http://togogenome.org/gene/765911:THIVI_RS21190 ^@ http://purl.uniprot.org/uniprot/I3YGS3 ^@ Similarity ^@ Belongs to the ner transcriptional regulatory family. http://togogenome.org/gene/765911:THIVI_RS09050 ^@ http://purl.uniprot.org/uniprot/I3YA19 ^@ Function|||Similarity ^@ Belongs to the iron/manganese superoxide dismutase family.|||Destroys radicals which are normally produced within the cells and which are toxic to biological systems. http://togogenome.org/gene/765911:THIVI_RS06815 ^@ http://purl.uniprot.org/uniprot/I3Y8U6 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Alpha(8)-beta(8). The alpha component is a flavoprotein, the beta component is a hemoprotein.|||Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.|||Binds 1 [4Fe-4S] cluster per subunit.|||Binds 1 siroheme per subunit.|||Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. http://togogenome.org/gene/765911:THIVI_RS05545 ^@ http://purl.uniprot.org/uniprot/I3Y850 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the CDP-alcohol phosphatidyltransferase class-I family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS11770 ^@ http://purl.uniprot.org/uniprot/I3YBK4 ^@ Caution|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-I aminoacyl-tRNA synthetase family.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer. http://togogenome.org/gene/765911:THIVI_RS09595 ^@ http://purl.uniprot.org/uniprot/I3YAC6 ^@ Function ^@ Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. http://togogenome.org/gene/765911:THIVI_RS14940 ^@ http://purl.uniprot.org/uniprot/I3YD93 ^@ Similarity ^@ Belongs to the HesB/IscA family. http://togogenome.org/gene/765911:THIVI_RS09365 ^@ http://purl.uniprot.org/uniprot/I3YA76 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the NqrB/RnfD family.|||Cell inner membrane|||Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.|||The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG. http://togogenome.org/gene/765911:THIVI_RS14865 ^@ http://purl.uniprot.org/uniprot/I3YD78 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the thioredoxin family. DsbE subfamily.|||Cell inner membrane http://togogenome.org/gene/765911:THIVI_RS01910 ^@ http://purl.uniprot.org/uniprot/I3Y644 ^@ Function ^@ Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. http://togogenome.org/gene/765911:THIVI_RS20865 ^@ http://purl.uniprot.org/uniprot/I3YGL0 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bS16 family. http://togogenome.org/gene/765911:THIVI_RS13585 ^@ http://purl.uniprot.org/uniprot/I3YCJ4 ^@ Function|||Subcellular Location Annotation ^@ Cytoplasm|||Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. http://togogenome.org/gene/765911:THIVI_RS00360 ^@ http://purl.uniprot.org/uniprot/I3Y590 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the NqrB/RnfD family.|||Cell inner membrane|||Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.|||The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG. http://togogenome.org/gene/765911:THIVI_RS17920 ^@ http://purl.uniprot.org/uniprot/I3YEY0 ^@ Similarity ^@ Belongs to the HypD family. http://togogenome.org/gene/765911:THIVI_RS08700 ^@ http://purl.uniprot.org/uniprot/I3Y9U9 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ExbB/TolQ family.|||Cell inner membrane|||Membrane|||Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.|||The Tol-Pal system is composed of five core proteins: the inner membrane proteins TolA, TolQ and TolR, the periplasmic protein TolB and the outer membrane protein Pal. They form a network linking the inner and outer membranes and the peptidoglycan layer. http://togogenome.org/gene/765911:THIVI_RS15935 ^@ http://purl.uniprot.org/uniprot/U3GJJ6 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the glycosyltransferase 51 family.|||Cell inner membrane|||Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. http://togogenome.org/gene/765911:THIVI_RS19900 ^@ http://purl.uniprot.org/uniprot/I3YG20 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the methyl-accepting chemotaxis (MCP) protein family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS04310 ^@ http://purl.uniprot.org/uniprot/I3Y7F1 ^@ Function|||Similarity ^@ Belongs to the rhamnosyl O-methyltransferase family.|||Catalyzes the O-methylation of the hydroxyl group located on C-2 of the first rhamnosyl residue linked to the phenolic group of glycosylated phenolphthiocerol dimycocerosates (PGL) and p-hydroxybenzoic acid derivatives (p-HBAD). http://togogenome.org/gene/765911:THIVI_RS02255 ^@ http://purl.uniprot.org/uniprot/I3Y6B0 ^@ Function|||Similarity ^@ Belongs to the Ap4A hydrolase family.|||Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP. http://togogenome.org/gene/765911:THIVI_RS14135 ^@ http://purl.uniprot.org/uniprot/I3YCU8 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS15655 ^@ http://purl.uniprot.org/uniprot/I3YDN8 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the EPSP synthase family. MurA subfamily.|||Cell wall formation. Adds enolpyruvyl to UDP-N-acetylglucosamine.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS14575 ^@ http://purl.uniprot.org/uniprot/I3YD22 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ ATPase component of the type II secretion system required for the energy-dependent secretion of extracellular factors such as proteases and toxins from the periplasm. Acts as a molecular motor to provide the energy that is required for assembly of the pseudopilus and the extrusion of substrates generated in the cytoplasm.|||Belongs to the GSP E family.|||Cell inner membrane http://togogenome.org/gene/765911:THIVI_RS00765 ^@ http://purl.uniprot.org/uniprot/I3Y5G6 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS19420 ^@ http://purl.uniprot.org/uniprot/I3YFT3 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the CysZ family.|||Cell inner membrane|||High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway. http://togogenome.org/gene/765911:THIVI_RS16385 ^@ http://purl.uniprot.org/uniprot/I3YE31 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PPase family.|||Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.|||Cytoplasm|||Homohexamer. http://togogenome.org/gene/765911:THIVI_RS20405 ^@ http://purl.uniprot.org/uniprot/I3YGB8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS13 family.|||Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites.|||Part of the 30S ribosomal subunit. Forms a loose heterodimer with protein S19. Forms two bridges to the 50S subunit in the 70S ribosome. http://togogenome.org/gene/765911:THIVI_RS14095 ^@ http://purl.uniprot.org/uniprot/I3YCU0 ^@ Similarity ^@ Belongs to the UPF0178 family. http://togogenome.org/gene/765911:THIVI_RS02530 ^@ http://purl.uniprot.org/uniprot/I3Y6G3 ^@ Similarity ^@ Belongs to the citrate synthase family. http://togogenome.org/gene/765911:THIVI_RS13380 ^@ http://purl.uniprot.org/uniprot/I3YCF3 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the BamA family.|||Cell outer membrane|||Part of the Bam complex.|||Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. http://togogenome.org/gene/765911:THIVI_RS12650 ^@ http://purl.uniprot.org/uniprot/I3YC26 ^@ Similarity ^@ Belongs to the ArsC family. http://togogenome.org/gene/765911:THIVI_RS11565 ^@ http://purl.uniprot.org/uniprot/I3YBG7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the 'phage' integrase family. XerC subfamily.|||Cytoplasm|||Forms a cyclic heterotetrameric complex composed of two molecules of XerC and two molecules of XerD.|||Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC-XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. http://togogenome.org/gene/765911:THIVI_RS06890 ^@ http://purl.uniprot.org/uniprot/I3Y8W1 ^@ Similarity ^@ Belongs to the small heat shock protein (HSP20) family. http://togogenome.org/gene/765911:THIVI_RS01915 ^@ http://purl.uniprot.org/uniprot/I3Y646 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Bacterial flagellum basal body|||Belongs to the flagella basal body rod proteins family.|||Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.|||The basal body constitutes a major portion of the flagellar organelle and consists of a number of rings mounted on a central rod. http://togogenome.org/gene/765911:THIVI_RS21045 ^@ http://purl.uniprot.org/uniprot/I3YGP5 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Cytoplasm|||In the N-terminal section; belongs to the FGAMS family.|||Monomer.|||Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. http://togogenome.org/gene/765911:THIVI_RS10275 ^@ http://purl.uniprot.org/uniprot/I3YAR2 ^@ Similarity ^@ Belongs to the ArsC family. http://togogenome.org/gene/765911:THIVI_RS10645 ^@ http://purl.uniprot.org/uniprot/I3YAY4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the GSP H family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS18150 ^@ http://purl.uniprot.org/uniprot/I3YF29 ^@ Cofactor|||Function|||Similarity ^@ Adenine glycosylase active on G-A mispairs. MutY also corrects error-prone DNA synthesis past GO lesions which are due to the oxidatively damaged form of guanine: 7,8-dihydro-8-oxoguanine (8-oxo-dGTP).|||Belongs to the Nth/MutY family.|||Binds 1 [4Fe-4S] cluster. http://togogenome.org/gene/765911:THIVI_RS13600 ^@ http://purl.uniprot.org/uniprot/I3YCJ7 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the glutamine synthetase family.|||Cytoplasm|||Oligomer of 12 subunits arranged in the form of two hexagons. http://togogenome.org/gene/765911:THIVI_RS18785 ^@ http://purl.uniprot.org/uniprot/I3YFF6 ^@ Cofactor|||Function|||Miscellaneous|||Similarity|||Subunit ^@ Belongs to the HMBS family.|||Binds 1 dipyrromethane group covalently.|||Monomer.|||Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.|||The porphobilinogen subunits are added to the dipyrromethane group. http://togogenome.org/gene/765911:THIVI_RS08745 ^@ http://purl.uniprot.org/uniprot/I3Y9W0 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the LptF/LptG family.|||Component of the lipopolysaccharide transport and assembly complex. The LptBFG transporter is composed of two ATP-binding proteins (LptB) and two transmembrane proteins (LptF and LptG).|||Membrane|||Part of the ABC transporter complex LptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane. http://togogenome.org/gene/765911:THIVI_RS18360 ^@ http://purl.uniprot.org/uniprot/I3YF69 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-I aminoacyl-tRNA synthetase family.|||Cytoplasm|||Monomer. http://togogenome.org/gene/765911:THIVI_RS03405 ^@ http://purl.uniprot.org/uniprot/I3Y6Y5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the HupC/HyaC/HydC family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS05125 ^@ http://purl.uniprot.org/uniprot/I3Y7W3 ^@ Subcellular Location Annotation ^@ Cell membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS04105 ^@ http://purl.uniprot.org/uniprot/I3Y7A9 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the tRNA(Ile)-lysidine synthase family.|||Cytoplasm|||Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine.|||The N-terminal region contains the highly conserved SGGXDS motif, predicted to be a P-loop motif involved in ATP binding. http://togogenome.org/gene/765911:THIVI_RS13505 ^@ http://purl.uniprot.org/uniprot/I3YCH8 ^@ Function ^@ Membrane-anchoring subunit of succinate dehydrogenase (SDH). http://togogenome.org/gene/765911:THIVI_RS06135 ^@ http://purl.uniprot.org/uniprot/I3Y8G8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the peptidase U32 family. UbiV subfamily.|||Forms an heterodimer with UbiU.|||Required for O(2)-independent ubiquinone (coenzyme Q) biosynthesis. Together with UbiU, is essential for the C6-hydroxylation reaction in the oxygen-independent ubiquinone biosynthesis pathway. http://togogenome.org/gene/765911:THIVI_RS11010 ^@ http://purl.uniprot.org/uniprot/I3YB58 ^@ Function ^@ Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. http://togogenome.org/gene/765911:THIVI_RS22365 ^@ http://purl.uniprot.org/uniprot/I3YHF3 ^@ Similarity ^@ Belongs to the metallophosphoesterase superfamily. YfcE family. http://togogenome.org/gene/765911:THIVI_RS01325 ^@ http://purl.uniprot.org/uniprot/I3Y5S4 ^@ Function|||Similarity|||Subunit ^@ Belongs to the DNA polymerase type-A family.|||In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.|||Single-chain monomer with multiple functions. http://togogenome.org/gene/765911:THIVI_RS16835 ^@ http://purl.uniprot.org/uniprot/I3YEC2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS09620 ^@ http://purl.uniprot.org/uniprot/I3YAD1 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the IPP isomerase type 1 family.|||Binds 1 Mg(2+) ion per subunit. The magnesium ion binds only when substrate is bound.|||Binds 1 Mn(2+) ion per subunit.|||Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS05700 ^@ http://purl.uniprot.org/uniprot/I3Y881 ^@ Subcellular Location Annotation ^@ Cell inner membrane http://togogenome.org/gene/765911:THIVI_RS18195 ^@ http://purl.uniprot.org/uniprot/I3YF37 ^@ Similarity|||Subunit ^@ Belongs to the [NiFe]/[NiFeSe] hydrogenase small subunit family.