ion per subunit.|||Destroys radicals which are normally produced within the cells and which are toxic to biological systems. http://togogenome.org/gene/546414:DEIDE_RS10430 ^@ http://purl.uniprot.org/uniprot/C1CX81 ^@ Similarity ^@ Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. http://togogenome.org/gene/546414:DEIDE_RS06985 ^@ http://purl.uniprot.org/uniprot/C1CVA6 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.|||Binds 2 divalent metal cations per subunit. Has a high-affinity and a low affinity metal-binding site. The true nature of the physiological cofactor is under debate. The enzyme is active with cobalt, zinc, manganese or divalent iron ions. Most likely, methionine aminopeptidases function as mononuclear Fe(2+)-metalloproteases under physiological conditions, and the catalytically relevant metal-binding site has been assigned to the histidine-containing high-affinity site.|||Monomer.|||Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed. http://togogenome.org/gene/546414:DEIDE_RS17395 ^@ http://purl.uniprot.org/uniprot/C1D3U5 ^@ Function|||PTM ^@ Cleaved between Leu-106 and Arg-107 by the IrrE metalloprotease after exposure to radiation. Cleavage inactivates DdrOP3, leading to derepression of the target genes.|||Repressor specific for genes preceded by a radiation/desiccation response motif (RDRM) site, which is present upstream of several radiation-induced genes. http://togogenome.org/gene/546414:DEIDE_RS13150 ^@ http://purl.uniprot.org/uniprot/C1D067 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS02175 ^@ http://purl.uniprot.org/uniprot/C1CZV3 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS02950 ^@ http://purl.uniprot.org/uniprot/C1D0H8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I subunit 1 family.|||Cell membrane|||NDH-1 is composed of 15 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. http://togogenome.org/gene/546414:DEIDE_RS02580 ^@ http://purl.uniprot.org/uniprot/C1D031 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ThiG family.|||Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.|||Cytoplasm|||Homotetramer. Forms heterodimers with either ThiH or ThiS. http://togogenome.org/gene/546414:DEIDE_RS03890 ^@ http://purl.uniprot.org/uniprot/C1D0Z8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.|||Binds the 23S rRNA.|||Part of the 50S ribosomal subunit. http://togogenome.org/gene/546414:DEIDE_RS01005 ^@ http://purl.uniprot.org/uniprot/C1CYG2 ^@ Similarity ^@ Belongs to the peptidase S8 family. http://togogenome.org/gene/546414:DEIDE_RS01405 ^@ http://purl.uniprot.org/uniprot/C1CZ26 ^@ Similarity ^@ Belongs to the bacterial solute-binding protein 1 family. http://togogenome.org/gene/546414:DEIDE_RS15855 ^@ http://purl.uniprot.org/uniprot/C1D380 ^@ Similarity ^@ Belongs to the acyl-CoA dehydrogenase family. http://togogenome.org/gene/546414:DEIDE_RS12950 ^@ http://purl.uniprot.org/uniprot/C1CZP8 ^@ Function|||Similarity ^@ Belongs to the BPG-independent phosphoglycerate mutase family. A-PGAM subfamily.|||Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate. http://togogenome.org/gene/546414:DEIDE_RS01125 ^@ http://purl.uniprot.org/uniprot/C1CYI5 ^@ Caution|||Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the UPP synthase family.|||Binds 2 magnesium ions per subunit.|||Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS10550 ^@ http://purl.uniprot.org/uniprot/C1CXA5 ^@ Caution|||Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the RuvB family.|||Cytoplasm|||Has 3 domains, the large (RuvB-L) and small ATPase (RuvB-S) domains and the C-terminal head (RuvB-H) domain. The head domain binds DNA, while the ATPase domains jointly bind ATP, ADP or are empty depending on the state of the subunit in the translocation cycle. During a single DNA translocation step the structure of each domain remains the same, but their relative positions change.|||Homohexamer. Forms an RuvA(8)-RuvB(12)-Holliday junction (HJ) complex. HJ DNA is sandwiched between 2 RuvA tetramers; dsDNA enters through RuvA and exits via RuvB. An RuvB hexamer assembles on each DNA strand where it exits the tetramer. Each RuvB hexamer is contacted by two RuvA subunits (via domain III) on 2 adjacent RuvB subunits; this complex drives branch migration. In the full resolvosome a probable DNA-RuvA(4)-RuvB(12)-RuvC(2) complex forms which resolves the HJ.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||The RuvA-RuvB-RuvC complex processes Holliday junction (HJ) DNA during genetic recombination and DNA repair, while the RuvA-RuvB complex plays an important role in the rescue of blocked DNA replication forks via replication fork reversal (RFR). RuvA specifically binds to HJ cruciform DNA, conferring on it an open structure. The RuvB hexamer acts as an ATP-dependent pump, pulling dsDNA into and through the RuvAB complex. RuvB forms 2 homohexamers on either side of HJ DNA bound by 1 or 2 RuvA tetramers; 4 subunits per hexamer contact DNA at a time. Coordinated motions by a converter formed by DNA-disengaged RuvB subunits stimulates ATP hydrolysis and nucleotide exchange. Immobilization of the converter enables RuvB to convert the ATP-contained energy into a lever motion, pulling 2 nucleotides of DNA out of the RuvA tetramer per ATP hydrolyzed, thus driving DNA branch migration. The RuvB motors rotate together with the DNA substrate, which together with the progressing nucleotide cycle form the mechanistic basis for DNA recombination by continuous HJ branch migration. Branch migration allows RuvC to scan DNA until it finds its consensus sequence, where it cleaves and resolves cruciform DNA. http://togogenome.org/gene/546414:DEIDE_RS14440 ^@ http://purl.uniprot.org/uniprot/C1D2F3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS15555 ^@ http://purl.uniprot.org/uniprot/C1D324 ^@ Caution|||Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the tryptophan 2,3-dioxygenase family.|||Binds 1 heme group per subunit.|||Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L-tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.|||Homotetramer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS05990 ^@ http://purl.uniprot.org/uniprot/C1CUR9 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the IspH family.|||Binds 1 [4Fe-4S] cluster per subunit.|||Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. http://togogenome.org/gene/546414:DEIDE_RS09875 ^@ http://purl.uniprot.org/uniprot/C1CWX3 ^@ Caution|||Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the KAE1 / TsaD family.|||Binds 1 Fe(2+) ion per subunit.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction. http://togogenome.org/gene/546414:DEIDE_RS02905 ^@ http://purl.uniprot.org/uniprot/C1D0G9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/546414:DEIDE_RS08455 ^@ http://purl.uniprot.org/uniprot/C1CW47 ^@ Activity Regulation|||Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Allosterically activated by ADP and other diphosphonucleosides, and allosterically inhibited by phosphoenolpyruvate.|||Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Prokaryotic clade 'B1' sub-subfamily.|||Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.|||Cytoplasm|||Homotetramer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS16410 ^@ http://purl.uniprot.org/uniprot/C1D4A2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS08860 ^@ http://purl.uniprot.org/uniprot/C1CWC7 ^@ Subcellular Location Annotation ^@ Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS04255 ^@ http://purl.uniprot.org/uniprot/C1D167 ^@ Similarity ^@ Belongs to the bacterial solute-binding protein 9 family. http://togogenome.org/gene/546414:DEIDE_RS06550 ^@ http://purl.uniprot.org/uniprot/C1CV22 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ A 50S ribosomal subunit assembly protein with GTPase activity, required for 50S subunit assembly at low temperatures, may also play a role in translation. Binds GTP and analogs. Binds the 70S ribosome between the 30S and 50S subunits, in a similar position as ribosome-bound EF-G; it contacts a number of ribosomal proteins, both rRNAs and the A-site tRNA.|||Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. BipA subfamily.|||Cytoplasm|||Monomer. http://togogenome.org/gene/546414:DEIDE_RS15115 ^@ http://purl.uniprot.org/uniprot/C1D2T7 ^@ Similarity ^@ Belongs to the bacteroidetes fimbrillin superfamily. FimB/Mfa2 family. http://togogenome.org/gene/546414:DEIDE_RS10420 ^@ http://purl.uniprot.org/uniprot/C1CX79 ^@ Similarity ^@ Belongs to the small heat shock protein (HSP20) family. http://togogenome.org/gene/546414:DEIDE_RS08175 ^@ http://purl.uniprot.org/uniprot/C1CVZ2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the TVP38/TMEM64 family.|||Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS04000 ^@ http://purl.uniprot.org/uniprot/C1D117 ^@ Similarity ^@ Belongs to the myoviridae tail sheath protein family. http://togogenome.org/gene/546414:DEIDE_RS09465 ^@ http://purl.uniprot.org/uniprot/C1CWP6 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS05390 ^@ http://purl.uniprot.org/uniprot/C1D1U2 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.|||Cytoplasm|||Homodimer.|||Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS00060 ^@ http://purl.uniprot.org/uniprot/C1CXK1 ^@ Caution|||Function ^@ Lacks conserved residue(s) required for the propagation of feature annotation.|||Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. http://togogenome.org/gene/546414:DEIDE_RS11905 ^@ http://purl.uniprot.org/uniprot/C1CYQ7 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS11650 ^@ http://purl.uniprot.org/uniprot/C1CY83 ^@ Similarity ^@ Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. http://togogenome.org/gene/546414:DEIDE_RS00675 ^@ http://purl.uniprot.org/uniprot/C1CYA3 ^@ Similarity ^@ Belongs to the peptidase M29 family. http://togogenome.org/gene/546414:DEIDE_RS16010 ^@ http://purl.uniprot.org/uniprot/C1D3B2 ^@ Similarity ^@ Belongs to the DinB family. http://togogenome.org/gene/546414:DEIDE_RS05465 ^@ http://purl.uniprot.org/uniprot/C1CUG3 ^@ Caution|||Similarity ^@ Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS15970 ^@ http://purl.uniprot.org/uniprot/C1D3A5 ^@ Similarity ^@ Belongs to the aldose epimerase family. http://togogenome.org/gene/546414:DEIDE_RS11105 ^@ http://purl.uniprot.org/uniprot/C1CXX6 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the HAM1 NTPase family.