|||Heterodimer of a large and a small subunit. http://togogenome.org/gene/765911:THIVI_RS01415 ^@ http://purl.uniprot.org/uniprot/I3Y5U6 ^@ Function ^@ Member of the two-component regulatory system PhoR/PhoB involved in the phosphate regulon genes expression. PhoR may function as a membrane-associated protein kinase that phosphorylates PhoB in response to environmental signals. http://togogenome.org/gene/765911:THIVI_RS09640 ^@ http://purl.uniprot.org/uniprot/I3YAD5 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.|||Belongs to the antenna complex beta subunit family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS14580 ^@ http://purl.uniprot.org/uniprot/I3YD23 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.|||Binds 1 FMN per subunit.|||Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor.|||Cell membrane|||Monomer. http://togogenome.org/gene/765911:THIVI_RS19170 ^@ http://purl.uniprot.org/uniprot/I3YFN3 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the RNase H family.|||Binds 1 Mg(2+) ion per subunit. May bind a second metal ion at a regulatory site, or after substrate binding.|||Cytoplasm|||Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.|||Monomer. http://togogenome.org/gene/765911:THIVI_RS07060 ^@ http://purl.uniprot.org/uniprot/G4DT07 ^@ Similarity ^@ Belongs to the transposase 11 family. http://togogenome.org/gene/765911:THIVI_RS10635 ^@ http://purl.uniprot.org/uniprot/I3YAY2 ^@ Similarity ^@ Belongs to the 5'-nucleotidase family. http://togogenome.org/gene/765911:THIVI_RS16730 ^@ http://purl.uniprot.org/uniprot/I3YEA1 ^@ Similarity ^@ Belongs to the bacterial solute-binding protein ModA family. http://togogenome.org/gene/765911:THIVI_RS09165 ^@ http://purl.uniprot.org/uniprot/I3YA43 ^@ Function|||Similarity ^@ Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.|||Catalyzes two reactions in de novo purine nucleotide biosynthesis. Catalyzes the breakdown of 5-aminoimidazole- (N-succinylocarboxamide) ribotide (SAICAR or 2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinate) to 5-aminoimidazole-4-carboxamide ribotide (AICAR or 5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide) and fumarate, and of adenylosuccinate (ADS or N(6)-(1,2-dicarboxyethyl)-AMP) to adenosine monophosphate (AMP) and fumarate. http://togogenome.org/gene/765911:THIVI_RS09360 ^@ http://purl.uniprot.org/uniprot/I3YA74 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.|||Binds 2 [4Fe-4S] clusters per subunit.|||Cell inner membrane|||Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.|||The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG. http://togogenome.org/gene/765911:THIVI_RS16430 ^@ http://purl.uniprot.org/uniprot/I3YE40 ^@ Function|||Similarity|||Subunit ^@ Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.|||Belongs to the ZapA family. Type 1 subfamily.|||Homodimer. Interacts with FtsZ. http://togogenome.org/gene/765911:THIVI_RS05335 ^@ http://purl.uniprot.org/uniprot/I3Y809 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the thioredoxin family. DsbD subfamily.|||Cell inner membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane|||Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. http://togogenome.org/gene/765911:THIVI_RS21810 ^@ http://purl.uniprot.org/uniprot/I3YH40 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the CRISPR-associated exonuclease Cas4 family.|||CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA).|||Mg(2+) or Mn(2+) required for ssDNA cleavage activity. http://togogenome.org/gene/765911:THIVI_RS08470 ^@ http://purl.uniprot.org/uniprot/I3Y9Q7 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the chorismate synthase family.|||Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.|||Homotetramer.|||Reduced FMN (FMNH(2)). http://togogenome.org/gene/765911:THIVI_RS20000 ^@ http://purl.uniprot.org/uniprot/I3YG41 ^@ Similarity ^@ Belongs to the peptidase U62 family. http://togogenome.org/gene/765911:THIVI_RS20890 ^@ http://purl.uniprot.org/uniprot/I3YGL5 ^@ Similarity ^@ Belongs to the tRNA methyltransferase O family. http://togogenome.org/gene/765911:THIVI_RS17545 ^@ http://purl.uniprot.org/uniprot/I3YEQ7 ^@ Function|||Similarity ^@ Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage.|||Belongs to the Nudix hydrolase family. RppH subfamily. http://togogenome.org/gene/765911:THIVI_RS09670 ^@ http://purl.uniprot.org/uniprot/I3YAE2 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.|||Belongs to the antenna complex beta subunit family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS13880 ^@ http://purl.uniprot.org/uniprot/I3YCQ3 ^@ Similarity ^@ Belongs to the glutamate synthase family. http://togogenome.org/gene/765911:THIVI_RS08105 ^@ http://purl.uniprot.org/uniprot/I3Y9I3 ^@ Similarity ^@ Belongs to the precorrin methyltransferase family. http://togogenome.org/gene/765911:THIVI_RS10805 ^@ http://purl.uniprot.org/uniprot/I3YB15 ^@ Function|||Similarity ^@ Belongs to the sigma-54 factor family.|||Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. http://togogenome.org/gene/765911:THIVI_RS11500 ^@ http://purl.uniprot.org/uniprot/I3YBF3 ^@ Similarity ^@ Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. http://togogenome.org/gene/765911:THIVI_RS22200 ^@ http://purl.uniprot.org/uniprot/I3YHB7 ^@ Function|||Similarity ^@ Belongs to the RecN family.|||May be involved in recombinational repair of damaged DNA. http://togogenome.org/gene/765911:THIVI_RS08525 ^@ http://purl.uniprot.org/uniprot/I3Y9R8 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the radical SAM superfamily. Biotin synthase family.|||Binds 1 [2Fe-2S] cluster. The cluster is coordinated with 3 cysteines and 1 arginine.|||Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.|||Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism.|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS20640 ^@ http://purl.uniprot.org/uniprot/G4DT07 ^@ Similarity ^@ Belongs to the transposase 11 family. http://togogenome.org/gene/765911:THIVI_RS10395 ^@ http://purl.uniprot.org/uniprot/I3YAT3 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the malate synthase family. GlcB subfamily.|||Cytoplasm|||Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer. http://togogenome.org/gene/765911:THIVI_RS02660 ^@ http://purl.uniprot.org/uniprot/I3Y6I8 ^@ Similarity ^@ Belongs to the DsrF/TusC family. http://togogenome.org/gene/765911:THIVI_RS17525 ^@ http://purl.uniprot.org/uniprot/I3YEQ2 ^@ Function|||Similarity ^@ Belongs to the MurCDEF family. Mpl subfamily.|||Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate by linking it to UDP-N-acetylmuramate. http://togogenome.org/gene/765911:THIVI_RS08460 ^@ http://purl.uniprot.org/uniprot/I3Y9Q5 ^@ Similarity ^@ Belongs to the glycosyl hydrolase 13 family. http://togogenome.org/gene/765911:THIVI_RS14405 ^@ http://purl.uniprot.org/uniprot/G4DT07 ^@ Similarity ^@ Belongs to the transposase 11 family. http://togogenome.org/gene/765911:THIVI_RS13925 ^@ http://purl.uniprot.org/uniprot/I3YCR2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the GSP K family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS16845 ^@ http://purl.uniprot.org/uniprot/I3YEC4 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the aerobic coproporphyrinogen-III oxidase family.|||Cytoplasm|||Homodimer.|||Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX. http://togogenome.org/gene/765911:THIVI_RS15825 ^@ http://purl.uniprot.org/uniprot/I3YDS0 ^@ Cofactor|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the Fur family.|||Binds 1 zinc ion per subunit.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS09785 ^@ http://purl.uniprot.org/uniprot/I3YAG7 ^@ Cofactor|||Domain|||Function|||Similarity|||Subunit ^@ A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA.|||Belongs to the helicase family. UvrD subfamily.|||Binds 1 Mg(2+) ion per subunit.|||Heterotrimer of RecB, RecC and RecD. All subunits contribute to DNA-binding. Interacts with RecA.|||The C-terminal domain has nuclease activity and interacts with RecD. It interacts with RecA, facilitating its loading onto ssDNA.|||The N-terminal DNA-binding domain is a ssDNA-dependent ATPase and has ATP-dependent 3'-5' helicase function. This domain interacts with RecC. http://togogenome.org/gene/765911:THIVI_RS03585 ^@ http://purl.uniprot.org/uniprot/I3Y720 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the MgtC/SapB family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS03455 ^@ http://purl.uniprot.org/uniprot/I3Y6Z5 ^@ Similarity ^@ Belongs to the NadC/ModD family. http://togogenome.org/gene/765911:THIVI_RS01770 ^@ http://purl.uniprot.org/uniprot/U3GJJ3 ^@ Similarity|||Subcellular Location Annotation ^@ Bacterial flagellum basal body|||Belongs to the FliO/MopB family.|||Cell membrane http://togogenome.org/gene/765911:THIVI_RS06210 ^@ http://purl.uniprot.org/uniprot/I3Y8I3 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the YciB family.|||Cell inner membrane|||Plays a role in cell envelope biogenesis, maintenance of cell envelope integrity and membrane homeostasis. http://togogenome.org/gene/765911:THIVI_RS03040 ^@ http://purl.uniprot.org/uniprot/I3Y6R2 ^@ Function|||Similarity ^@ Belongs to the protein N5-glutamine methyltransferase family. PrmB subfamily.|||Methylates ribosomal protein uL3 on a specific glutamine residue. http://togogenome.org/gene/765911:THIVI_RS01405 ^@ http://purl.uniprot.org/uniprot/I3Y5U4 ^@ Similarity ^@ Belongs to the Nudix hydrolase family. http://togogenome.org/gene/765911:THIVI_RS10095 ^@ http://purl.uniprot.org/uniprot/I3YAM8 ^@ Function|||Similarity ^@ Belongs to the cyclophilin-type PPIase family.|||PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. http://togogenome.org/gene/765911:THIVI_RS06485 ^@ http://purl.uniprot.org/uniprot/I3Y8N3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/765911:THIVI_RS13495 ^@ http://purl.uniprot.org/uniprot/I3YCH6 ^@ Similarity ^@ Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. http://togogenome.org/gene/765911:THIVI_RS20430 ^@ http://purl.uniprot.org/uniprot/I3YGC3 ^@ Similarity ^@ Belongs to the SAM hydrolase / SAM-dependent halogenase family. http://togogenome.org/gene/765911:THIVI_RS20240 ^@ http://purl.uniprot.org/uniprot/I3YG84 ^@ Function|||Similarity ^@ Belongs to the NusG family.|||Participates in transcription elongation, termination and antitermination. http://togogenome.org/gene/765911:THIVI_RS17345 ^@ http://purl.uniprot.org/uniprot/I3YEM3 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the adenosylhomocysteinase family.|||Binds 1 NAD(+) per subunit.|||Cytoplasm|||May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. http://togogenome.org/gene/765911:THIVI_RS16475 ^@ http://purl.uniprot.org/uniprot/I3YE50 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the RnfG family.|||Cell inner membrane|||Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.|||The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG. http://togogenome.org/gene/765911:THIVI_RS03180 ^@ http://purl.uniprot.org/uniprot/I3Y6T8 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS15325 ^@ http://purl.uniprot.org/uniprot/I3YDH0 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.|||Cytoplasm|||Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. http://togogenome.org/gene/765911:THIVI_RS14915 ^@ http://purl.uniprot.org/uniprot/I3YD88 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS02345 ^@ http://purl.uniprot.org/uniprot/I3Y6C8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.|||Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Seems to participate in the biosynthesis of the nitrogenase metalloclusters by providing the inorganic sulfur required for the Fe-S core formation.|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS12740 ^@ http://purl.uniprot.org/uniprot/I3YC43 ^@ Function|||Similarity ^@ ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.|||Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. YchF/OLA1 subfamily. http://togogenome.org/gene/765911:THIVI_RS14895 ^@ http://purl.uniprot.org/uniprot/I3YD84 ^@ Function|||Similarity ^@ Belongs to the MsrA Met sulfoxide reductase family.|||Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. http://togogenome.org/gene/765911:THIVI_RS14440 ^@ http://purl.uniprot.org/uniprot/I3YCZ7 ^@ Similarity ^@ Belongs to the beta-class carbonic anhydrase family. http://togogenome.org/gene/765911:THIVI_RS18125 ^@ http://purl.uniprot.org/uniprot/I3YF24 ^@ Cofactor ^@ Binds 1 heme c group covalently per subunit. http://togogenome.org/gene/765911:THIVI_RS20315 ^@ http://purl.uniprot.org/uniprot/I3YG99 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL2 family.|||One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome.|||Part of the 50S ribosomal subunit. Forms a bridge to the 30S subunit in the 70S ribosome. http://togogenome.org/gene/765911:THIVI_RS09790 ^@ http://purl.uniprot.org/uniprot/I3YAG8 ^@ Function|||Similarity|||Subunit ^@ A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild-type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity.|||Belongs to the RecC family.|||Heterotrimer of RecB, RecC and RecD. All subunits contribute to DNA-binding. http://togogenome.org/gene/765911:THIVI_RS00880 ^@ http://purl.uniprot.org/uniprot/I3Y5I5 ^@ Similarity ^@ Belongs to the bacterial secretin family. http://togogenome.org/gene/765911:THIVI_RS02600 ^@ http://purl.uniprot.org/uniprot/I3Y6H7 ^@ Function|||Similarity|||Subunit ^@ Belongs to the OMP decarboxylase family. Type 1 subfamily.|||Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP).|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS22925 ^@ http://purl.uniprot.org/uniprot/I3YDW5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the TonB family.|||Cell inner membrane http://togogenome.org/gene/765911:THIVI_RS12290 ^@ http://purl.uniprot.org/uniprot/I3YBV4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the imidazoleglycerol-phosphate dehydratase family.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS00310 ^@ http://purl.uniprot.org/uniprot/I3Y580 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TatA/E family.|||Cell inner membrane|||Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.|||The Tat system comprises two distinct complexes: a TatABC complex, containing multiple copies of TatA, TatB and TatC subunits, and a separate TatA complex, containing only TatA subunits. Substrates initially bind to the TatABC complex, which probably triggers association of the separate TatA complex to form the active translocon. http://togogenome.org/gene/765911:THIVI_RS05535 ^@ http://purl.uniprot.org/uniprot/I3Y848 ^@ Similarity ^@ Belongs to the WrbA family. http://togogenome.org/gene/765911:THIVI_RS08560 ^@ http://purl.uniprot.org/uniprot/I3Y9S5 ^@ Caution|||Cofactor|||Similarity|||Subunit ^@ Belongs to the CarB family.|||Binds 4 Mg(2+) or Mn(2+) ions per subunit.|||Composed of two chains; the small (or glutamine) chain promotes the hydrolysis of glutamine to ammonia, which is used by the large (or ammonia) chain to synthesize carbamoyl phosphate.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS02380 ^@ http://purl.uniprot.org/uniprot/I3Y6D5 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Cytoplasm|||Homohexamer.|||In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family.|||In the N-terminal section; belongs to the CobB/CobQ family.|||Involved in acetate metabolism.|||The N-terminal region seems to be important for proper quaternary structure. The C-terminal region contains the substrate-binding site. http://togogenome.org/gene/765911:THIVI_RS16785 ^@ http://purl.uniprot.org/uniprot/I3YEB2 ^@ Function|||Similarity ^@ Allosteric enzyme that catalyzes the rate-limiting step in glycogen catabolism, the phosphorolytic cleavage of glycogen to produce glucose-1-phosphate, and plays a central role in maintaining cellular and organismal glucose homeostasis.|||Belongs to the glycogen phosphorylase family.|||Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. http://togogenome.org/gene/765911:THIVI_RS19715 ^@ http://purl.uniprot.org/uniprot/I3YFY6 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bS21 family. http://togogenome.org/gene/765911:THIVI_RS21800 ^@ http://purl.uniprot.org/uniprot/G4DT07 ^@ Similarity ^@ Belongs to the transposase 11 family. http://togogenome.org/gene/765911:THIVI_RS18850 ^@ http://purl.uniprot.org/uniprot/I3YFH1 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ZapD family.|||Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity.|||Cytoplasm|||Interacts with FtsZ. http://togogenome.org/gene/765911:THIVI_RS04910 ^@ http://purl.uniprot.org/uniprot/I3Y7S0 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the thioester dehydratase family. FabA subfamily.|||Cytoplasm|||Homodimer.|||Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length. http://togogenome.org/gene/765911:THIVI_RS11165 ^@ http://purl.uniprot.org/uniprot/I3YB88 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the SecA family.|||Cell inner membrane|||Cytoplasm|||Monomer and homodimer. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF-YajC and YidC.|||Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. http://togogenome.org/gene/765911:THIVI_RS11820 ^@ http://purl.uniprot.org/uniprot/I3YBL3 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Acts as a magnesium transporter.|||Belongs to the SLC41A transporter family.|||Cell membrane|||Homodimer.|||Membrane http://togogenome.org/gene/765911:THIVI_RS11570 ^@ http://purl.uniprot.org/uniprot/I3YBG8 ^@ Cofactor|||Function|||Subunit ^@ Binds 2 [4Fe-4S] clusters. In this family the first cluster has a non-standard and varying [4Fe-4S] binding motif CX(2)CX(2)CX(4-5)CP.|||Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.|||Heterodimer of the IorA and IorB subunits. http://togogenome.org/gene/765911:THIVI_RS15115 ^@ http://purl.uniprot.org/uniprot/I3YDC9 ^@ Caution|||Similarity|||Subcellular Location Annotation ^@ Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS17740 ^@ http://purl.uniprot.org/uniprot/I3YEU4 ^@ Similarity ^@ Belongs to the bacterial solute-binding protein 3 family. http://togogenome.org/gene/765911:THIVI_RS20165 ^@ http://purl.uniprot.org/uniprot/I3YG74 ^@ Domain|||Function|||Miscellaneous|||Similarity|||Subunit ^@ Belongs to the glutamyl-tRNA reductase family.|||Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).|||During catalysis, the active site Cys acts as a nucleophile attacking the alpha-carbonyl group of tRNA-bound glutamate with the formation of a thioester intermediate between enzyme and glutamate, and the concomitant release of tRNA(Glu). The thioester intermediate is finally reduced by direct hydride transfer from NADPH, to form the product GSA.|||Homodimer.|||Possesses an unusual extended V-shaped dimeric structure with each monomer consisting of three distinct domains arranged along a curved 'spinal' alpha-helix. The N-terminal catalytic domain specifically recognizes the glutamate moiety of the substrate. The second domain is the NADPH-binding domain, and the third C-terminal domain is responsible for dimerization. http://togogenome.org/gene/765911:THIVI_RS02705 ^@ http://purl.uniprot.org/uniprot/I3Y6J7 ^@ Domain|||Function|||Miscellaneous|||Similarity ^@ Belongs to the CobB/CbiA family.|||Belongs to the CobB/CobQ family. CobQ subfamily.|||Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source.|||Comprises of two domains. The C-terminal domain contains the binding site for glutamine and catalyzes the hydrolysis of this substrate to glutamate and ammonia. The N-terminal domain is anticipated to bind ATP and cobyrinate and catalyzes the ultimate synthesis of the diamide product. The ammonia produced via the glutaminase domain is probably translocated to the adjacent domain via a molecular tunnel, where it reacts with an activated intermediate.|||The a and c carboxylates of cobyrinate are activated for nucleophilic attack via formation of a phosphorylated intermediate by ATP. CbiA catalyzes first the amidation of the c-carboxylate, and then that of the a-carboxylate. http://togogenome.org/gene/765911:THIVI_RS02440 ^@ http://purl.uniprot.org/uniprot/I3Y6E7 ^@ Function|||Similarity ^@ Belongs to the pseudouridine synthase TruD family.|||Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs. http://togogenome.org/gene/765911:THIVI_RS18130 ^@ http://purl.uniprot.org/uniprot/I3YF25 ^@ Similarity ^@ Belongs to the GST superfamily. Omega family. http://togogenome.org/gene/765911:THIVI_RS02355 ^@ http://purl.uniprot.org/uniprot/I3Y6D0 ^@ Similarity ^@ Belongs to the NifZ family. http://togogenome.org/gene/765911:THIVI_RS19700 ^@ http://purl.uniprot.org/uniprot/I3YFY3 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PlsY family.|||Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.|||Cell inner membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Probably interacts with PlsX. http://togogenome.org/gene/765911:THIVI_RS03470 ^@ http://purl.uniprot.org/uniprot/I3Y6Z8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the chaperonin (HSP60) family.|||Cytoplasm|||Forms a cylinder of 14 subunits composed of two heptameric rings stacked back-to-back. Interacts with the co-chaperonin GroES.|||Together with its co-chaperonin GroES, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding. http://togogenome.org/gene/765911:THIVI_RS15005 ^@ http://purl.uniprot.org/uniprot/I3YDA6 ^@ Function|||Similarity ^@ Belongs to the NadC/ModD family.|||Involved in the catabolism of quinolinic acid (QA). http://togogenome.org/gene/765911:THIVI_RS17685 ^@ http://purl.uniprot.org/uniprot/I3YET4 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the NifD/NifK/NifE/NifN family.|||Binds 1 [8Fe-7S] cluster per heterodimer.|||Tetramer of two alpha and two beta chains. Forms complex with the iron protein (nitrogenase component 2).|||This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation. http://togogenome.org/gene/765911:THIVI_RS15710 ^@ http://purl.uniprot.org/uniprot/I3YDP7 ^@ Function|||Similarity|||Subunit ^@ Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.|||Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate.|||Homotetramer; dimer of dimers.|||Involved in the catabolism of short chain fatty acids (SCFA) via the 2-methylcitrate cycle (propionate degradation route). Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate via an alpha-carboxy-carbanion intermediate. http://togogenome.org/gene/765911:THIVI_RS03790 ^@ http://purl.uniprot.org/uniprot/I3Y759 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Bacterial flagellum|||Belongs to the bacterial flagellin family.|||Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.|||Secreted http://togogenome.org/gene/765911:THIVI_RS20265 ^@ http://purl.uniprot.org/uniprot/I3YG89 ^@ Function|||Similarity|||Subunit ^@ Belongs to the RNA polymerase beta chain family.|||DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.|||The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription. http://togogenome.org/gene/765911:THIVI_RS20780 ^@ http://purl.uniprot.org/uniprot/I3YGJ3 ^@ Function|||Similarity ^@ Belongs to the AAA ATPase family. RarA/MGS1/WRNIP1 subfamily.|||DNA-dependent ATPase that plays important roles in cellular responses to stalled DNA replication processes. http://togogenome.org/gene/765911:THIVI_RS08420 ^@ http://purl.uniprot.org/uniprot/I3Y9P6 ^@ Similarity ^@ Belongs to the asparagine synthetase family. http://togogenome.org/gene/765911:THIVI_RS14630 ^@ http://purl.uniprot.org/uniprot/G4DT07 ^@ Similarity ^@ Belongs to the transposase 11 family. http://togogenome.org/gene/765911:THIVI_RS01185 ^@ http://purl.uniprot.org/uniprot/I3Y5P5 ^@ Function|||PTM|||Similarity ^@ Acetylated. Deacetylation by the SIR2-homolog deacetylase activates the enzyme.|||Belongs to the ATP-dependent AMP-binding enzyme family.|||Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. http://togogenome.org/gene/765911:THIVI_RS14080 ^@ http://purl.uniprot.org/uniprot/I3YCT8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.|||Homotetramer.|||Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc. http://togogenome.org/gene/765911:THIVI_RS05150 ^@ http://purl.uniprot.org/uniprot/I3Y7W8 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS05370 ^@ http://purl.uniprot.org/uniprot/I3Y816 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the methyltransferase superfamily. PrmA family.|||Cytoplasm|||Methylates ribosomal protein L11. http://togogenome.org/gene/765911:THIVI_RS20370 ^@ http://purl.uniprot.org/uniprot/I3YGB0 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS8 family.|||One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.|||Part of the 30S ribosomal subunit. Contacts proteins S5 and S12. http://togogenome.org/gene/765911:THIVI_RS19655 ^@ http://purl.uniprot.org/uniprot/I3YFX4 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.|||Binds 1 zinc ion per subunit.|||Cytoplasm|||Monomer. Associates with 30S ribosomal subunit, binds 16S rRNA.|||One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit. http://togogenome.org/gene/765911:THIVI_RS17745 ^@ http://purl.uniprot.org/uniprot/I3YEU5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the autoinducer-2 exporter (AI-2E) (TC 2.A.86) family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS20935 ^@ http://purl.uniprot.org/uniprot/I3YGM4 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.|||Catalyzes the transfer of the alpha-amino group from S-adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only aminotransferase known to utilize SAM as an amino donor.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS01555 ^@ http://purl.uniprot.org/uniprot/I3Y5X4 ^@ Domain|||Function|||PTM|||Similarity|||Subcellular Location Annotation ^@ Belongs to the CheB family.|||Contains a C-terminal catalytic domain, and an N-terminal region which modulates catalytic activity.|||Cytoplasm|||Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid.|||Phosphorylated by CheA. Phosphorylation of the N-terminal regulatory domain activates the methylesterase activity. http://togogenome.org/gene/765911:THIVI_RS19795 ^@ http://purl.uniprot.org/uniprot/I3YFZ9 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS12470 ^@ http://purl.uniprot.org/uniprot/I3YBY9 ^@ Subcellular Location Annotation ^@ Cell inner membrane http://togogenome.org/gene/765911:THIVI_RS01780 ^@ http://purl.uniprot.org/uniprot/U3GKY0 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Bacterial flagellum basal body|||Belongs to the FliQ/MopD/SpaQ family.