|||Binds 1 Mg(2+) ion per subunit.|||Homodimer.|||Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. http://togogenome.org/gene/546414:DEIDE_RS12910 ^@ http://purl.uniprot.org/uniprot/C1CZP0 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the GroES chaperonin family.|||Cytoplasm|||Heptamer of 7 subunits arranged in a ring. Interacts with the chaperonin GroEL.|||Together with the chaperonin GroEL, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding. GroES binds to the apical surface of the GroEL ring, thereby capping the opening of the GroEL channel. http://togogenome.org/gene/546414:DEIDE_RS06280 ^@ http://purl.uniprot.org/uniprot/C1CUX5 ^@ Similarity ^@ Belongs to the prephenate/arogenate dehydrogenase family. http://togogenome.org/gene/546414:DEIDE_RS06775 ^@ http://purl.uniprot.org/uniprot/C1CV65 ^@ Function|||Similarity|||Subunit ^@ Belongs to the TrpA family.|||Tetramer of two alpha and two beta chains.|||The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. http://togogenome.org/gene/546414:DEIDE_RS07010 ^@ http://purl.uniprot.org/uniprot/C1CVB1 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the IspG family.|||Binds 1 [4Fe-4S] cluster.|||Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. http://togogenome.org/gene/546414:DEIDE_RS17760 ^@ http://purl.uniprot.org/uniprot/C1D410 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ABC-3 integral membrane protein family.|||Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS04260 ^@ http://purl.uniprot.org/uniprot/C1D168 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bL28 family. http://togogenome.org/gene/546414:DEIDE_RS00065 ^@ http://purl.uniprot.org/uniprot/C1CXK2 ^@ Function|||Similarity ^@ Belongs to the bacterial ribosomal protein bS6 family.|||Binds together with bS18 to 16S ribosomal RNA. http://togogenome.org/gene/546414:DEIDE_RS01390 ^@ http://purl.uniprot.org/uniprot/C1CZ23 ^@ Similarity ^@ Belongs to the glycosyl hydrolase 43 family. http://togogenome.org/gene/546414:DEIDE_RS09080 ^@ http://purl.uniprot.org/uniprot/C1CWG9 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PlsY family.|||Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.|||Cell membrane|||Probably interacts with PlsX. http://togogenome.org/gene/546414:DEIDE_RS13895 ^@ http://purl.uniprot.org/uniprot/C1D239 ^@ Similarity ^@ Belongs to the Cu-Zn superoxide dismutase family. http://togogenome.org/gene/546414:DEIDE_RS15900 ^@ http://purl.uniprot.org/uniprot/C1D389 ^@ Similarity ^@ Belongs to the acyl-CoA dehydrogenase family. http://togogenome.org/gene/546414:DEIDE_RS08965 ^@ http://purl.uniprot.org/uniprot/C1CWE8 ^@ Similarity ^@ Belongs to the Cu-Zn superoxide dismutase family. http://togogenome.org/gene/546414:DEIDE_RS06040 ^@ http://purl.uniprot.org/uniprot/C1CUS9 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS10600 ^@ http://purl.uniprot.org/uniprot/C1CXB5 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the polyribonucleotide nucleotidyltransferase family.|||Cytoplasm|||Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction. http://togogenome.org/gene/546414:DEIDE_RS07290 ^@ http://purl.uniprot.org/uniprot/C1CVG6 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ClpA/ClpB family.|||Cytoplasm|||Homohexamer. The oligomerization is ATP-dependent.|||Homohexamer; The oligomerization is ATP-dependent.|||Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE. http://togogenome.org/gene/546414:DEIDE_RS11530 ^@ http://purl.uniprot.org/uniprot/C1CY60 ^@ Cofactor|||Similarity ^@ Belongs to the peptidase M3 family.|||Binds 1 zinc ion. http://togogenome.org/gene/546414:DEIDE_RS08190 ^@ http://purl.uniprot.org/uniprot/C1CVZ5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the purine/pyrimidine phosphoribosyltransferase family.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS05945 ^@ http://purl.uniprot.org/uniprot/C1CUQ9 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.|||Cytoplasm|||One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex. http://togogenome.org/gene/546414:DEIDE_RS08985 ^@ http://purl.uniprot.org/uniprot/C1CWF2 ^@ Function|||Similarity ^@ Belongs to the DNA mismatch repair MutS family.|||This protein is involved in the repair of mismatches in DNA. http://togogenome.org/gene/546414:DEIDE_RS01385 ^@ http://purl.uniprot.org/uniprot/C1CZ22 ^@ Similarity ^@ Belongs to the glycosyl hydrolase 43 family. http://togogenome.org/gene/546414:DEIDE_RS06620 ^@ http://purl.uniprot.org/uniprot/C1CV35 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-II aminoacyl-tRNA synthetase family.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/546414:DEIDE_RS06125 ^@ http://purl.uniprot.org/uniprot/C1CUU5 ^@ Similarity ^@ Belongs to the peptidase S41A family. http://togogenome.org/gene/546414:DEIDE_RS17880 ^@ http://purl.uniprot.org/uniprot/C1CZV0 ^@ Similarity ^@ Belongs to the peptidase S8 family. http://togogenome.org/gene/546414:DEIDE_RS03680 ^@ http://purl.uniprot.org/uniprot/C1D0V6 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the YbaB/EbfC family.|||Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.|||Homodimer.|||nucleoid http://togogenome.org/gene/546414:DEIDE_RS03915 ^@ http://purl.uniprot.org/uniprot/C1D103 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.|||Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner.|||Cytoplasm|||Monomer.|||The C-terminal coiled-coil domain is crucial for aminoacylation activity.|||ValRS has two distinct active sites: one for aminoacylation and one for editing. The misactivated threonine is translocated from the active site to the editing site. http://togogenome.org/gene/546414:DEIDE_RS03245 ^@ http://purl.uniprot.org/uniprot/C1D0N1 ^@ Function|||Induction|||Similarity|||Subcellular Location Annotation|||Subunit ^@ ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.|||Belongs to the peptidase S16 family.|||By heat shock.|||Cytoplasm|||Homohexamer. Organized in a ring with a central cavity. http://togogenome.org/gene/546414:DEIDE_RS12385 ^@ http://purl.uniprot.org/uniprot/C1CZD6 ^@ Caution|||Function|||PTM|||Similarity|||Subcellular Location Annotation ^@ Belongs to the MurCDEF family. MurE subfamily.|||Carboxylation is probably crucial for Mg(2+) binding and, consequently, for the gamma-phosphate positioning of ATP.|||Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS08660 ^@ http://purl.uniprot.org/uniprot/C1CW89 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the peptidase S26 family.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS06650 ^@ http://purl.uniprot.org/uniprot/C1CV41 ^@ Similarity ^@ Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. http://togogenome.org/gene/546414:DEIDE_RS00730 ^@ http://purl.uniprot.org/uniprot/C1CYB4 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the LuxS family.|||Binds 1 Fe cation per subunit.|||Homodimer.|||Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). http://togogenome.org/gene/546414:DEIDE_RS10875 ^@ http://purl.uniprot.org/uniprot/C1CXH0 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.|||Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS15870 ^@ http://purl.uniprot.org/uniprot/C1D383 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. http://togogenome.org/gene/546414:DEIDE_RS06970 ^@ http://purl.uniprot.org/uniprot/C1CVA3 ^@ Similarity ^@ Belongs to the helicase family. UvrD subfamily. http://togogenome.org/gene/546414:DEIDE_RS00920 ^@ http://purl.uniprot.org/uniprot/C1CYE5 ^@ Similarity ^@ Belongs to the YciI family. http://togogenome.org/gene/546414:DEIDE_RS00005 ^@ http://purl.uniprot.org/uniprot/C1CXJ1 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the DnaA family.|||Cytoplasm|||Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'-TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. http://togogenome.org/gene/546414:DEIDE_RS13705 ^@ http://purl.uniprot.org/uniprot/C1D202 ^@ Similarity ^@ Belongs to the RutC family. http://togogenome.org/gene/546414:DEIDE_RS10815 ^@ http://purl.uniprot.org/uniprot/C1CXF8 ^@ Similarity ^@ Belongs to the universal ribosomal protein uL29 family. http://togogenome.org/gene/546414:DEIDE_RS06695 ^@ http://purl.uniprot.org/uniprot/C1CV50 ^@ Function|||Similarity|||Subunit ^@ Belongs to the PdxS/SNZ family.|||Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively.|||In the presence of PdxT, forms a dodecamer of heterodimers. http://togogenome.org/gene/546414:DEIDE_RS04645 ^@ http://purl.uniprot.org/uniprot/C1D1E6 ^@ Similarity ^@ Belongs to the DNA glycosylase MPG family. http://togogenome.org/gene/546414:DEIDE_RS03620 ^@ http://purl.uniprot.org/uniprot/C1D0U5 ^@ Similarity ^@ Belongs to the peptidase S1C family. http://togogenome.org/gene/546414:DEIDE_RS03675 ^@ http://purl.uniprot.org/uniprot/C1D0V5 ^@ Function|||Similarity ^@ Belongs to the RecR family.|||May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. http://togogenome.org/gene/546414:DEIDE_RS00960 ^@ http://purl.uniprot.org/uniprot/C1CYF3 ^@ Similarity ^@ Belongs to the metallophosphoesterase superfamily. YfcE family. http://togogenome.org/gene/546414:DEIDE_RS10050 ^@ http://purl.uniprot.org/uniprot/C1CX04 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-II aminoacyl-tRNA synthetase family.|||Catalyzes the attachment of glycine to tRNA(Gly).|||Cytoplasm|||Homodimer. http://togogenome.org/gene/546414:DEIDE_RS15265 ^@ http://purl.uniprot.org/uniprot/C1D2W7 ^@ Similarity ^@ Belongs to the protein-tyrosine phosphatase family. http://togogenome.org/gene/546414:DEIDE_RS06240 ^@ http://purl.uniprot.org/uniprot/C1CUW7 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the Maf family. YhdE subfamily.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. http://togogenome.org/gene/546414:DEIDE_RS05150 ^@ http://purl.uniprot.org/uniprot/C1D1P6 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the EPSP synthase family.|||Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer. http://togogenome.org/gene/546414:DEIDE_RS03220 ^@ http://purl.uniprot.org/uniprot/C1D0M8 ^@ Similarity ^@ Belongs to the truncated hemoglobin family. Group II subfamily. http://togogenome.org/gene/546414:DEIDE_RS01260 ^@ http://purl.uniprot.org/uniprot/C1CYL1 ^@ Function|||Similarity ^@ Belongs to the DMRL synthase family.