|||Cell membrane|||Membrane|||Role in flagellar biosynthesis. http://togogenome.org/gene/765911:THIVI_RS16145 ^@ http://purl.uniprot.org/uniprot/I3YDY6 ^@ Similarity ^@ Belongs to the YggT family. http://togogenome.org/gene/765911:THIVI_RS17915 ^@ http://purl.uniprot.org/uniprot/I3YEX9 ^@ Similarity ^@ Belongs to the HupF/HypC family. http://togogenome.org/gene/765911:THIVI_RS22010 ^@ http://purl.uniprot.org/uniprot/I3YH80 ^@ Function|||Similarity ^@ Belongs to the PemK/MazF family.|||Toxic component of a type II toxin-antitoxin (TA) system. http://togogenome.org/gene/765911:THIVI_RS01720 ^@ http://purl.uniprot.org/uniprot/I3Y608 ^@ Similarity|||Subcellular Location Annotation ^@ Bacterial flagellum basal body|||Belongs to the FliE family. http://togogenome.org/gene/765911:THIVI_RS13745 ^@ http://purl.uniprot.org/uniprot/I3YCM9 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-II aminoacyl-tRNA synthetase family.|||Cytoplasm|||Tetramer of two alpha and two beta subunits. http://togogenome.org/gene/765911:THIVI_RS08300 ^@ http://purl.uniprot.org/uniprot/I3Y9M2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the DsrC/TusE family.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS06775 ^@ http://purl.uniprot.org/uniprot/I3Y8T8 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS13075 ^@ http://purl.uniprot.org/uniprot/I3YC92 ^@ Function|||Similarity ^@ Belongs to the HypA/HybF family.|||Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. http://togogenome.org/gene/765911:THIVI_RS01220 ^@ http://purl.uniprot.org/uniprot/I3Y5Q2 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the calycin superfamily. Lipocalin family.|||Cell outer membrane|||Homodimer.|||Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids. http://togogenome.org/gene/765911:THIVI_RS15445 ^@ http://purl.uniprot.org/uniprot/I3YDJ4 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS01845 ^@ http://purl.uniprot.org/uniprot/I3Y633 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the exbB/tolQ family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS13610 ^@ http://purl.uniprot.org/uniprot/I3YCJ9 ^@ Similarity ^@ Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. http://togogenome.org/gene/765911:THIVI_RS18910 ^@ http://purl.uniprot.org/uniprot/I3YFI1 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I 20 kDa subunit family.|||Binds 1 [4Fe-4S] cluster.|||Cell inner membrane|||NDH-1 is composed of 14 different subunits. Subunits NuoB, C, D, E, F, and G constitute the peripheral sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/765911:THIVI_RS04890 ^@ http://purl.uniprot.org/uniprot/I3Y7R6 ^@ Function|||Similarity|||Subunit ^@ Belongs to the acetolactate synthase small subunit family.|||Catalyzes the conversion of 2 pyruvate molecules into acetolactate in the first common step of the biosynthetic pathway of the branched-amino acids such as leucine, isoleucine, and valine.|||Dimer of large and small chains. http://togogenome.org/gene/765911:THIVI_RS16125 ^@ http://purl.uniprot.org/uniprot/I3YDY2 ^@ Function|||Similarity|||Subunit ^@ Belongs to the RNase PH family.|||Homohexameric ring arranged as a trimer of dimers.|||Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. http://togogenome.org/gene/765911:THIVI_RS06625 ^@ http://purl.uniprot.org/uniprot/I3Y8Q5 ^@ Similarity ^@ Belongs to the UPF0260 family. http://togogenome.org/gene/765911:THIVI_RS16485 ^@ http://purl.uniprot.org/uniprot/I3YE52 ^@ Similarity ^@ Belongs to the UPF0125 (RnfH) family. http://togogenome.org/gene/765911:THIVI_RS09875 ^@ http://purl.uniprot.org/uniprot/I3YAI5 ^@ Similarity ^@ Belongs to the transposase 11 family. http://togogenome.org/gene/765911:THIVI_RS15855 ^@ http://purl.uniprot.org/uniprot/I3YDS6 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bL28 family. http://togogenome.org/gene/765911:THIVI_RS08095 ^@ http://purl.uniprot.org/uniprot/I3Y9I1 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the CobD/CbiB family.|||Cell membrane|||Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane http://togogenome.org/gene/765911:THIVI_RS14830 ^@ http://purl.uniprot.org/uniprot/I3YD70 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the CcmD/CycX/HelD family.|||Cell inner membrane|||Membrane|||Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes. http://togogenome.org/gene/765911:THIVI_RS10420 ^@ http://purl.uniprot.org/uniprot/I3YAT8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the OmpP1/FadL family.|||Cell outer membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS01695 ^@ http://purl.uniprot.org/uniprot/I3Y603 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the MotA family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS03605 ^@ http://purl.uniprot.org/uniprot/I3Y724 ^@ Similarity ^@ Belongs to the glucose-6-phosphate 1-epimerase family. http://togogenome.org/gene/765911:THIVI_RS20500 ^@ http://purl.uniprot.org/uniprot/I3YGD7 ^@ Function|||PTM|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the NapB family.|||Binds 2 heme C groups per subunit.|||Component of the periplasmic nitrate reductase NapAB complex composed of NapA and NapB.|||Electron transfer subunit of the periplasmic nitrate reductase complex NapAB.|||Periplasm http://togogenome.org/gene/765911:THIVI_RS00515 ^@ http://purl.uniprot.org/uniprot/I3Y5C0 ^@ Caution|||Function|||Similarity ^@ Belongs to the glucose-6-phosphate dehydrogenase family.|||Catalyzes the oxidation of glucose 6-phosphate to 6-phosphogluconolactone.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS08605 ^@ http://purl.uniprot.org/uniprot/I3Y9T4 ^@ Similarity ^@ Belongs to the V-ATPase E subunit family. http://togogenome.org/gene/765911:THIVI_RS01785 ^@ http://purl.uniprot.org/uniprot/U3GJY8 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Bacterial flagellum basal body|||Belongs to the FliR/MopE/SpaR family.|||Cell membrane|||Membrane|||Role in flagellar biosynthesis. http://togogenome.org/gene/765911:THIVI_RS22100 ^@ http://purl.uniprot.org/uniprot/I3YH96 ^@ Cofactor ^@ Binds 1 Mg(2+) or Mn(2+) ion per subunit. http://togogenome.org/gene/765911:THIVI_RS14805 ^@ http://purl.uniprot.org/uniprot/I3YD65 ^@ Similarity ^@ Belongs to the PEP-utilizing enzyme family. http://togogenome.org/gene/765911:THIVI_RS10425 ^@ http://purl.uniprot.org/uniprot/I3YAT9 ^@ Similarity ^@ Belongs to the YjdM family. http://togogenome.org/gene/765911:THIVI_RS09715 ^@ http://purl.uniprot.org/uniprot/I3YAF3 ^@ Similarity ^@ Belongs to the FPP/GGPP synthase family. http://togogenome.org/gene/765911:THIVI_RS20245 ^@ http://purl.uniprot.org/uniprot/I3YG85 ^@ Function|||PTM|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL11 family.|||Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.|||One or more lysine residues are methylated.|||Part of the ribosomal stalk of the 50S ribosomal subunit. Interacts with L10 and the large rRNA to form the base of the stalk. L10 forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex. http://togogenome.org/gene/765911:THIVI_RS08710 ^@ http://purl.uniprot.org/uniprot/I3Y9V2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS09390 ^@ http://purl.uniprot.org/uniprot/I3YA82 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS01410 ^@ http://purl.uniprot.org/uniprot/I3Y5U5 ^@ Function ^@ This protein is a positive regulator for the phosphate regulon. Transcription of this operon is positively regulated by PhoB and PhoR when phosphate is limited. http://togogenome.org/gene/765911:THIVI_RS14530 ^@ http://purl.uniprot.org/uniprot/I3YD14 ^@ PTM|||Similarity|||Subunit ^@ Belongs to the gamma-glutamyltransferase family.|||Cleaved by autocatalysis into a large and a small subunit.|||This enzyme consists of two polypeptide chains, which are synthesized in precursor form from a single polypeptide. http://togogenome.org/gene/765911:THIVI_RS16515 ^@ http://purl.uniprot.org/uniprot/I3YE58 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the 2-oxoacid dehydrogenase family.|||Binds 2 lipoyl cofactors covalently.|||Forms a 24-polypeptide structural core with octahedral symmetry.|||The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). http://togogenome.org/gene/765911:THIVI_RS19400 ^@ http://purl.uniprot.org/uniprot/I3YFS9 ^@ Function|||Similarity ^@ Belongs to the GTP cyclohydrolase IV family.|||Converts GTP to 7,8-dihydroneopterin triphosphate. http://togogenome.org/gene/765911:THIVI_RS00320 ^@ http://purl.uniprot.org/uniprot/I3Y582 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.|||Belongs to the universal stress protein A family.|||Cell membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS09600 ^@ http://purl.uniprot.org/uniprot/I3YAC7 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.|||Belongs to the antenna complex beta subunit family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS15255 ^@ http://purl.uniprot.org/uniprot/I3YDF7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.|||Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS04175 ^@ http://purl.uniprot.org/uniprot/I3Y7C2 ^@ Similarity ^@ Belongs to the UPF0225 family. http://togogenome.org/gene/765911:THIVI_RS17785 ^@ http://purl.uniprot.org/uniprot/I3YEV3 ^@ Subunit ^@ Monomer. http://togogenome.org/gene/765911:THIVI_RS14375 ^@ http://purl.uniprot.org/uniprot/I3YCY3 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS11940 ^@ http://purl.uniprot.org/uniprot/I3YBN7 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS16115 ^@ http://purl.uniprot.org/uniprot/I3YDY0 ^@ Similarity ^@ Belongs to the YicC/YloC family. http://togogenome.org/gene/765911:THIVI_RS00890 ^@ http://purl.uniprot.org/uniprot/I3Y5I7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the GSP F family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS10175 ^@ http://purl.uniprot.org/uniprot/I3YAP3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS07475 ^@ http://purl.uniprot.org/uniprot/I3Y970 ^@ Similarity ^@ Belongs to the N(4)/N(6)-methyltransferase family. http://togogenome.org/gene/765911:THIVI_RS16520 ^@ http://purl.uniprot.org/uniprot/I3YE59 ^@ Function ^@ Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). http://togogenome.org/gene/765911:THIVI_RS04495 ^@ http://purl.uniprot.org/uniprot/I3Y7I8 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the aspartate-semialdehyde dehydrogenase family.|||Catalyzes the NADPH-dependent formation of L-aspartate-semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl-4-phosphate.|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS01930 ^@ http://purl.uniprot.org/uniprot/I3Y649 ^@ Similarity|||Subcellular Location Annotation ^@ Bacterial flagellum basal body|||Belongs to the flagella basal body rod proteins family. http://togogenome.org/gene/765911:THIVI_RS13060 ^@ http://purl.uniprot.org/uniprot/I3YC89 ^@ Similarity ^@ Belongs to the SIMIBI class G3E GTPase family. HypB/HupM subfamily. http://togogenome.org/gene/765911:THIVI_RS01080 ^@ http://purl.uniprot.org/uniprot/I3Y5M4 ^@ Function|||PTM|||Similarity|||Subcellular Location Annotation ^@ Belongs to the elongation factor P family.|||Cytoplasm|||Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation.|||May be beta-lysylated on the epsilon-amino group of Lys-34 by the combined action of EpmA and EpmB, and then hydroxylated on the C5 position of the same residue by EpmC (if this protein is present). Lysylation is critical for the stimulatory effect of EF-P on peptide-bond formation. The lysylation moiety may extend toward the peptidyltransferase center and stabilize the terminal 3-CCA end of the tRNA. Hydroxylation of the C5 position on Lys-34 may allow additional potential stabilizing hydrogen-bond interactions with the P-tRNA. http://togogenome.org/gene/765911:THIVI_RS16035 ^@ http://purl.uniprot.org/uniprot/I3YDW4 ^@ Cofactor|||Similarity ^@ Belongs to the ApbE family.|||Magnesium. Can also use manganese. http://togogenome.org/gene/765911:THIVI_RS13335 ^@ http://purl.uniprot.org/uniprot/I3YCE4 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.|||Binds 2 divalent metal cations per subunit. Has a high-affinity and a low affinity metal-binding site. The true nature of the physiological cofactor is under debate. The enzyme is active with cobalt, zinc, manganese or divalent iron ions. Most likely, methionine aminopeptidases function as mononuclear Fe(2+)-metalloproteases under physiological conditions, and the catalytically relevant metal-binding site has been assigned to the histidine-containing high-affinity site.|||Monomer.|||Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed. http://togogenome.org/gene/765911:THIVI_RS14870 ^@ http://purl.uniprot.org/uniprot/I3YD79 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the CcmF/CycK/Ccl1/NrfE/CcsA family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS15365 ^@ http://purl.uniprot.org/uniprot/I3YDH8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the RbfA family.|||Cytoplasm|||Monomer. Binds 30S ribosomal subunits, but not 50S ribosomal subunits or 70S ribosomes.