|||Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. http://togogenome.org/gene/546414:DEIDE_RS11140 ^@ http://purl.uniprot.org/uniprot/C1CXY3 ^@ Similarity ^@ Belongs to the CinA family. http://togogenome.org/gene/546414:DEIDE_RS05970 ^@ http://purl.uniprot.org/uniprot/C1CUR5 ^@ Similarity ^@ Belongs to the peptidase S1C family. http://togogenome.org/gene/546414:DEIDE_RS00320 ^@ http://purl.uniprot.org/uniprot/C1CXQ1 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the transketolase family.|||Binds 1 Mg(2+) ion per subunit. Can also utilize other divalent metal cations, such as Ca(2+), Mn(2+) and Co(2+).|||Binds 1 thiamine pyrophosphate per subunit.|||Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.|||Homodimer. http://togogenome.org/gene/546414:DEIDE_RS15810 ^@ http://purl.uniprot.org/uniprot/C1D371 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.|||Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS12690 ^@ http://purl.uniprot.org/uniprot/C1CZJ8 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS15530 ^@ http://purl.uniprot.org/uniprot/C1D320 ^@ Similarity ^@ Belongs to the acyl-CoA dehydrogenase family. http://togogenome.org/gene/546414:DEIDE_RS00145 ^@ http://purl.uniprot.org/uniprot/C1CXL9 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS01525 ^@ http://purl.uniprot.org/uniprot/C1CZ48 ^@ Subcellular Location Annotation ^@ Cell outer membrane|||Periplasm http://togogenome.org/gene/546414:DEIDE_RS17250 ^@ http://purl.uniprot.org/uniprot/C1D3R7 ^@ Similarity ^@ Belongs to the bacterial solute-binding protein 1 family. http://togogenome.org/gene/546414:DEIDE_RS05030 ^@ http://purl.uniprot.org/uniprot/C1D1M2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS02205 ^@ http://purl.uniprot.org/uniprot/C1CZV9 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bL34 family. http://togogenome.org/gene/546414:DEIDE_RS16970 ^@ http://purl.uniprot.org/uniprot/C1D3L2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS10965 ^@ http://purl.uniprot.org/uniprot/C1CXI7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS07870 ^@ http://purl.uniprot.org/uniprot/C1CVT1 ^@ Cofactor ^@ Binds 1 Mg(2+) or Mn(2+) ion per subunit. http://togogenome.org/gene/546414:DEIDE_RS12110 ^@ http://purl.uniprot.org/uniprot/C1CYU8 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS02220 ^@ http://purl.uniprot.org/uniprot/C1CZW2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the OXA1/ALB3/YidC family. Type 1 subfamily.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS08160 ^@ http://purl.uniprot.org/uniprot/C1CVY9 ^@ Similarity ^@ Belongs to the SIMIBI class G3E GTPase family. ArgK/MeaB subfamily. http://togogenome.org/gene/546414:DEIDE_RS05305 ^@ http://purl.uniprot.org/uniprot/C1D1S6 ^@ Similarity ^@ Belongs to the flavin oxidoreductase frp family. http://togogenome.org/gene/546414:DEIDE_RS07990 ^@ http://purl.uniprot.org/uniprot/C1CVV5 ^@ Function|||Similarity ^@ Belongs to the RecO family.|||Involved in DNA repair and RecF pathway recombination. http://togogenome.org/gene/546414:DEIDE_RS01730 ^@ http://purl.uniprot.org/uniprot/C1CZ86 ^@ Function|||Similarity ^@ Belongs to the DHNA family.|||Catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin. http://togogenome.org/gene/546414:DEIDE_RS02285 ^@ http://purl.uniprot.org/uniprot/C1CZX5 ^@ Subcellular Location Annotation ^@ Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS07855 ^@ http://purl.uniprot.org/uniprot/C1CVS8 ^@ Similarity ^@ Belongs to the FAD-dependent oxidoreductase 2 family. NadB subfamily. http://togogenome.org/gene/546414:DEIDE_RS06915 ^@ http://purl.uniprot.org/uniprot/C1CV92 ^@ Similarity ^@ Belongs to the malate synthase family. http://togogenome.org/gene/546414:DEIDE_RS04875 ^@ http://purl.uniprot.org/uniprot/C1D1J1 ^@ Similarity ^@ Belongs to the LytR/CpsA/Psr (LCP) family. http://togogenome.org/gene/546414:DEIDE_RS05515 ^@ http://purl.uniprot.org/uniprot/C1CUH3 ^@ Function|||Similarity ^@ Belongs to the PurU family.|||Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). http://togogenome.org/gene/546414:DEIDE_RS16920 ^@ http://purl.uniprot.org/uniprot/C1D3K2 ^@ Similarity ^@ Belongs to the UPF0065 (bug) family. http://togogenome.org/gene/546414:DEIDE_RS00590 ^@ http://purl.uniprot.org/uniprot/C1CY88 ^@ Similarity ^@ Belongs to the DinB family. http://togogenome.org/gene/546414:DEIDE_RS06745 ^@ http://purl.uniprot.org/uniprot/C1CV60 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the succinate/malate CoA ligase beta subunit family.|||Binds 1 Mg(2+) ion per subunit.|||Heterotetramer of two alpha and two beta subunits.|||Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. http://togogenome.org/gene/546414:DEIDE_RS05610 ^@ http://purl.uniprot.org/uniprot/C1CUJ2 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the L/F-transferase family.|||Cytoplasm|||Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. http://togogenome.org/gene/546414:DEIDE_RS16460 ^@ http://purl.uniprot.org/uniprot/C1D3B5 ^@ Similarity ^@ Belongs to the creatininase superfamily. http://togogenome.org/gene/546414:DEIDE_RS07240 ^@ http://purl.uniprot.org/uniprot/C1CVF6 ^@ Similarity ^@ Belongs to the ferredoxin--NADP reductase type 1 family. http://togogenome.org/gene/546414:DEIDE_RS13120 ^@ http://purl.uniprot.org/uniprot/C1D060 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the SurE nucleotidase family.|||Binds 1 divalent metal cation per subunit.|||Cytoplasm|||Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates. http://togogenome.org/gene/546414:DEIDE_RS05335 ^@ http://purl.uniprot.org/uniprot/C1D1T2 ^@ Similarity ^@ Belongs to the threonine aldolase family. http://togogenome.org/gene/546414:DEIDE_RS08805 ^@ http://purl.uniprot.org/uniprot/C1CWB5 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the metallo-dependent hydrolases superfamily. HutI family.|||Binds 1 zinc or iron ion per subunit.|||Catalyzes the hydrolytic cleavage of the carbon-nitrogen bond in imidazolone-5-propanoate to yield N-formimidoyl-L-glutamate. It is the third step in the universal histidine degradation pathway.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS11490 ^@ http://purl.uniprot.org/uniprot/C1CY52 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the pseudouridine-5'-phosphate glycosidase family.|||Binds 1 Mn(2+) ion per subunit.|||Catalyzes the reversible cleavage of pseudouridine 5'-phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway.|||Homotrimer. http://togogenome.org/gene/546414:DEIDE_RS17860 ^@ http://purl.uniprot.org/uniprot/C1CYG4 ^@ Similarity ^@ Belongs to the peptidase S8 family. http://togogenome.org/gene/546414:DEIDE_RS10005 ^@ http://purl.uniprot.org/uniprot/C1CWZ6 ^@ Function|||Subcellular Location Annotation ^@ Cytoplasm|||Member of the two-component regulatory system NreB/NreC involved in the control of dissimilatory nitrate/nitrite reduction in response to oxygen. NreB functions as a direct oxygen sensor histidine kinase which is autophosphorylated, in the absence of oxygen, probably at the conserved histidine residue, and transfers its phosphate group probably to a conserved aspartate residue of NreC. NreB/NreC activates the expression of the nitrate (narGHJI) and nitrite (nir) reductase operons, as well as the putative nitrate transporter gene narT. http://togogenome.org/gene/546414:DEIDE_RS04960 ^@ http://purl.uniprot.org/uniprot/C1D1K8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the GSP F family.|||Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS04490 ^@ http://purl.uniprot.org/uniprot/C1D1B5 ^@ Function|||Similarity ^@ Belongs to the iron/manganese superoxide dismutase family.|||Destroys radicals which are normally produced within the cells and which are toxic to biological systems. http://togogenome.org/gene/546414:DEIDE_RS02120 ^@ http://purl.uniprot.org/uniprot/C1CZU2 ^@ Similarity ^@ Belongs to the DEAD box helicase family. http://togogenome.org/gene/546414:DEIDE_RS10855 ^@ http://purl.uniprot.org/uniprot/C1CXG6 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL3 family.|||One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.|||Part of the 50S ribosomal subunit. Forms a cluster with proteins L14 and L19. http://togogenome.org/gene/546414:DEIDE_RS14930 ^@ http://purl.uniprot.org/uniprot/C1D2P9 ^@ Similarity ^@ Belongs to the catalase family. http://togogenome.org/gene/546414:DEIDE_RS10175 ^@ http://purl.uniprot.org/uniprot/C1CX28 ^@ Similarity ^@ Belongs to the ribF family. http://togogenome.org/gene/546414:DEIDE_RS10105 ^@ http://purl.uniprot.org/uniprot/C1CX15 ^@ Function|||Subcellular Location Annotation ^@ Cytoplasm|||Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein. http://togogenome.org/gene/546414:DEIDE_RS09350 ^@ http://purl.uniprot.org/uniprot/C1CWM2 ^@ Function|||Similarity ^@ Belongs to the RecD family. RecD-like subfamily.|||DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity. http://togogenome.org/gene/546414:DEIDE_RS07980 ^@ http://purl.uniprot.org/uniprot/C1CVV3 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the methyltransferase superfamily. PrmA family.|||Cytoplasm|||Methylates ribosomal protein L11. http://togogenome.org/gene/546414:DEIDE_RS09610 ^@ http://purl.uniprot.org/uniprot/C1CWS5 ^@ Similarity ^@ Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. http://togogenome.org/gene/546414:DEIDE_RS19720 ^@ http://purl.uniprot.org/uniprot/C1D3H2 ^@ Function|||Similarity ^@ Belongs to the NanE family.|||Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P). http://togogenome.org/gene/546414:DEIDE_RS10610 ^@ http://purl.uniprot.org/uniprot/C1CXB7 ^@ Cofactor|||Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TtcA family.|||Binds 1 [4Fe-4S] cluster per subunit. The cluster is chelated by three Cys residues, the fourth Fe has a free coordination site that may bind a sulfur atom transferred from the persulfide of IscS.|||Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.|||Cytoplasm|||Homodimer.