|||One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. http://togogenome.org/gene/765911:THIVI_RS03055 ^@ http://purl.uniprot.org/uniprot/I3Y6R5 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the FKBP-type PPIase family. Tig subfamily.|||Consists of 3 domains; the N-terminus binds the ribosome, the middle domain has PPIase activity, while the C-terminus has intrinsic chaperone activity on its own.|||Cytoplasm|||Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase. http://togogenome.org/gene/765911:THIVI_RS05550 ^@ http://purl.uniprot.org/uniprot/I3Y851 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the AIR synthase family.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS21740 ^@ http://purl.uniprot.org/uniprot/I3YH25 ^@ Similarity ^@ Belongs to the glycosyl hydrolase 1 family. http://togogenome.org/gene/765911:THIVI_RS08060 ^@ http://purl.uniprot.org/uniprot/I3Y9H4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the arsenical resistance-3 (ACR3) (TC 2.A.59) family.|||Cell membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS04530 ^@ http://purl.uniprot.org/uniprot/I3Y7J5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ABC-4 integral membrane protein family. LolC/E subfamily.|||Membrane http://togogenome.org/gene/765911:THIVI_RS13735 ^@ http://purl.uniprot.org/uniprot/I3YCM6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the GSP F family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS15860 ^@ http://purl.uniprot.org/uniprot/I3YDS7 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bL33 family. http://togogenome.org/gene/765911:THIVI_RS05510 ^@ http://purl.uniprot.org/uniprot/I3Y843 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.|||Cell membrane|||Heterodimer of a large and a small subunit. http://togogenome.org/gene/765911:THIVI_RS12545 ^@ http://purl.uniprot.org/uniprot/I3YC05 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Binds 1 Mg(2+) ion per subunit.|||Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain.|||Cytoplasm|||Homotrimer.|||In the C-terminal section; belongs to the transferase hexapeptide repeat family.|||In the N-terminal section; belongs to the N-acetylglucosamine-1-phosphate uridyltransferase family. http://togogenome.org/gene/765911:THIVI_RS22110 ^@ http://purl.uniprot.org/uniprot/I3YH98 ^@ Function|||Similarity|||Subunit ^@ Belongs to the ClpS family.|||Binds to the N-terminal domain of the chaperone ClpA.|||Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation. http://togogenome.org/gene/765911:THIVI_RS17410 ^@ http://purl.uniprot.org/uniprot/I3YEN4 ^@ Similarity ^@ Belongs to the TrpC family. http://togogenome.org/gene/765911:THIVI_RS14425 ^@ http://purl.uniprot.org/uniprot/I3YCZ3 ^@ Similarity ^@ Belongs to the YkuD family. http://togogenome.org/gene/765911:THIVI_RS13875 ^@ http://purl.uniprot.org/uniprot/I3YCQ2 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.|||Binds 1 divalent metal cation per subunit. Can use either Co(2+) or Zn(2+).|||Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS13125 ^@ http://purl.uniprot.org/uniprot/I3YCA2 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.|||Cell membrane|||Heterodimer of a large and a small subunit. http://togogenome.org/gene/765911:THIVI_RS00025 ^@ http://purl.uniprot.org/uniprot/I3Y525 ^@ Cofactor|||Similarity ^@ Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.|||Binds 1 FAD per subunit. http://togogenome.org/gene/765911:THIVI_RS02765 ^@ http://purl.uniprot.org/uniprot/I3Y6K9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the BI1 family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS08595 ^@ http://purl.uniprot.org/uniprot/I3Y9T2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS06590 ^@ http://purl.uniprot.org/uniprot/I3Y8P8 ^@ Function ^@ The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane. http://togogenome.org/gene/765911:THIVI_RS12560 ^@ http://purl.uniprot.org/uniprot/I3YC08 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ATPase alpha/beta chains family. T3SS ATPase subfamily.|||Cell inner membrane|||F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has four main subunits: a(1), b(1), b'(1) and c(9-12).|||F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a(1), b(2) and c(9-12). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. CF(1) is attached to CF(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.|||Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. http://togogenome.org/gene/765911:THIVI_RS00805 ^@ http://purl.uniprot.org/uniprot/I3Y5H2 ^@ Similarity ^@ Belongs to the transglycosylase Slt family. http://togogenome.org/gene/765911:THIVI_RS14920 ^@ http://purl.uniprot.org/uniprot/I3YD89 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the thiamine-phosphate synthase family.|||Binds 1 Mg(2+) ion per subunit.|||Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). http://togogenome.org/gene/765911:THIVI_RS14745 ^@ http://purl.uniprot.org/uniprot/I3YD52 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the dCTP deaminase family.|||Catalyzes the deamination of dCTP to dUTP.|||Homotrimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS08920 ^@ http://purl.uniprot.org/uniprot/I3Y9Z6 ^@ Caution|||Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the bacterial diacylglycerol kinase family.|||Catalyzes the ATP-dependent phosphorylation of sn-l,2-diacylglycerol (DAG) to phosphatidic acid. Involved in the recycling of diacylglycerol produced as a by-product during membrane-derived oligosaccharide (MDO) biosynthesis.|||Cell inner membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane|||Mn(2+), Zn(2+), Cd(2+) and Co(2+) support activity to lesser extents. http://togogenome.org/gene/765911:THIVI_RS01450 ^@ http://purl.uniprot.org/uniprot/I3Y5V3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the cytidylate kinase family. Type 1 subfamily.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS19035 ^@ http://purl.uniprot.org/uniprot/I3YFK7 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.|||Cell membrane|||Heterodimer of a large and a small subunit. http://togogenome.org/gene/765911:THIVI_RS09080 ^@ http://purl.uniprot.org/uniprot/I3YA25 ^@ Similarity ^@ Belongs to the protease inhibitor I39 (alpha-2-macroglobulin) family. Bacterial alpha-2-macroglobulin subfamily. http://togogenome.org/gene/765911:THIVI_RS18685 ^@ http://purl.uniprot.org/uniprot/I3YFD6 ^@ Cofactor|||Similarity ^@ Belongs to the peptidase M3 family.|||Binds 1 zinc ion. http://togogenome.org/gene/765911:THIVI_RS20480 ^@ http://purl.uniprot.org/uniprot/I3YGD3 ^@ Function|||Similarity ^@ Belongs to the RuBisCO large chain family. Type II subfamily.|||RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. http://togogenome.org/gene/765911:THIVI_RS05605 ^@ http://purl.uniprot.org/uniprot/I3Y862 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the peptidase M50B family.|||Cell membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS20275 ^@ http://purl.uniprot.org/uniprot/I3YG91 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS12 family.|||Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.|||Part of the 30S ribosomal subunit. Contacts proteins S8 and S17. May interact with IF1 in the 30S initiation complex.|||With S4 and S5 plays an important role in translational accuracy. http://togogenome.org/gene/765911:THIVI_RS05060 ^@ http://purl.uniprot.org/uniprot/I3Y7V0 ^@ Caution|||Function|||Miscellaneous|||Similarity ^@ Belongs to the thiamine-monophosphate kinase family.|||Catalyzes the ATP-dependent phosphorylation of thiamine-monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Reaction mechanism of ThiL seems to utilize a direct, inline transfer of the gamma-phosphate of ATP to TMP rather than a phosphorylated enzyme intermediate. http://togogenome.org/gene/765911:THIVI_RS20530 ^@ http://purl.uniprot.org/uniprot/I3YGE3 ^@ Subcellular Location Annotation ^@ Cell inner membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS20330 ^@ http://purl.uniprot.org/uniprot/I3YGA2 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS3 family.|||Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation.|||Part of the 30S ribosomal subunit. Forms a tight complex with proteins S10 and S14. http://togogenome.org/gene/765911:THIVI_RS05190 ^@ http://purl.uniprot.org/uniprot/I3Y7X7 ^@ Subcellular Location Annotation ^@ Cytoplasm http://togogenome.org/gene/765911:THIVI_RS05780 ^@ http://purl.uniprot.org/uniprot/I3Y895 ^@ Function|||Similarity ^@ Belongs to the bacterial ribosomal protein bS6 family.|||Binds together with bS18 to 16S ribosomal RNA. http://togogenome.org/gene/765911:THIVI_RS04415 ^@ http://purl.uniprot.org/uniprot/I3Y7H2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS14155 ^@ http://purl.uniprot.org/uniprot/I3YCV2 ^@ Similarity ^@ Belongs to the spermidine/spermine synthase family. http://togogenome.org/gene/765911:THIVI_RS08480 ^@ http://purl.uniprot.org/uniprot/I3Y9Q9 ^@ Similarity ^@ Belongs to the AB hydrolase superfamily. AB hydrolase 4 family. http://togogenome.org/gene/765911:THIVI_RS09615 ^@ http://purl.uniprot.org/uniprot/I3YAD0 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the radical SAM superfamily. Lipoyl synthase family.|||Binds 2 [4Fe-4S] clusters per subunit. One cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.|||Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS22020 ^@ http://purl.uniprot.org/uniprot/I3YH82 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.|||Cell membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS25745 ^@ http://purl.uniprot.org/uniprot/I3YAT2 ^@ Subcellular Location Annotation ^@ Cell inner membrane http://togogenome.org/gene/765911:THIVI_RS01065 ^@ http://purl.uniprot.org/uniprot/I3Y5M1 ^@ Similarity ^@ Belongs to the ATPase alpha/beta chains family. T3SS ATPase subfamily. http://togogenome.org/gene/765911:THIVI_RS05110 ^@ http://purl.uniprot.org/uniprot/I3Y7W0 ^@ Cofactor|||Similarity|||Subcellular Location Annotation ^@ Belongs to the heme-copper respiratory oxidase family.|||Binds 1 copper ion per subunit, denoted as copper B.|||Binds 2 heme groups per subunit, denoted as high- and low-spin.|||Membrane http://togogenome.org/gene/765911:THIVI_RS08545 ^@ http://purl.uniprot.org/uniprot/I3Y9S2 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the dethiobiotin synthetase family.|||Catalyzes a mechanistically unusual reaction, the ATP-dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA, also called 7,8-diammoniononanoate) to form a ureido ring.|||Cytoplasm|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS18920 ^@ http://purl.uniprot.org/uniprot/I3YFI3 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I 49 kDa subunit family.|||Cell inner membrane|||NDH-1 is composed of 14 different subunits. Subunits NuoB, C, D, E, F, and G constitute the peripheral sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/765911:THIVI_RS09380 ^@ http://purl.uniprot.org/uniprot/I3YA79 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.|||Cell inner membrane http://togogenome.org/gene/765911:THIVI_RS05580 ^@ http://purl.uniprot.org/uniprot/I3Y857 ^@ Similarity ^@ Belongs to the metallophosphoesterase superfamily. YfcE family. http://togogenome.org/gene/765911:THIVI_RS05850 ^@ http://purl.uniprot.org/uniprot/I3Y8A6 ^@ Similarity ^@ Belongs to the PhoH family. http://togogenome.org/gene/765911:THIVI_RS08805 ^@ http://purl.uniprot.org/uniprot/I3Y9X2 ^@ Subcellular Location Annotation ^@ Cell inner membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS09060 ^@ http://purl.uniprot.org/uniprot/I3YA21 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS05285 ^@ http://purl.uniprot.org/uniprot/I3Y7Z8 ^@ Similarity ^@ Belongs to the UPF0051 (ycf24) family. http://togogenome.org/gene/765911:THIVI_RS12275 ^@ http://purl.uniprot.org/uniprot/I3YBV1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the PRA-PH family.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS02925 ^@ http://purl.uniprot.org/uniprot/I3Y6N9 ^@ Similarity ^@ Belongs to the sigma-70 factor family. ECF subfamily. http://togogenome.org/gene/765911:THIVI_RS15425 ^@ http://purl.uniprot.org/uniprot/I3YDJ0 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.|||Binds 2 [4Fe-4S] clusters per subunit.|||Cell inner membrane|||Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.|||The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG. http://togogenome.org/gene/765911:THIVI_RS06740 ^@ http://purl.uniprot.org/uniprot/I3Y8T1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the amino acid-polyamine-organocation (APC) superfamily. Basic amino acid/polyamine antiporter (APA) (TC 2.A.3.2) family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS08715 ^@ http://purl.uniprot.org/uniprot/I3Y9V3 ^@ Domain|||Similarity ^@ Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.|||The HXXXXD motif is essential for acyltransferase activity and may constitute the binding site for the phosphate moiety of the glycerol-3-phosphate. http://togogenome.org/gene/765911:THIVI_RS09495 ^@ http://purl.uniprot.org/uniprot/I3YAA4 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS17425 ^@ http://purl.uniprot.org/uniprot/I3YEN7 ^@ Cofactor|||Function|||PTM|||Similarity|||Subunit ^@ Belongs to the prokaryotic AdoMetDC family. Type 2 subfamily.|||Binds 1 pyruvoyl group covalently per subunit.|||Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine.|||Heterooctamer of four alpha and four beta chains arranged as a tetramer of alpha/beta heterodimers.|||Is synthesized initially as an inactive proenzyme. Formation of the active enzyme involves a self-maturation process in which the active site pyruvoyl group is generated from an internal serine residue via an autocatalytic post-translational modification. Two non-identical subunits are generated from the proenzyme in this reaction, and the pyruvate is formed at the N-terminus of the alpha chain, which is derived from the carboxyl end of the proenzyme. The post-translation cleavage follows an unusual pathway, termed non-hydrolytic serinolysis, in which the side chain hydroxyl group of the serine supplies its oxygen atom to form the C-terminus of the beta chain, while the remainder of the serine residue undergoes an oxidative deamination to produce ammonia and the pyruvoyl group blocking the N-terminus of the alpha chain. http://togogenome.org/gene/765911:THIVI_RS20870 ^@ http://purl.uniprot.org/uniprot/I3YGL1 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes.|||Belongs to the RimM family.|||Binds ribosomal protein uS19.|||Cytoplasm|||The PRC barrel domain binds ribosomal protein uS19. http://togogenome.org/gene/765911:THIVI_RS07560 ^@ http://purl.uniprot.org/uniprot/I3Y986 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the IF-3 family.|||Cytoplasm|||IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.|||Monomer. http://togogenome.org/gene/765911:THIVI_RS10530 ^@ http://purl.uniprot.org/uniprot/I3YAW0 ^@ Similarity ^@ Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. http://togogenome.org/gene/765911:THIVI_RS16675 ^@ http://purl.uniprot.org/uniprot/I3YE91 ^@ Similarity ^@ Belongs to the thiolase-like superfamily. Thiolase family. http://togogenome.org/gene/765911:THIVI_RS21965 ^@ http://purl.uniprot.org/uniprot/I3YH70 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the HflD family.|||Cell inner membrane|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS16000 ^@ http://purl.uniprot.org/uniprot/I3YDV7 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the RNA methyltransferase RsmE family.|||Cytoplasm|||Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. http://togogenome.org/gene/765911:THIVI_RS03600 ^@ http://purl.uniprot.org/uniprot/I3Y723 ^@ Function|||Similarity ^@ Belongs to the GlnE family.|||Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell. http://togogenome.org/gene/765911:THIVI_RS02420 ^@ http://purl.uniprot.org/uniprot/I3Y6E3 ^@ Similarity ^@ Belongs to the cyclic nucleotide phosphodiesterase class-III family. http://togogenome.org/gene/765911:THIVI_RS02975 ^@ http://purl.uniprot.org/uniprot/I3Y6P9 ^@ Function|||Similarity ^@ Belongs to the RecO family.|||Involved in DNA repair and RecF pathway recombination. http://togogenome.org/gene/765911:THIVI_RS05115 ^@ http://purl.uniprot.org/uniprot/I3Y7W1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the CPA3 antiporters (TC 2.A.63) subunit F family.|||Cell membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS18930 ^@ http://purl.uniprot.org/uniprot/I3YFI5 ^@ Function|||Similarity ^@ Belongs to the complex I 51 kDa subunit family.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. http://togogenome.org/gene/765911:THIVI_RS10415 ^@ http://purl.uniprot.org/uniprot/I3YAT7 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/765911:THIVI_RS20255 ^@ http://purl.uniprot.org/uniprot/I3YG87 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL10 family.|||Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.|||Part of the ribosomal stalk of the 50S ribosomal subunit. The N-terminus interacts with L11 and the large rRNA to form the base of the stalk. The C-terminus forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex. http://togogenome.org/gene/765911:THIVI_RS19360 ^@ http://purl.uniprot.org/uniprot/I3YFS2 ^@ Similarity ^@ Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. http://togogenome.org/gene/765911:THIVI_RS12580 ^@ http://purl.uniprot.org/uniprot/I3YC12 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ATPase B chain family.|||Cell inner membrane|||Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). The b'-subunit is a diverged and duplicated form of b found in plants and photosynthetic bacteria.|||F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.|||F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has three main subunits: a(1), b(2) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.|||Membrane http://togogenome.org/gene/765911:THIVI_RS16320 ^@ http://purl.uniprot.org/uniprot/I3YE18 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the polypeptide deformylase family.|||Binds 1 Fe(2+) ion.|||Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. http://togogenome.org/gene/765911:THIVI_RS15350 ^@ http://purl.uniprot.org/uniprot/I3YDH5 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the RimP family.|||Cytoplasm|||Required for maturation of 30S ribosomal subunits. http://togogenome.org/gene/765911:THIVI_RS01285 ^@ http://purl.uniprot.org/uniprot/I3Y5R6 ^@ Similarity ^@ Belongs to the OprB family. http://togogenome.org/gene/765911:THIVI_RS05055 ^@ http://purl.uniprot.org/uniprot/I3Y7U9 ^@ Function|||Similarity ^@ Belongs to the NusB family.|||Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. http://togogenome.org/gene/765911:THIVI_RS01330 ^@ http://purl.uniprot.org/uniprot/I3Y5S5 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.|||Belongs to the antenna complex beta subunit family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS01795 ^@ http://purl.uniprot.org/uniprot/I3Y623 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.|||Cell membrane|||Membrane|||Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin. http://togogenome.org/gene/765911:THIVI_RS16980 ^@ http://purl.uniprot.org/uniprot/I3YEF0 ^@ Similarity ^@ Belongs to the Vsr family. http://togogenome.org/gene/765911:THIVI_RS04470 ^@ http://purl.uniprot.org/uniprot/I3Y7I3 ^@ Function|||Similarity|||Subunit ^@ Belongs to the TrpA family.|||Tetramer of two alpha and two beta chains.|||The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. http://togogenome.org/gene/765911:THIVI_RS14730 ^@ http://purl.uniprot.org/uniprot/I3YD49 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS10835 ^@ http://purl.uniprot.org/uniprot/I3YB22 ^@ Subcellular Location Annotation ^@ Cytoplasm http://togogenome.org/gene/765911:THIVI_RS21990 ^@ http://purl.uniprot.org/uniprot/I3YH76 ^@ Cofactor|||Similarity ^@ Belongs to the peptidase M48 family.|||Binds 1 zinc ion per subunit. http://togogenome.org/gene/765911:THIVI_RS18145 ^@ http://purl.uniprot.org/uniprot/I3YF28 ^@ Function|||Similarity ^@ Belongs to the Fe(2+)-trafficking protein family.|||Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. http://togogenome.org/gene/765911:THIVI_RS20375 ^@ http://purl.uniprot.org/uniprot/I3YGB1 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL6 family.|||Part of the 50S ribosomal subunit.|||This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center. http://togogenome.org/gene/765911:THIVI_RS06820 ^@ http://purl.uniprot.org/uniprot/I3Y8U7 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the PAPS reductase family. CysH subfamily.|||Catalyzes the formation of sulfite from phosphoadenosine 5'-phosphosulfate (PAPS) using thioredoxin as an electron donor.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS09045 ^@ http://purl.uniprot.org/uniprot/I3YA18 ^@ Similarity ^@ Belongs to the asparagine synthetase family. http://togogenome.org/gene/765911:THIVI_RS16470 ^@ http://purl.uniprot.org/uniprot/I3YE49 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the NqrB/RnfD family.|||Cell inner membrane|||Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.|||The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG. http://togogenome.org/gene/765911:THIVI_RS19255 ^@ http://purl.uniprot.org/uniprot/I3YFQ1 ^@ Function|||Similarity ^@ Belongs to the ATPase alpha/beta chains family. T3SS ATPase subfamily.|||Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. http://togogenome.org/gene/765911:THIVI_RS20340 ^@ http://purl.uniprot.org/uniprot/I3YGA4 ^@ Similarity ^@ Belongs to the universal ribosomal protein uL29 family. http://togogenome.org/gene/765911:THIVI_RS16045 ^@ http://purl.uniprot.org/uniprot/I3YDW6 ^@ Similarity ^@ Belongs to the UPF0301 (AlgH) family. http://togogenome.org/gene/765911:THIVI_RS03390 ^@ http://purl.uniprot.org/uniprot/I3Y6Y2 ^@ Function|||Similarity ^@ Belongs to the SELO family.|||Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). http://togogenome.org/gene/765911:THIVI_RS18600 ^@ http://purl.uniprot.org/uniprot/I3YFB6 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the queuine tRNA-ribosyltransferase family.|||Binds 1 zinc ion per subunit.|||Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine).|||Homodimer. Within each dimer, one monomer is responsible for RNA recognition and catalysis, while the other monomer binds to the replacement base PreQ1. http://togogenome.org/gene/765911:THIVI_RS10250 ^@ http://purl.uniprot.org/uniprot/I3YAQ7 ^@ Similarity|||Subunit ^@ Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS02965 ^@ http://purl.uniprot.org/uniprot/I3Y6P7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ribonuclease III family.|||Cytoplasm|||Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS00245 ^@ http://purl.uniprot.org/uniprot/I3Y569 ^@ Similarity ^@ Belongs to the CapA family. http://togogenome.org/gene/765911:THIVI_RS07855 ^@ http://purl.uniprot.org/uniprot/I3Y9D9 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the ferrochelatase family.|||Catalyzes the ferrous insertion into protoporphyrin IX.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS08370 ^@ http://purl.uniprot.org/uniprot/I3Y9N6 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the ABC1 family. UbiB subfamily.|||Cell inner membrane|||Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS00445 ^@ http://purl.uniprot.org/uniprot/I3Y5A7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TatA/E family.|||Cell inner membrane|||Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.|||The Tat system comprises two distinct complexes: a TatABC complex, containing multiple copies of TatA, TatB and TatC subunits, and a separate TatA complex, containing only TatA subunits. Substrates initially bind to the TatABC complex, which probably triggers association of the separate TatA complex to form the active translocon. http://togogenome.org/gene/765911:THIVI_RS16160 ^@ http://purl.uniprot.org/uniprot/I3YDY9 ^@ Function|||Similarity|||Subunit ^@ Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily.|||Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS20305 ^@ http://purl.uniprot.org/uniprot/I3YG97 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL4 family.|||Forms part of the polypeptide exit tunnel.|||One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.|||Part of the 50S ribosomal subunit. http://togogenome.org/gene/765911:THIVI_RS15120 ^@ http://purl.uniprot.org/uniprot/I3YDD0 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.|||Belongs to the FliW family.|||Cytoplasm|||Interacts with translational regulator CsrA and flagellin(s). http://togogenome.org/gene/765911:THIVI_RS19920 ^@ http://purl.uniprot.org/uniprot/I3YG24 ^@ Domain|||Function|||PTM|||Similarity|||Subcellular Location Annotation ^@ Belongs to the CheB family.|||Contains a C-terminal catalytic domain, and an N-terminal region which modulates catalytic activity.|||Cytoplasm|||Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid.|||Phosphorylated by CheA. Phosphorylation of the N-terminal regulatory domain activates the methylesterase activity. http://togogenome.org/gene/765911:THIVI_RS16495 ^@ http://purl.uniprot.org/uniprot/I3YE54 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the methyltransferase superfamily. RlmKL family.|||Cytoplasm|||Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. http://togogenome.org/gene/765911:THIVI_RS01530 ^@ http://purl.uniprot.org/uniprot/I3Y5W9 ^@ Function ^@ Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. http://togogenome.org/gene/765911:THIVI_RS13500 ^@ http://purl.uniprot.org/uniprot/I3YCH7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.|||Cell inner membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS12300 ^@ http://purl.uniprot.org/uniprot/I3YBV6 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS05290 ^@ http://purl.uniprot.org/uniprot/I3Y7Z9 ^@ Similarity ^@ Belongs to the ABC transporter superfamily. Ycf16 family. http://togogenome.org/gene/765911:THIVI_RS11400 ^@ http://purl.uniprot.org/uniprot/I3YBD4 ^@ Subcellular Location Annotation ^@ Nucleus http://togogenome.org/gene/765911:THIVI_RS20190 ^@ http://purl.uniprot.org/uniprot/I3YG78 ^@ Function|||Similarity|||Subunit ^@ Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.