|||The thiolation reaction likely consists of two steps: a first activation step by ATP to form an adenylated intermediate of the target base of tRNA, and a second nucleophilic substitution step of the sulfur (S) atom supplied by the hydrosulfide attached to the Fe-S cluster. http://togogenome.org/gene/546414:DEIDE_RS03665 ^@ http://purl.uniprot.org/uniprot/C1D0V3 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS00720 ^@ http://purl.uniprot.org/uniprot/C1CYB1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the UPF0410 family.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS00505 ^@ http://purl.uniprot.org/uniprot/C1CXT6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ammonia transporter channel (TC 1.A.11.2) family.|||Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS10805 ^@ http://purl.uniprot.org/uniprot/C1CXF6 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL14 family.|||Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome.|||Part of the 50S ribosomal subunit. Forms a cluster with proteins L3 and L19. In the 70S ribosome, L14 and L19 interact and together make contacts with the 16S rRNA in bridges B5 and B8. http://togogenome.org/gene/546414:DEIDE_RS06615 ^@ http://purl.uniprot.org/uniprot/C1CV34 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.|||Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp).|||Cytoplasm|||Homodimer. http://togogenome.org/gene/546414:DEIDE_RS10850 ^@ http://purl.uniprot.org/uniprot/C1CXG5 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL4 family.|||Forms part of the polypeptide exit tunnel.|||One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.|||Part of the 50S ribosomal subunit. http://togogenome.org/gene/546414:DEIDE_RS09370 ^@ http://purl.uniprot.org/uniprot/C1CWM6 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the peptidase C15 family.|||Cytoplasm|||Removes 5-oxoproline from various penultimate amino acid residues except L-proline. http://togogenome.org/gene/546414:DEIDE_RS04245 ^@ http://purl.uniprot.org/uniprot/C1D165 ^@ Similarity ^@ Belongs to the universal ribosomal protein uS9 family. http://togogenome.org/gene/546414:DEIDE_RS13160 ^@ http://purl.uniprot.org/uniprot/C1D069 ^@ Similarity ^@ Belongs to the cytidine and deoxycytidylate deaminase family. http://togogenome.org/gene/546414:DEIDE_RS03250 ^@ http://purl.uniprot.org/uniprot/C1D0N2 ^@ Similarity ^@ Belongs to the acyl-CoA dehydrogenase family. http://togogenome.org/gene/546414:DEIDE_RS01860 ^@ http://purl.uniprot.org/uniprot/C1CZB2 ^@ Function|||Subunit ^@ Acetyl-CoA carboxylase is a heterohexamer of biotin carboxyl carrier protein, biotin carboxylase and the two subunits of carboxyl transferase in a 2:2 complex.|||This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. http://togogenome.org/gene/546414:DEIDE_RS17075 ^@ http://purl.uniprot.org/uniprot/C1D3N5 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the transaldolase family. Type 1 subfamily.|||Cytoplasm|||Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. http://togogenome.org/gene/546414:DEIDE_RS14850 ^@ http://purl.uniprot.org/uniprot/C1D2N3 ^@ Function|||Similarity ^@ Belongs to the phenylacetyl-CoA ligase family.|||Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). http://togogenome.org/gene/546414:DEIDE_RS00940 ^@ http://purl.uniprot.org/uniprot/C1CYE9 ^@ Function|||Similarity|||Subunit ^@ Belongs to the DnaX/STICHEL family.|||DNA polymerase III contains a core (composed of alpha, epsilon and theta chains) that associates with a tau subunit. This core dimerizes to form the POLIII' complex. PolIII' associates with the gamma complex (composed of gamma, delta, delta', psi and chi chains) and with the beta chain to form the complete DNA polymerase III complex.|||DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. http://togogenome.org/gene/546414:DEIDE_RS13625 ^@ http://purl.uniprot.org/uniprot/C1D1Y6 ^@ Function|||Similarity ^@ Belongs to the NAD-dependent DNA ligase family. LigA subfamily.|||DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. http://togogenome.org/gene/546414:DEIDE_RS07460 ^@ http://purl.uniprot.org/uniprot/C1CVJ9 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS12150 ^@ http://purl.uniprot.org/uniprot/C1CYV5 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the methylthiotransferase family. RimO subfamily.|||Binds 2 [4Fe-4S] clusters. One cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.|||Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein uS12.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS07335 ^@ http://purl.uniprot.org/uniprot/C1CVH4 ^@ Cofactor|||Similarity ^@ Belongs to the ETF alpha-subunit/FixB family.|||Binds 1 FAD per dimer. http://togogenome.org/gene/546414:DEIDE_RS08200 ^@ http://purl.uniprot.org/uniprot/C1CVZ7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the class-I aminoacyl-tRNA synthetase family.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS11290 ^@ http://purl.uniprot.org/uniprot/C1CY14 ^@ Similarity ^@ Belongs to the UPF0173 family. http://togogenome.org/gene/546414:DEIDE_RS15680 ^@ http://purl.uniprot.org/uniprot/C1D347 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the NiCoT transporter (TC 2.A.52) family.|||Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS05450 ^@ http://purl.uniprot.org/uniprot/C1CUG0 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. MalFG subfamily.|||Cell membrane|||Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Probably responsible for the translocation of the substrate across the membrane. http://togogenome.org/gene/546414:DEIDE_RS07210 ^@ http://purl.uniprot.org/uniprot/C1CVF0 ^@ Similarity|||Subunit ^@ Belongs to the ALAD family.|||Homooctamer. http://togogenome.org/gene/546414:DEIDE_RS01060 ^@ http://purl.uniprot.org/uniprot/C1CYH2 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the pyridoxine kinase family. PdxY subfamily.|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP. http://togogenome.org/gene/546414:DEIDE_RS12545 ^@ http://purl.uniprot.org/uniprot/C1CZH0 ^@ Similarity ^@ Belongs to the IucA/IucC family. http://togogenome.org/gene/546414:DEIDE_RS07440 ^@ http://purl.uniprot.org/uniprot/C1CVJ5 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ATP phosphoribosyltransferase family. Short subfamily.|||Catalyzes the condensation of ATP and 5-phosphoribose 1-diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity.|||Cytoplasm|||Heteromultimer composed of HisG and HisZ subunits.|||Lacks the C-terminal regulatory region which is replaced by HisZ. http://togogenome.org/gene/546414:DEIDE_RS12280 ^@ http://purl.uniprot.org/uniprot/C1CYY1 ^@ Function|||Similarity ^@ Belongs to the trehalose phosphatase family.|||Removes the phosphate from trehalose 6-phosphate to produce free trehalose. http://togogenome.org/gene/546414:DEIDE_RS00485 ^@ http://purl.uniprot.org/uniprot/C1CXT2 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PTH family.|||Cytoplasm|||Monomer.|||The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. http://togogenome.org/gene/546414:DEIDE_RS06640 ^@ http://purl.uniprot.org/uniprot/C1CV39 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the CN hydrolase family. Apolipoprotein N-acyltransferase subfamily.|||Catalyzes the phospholipid dependent N-acylation of the N-terminal cysteine of apolipoprotein, the last step in lipoprotein maturation.|||Cell membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS10395 ^@ http://purl.uniprot.org/uniprot/C1CX74 ^@ Function|||Similarity ^@ Belongs to the cyclophilin-type PPIase family.|||PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. http://togogenome.org/gene/546414:DEIDE_RS10660 ^@ http://purl.uniprot.org/uniprot/C1CXC7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the MscS (TC 1.A.23) family.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS13365 ^@ http://purl.uniprot.org/uniprot/C1D0A7 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.|||Cytoplasm|||Specifically methylates the N7 position of a guanine in 16S rRNA. http://togogenome.org/gene/546414:DEIDE_RS10295 ^@ http://purl.uniprot.org/uniprot/C1CX54 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the HisA/HisF family.|||Cytoplasm|||Heterodimer of HisH and HisF.|||IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. http://togogenome.org/gene/546414:DEIDE_RS05805 ^@ http://purl.uniprot.org/uniprot/C1CUN0 ^@ Similarity ^@ Belongs to the acyl-CoA dehydrogenase family. http://togogenome.org/gene/546414:DEIDE_RS10445 ^@ http://purl.uniprot.org/uniprot/C1CX84 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS05735 ^@ http://purl.uniprot.org/uniprot/C1CUL6 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn).|||Belongs to the class-II aminoacyl-tRNA synthetase family. Type 2 subfamily.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/546414:DEIDE_RS14905 ^@ http://purl.uniprot.org/uniprot/C1D2P4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS09130 ^@ http://purl.uniprot.org/uniprot/C1CWH8 ^@ Similarity ^@ Belongs to the Nudix hydrolase family. http://togogenome.org/gene/546414:DEIDE_RS06850 ^@ http://purl.uniprot.org/uniprot/C1CV80 ^@ Activity Regulation|||Cofactor|||Function|||Similarity ^@ Allosterically activated by GTP.|||Belongs to the UPRTase family.|||Binds 1 Mg(2+) ion per subunit. The magnesium is bound as Mg-PRPP.|||Catalyzes the conversion of uracil and 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) to UMP and diphosphate. http://togogenome.org/gene/546414:DEIDE_RS02305 ^@ http://purl.uniprot.org/uniprot/C1CZX9 ^@ Caution|||Similarity ^@ Belongs to the MsrB Met sulfoxide reductase family.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS05545 ^@ http://purl.uniprot.org/uniprot/C1CUI0 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the methylthiotransferase family. MiaB subfamily.|||Binds 2 [4Fe-4S] clusters. One cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.|||Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.|||Cytoplasm|||Monomer. http://togogenome.org/gene/546414:DEIDE_RS14390 ^@ http://purl.uniprot.org/uniprot/C1D2E3 ^@ Function|||Similarity ^@ Belongs to the bacterial two-domain DSD family.|||Catalyzes the conversion of 3-dehydroshikimate to protocatechuate (3,4-dihydroxybenzoate), a common intermediate of quinate and shikimate degradation pathways. http://togogenome.org/gene/546414:DEIDE_RS10515 ^@ http://purl.uniprot.org/uniprot/C1CX98 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PanB family.|||Binds 1 Mg(2+) ion per subunit.|||Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate.|||Cytoplasm|||Homodecamer; pentamer of dimers. http://togogenome.org/gene/546414:DEIDE_RS02130 ^@ http://purl.uniprot.org/uniprot/C1CZU4 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the histidinol dehydrogenase family.|||Binds 1 zinc ion per subunit.|||Catalyzes the sequential NAD-dependent oxidations of L-histidinol to L-histidinaldehyde and then to L-histidine. http://togogenome.org/gene/546414:DEIDE_RS08050 ^@ http://purl.uniprot.org/uniprot/C1CVW7 ^@ Function|||Similarity ^@ Belongs to the APS kinase family.|||Catalyzes the synthesis of activated sulfate. http://togogenome.org/gene/546414:DEIDE_RS15790 ^@ http://purl.uniprot.org/uniprot/C1D367 ^@ Similarity ^@ Belongs to the N-acetylmuramoyl-L-alanine amidase 2 family. http://togogenome.org/gene/546414:DEIDE_RS06335 ^@ http://purl.uniprot.org/uniprot/C1CUY6 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the SecG family.|||Cell membrane|||Involved in protein export. Participates in an early event of protein translocation.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS15415 ^@ http://purl.uniprot.org/uniprot/C1D2Z7 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS00785 ^@ http://purl.uniprot.org/uniprot/C1CYC2 ^@ Similarity|||Subunit ^@ Belongs to the NAD(P)-dependent epimerase/dehydratase family.|||Homodimer. http://togogenome.org/gene/546414:DEIDE_RS07230 ^@ http://purl.uniprot.org/uniprot/C1CVF4 ^@ Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation|||Subunit ^@ A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.|||Belongs to the type II topoisomerase GyrA/ParC subunit family.|||Cytoplasm|||Few gyrases are as efficient as E.coli at forming negative supercoils. Not all organisms have 2 type II topoisomerases; in organisms with a single type II topoisomerase this enzyme also has to decatenate newly replicated chromosomes.|||Heterotetramer, composed of two GyrA and two GyrB chains. In the heterotetramer, GyrA contains the active site tyrosine that forms a transient covalent intermediate with DNA, while GyrB binds cofactors and catalyzes ATP hydrolysis. http://togogenome.org/gene/546414:DEIDE_RS15775 ^@ http://purl.uniprot.org/uniprot/C1D364 ^@ Function|||Similarity ^@ Belongs to the CobU/CobP family.|||Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate. http://togogenome.org/gene/546414:DEIDE_RS03265 ^@ http://purl.uniprot.org/uniprot/C1D0N3 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the FKBP-type PPIase family. Tig subfamily.|||Consists of 3 domains; the N-terminus binds the ribosome, the middle domain has PPIase activity, while the C-terminus has intrinsic chaperone activity on its own.|||Cytoplasm|||Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase. http://togogenome.org/gene/546414:DEIDE_RS05285 ^@ http://purl.uniprot.org/uniprot/C1D1S2 ^@ Function|||Subcellular Location Annotation|||Subunit ^@ Cytoplasm|||Heterodimer of HisH and HisF.|||IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. http://togogenome.org/gene/546414:DEIDE_RS01790 ^@ http://purl.uniprot.org/uniprot/C1CZ98 ^@ Function ^@ Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). http://togogenome.org/gene/546414:DEIDE_RS09515 ^@ http://purl.uniprot.org/uniprot/C1CWQ6 ^@ Function|||Similarity ^@ Belongs to the thymidylate kinase family.|||Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis. http://togogenome.org/gene/546414:DEIDE_RS05615 ^@ http://purl.uniprot.org/uniprot/C1CUJ3 ^@ Function|||Similarity ^@ Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.|||Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L-serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate. http://togogenome.org/gene/546414:DEIDE_RS09965 ^@ http://purl.uniprot.org/uniprot/C1CWY8 ^@ Function|||Similarity ^@ Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.|||Synthesizes alpha-1,4-glucan chains using ADP-glucose. http://togogenome.org/gene/546414:DEIDE_RS15585 ^@ http://purl.uniprot.org/uniprot/C1D330 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS04355 ^@ http://purl.uniprot.org/uniprot/C1D186 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TatA/E family.|||Cell membrane|||Forms a complex with TatC.|||Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. http://togogenome.org/gene/546414:DEIDE_RS08170 ^@ http://purl.uniprot.org/uniprot/C1CVZ1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the AIR synthase family.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS05715 ^@ http://purl.uniprot.org/uniprot/C1CUL2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS07105 ^@ http://purl.uniprot.org/uniprot/C1CVD0 ^@ Function|||Similarity ^@ Belongs to the RecN family.|||May be involved in recombinational repair of damaged DNA. http://togogenome.org/gene/546414:DEIDE_RS04390 ^@ http://purl.uniprot.org/uniprot/C1D195 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the zinc-containing alcohol dehydrogenase family.|||Binds 2 Zn(2+) ions per subunit.|||Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate.|||Cytoplasm|||Homotetramer. http://togogenome.org/gene/546414:DEIDE_RS12915 ^@ http://purl.uniprot.org/uniprot/C1CZP1 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the chaperonin (HSP60) family.|||Cytoplasm|||Forms a cylinder of 14 subunits composed of two heptameric rings stacked back-to-back. Interacts with the co-chaperonin GroES.|||Together with its co-chaperonin GroES, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding. http://togogenome.org/gene/546414:DEIDE_RS16700 ^@ http://purl.uniprot.org/uniprot/C1D3G1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/546414:DEIDE_RS10000 ^@ http://purl.uniprot.org/uniprot/C1CWZ5 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.|||Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/546414:DEIDE_RS05670 ^@ http://purl.uniprot.org/uniprot/C1CUK3 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS05280 ^@ http://purl.uniprot.org/uniprot/C1D1S1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the imidazoleglycerol-phosphate dehydratase family.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS11015 ^@ http://purl.uniprot.org/uniprot/C1CXV8 ^@ Similarity ^@ Belongs to the peptidase S58 family. http://togogenome.org/gene/546414:DEIDE_RS12415 ^@ http://purl.uniprot.org/uniprot/C1CZE2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS15470 ^@ http://purl.uniprot.org/uniprot/C1D308 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the glycosyl hydrolase 13 family.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS12260 ^@ http://purl.uniprot.org/uniprot/C1CYX7 ^@ Cofactor|||Function|||Similarity ^@ Binds 1 Mg(2+) ion per subunit.|||Binds 1 [4Fe-4S] cluster per subunit.|||Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.|||In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. http://togogenome.org/gene/546414:DEIDE_RS01285 ^@ http://purl.uniprot.org/uniprot/C1CZ00 ^@ Caution|||Domain|||Function|||Similarity|||Subcellular Location Annotation ^@ 2 residues (Tyr-66 and Arg-69) present in a large hydrophobic pocket are probably involved in substrate specificity. They are important for desuccinylation activity, but dispensable for deacetylation activity.|||Belongs to the sirtuin family. Class III subfamily.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form. http://togogenome.org/gene/546414:DEIDE_RS14350 ^@ http://purl.uniprot.org/uniprot/C1D2D5 ^@ Similarity ^@ Belongs to the class-II fumarase/aspartase family. http://togogenome.org/gene/546414:DEIDE_RS10640 ^@ http://purl.uniprot.org/uniprot/C1CXC3 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the metal hydrolase YfiT family.|||Binds 1 zinc ion per subunit.|||Cytoplasm|||Homodimer.|||Possible metal-dependent hydrolase. http://togogenome.org/gene/546414:DEIDE_RS14925 ^@ http://purl.uniprot.org/uniprot/C1D2P8 ^@ Function|||Miscellaneous|||Similarity|||Subunit ^@ A lyase-type mechanism (elimination/hydration) is suggested for the cleavage of the lactyl ether bond of MurNAc 6-phosphate, with the formation of an alpha,beta-unsaturated aldehyde intermediate with (E)-stereochemistry, followed by the syn addition of water to give product.|||Belongs to the GCKR-like family. MurNAc-6-P etherase subfamily.|||Homodimer.|||Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D-lactate. http://togogenome.org/gene/546414:DEIDE_RS12775 ^@ http://purl.uniprot.org/uniprot/C1CZL5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the NlpA lipoprotein family.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS10960 ^@ http://purl.uniprot.org/uniprot/C1CXI6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS15285 ^@ http://purl.uniprot.org/uniprot/C1D2X1 ^@ Similarity ^@ Belongs to the peptidase S33 family. http://togogenome.org/gene/546414:DEIDE_RS03600 ^@ http://purl.uniprot.org/uniprot/C1D0U1 ^@ Activity Regulation|||Caution|||Function|||Similarity|||Subunit ^@ Belongs to the IMPDH/GMPR family.|||Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.|||Homotetramer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Mycophenolic acid (MPA) is a non-competitive inhibitor that prevents formation of the closed enzyme conformation by binding to the same site as the amobile flap. In contrast, mizoribine monophosphate (MZP) is a competitive inhibitor that induces the closed conformation. MPA is a potent inhibitor of mammalian IMPDHs but a poor inhibitor of the bacterial enzymes. MZP is a more potent inhibitor of bacterial IMPDH. http://togogenome.org/gene/546414:DEIDE_RS01245 ^@ http://purl.uniprot.org/uniprot/C1CYK8 ^@ Similarity ^@ Belongs to the DinB family. http://togogenome.org/gene/546414:DEIDE_RS12060 ^@ http://purl.uniprot.org/uniprot/C1CYT8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the SHMT family.