|||Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA. Binds to the 5S rRNA independently of L5 and L18.|||This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. http://togogenome.org/gene/765911:THIVI_RS04795 ^@ http://purl.uniprot.org/uniprot/I3Y7Q1 ^@ Similarity ^@ Belongs to the DNA polymerase HolA subunit family. http://togogenome.org/gene/765911:THIVI_RS00195 ^@ http://purl.uniprot.org/uniprot/I3Y559 ^@ Similarity ^@ Belongs to the methyl-accepting chemotaxis (MCP) protein family. http://togogenome.org/gene/765911:THIVI_RS14550 ^@ http://purl.uniprot.org/uniprot/I3YD17 ^@ Function|||Similarity ^@ Belongs to the methyltransferase superfamily. RsmD family.|||Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle. http://togogenome.org/gene/765911:THIVI_RS16805 ^@ http://purl.uniprot.org/uniprot/I3YEB6 ^@ Similarity ^@ Belongs to the Mg-chelatase subunits D/I family. ComM subfamily. http://togogenome.org/gene/765911:THIVI_RS15055 ^@ http://purl.uniprot.org/uniprot/I3YDB7 ^@ Function|||Similarity ^@ Antitoxin component of a type II toxin-antitoxin (TA) system.|||Belongs to the phD/YefM antitoxin family. http://togogenome.org/gene/765911:THIVI_RS20390 ^@ http://purl.uniprot.org/uniprot/I3YGB4 ^@ Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL30 family.|||Part of the 50S ribosomal subunit. http://togogenome.org/gene/765911:THIVI_RS06790 ^@ http://purl.uniprot.org/uniprot/I3Y8U1 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family.|||Catalyzes the sodium-dependent transport of glutamate.|||Cell inner membrane http://togogenome.org/gene/765911:THIVI_RS08735 ^@ http://purl.uniprot.org/uniprot/I3Y9V8 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.|||Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS16825 ^@ http://purl.uniprot.org/uniprot/I3YEC0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ammonia transporter channel (TC 1.A.11.2) family.|||Cell membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS21100 ^@ http://purl.uniprot.org/uniprot/I3YGQ6 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the UvrC family.|||Cytoplasm|||Interacts with UvrB in an incision complex.|||The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. http://togogenome.org/gene/765911:THIVI_RS14780 ^@ http://purl.uniprot.org/uniprot/I3YD59 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.|||Cell inner membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS08375 ^@ http://purl.uniprot.org/uniprot/I3Y9N7 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the UbiJ family.|||Cytoplasm|||Required for ubiquinone (coenzyme Q) biosynthesis. Binds hydrophobic ubiquinone biosynthetic intermediates via its SCP2 domain and is essential for the stability of the Ubi complex. May constitute a docking platform where Ubi enzymes assemble and access their SCP2-bound polyprenyl substrates. http://togogenome.org/gene/765911:THIVI_RS03275 ^@ http://purl.uniprot.org/uniprot/I3Y6V8 ^@ Caution|||Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the RuvA family.|||Cytoplasm|||Has three domains with a flexible linker between the domains II and III and assumes an 'L' shape. Domain III is highly mobile and contacts RuvB.|||Homotetramer. Forms an RuvA(8)-RuvB(12)-Holliday junction (HJ) complex. HJ DNA is sandwiched between 2 RuvA tetramers; dsDNA enters through RuvA and exits via RuvB. An RuvB hexamer assembles on each DNA strand where it exits the tetramer. Each RuvB hexamer is contacted by two RuvA subunits (via domain III) on 2 adjacent RuvB subunits; this complex drives branch migration. In the full resolvosome a probable DNA-RuvA(4)-RuvB(12)-RuvC(2) complex forms which resolves the HJ.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||The RuvA-RuvB-RuvC complex processes Holliday junction (HJ) DNA during genetic recombination and DNA repair, while the RuvA-RuvB complex plays an important role in the rescue of blocked DNA replication forks via replication fork reversal (RFR). RuvA specifically binds to HJ cruciform DNA, conferring on it an open structure. The RuvB hexamer acts as an ATP-dependent pump, pulling dsDNA into and through the RuvAB complex. HJ branch migration allows RuvC to scan DNA until it finds its consensus sequence, where it cleaves and resolves the cruciform DNA. http://togogenome.org/gene/765911:THIVI_RS04815 ^@ http://purl.uniprot.org/uniprot/I3Y7Q5 ^@ Similarity ^@ Belongs to the ClpA/ClpB family. http://togogenome.org/gene/765911:THIVI_RS11035 ^@ http://purl.uniprot.org/uniprot/I3YB62 ^@ Similarity ^@ Belongs to the ClpA/ClpB family. http://togogenome.org/gene/765911:THIVI_RS03200 ^@ http://purl.uniprot.org/uniprot/I3Y6U2 ^@ Caution|||Cofactor|||Function|||Similarity ^@ Binds 1 Mg(2+) ion per subunit.|||Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.|||In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS04535 ^@ http://purl.uniprot.org/uniprot/I3Y7J6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ABC-4 integral membrane protein family. LolC/E subfamily.|||Membrane http://togogenome.org/gene/765911:THIVI_RS01165 ^@ http://purl.uniprot.org/uniprot/I3Y5P1 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the peptidase A24 family.|||Cell inner membrane|||Cell membrane|||Membrane|||Plays an essential role in type IV pili and type II pseudopili formation by proteolytically removing the leader sequence from substrate proteins and subsequently monomethylating the alpha-amino group of the newly exposed N-terminal phenylalanine. http://togogenome.org/gene/765911:THIVI_RS15355 ^@ http://purl.uniprot.org/uniprot/I3YDH6 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the NusA family.|||Cytoplasm|||Monomer. Binds directly to the core enzyme of the DNA-dependent RNA polymerase and to nascent RNA.|||Participates in both transcription termination and antitermination. http://togogenome.org/gene/765911:THIVI_RS06800 ^@ http://purl.uniprot.org/uniprot/I3Y8U3 ^@ Similarity|||Subunit ^@ Belongs to the glutaminase family.|||Homotetramer. http://togogenome.org/gene/765911:THIVI_RS04695 ^@ http://purl.uniprot.org/uniprot/I3Y7N0 ^@ Function|||Similarity ^@ Belongs to the NadD family.|||Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). http://togogenome.org/gene/765911:THIVI_RS06420 ^@ http://purl.uniprot.org/uniprot/I3Y8M1 ^@ Similarity ^@ Belongs to the peptidase S49 family. http://togogenome.org/gene/765911:THIVI_RS07265 ^@ http://purl.uniprot.org/uniprot/I3Y933 ^@ Caution|||Similarity|||Subcellular Location Annotation ^@ Belongs to the peptidase S26 family.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane http://togogenome.org/gene/765911:THIVI_RS20795 ^@ http://purl.uniprot.org/uniprot/I3YGJ7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the FtsK/SpoIIIE/SftA family.|||Essential cell division protein that coordinates cell division and chromosome segregation. The N-terminus is involved in assembly of the cell-division machinery. The C-terminus functions as a DNA motor that moves dsDNA in an ATP-dependent manner towards the dif recombination site, which is located within the replication terminus region. Translocation stops specifically at Xer-dif sites, where FtsK interacts with the Xer recombinase, allowing activation of chromosome unlinking by recombination. FtsK orienting polar sequences (KOPS) guide the direction of DNA translocation. FtsK can remove proteins from DNA as it translocates, but translocation stops specifically at XerCD-dif site, thereby preventing removal of XerC and XerD from dif.|||Homohexamer. Forms a ring that surrounds DNA.|||Membrane http://togogenome.org/gene/765911:THIVI_RS17565 ^@ http://purl.uniprot.org/uniprot/I3YER1 ^@ Function|||Similarity|||Subunit ^@ Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family.|||Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS18040 ^@ http://purl.uniprot.org/uniprot/I3YF02 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the 'phage' integrase family. XerD subfamily.|||Cytoplasm|||Forms a cyclic heterotetrameric complex composed of two molecules of XerC and two molecules of XerD.|||Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC-XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. http://togogenome.org/gene/765911:THIVI_RS11360 ^@ http://purl.uniprot.org/uniprot/I3YBC6 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the transketolase family.|||Binds 1 Mg(2+) ion per subunit. Can also utilize other divalent metal cations, such as Ca(2+), Mn(2+) and Co(2+).|||Binds 1 thiamine pyrophosphate per subunit.|||Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS02505 ^@ http://purl.uniprot.org/uniprot/I3Y6F9 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.|||Belongs to the RNR ribonuclease family. RNase R subfamily.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS18180 ^@ http://purl.uniprot.org/uniprot/I3YF34 ^@ Similarity ^@ Belongs to the peptidase A31 family. http://togogenome.org/gene/765911:THIVI_RS03015 ^@ http://purl.uniprot.org/uniprot/I3Y6Q7 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the heat shock protein 90 family.|||Cytoplasm|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Molecular chaperone. Has ATPase activity. http://togogenome.org/gene/765911:THIVI_RS07555 ^@ http://purl.uniprot.org/uniprot/I3Y985 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bL35 family. http://togogenome.org/gene/765911:THIVI_RS19065 ^@ http://purl.uniprot.org/uniprot/I3YFL2 ^@ Similarity ^@ Belongs to the site-specific recombinase resolvase family. http://togogenome.org/gene/765911:THIVI_RS17085 ^@ http://purl.uniprot.org/uniprot/I3YEH5 ^@ Similarity ^@ Belongs to the N(4)/N(6)-methyltransferase family. http://togogenome.org/gene/765911:THIVI_RS16280 ^@ http://purl.uniprot.org/uniprot/I3YE10 ^@ Function|||Similarity|||Subunit ^@ Belongs to the succinate/malate CoA ligase alpha subunit family.|||Heterotetramer of two alpha and two beta subunits.|||Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. http://togogenome.org/gene/765911:THIVI_RS13630 ^@ http://purl.uniprot.org/uniprot/I3YCK3 ^@ Similarity ^@ Belongs to the CbbQ/NirQ/NorQ/GpvN family. http://togogenome.org/gene/765911:THIVI_RS13270 ^@ http://purl.uniprot.org/uniprot/I3YCD1 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the NDK family.|||Cytoplasm|||Homotetramer.|||Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. http://togogenome.org/gene/765911:THIVI_RS01075 ^@ http://purl.uniprot.org/uniprot/I3Y5M3 ^@ Similarity ^@ Belongs to the radical SAM superfamily. KamA family. http://togogenome.org/gene/765911:THIVI_RS18940 ^@ http://purl.uniprot.org/uniprot/I3YFI7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I subunit 1 family.|||Cell inner membrane|||Cell membrane|||Membrane|||NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. http://togogenome.org/gene/765911:THIVI_RS06455 ^@ http://purl.uniprot.org/uniprot/I3Y8M7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.|||Cell membrane http://togogenome.org/gene/765911:THIVI_RS03135 ^@ http://purl.uniprot.org/uniprot/I3Y6S9 ^@ Similarity ^@ Belongs to the methyl-accepting chemotaxis (MCP) protein family. http://togogenome.org/gene/765911:THIVI_RS11530 ^@ http://purl.uniprot.org/uniprot/I3YBF9 ^@ Similarity ^@ Belongs to the HicA mRNA interferase family. http://togogenome.org/gene/765911:THIVI_RS15560 ^@ http://purl.uniprot.org/uniprot/I3YDL8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the NhaD Na(+)/H(+) (TC 2.A.62) antiporter family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS19510 ^@ http://purl.uniprot.org/uniprot/I3YFU2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ABC-2 integral membrane protein family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS03345 ^@ http://purl.uniprot.org/uniprot/I3Y6X2 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ A monovalent cation. Ammonium or potassium.|||Belongs to the type III pantothenate kinase family.|||Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS14380 ^@ http://purl.uniprot.org/uniprot/I3YCY4 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS03780 ^@ http://purl.uniprot.org/uniprot/I3Y757 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Bacterial flagellum|||Belongs to the FliD family.|||Homopentamer.|||Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.|||Secreted http://togogenome.org/gene/765911:THIVI_RS13105 ^@ http://purl.uniprot.org/uniprot/I3YC98 ^@ Similarity ^@ Belongs to the HupH/HyaF family. http://togogenome.org/gene/765911:THIVI_RS04095 ^@ http://purl.uniprot.org/uniprot/I3Y7A7 ^@ Similarity ^@ Belongs to the thioredoxin family. http://togogenome.org/gene/765911:THIVI_RS19725 ^@ http://purl.uniprot.org/uniprot/I3YFY8 ^@ Cofactor|||Domain|||Function|||Similarity|||Subunit ^@ Belongs to the DnaG primase family.|||Binds 1 zinc ion per monomer.|||Contains an N-terminal zinc-binding domain, a central core domain that contains the primase activity, and a C-terminal DnaB-binding domain.|||Monomer. Interacts with DnaB.|||RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. http://togogenome.org/gene/765911:THIVI_RS18250 ^@ http://purl.uniprot.org/uniprot/I3YF47 ^@ Function|||Similarity|||Subunit ^@ Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.