|||Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/546414:DEIDE_RS02690 ^@ http://purl.uniprot.org/uniprot/C1D0C7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS12620 ^@ http://purl.uniprot.org/uniprot/C1CZI4 ^@ Similarity ^@ Belongs to the peptidase S8 family. http://togogenome.org/gene/546414:DEIDE_RS09980 ^@ http://purl.uniprot.org/uniprot/C1CWZ1 ^@ Similarity ^@ Belongs to the extradiol ring-cleavage dioxygenase family. http://togogenome.org/gene/546414:DEIDE_RS00520 ^@ http://purl.uniprot.org/uniprot/C1CXT9 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS11680 ^@ http://purl.uniprot.org/uniprot/C1CYL6 ^@ Function|||Similarity ^@ Belongs to the glucose-1-phosphate thymidylyltransferase family.|||Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. http://togogenome.org/gene/546414:DEIDE_RS01250 ^@ http://purl.uniprot.org/uniprot/C1CYK9 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the MscL family.|||Cell membrane|||Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.|||Homopentamer.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS10835 ^@ http://purl.uniprot.org/uniprot/C1CXG2 ^@ Function|||Similarity ^@ Belongs to the universal ribosomal protein uS19 family.|||Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. http://togogenome.org/gene/546414:DEIDE_RS05295 ^@ http://purl.uniprot.org/uniprot/C1D1S4 ^@ Function|||Similarity|||Subunit ^@ Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.|||Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.|||Monomer. http://togogenome.org/gene/546414:DEIDE_RS01985 ^@ http://purl.uniprot.org/uniprot/C1CZR8 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the sigma-70 factor family. RpoD/SigA subfamily.|||Cytoplasm|||Interacts transiently with the RNA polymerase catalytic core.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. http://togogenome.org/gene/546414:DEIDE_RS10700 ^@ http://purl.uniprot.org/uniprot/C1CXD5 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS4 family.|||One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.|||Part of the 30S ribosomal subunit. Contacts protein S5. The interaction surface between S4 and S5 is involved in control of translational fidelity.|||With S5 and S12 plays an important role in translational accuracy. http://togogenome.org/gene/546414:DEIDE_RS12045 ^@ http://purl.uniprot.org/uniprot/C1CYT5 ^@ Cofactor|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.|||Binds 2 magnesium ions per tetramer.|||Cytoplasm|||Tetramer of two alpha and two beta subunits. http://togogenome.org/gene/546414:DEIDE_RS19725 ^@ http://purl.uniprot.org/uniprot/C1D3H3 ^@ Similarity ^@ Belongs to the DapA family. http://togogenome.org/gene/546414:DEIDE_RS15915 ^@ http://purl.uniprot.org/uniprot/C1D392 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.|||Cell membrane|||Membrane|||Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane. http://togogenome.org/gene/546414:DEIDE_RS15560 ^@ http://purl.uniprot.org/uniprot/C1D325 ^@ Function|||Similarity|||Subunit ^@ Belongs to the kynureninase family.|||Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3-hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3-hydroxyanthranilic acid (3-OHAA), respectively.|||Homodimer. http://togogenome.org/gene/546414:DEIDE_RS16880 ^@ http://purl.uniprot.org/uniprot/C1D3J4 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS01940 ^@ http://purl.uniprot.org/uniprot/C1CZC6 ^@ Similarity ^@ Belongs to the UPF0111 family. http://togogenome.org/gene/546414:DEIDE_RS07715 ^@ http://purl.uniprot.org/uniprot/C1CVP9 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS16975 ^@ http://purl.uniprot.org/uniprot/C1D3L3 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS00990 ^@ http://purl.uniprot.org/uniprot/C1CYF9 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Acetyl-CoA carboxylase is a heterohexamer composed of biotin carboxyl carrier protein (AccB), biotin carboxylase (AccC) and two subunits each of ACCase subunit alpha (AccA) and ACCase subunit beta (AccD).|||Belongs to the AccD/PCCB family.|||Binds 1 zinc ion per subunit.|||Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS11360 ^@ http://purl.uniprot.org/uniprot/C1CY28 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PhoU family.|||Cytoplasm|||Homodimer.|||Plays a role in the regulation of phosphate uptake. http://togogenome.org/gene/546414:DEIDE_RS03180 ^@ http://purl.uniprot.org/uniprot/C1D0M2 ^@ Function|||Subunit ^@ Catalyzes the synthesis of GMP from XMP.|||Homodimer. http://togogenome.org/gene/546414:DEIDE_RS01420 ^@ http://purl.uniprot.org/uniprot/C1CZ29 ^@ Function|||Similarity|||Subunit ^@ Belongs to the RNA polymerase subunit omega family.|||Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.|||The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription. http://togogenome.org/gene/546414:DEIDE_RS06785 ^@ http://purl.uniprot.org/uniprot/C1CV67 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily.|||Binds 1 zinc ion per subunit.|||Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon. http://togogenome.org/gene/546414:DEIDE_RS03510 ^@ http://purl.uniprot.org/uniprot/C1D0S7 ^@ Function|||Similarity ^@ Belongs to the NusG family.|||Participates in transcription elongation, termination and antitermination. http://togogenome.org/gene/546414:DEIDE_RS12720 ^@ http://purl.uniprot.org/uniprot/C1CZK4 ^@ Similarity ^@ Belongs to the peptidase S8 family. http://togogenome.org/gene/546414:DEIDE_RS04320 ^@ http://purl.uniprot.org/uniprot/C1D179 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the RNase H family.|||Binds 1 Mg(2+) ion per subunit. May bind a second metal ion at a regulatory site, or after substrate binding.|||Cytoplasm|||Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.|||Monomer. http://togogenome.org/gene/546414:DEIDE_RS11885 ^@ http://purl.uniprot.org/uniprot/C1CYQ3 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the RuvC family.|||Binds 2 Mg(2+) ion per subunit.|||Cytoplasm|||Homodimer which binds Holliday junction (HJ) DNA. The HJ becomes 2-fold symmetrical on binding to RuvC with unstacked arms; it has a different conformation from HJ DNA in complex with RuvA. In the full resolvosome a probable DNA-RuvA(4)-RuvB(12)-RuvC(2) complex forms which resolves the HJ.|||The RuvA-RuvB-RuvC complex processes Holliday junction (HJ) DNA during genetic recombination and DNA repair. Endonuclease that resolves HJ intermediates. Cleaves cruciform DNA by making single-stranded nicks across the HJ at symmetrical positions within the homologous arms, yielding a 5'-phosphate and a 3'-hydroxyl group; requires a central core of homology in the junction. The consensus cleavage sequence is 5'-(A/T)TT(C/G)-3'. Cleavage occurs on the 3'-side of the TT dinucleotide at the point of strand exchange. HJ branch migration catalyzed by RuvA-RuvB allows RuvC to scan DNA until it finds its consensus sequence, where it cleaves and resolves the cruciform DNA. http://togogenome.org/gene/546414:DEIDE_RS09985 ^@ http://purl.uniprot.org/uniprot/C1CWZ2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS10545 ^@ http://purl.uniprot.org/uniprot/C1CXA4 ^@ Similarity ^@ Belongs to the SCO1/2 family. http://togogenome.org/gene/546414:DEIDE_RS08945 ^@ http://purl.uniprot.org/uniprot/C1CWE5 ^@ Similarity ^@ Belongs to the type II topoisomerase GyrB family. http://togogenome.org/gene/546414:DEIDE_RS03495 ^@ http://purl.uniprot.org/uniprot/C1D0S4 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL10 family.|||Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.|||Part of the ribosomal stalk of the 50S ribosomal subunit. The N-terminus interacts with L11 and the large rRNA to form the base of the stalk. The C-terminus forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex. http://togogenome.org/gene/546414:DEIDE_RS01840 ^@ http://purl.uniprot.org/uniprot/C1CZA8 ^@ Cofactor|||Similarity ^@ Belongs to the DNA repair enzymes AP/ExoA family.|||Probably binds two magnesium or manganese ions per subunit. http://togogenome.org/gene/546414:DEIDE_RS14560 ^@ http://purl.uniprot.org/uniprot/C1D2H7 ^@ Function|||Similarity ^@ Belongs to the mannonate dehydratase family.|||Catalyzes the dehydration of D-mannonate. http://togogenome.org/gene/546414:DEIDE_RS01935 ^@ http://purl.uniprot.org/uniprot/C1CZC5 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS06150 ^@ http://purl.uniprot.org/uniprot/C1CUV0 ^@ Cofactor|||Similarity|||Subcellular Location Annotation ^@ Belongs to the bacterial diacylglycerol kinase family.|||Membrane|||Mn(2+), Zn(2+), Cd(2+) and Co(2+) support activity to lesser extents. http://togogenome.org/gene/546414:DEIDE_RS17935 ^@ http://purl.uniprot.org/uniprot/C1D0Y7 ^@ Subcellular Location Annotation ^@ Cell outer membrane|||Periplasm http://togogenome.org/gene/546414:DEIDE_RS12315 ^@ http://purl.uniprot.org/uniprot/C1CYZ0 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the 2-oxoacid dehydrogenase family.|||Binds 1 lipoyl cofactor covalently.|||E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2-oxoglutarate to succinyl-CoA and CO(2). http://togogenome.org/gene/546414:DEIDE_RS04110 ^@ http://purl.uniprot.org/uniprot/C1D139 ^@ Caution|||Similarity|||Subcellular Location Annotation ^@ Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS17845 ^@ http://purl.uniprot.org/uniprot/C1CXN9 ^@ Similarity ^@ Belongs to the glycosyl hydrolase 26 family. http://togogenome.org/gene/546414:DEIDE_RS01395 ^@ http://purl.uniprot.org/uniprot/C1CZ24 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/546414:DEIDE_RS10370 ^@ http://purl.uniprot.org/uniprot/C1CX69 ^@ Similarity ^@ Belongs to the peptidase C40 family. http://togogenome.org/gene/546414:DEIDE_RS08815 ^@ http://purl.uniprot.org/uniprot/C1CWB7 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the urocanase family.|||Binds 1 NAD(+) per subunit.|||Catalyzes the conversion of urocanate to 4-imidazolone-5-propionate.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS03110 ^@ http://purl.uniprot.org/uniprot/C1D0K8 ^@ Caution|||Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.|||Binds 1 potassium ion per subunit.|||Cytoplasm|||Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.|||Homodimer. Heterotetramer of two MnmE and two MnmG subunits.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS10155 ^@ http://purl.uniprot.org/uniprot/C1CX25 ^@ Function|||Similarity|||Subunit ^@ Belongs to the type-II 3-dehydroquinase family.|||Catalyzes a trans-dehydration via an enolate intermediate.|||Homododecamer. http://togogenome.org/gene/546414:DEIDE_RS03155 ^@ http://purl.uniprot.org/uniprot/C1D0L7 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS13145 ^@ http://purl.uniprot.org/uniprot/C1D066 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS09485 ^@ http://purl.uniprot.org/uniprot/C1CWQ0 ^@ Caution|||Function|||Similarity ^@ Belongs to the glucose-6-phosphate dehydrogenase family.|||Catalyzes the oxidation of glucose 6-phosphate to 6-phosphogluconolactone.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS01750 ^@ http://purl.uniprot.org/uniprot/C1CZ90 ^@ Similarity ^@ Belongs to the UPF0102 family. http://togogenome.org/gene/546414:DEIDE_RS10885 ^@ http://purl.uniprot.org/uniprot/C1CXH2 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS12 family.|||Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.|||Part of the 30S ribosomal subunit. Contacts proteins S8 and S17. May interact with IF1 in the 30S initiation complex.|||With S4 and S5 plays an important role in translational accuracy. http://togogenome.org/gene/546414:DEIDE_RS05690 ^@ http://purl.uniprot.org/uniprot/C1CUK7 ^@ Subcellular Location Annotation ^@ Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS02365 ^@ http://purl.uniprot.org/uniprot/C1CZZ1 ^@ Function|||Similarity ^@ Belongs to the transglycosylase MltG family.|||Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. http://togogenome.org/gene/546414:DEIDE_RS05495 ^@ http://purl.uniprot.org/uniprot/C1CUG9 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.|||Cytoplasm|||Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. http://togogenome.org/gene/546414:DEIDE_RS04265 ^@ http://purl.uniprot.org/uniprot/C1D169 ^@ Similarity ^@ Belongs to the glycosyl hydrolase 13 family. TreS subfamily. http://togogenome.org/gene/546414:DEIDE_RS14550 ^@ http://purl.uniprot.org/uniprot/C1D2H5 ^@ Similarity ^@ Belongs to the KHG/KDPG aldolase family. http://togogenome.org/gene/546414:DEIDE_RS13280 ^@ http://purl.uniprot.org/uniprot/C1D091 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS03035 ^@ http://purl.uniprot.org/uniprot/C1D0J5 ^@ Similarity ^@ Belongs to the glycosyl hydrolase 26 family. http://togogenome.org/gene/546414:DEIDE_RS06255 ^@ http://purl.uniprot.org/uniprot/C1CUX0 ^@ Function|||Similarity|||Subunit ^@ Belongs to the ribose 5-phosphate isomerase family.|||Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.|||Homodimer. http://togogenome.org/gene/546414:DEIDE_RS06665 ^@ http://purl.uniprot.org/uniprot/C1CV44 ^@ Similarity ^@ Belongs to the peptidase C40 family. http://togogenome.org/gene/546414:DEIDE_RS11720 ^@ http://purl.uniprot.org/uniprot/C1CYM4 ^@ Cofactor|||Function|||PTM|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the MsrP family.|||Binds 1 Mo-molybdopterin (Mo-MPT) cofactor per subunit.|||Cell envelope|||Heterodimer of a catalytic subunit (MsrP) and a heme-binding subunit (MsrQ).|||Part of the MsrPQ system that repairs oxidized cell envelope proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated cell envelope proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide.|||Predicted to be exported by the Tat system. The position of the signal peptide cleavage has not been experimentally proven. http://togogenome.org/gene/546414:DEIDE_RS17350 ^@ http://purl.uniprot.org/uniprot/C1D3T7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/546414:DEIDE_RS03695 ^@ http://purl.uniprot.org/uniprot/C1D0V9 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the IF-3 family.|||Cytoplasm|||IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.|||Monomer. http://togogenome.org/gene/546414:DEIDE_RS07145 ^@ http://purl.uniprot.org/uniprot/C1CVD7 ^@ Similarity ^@ In the C-terminal section; belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. http://togogenome.org/gene/546414:DEIDE_RS04250 ^@ http://purl.uniprot.org/uniprot/C1D166 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL13 family.|||Part of the 50S ribosomal subunit.|||This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. http://togogenome.org/gene/546414:DEIDE_RS12600 ^@ http://purl.uniprot.org/uniprot/C1CZI0 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the GrpE family.|||Cytoplasm|||Homodimer.|||Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. http://togogenome.org/gene/546414:DEIDE_RS11520 ^@ http://purl.uniprot.org/uniprot/C1CY58 ^@ Similarity ^@ Belongs to the RutC family. http://togogenome.org/gene/546414:DEIDE_RS02900 ^@ http://purl.uniprot.org/uniprot/C1D0G8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/546414:DEIDE_RS12460 ^@ http://purl.uniprot.org/uniprot/C1CZF1 ^@ Similarity ^@ Belongs to the peptidase S66 family. http://togogenome.org/gene/546414:DEIDE_RS07735 ^@ http://purl.uniprot.org/uniprot/C1CVQ3 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the glutamate 5-kinase family.|||Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS11220 ^@ http://purl.uniprot.org/uniprot/C1CY01 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.|||Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. Bacterial RNase J subfamily.|||Cytoplasm|||Homodimer, may be a subunit of the RNA degradosome. http://togogenome.org/gene/546414:DEIDE_RS01795 ^@ http://purl.uniprot.org/uniprot/C1CZ99 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the 2-oxoacid dehydrogenase family.|||Binds 2 lipoyl cofactors covalently.|||Forms a 24-polypeptide structural core with octahedral symmetry.|||The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). http://togogenome.org/gene/546414:DEIDE_RS13255 ^@ http://purl.uniprot.org/uniprot/C1D086 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the TsaE family.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS15095 ^@ http://purl.uniprot.org/uniprot/C1D2T3 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS13000 ^@ http://purl.uniprot.org/uniprot/C1CZQ8 ^@ Function|||Similarity ^@ Belongs to the class I-like SAM-binding methyltransferase superfamily. MenG/UbiE family.|||Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). http://togogenome.org/gene/546414:DEIDE_RS04780 ^@ http://purl.uniprot.org/uniprot/C1D1H2 ^@ Function|||Similarity ^@ Belongs to the CcmH/CycL/Ccl2/NrfF family.|||Possible subunit of a heme lyase. http://togogenome.org/gene/546414:DEIDE_RS13775 ^@ http://purl.uniprot.org/uniprot/C1D217 ^@ Similarity ^@ Belongs to the glycosyl hydrolase 38 family. http://togogenome.org/gene/546414:DEIDE_RS00015 ^@ http://purl.uniprot.org/uniprot/C1CXJ2 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the beta sliding clamp family.|||Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication as well as for processivity of DNA replication.|||Cytoplasm|||Forms a ring-shaped head-to-tail homodimer around DNA. http://togogenome.org/gene/546414:DEIDE_RS01290 ^@ http://purl.uniprot.org/uniprot/C1CZ01 ^@ Function|||Similarity ^@ Belongs to the KptA/TPT1 family.|||Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''-cyclic phosphate (APPR>P). May function as an ADP-ribosylase. http://togogenome.org/gene/546414:DEIDE_RS03515 ^@ http://purl.uniprot.org/uniprot/C1D0S8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the SecE/SEC61-gamma family.|||Cell membrane|||Component of the Sec protein translocase complex. Heterotrimer consisting of SecY, SecE and SecG subunits. The heterotrimers can form oligomers, although 1 heterotrimer is thought to be able to translocate proteins. Interacts with the ribosome. Interacts with SecDF, and other proteins may be involved. Interacts with SecA.|||Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. http://togogenome.org/gene/546414:DEIDE_RS10635 ^@ http://purl.uniprot.org/uniprot/C1CXC2 ^@ Similarity ^@ Belongs to the Nudix hydrolase family. http://togogenome.org/gene/546414:DEIDE_RS01345 ^@ http://purl.uniprot.org/uniprot/C1CZ13 ^@ Similarity ^@ Belongs to the fatty acid desaturase type 2 family. http://togogenome.org/gene/546414:DEIDE_RS12120 ^@ http://purl.uniprot.org/uniprot/C1CYV0 ^@ Similarity ^@ Belongs to the shaker potassium channel beta subunit family. http://togogenome.org/gene/546414:DEIDE_RS02890 ^@ http://purl.uniprot.org/uniprot/C1D0G6 ^@ Similarity ^@ Belongs to the ROK (NagC/XylR) family. http://togogenome.org/gene/546414:DEIDE_RS04430 ^@ http://purl.uniprot.org/uniprot/C1D1A3 ^@ Similarity ^@ Belongs to the GSP E family. http://togogenome.org/gene/546414:DEIDE_RS08055 ^@ http://purl.uniprot.org/uniprot/C1CVW8 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the PAPS reductase family. CysH subfamily.|||Binds 1 [4Fe-4S] cluster per subunit.|||Catalyzes the formation of sulfite from adenosine 5'-phosphosulfate (APS) using thioredoxin as an electron donor.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS15920 ^@ http://purl.uniprot.org/uniprot/C1D393 ^@ Similarity ^@ Belongs to the bacterial solute-binding protein ModA family. http://togogenome.org/gene/546414:DEIDE_RS03885 ^@ http://purl.uniprot.org/uniprot/C1D0Z6 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the thymidine kinase family.|||Cytoplasm|||Homotetramer. http://togogenome.org/gene/546414:DEIDE_RS00150 ^@ http://purl.uniprot.org/uniprot/C1CXM0 ^@ Cofactor|||Similarity ^@ Belongs to the peptidase S45 family.|||Binds 1 Ca(2+) ion per dimer. http://togogenome.org/gene/546414:DEIDE_RS03160 ^@ http://purl.uniprot.org/uniprot/C1D0L8 ^@ Function|||Similarity ^@ ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.|||Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. YchF/OLA1 subfamily. http://togogenome.org/gene/546414:DEIDE_RS09855 ^@ http://purl.uniprot.org/uniprot/C1CWW9 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the HPF/YfiA ribosome-associated protein family. Long HPF subfamily.|||Cytoplasm|||Interacts with 100S ribosomes.|||Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. http://togogenome.org/gene/546414:DEIDE_RS08300 ^@ http://purl.uniprot.org/uniprot/C1CW16 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/546414:DEIDE_RS02295 ^@ http://purl.uniprot.org/uniprot/C1CZX7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the purine/pyrimidine phosphoribosyltransferase family. Xpt subfamily.|||Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/546414:DEIDE_RS11315 ^@ http://purl.uniprot.org/uniprot/C1CY19 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the Iojap/RsfS family.|||Cytoplasm|||Functions as a ribosomal silencing factor. Interacts with ribosomal protein uL14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.|||Interacts with ribosomal protein uL14 (rplN). http://togogenome.org/gene/546414:DEIDE_RS19705 ^@ http://purl.uniprot.org/uniprot/C1D4A9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/546414:DEIDE_RS16365 ^@ http://purl.uniprot.org/uniprot/C1D489 ^@ Similarity ^@ Belongs to the 5'-nucleotidase family.|||Belongs to the CapA family. http://togogenome.org/gene/546414:DEIDE_RS00360 ^@ http://purl.uniprot.org/uniprot/C1CXQ9 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the DtxR/MntR family.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/546414:DEIDE_RS16335 ^@ http://purl.uniprot.org/uniprot/C1D483 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS10510 ^@ http://purl.uniprot.org/uniprot/C1CX97 ^@ Similarity ^@ Belongs to the Glu/Leu/Phe/Val dehydrogenases family. http://togogenome.org/gene/546414:DEIDE_RS12715 ^@ http://purl.uniprot.org/uniprot/C1CZK3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the cytidylate kinase family. Type 1 subfamily.|||Cytoplasm http://togogenome.org/gene/546414:DEIDE_RS06690 ^@ http://purl.uniprot.org/uniprot/C1CV49 ^@ Function|||Similarity|||Subunit ^@ Belongs to the glutaminase PdxT/SNO family.|||Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.|||In the presence of PdxS, forms a dodecamer of heterodimers. Only shows activity in the heterodimer. http://togogenome.org/gene/546414:DEIDE_RS15705 ^@ http://purl.uniprot.org/uniprot/C1D352 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the CobD/CbiB family.|||Cell membrane|||Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS12135 ^@ http://purl.uniprot.org/uniprot/C1CYV2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS05075 ^@ http://purl.uniprot.org/uniprot/C1D1N1 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the SMC family.|||Contains large globular domains required for ATP hydrolysis at each terminus and a third globular domain forming a flexible hinge near the middle of the molecule. These domains are separated by coiled-coil structures.|||Cytoplasm|||Homodimer.|||Required for chromosome condensation and partitioning. http://togogenome.org/gene/546414:DEIDE_RS04045 ^@ http://purl.uniprot.org/uniprot/C1D126 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site.|||Cytoplasm|||In the C-terminal section; belongs to the helicase family. RecG subfamily.|||In the N-terminal section; belongs to the UvrB family. http://togogenome.org/gene/546414:DEIDE_RS06595 ^@ http://purl.uniprot.org/uniprot/C1CV31 ^@ Similarity ^@ Belongs to the aspartokinase family. http://togogenome.org/gene/546414:DEIDE_RS08410 ^@ http://purl.uniprot.org/uniprot/C1CW38 ^@ Similarity ^@ Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. http://togogenome.org/gene/546414:DEIDE_RS04510 ^@ http://purl.uniprot.org/uniprot/C1D1B9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the autoinducer-2 exporter (AI-2E) (TC 2.A.86) family.|||Membrane http://togogenome.org/gene/546414:DEIDE_RS04080 ^@ http://purl.uniprot.org/uniprot/C1D133 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS03350 ^@ http://purl.uniprot.org/uniprot/C1D0P9 ^@ Function|||Similarity ^@ Belongs to the MoeA family.|||Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. http://togogenome.org/gene/546414:DEIDE_RS04085 ^@ http://purl.uniprot.org/uniprot/C1D134 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS04690 ^@ http://purl.uniprot.org/uniprot/C1D1F5 ^@ Similarity ^@ Belongs to the ComB family. http://togogenome.org/gene/546414:DEIDE_RS05195 ^@ http://purl.uniprot.org/uniprot/C1D1Q5 ^@ Similarity ^@ Belongs to the radical SAM superfamily. KamA family. http://togogenome.org/gene/546414:DEIDE_RS17145 ^@ http://purl.uniprot.org/uniprot/C1D3P7 ^@ Similarity ^@ Belongs to the ROK (NagC/XylR) family. http://togogenome.org/gene/546414:DEIDE_RS11260 ^@ http://purl.uniprot.org/uniprot/C1CY08 ^@ Similarity ^@ Belongs to the purine nucleoside phosphorylase YfiH/LACC1 family. http://togogenome.org/gene/546414:DEIDE_RS10630 ^@ http://purl.uniprot.org/uniprot/C1CXC1 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.|||Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family.|||Cell membrane|||Cytoplasm|||Monomer. http://togogenome.org/gene/546414:DEIDE_RS17100 ^@ http://purl.uniprot.org/uniprot/C1D3P0 ^@ Similarity ^@ Belongs to the peptidase S33 family. http://togogenome.org/gene/546414:DEIDE_RS00760 ^@ http://purl.uniprot.org/uniprot/C1CYB7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the auxin efflux carrier (TC 2.A.69) family.|||Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS11960 ^@ http://purl.uniprot.org/uniprot/C1CYR7 ^@ Subcellular Location Annotation ^@ Cell inner membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS07670 ^@ http://purl.uniprot.org/uniprot/C1CVP0 ^@ Activity Regulation|||Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the UMP kinase family.|||Catalyzes the reversible phosphorylation of UMP to UDP.|||Cytoplasm|||Homohexamer.|||Inhibited by UTP.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/546414:DEIDE_RS07790 ^@ http://purl.uniprot.org/uniprot/C1CVR5 ^@ Similarity ^@ Belongs to the RimK family. LysX subfamily. http://togogenome.org/gene/546414:DEIDE_RS16565 ^@ http://purl.uniprot.org/uniprot/C1D3D5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/546414:DEIDE_RS03415 ^@ http://purl.uniprot.org/uniprot/C1D0Q8 ^@ Function|||Similarity ^@ Belongs to the bacterial ribosomal protein bL20 family.|||Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. http://togogenome.org/gene/546414:DEIDE_RS02830 ^@ http://purl.uniprot.org/uniprot/C1D0F4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the UPF0702 family.|||Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS06845 ^@ http://purl.uniprot.org/uniprot/C1CV79 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/546414:DEIDE_RS11880 ^@ http://purl.uniprot.org/uniprot/C1CYQ2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the protease PrsW family.|||Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS07950 ^@ http://purl.uniprot.org/uniprot/C1CVU7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the GTP-binding SRP family. FtsY subfamily.|||Cell membrane|||Cytoplasm|||Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).|||Membrane|||Part of the signal recognition particle protein translocation system, which is composed of SRP and FtsY. http://togogenome.org/gene/546414:DEIDE_RS16080 ^@ http://purl.uniprot.org/uniprot/C1D433 ^@ Similarity ^@ Belongs to the DapA family. http://togogenome.org/gene/546414:DEIDE_RS10505 ^@ http://purl.uniprot.org/uniprot/C1CX96 ^@ Similarity ^@ Belongs to the Glu/Leu/Phe/Val dehydrogenases family. http://togogenome.org/gene/546414:DEIDE_RS03615 ^@ http://purl.uniprot.org/uniprot/C1D0U4 ^@ Similarity ^@ Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. http://togogenome.org/gene/546414:DEIDE_RS07360 ^@ http://purl.uniprot.org/uniprot/C1CVH9 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ABC transporter superfamily. UvrA family.|||Cytoplasm|||Forms a heterotetramer with UvrB during the search for lesions.|||The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. http://togogenome.org/gene/546414:DEIDE_RS02945 ^@ http://purl.uniprot.org/uniprot/C1D0H7 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the complex I 75 kDa subunit family.|||Binds 1 [2Fe-2S] cluster per subunit.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/546414:DEIDE_RS12440 ^@ http://purl.uniprot.org/uniprot/C1CZE7 ^@ Similarity ^@ Belongs to the peptidase S8 family. http://togogenome.org/gene/546414:DEIDE_RS19740 ^@ http://purl.uniprot.org/uniprot/C1D187 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TatA/E family.|||Cell membrane|||Forms a complex with TatC.|||Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. http://togogenome.org/gene/546414:DEIDE_RS12360 ^@ http://purl.uniprot.org/uniprot/C1CZD1 ^@ Similarity ^@ Belongs to the trans-sulfuration enzymes family. http://togogenome.org/gene/546414:DEIDE_RS14900 ^@ http://purl.uniprot.org/uniprot/C1D2P3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/546414:DEIDE_RS08295 ^@ http://purl.uniprot.org/uniprot/C1CW15 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/546414:DEIDE_RS10915 ^@ http://purl.uniprot.org/uniprot/C1CXH6 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.|||Cytoplasm|||GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.|||Monomer. Associates with the 50S ribosomal subunit. http://togogenome.org/gene/546414:DEIDE_RS00535 ^@ http://purl.uniprot.org/uniprot/C1CXU2 ^@ Similarity ^@ Belongs to the V-ATPase F subunit family. http://togogenome.org/gene/546414:DEIDE_RS09480 ^@ http://purl.uniprot.org/uniprot/C1CWP9 ^@ Similarity ^@ Belongs to the 6-phosphogluconate dehydrogenase family. http://togogenome.org/gene/546414:DEIDE_RS01640 ^@ http://purl.uniprot.org/uniprot/C1CZ69 ^@ Function|||Similarity|||Subunit ^@ Belongs to the PurK/PurT family.|||Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).|||Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)- to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).|||Homodimer. http://togogenome.org/gene/546414:DEIDE_RS08015 ^@ http://purl.uniprot.org/uniprot/C1CVW0 ^@ Similarity ^@ Belongs to the aldehyde dehydrogenase family. http://togogenome.org/gene/546414:DEIDE_RS07315 ^@ http://purl.uniprot.org/uniprot/C1CVH0 ^@ Similarity ^@ Belongs to the ClpA/ClpB family. http://togogenome.org/gene/546414:DEIDE_RS10720 ^@ http://purl.uniprot.org/uniprot/C1CXD9 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the IF-1 family.|||Component of the 30S ribosomal translation pre-initiation complex which assembles on the 30S ribosome in the order IF-2 and IF-3, IF-1 and N-formylmethionyl-tRNA(fMet); mRNA recruitment can occur at any time during PIC assembly.|||Cytoplasm|||One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. http://togogenome.org/gene/546414:DEIDE_RS09655 ^@ http://purl.uniprot.org/uniprot/C1CWT4 ^@ Similarity ^@ Belongs to the DEAD box helicase family. DDX21/DDX50 subfamily.