|||Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-ketoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate).|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS11615 ^@ http://purl.uniprot.org/uniprot/I3YBH7 ^@ Cofactor|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the anaerobic coproporphyrinogen-III oxidase family.|||Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.|||Cytoplasm|||Monomer. http://togogenome.org/gene/765911:THIVI_RS16735 ^@ http://purl.uniprot.org/uniprot/I3YEA2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/765911:THIVI_RS21805 ^@ http://purl.uniprot.org/uniprot/G4DT07 ^@ Similarity ^@ Belongs to the transposase 11 family. http://togogenome.org/gene/765911:THIVI_RS15890 ^@ http://purl.uniprot.org/uniprot/I3YDT3 ^@ Similarity ^@ Belongs to the heat shock protein 70 family. http://togogenome.org/gene/765911:THIVI_RS18925 ^@ http://purl.uniprot.org/uniprot/I3YFI4 ^@ Cofactor|||Similarity ^@ Belongs to the complex I 24 kDa subunit family.|||Binds 1 [2Fe-2S] cluster. http://togogenome.org/gene/765911:THIVI_RS03070 ^@ http://purl.uniprot.org/uniprot/I3Y6R8 ^@ Function|||Induction|||Similarity|||Subcellular Location Annotation|||Subunit ^@ ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.|||Belongs to the peptidase S16 family.|||By heat shock.|||Cytoplasm|||Homohexamer. Organized in a ring with a central cavity. http://togogenome.org/gene/765911:THIVI_RS17725 ^@ http://purl.uniprot.org/uniprot/I3YEU1 ^@ Function|||Similarity ^@ Allosteric enzyme that catalyzes the rate-limiting step in glycogen catabolism, the phosphorolytic cleavage of glycogen to produce glucose-1-phosphate, and plays a central role in maintaining cellular and organismal glucose homeostasis.|||Belongs to the glycogen phosphorylase family.|||Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. http://togogenome.org/gene/765911:THIVI_RS08740 ^@ http://purl.uniprot.org/uniprot/I3Y9V9 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the peptidase M17 family.|||Binds 2 manganese ions per subunit.|||Cytoplasm|||Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides. http://togogenome.org/gene/765911:THIVI_RS14890 ^@ http://purl.uniprot.org/uniprot/I3YD83 ^@ Function|||Similarity ^@ Belongs to the carbamoyltransferase HypF family.|||Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. http://togogenome.org/gene/765911:THIVI_RS04805 ^@ http://purl.uniprot.org/uniprot/I3Y7Q3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the class-I aminoacyl-tRNA synthetase family.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS02920 ^@ http://purl.uniprot.org/uniprot/I3Y6N8 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the FAD-dependent oxidoreductase 2 family. NadB subfamily.|||Catalyzes the oxidation of L-aspartate to iminoaspartate.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS03550 ^@ http://purl.uniprot.org/uniprot/I3Y713 ^@ Similarity ^@ Belongs to the peptidase M1 family. http://togogenome.org/gene/765911:THIVI_RS19305 ^@ http://purl.uniprot.org/uniprot/I3YFR1 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the pyridoxamine 5'-phosphate oxidase family.|||Binds 1 FMN per subunit.|||Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS01920 ^@ http://purl.uniprot.org/uniprot/I3Y647 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Bacterial flagellum basal body|||Belongs to the flagella basal body rod proteins family.|||The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod. The rod consists of about 26 subunits of FlgG in the distal portion, and FlgB, FlgC and FlgF are thought to build up the proximal portion of the rod with about 6 subunits each. http://togogenome.org/gene/765911:THIVI_RS05265 ^@ http://purl.uniprot.org/uniprot/I3Y7Z2 ^@ Similarity ^@ In the N-terminal section; belongs to the CRISPR-associated nuclease Cas3-HD family.|||In the central section; belongs to the CRISPR-associated helicase Cas3 family. http://togogenome.org/gene/765911:THIVI_RS00895 ^@ http://purl.uniprot.org/uniprot/I3Y5I8 ^@ Similarity ^@ Belongs to the GSP E family. http://togogenome.org/gene/765911:THIVI_RS02315 ^@ http://purl.uniprot.org/uniprot/I3Y6C2 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the Lgt family.|||Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins.|||Cell inner membrane http://togogenome.org/gene/765911:THIVI_RS10720 ^@ http://purl.uniprot.org/uniprot/I3YAZ9 ^@ Similarity ^@ Belongs to the peptidase M20A family. ArgE subfamily. http://togogenome.org/gene/765911:THIVI_RS20200 ^@ http://purl.uniprot.org/uniprot/I3YG80 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the OmpP1/FadL family.|||Cell outer membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS07565 ^@ http://purl.uniprot.org/uniprot/I3Y987 ^@ Cofactor|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-II aminoacyl-tRNA synthetase family.|||Binds 1 zinc ion per subunit.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS20485 ^@ http://purl.uniprot.org/uniprot/I3YGD4 ^@ Subcellular Location Annotation ^@ Cell outer membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS07380 ^@ http://purl.uniprot.org/uniprot/I3Y953 ^@ Similarity ^@ Belongs to the N(4)/N(6)-methyltransferase family. http://togogenome.org/gene/765911:THIVI_RS08590 ^@ http://purl.uniprot.org/uniprot/I3Y9T1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the V-ATPase 116 kDa subunit family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS19825 ^@ http://purl.uniprot.org/uniprot/I3YG05 ^@ Similarity ^@ Belongs to the carbon-nitrogen hydrolase superfamily. NIT1/NIT2 family. http://togogenome.org/gene/765911:THIVI_RS13095 ^@ http://purl.uniprot.org/uniprot/I3YC96 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the dsrC/tusE family.|||Cytoplasm|||Part of a sulfur-relay system. http://togogenome.org/gene/765911:THIVI_RS14235 ^@ http://purl.uniprot.org/uniprot/I3YCW4 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the transaldolase family. Type 1 subfamily.|||Cytoplasm|||Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. http://togogenome.org/gene/765911:THIVI_RS00525 ^@ http://purl.uniprot.org/uniprot/I3Y5C2 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the GPI family.|||Catalyzes the reversible isomerization of glucose-6-phosphate to fructose-6-phosphate.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS11355 ^@ http://purl.uniprot.org/uniprot/I3YBC5 ^@ Similarity ^@ Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. http://togogenome.org/gene/765911:THIVI_RS13315 ^@ http://purl.uniprot.org/uniprot/I3YCE0 ^@ Function|||Similarity ^@ Belongs to the NifD/NifK/NifE/NifN family.|||This protein may play a role in the biosynthesis of the prosthetic group of nitrogenase (FeMo cofactor). http://togogenome.org/gene/765911:THIVI_RS15395 ^@ http://purl.uniprot.org/uniprot/I3YDI4 ^@ Function|||Similarity|||Subunit ^@ Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.|||Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.|||The complex is composed of two ATP-binding proteins (PotA), two transmembrane proteins (PotB and PotC) and a solute-binding protein (PotD). http://togogenome.org/gene/765911:THIVI_RS18915 ^@ http://purl.uniprot.org/uniprot/I3YFI2 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I 30 kDa subunit family.|||Cell inner membrane|||NDH-1 is composed of 14 different subunits. Subunits NuoB, C, D, E, F, and G constitute the peripheral sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/765911:THIVI_RS05980 ^@ http://purl.uniprot.org/uniprot/I3Y8D1 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site.|||Cytoplasm|||In the C-terminal section; belongs to the helicase family. RecG subfamily.|||In the N-terminal section; belongs to the UvrB family. http://togogenome.org/gene/765911:THIVI_RS02125 ^@ http://purl.uniprot.org/uniprot/I3Y690 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS19710 ^@ http://purl.uniprot.org/uniprot/I3YFY5 ^@ Caution|||Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the KAE1 / TsaD family.|||Binds 1 Fe(2+) ion per subunit.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction. http://togogenome.org/gene/765911:THIVI_RS05650 ^@ http://purl.uniprot.org/uniprot/I3Y871 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the exbB/tolQ family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS02860 ^@ http://purl.uniprot.org/uniprot/I3Y6M7 ^@ Similarity ^@ Belongs to the N(4)/N(6)-methyltransferase family. http://togogenome.org/gene/765911:THIVI_RS21000 ^@ http://purl.uniprot.org/uniprot/I3YGN7 ^@ Similarity ^@ Belongs to the SdhE FAD assembly factor family. http://togogenome.org/gene/765911:THIVI_RS04765 ^@ http://purl.uniprot.org/uniprot/I3Y7P5 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily. http://togogenome.org/gene/765911:THIVI_RS09570 ^@ http://purl.uniprot.org/uniprot/I3YAB8 ^@ Similarity ^@ Belongs to the PucC family. http://togogenome.org/gene/765911:THIVI_RS14510 ^@ http://purl.uniprot.org/uniprot/I3YD10 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS20920 ^@ http://purl.uniprot.org/uniprot/I3YGM0 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the BPG-independent phosphoglycerate mutase family.|||Binds 2 manganese ions per subunit.|||Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate.|||Monomer. http://togogenome.org/gene/765911:THIVI_RS19315 ^@ http://purl.uniprot.org/uniprot/I3YFR3 ^@ Function|||Similarity|||Subunit ^@ Belongs to the class II aldolase/RraA-like family.|||Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2-oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions.|||Homotrimer. http://togogenome.org/gene/765911:THIVI_RS02135 ^@ http://purl.uniprot.org/uniprot/I3Y692 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the UPF0073 (Hly-III) family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS14110 ^@ http://purl.uniprot.org/uniprot/I3YCU3 ^@ Cofactor|||Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation|||Subunit ^@ A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.|||Belongs to the type II topoisomerase GyrB family.|||Binds two Mg(2+) per subunit. The magnesium ions form salt bridges with both the protein and the DNA. Can also accept other divalent metal cations, such as Mn(2+) or Ca(2+).|||Cytoplasm|||Few gyrases are as efficient as E.coli at forming negative supercoils. Not all organisms have 2 type II topoisomerases; in organisms with a single type II topoisomerase this enzyme also has to decatenate newly replicated chromosomes.|||Heterotetramer, composed of two GyrA and two GyrB chains. In the heterotetramer, GyrA contains the active site tyrosine that forms a transient covalent intermediate with DNA, while GyrB binds cofactors and catalyzes ATP hydrolysis. http://togogenome.org/gene/765911:THIVI_RS00455 ^@ http://purl.uniprot.org/uniprot/I3Y5A9 ^@ PTM ^@ Binds 1 heme group per subunit. http://togogenome.org/gene/765911:THIVI_RS03065 ^@ http://purl.uniprot.org/uniprot/I3Y6R7 ^@ Function|||Similarity|||Subunit ^@ ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.|||Belongs to the ClpX chaperone family.|||Component of the ClpX-ClpP complex. Forms a hexameric ring that, in the presence of ATP, binds to fourteen ClpP subunits assembled into a disk-like structure with a central cavity, resembling the structure of eukaryotic proteasomes. http://togogenome.org/gene/765911:THIVI_RS13245 ^@ http://purl.uniprot.org/uniprot/I3YCC6 ^@ Similarity ^@ Belongs to the YfgM family. http://togogenome.org/gene/765911:THIVI_RS09100 ^@ http://purl.uniprot.org/uniprot/I3YA29 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS15720 ^@ http://purl.uniprot.org/uniprot/I3YDP9 ^@ Similarity ^@ Belongs to the PrpD family. http://togogenome.org/gene/765911:THIVI_RS22445 ^@ http://purl.uniprot.org/uniprot/I3Y655 ^@ Similarity|||Subcellular Location Annotation ^@ Bacterial flagellum|||Belongs to the flagella basal body rod proteins family.|||Secreted http://togogenome.org/gene/765911:THIVI_RS20745 ^@ http://purl.uniprot.org/uniprot/I3YGI7 ^@ Function|||Similarity|||Subunit ^@ Belongs to the NifW family.|||Homotrimer; associates with NifD.|||May protect the nitrogenase Fe-Mo protein from oxidative damage. http://togogenome.org/gene/765911:THIVI_RS03095 ^@ http://purl.uniprot.org/uniprot/I3Y6S1 ^@ Similarity ^@ Belongs to the ETF beta-subunit/FixA family. http://togogenome.org/gene/765911:THIVI_RS18405 ^@ http://purl.uniprot.org/uniprot/I3YF77 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the SoxA family.|||Binds 1 heme group per subunit.|||Binds 2 heme groups per subunit.|||C-type monoheme cytochrome, which is part of the SoxAX cytochrome complex involved in sulfur oxidation. The SoxAX complex catalyzes the formation of a heterodisulfide bond between the conserved cysteine residue on a sulfur carrier SoxYZ complex subunit SoxY and thiosulfate or other inorganic sulfur substrates. This leads to the intermediary formation of conspicuous sulfur globules inside of the cells.|||Heterodimer of SoxA and SoxX.|||Periplasm http://togogenome.org/gene/765911:THIVI_RS18885 ^@ http://purl.uniprot.org/uniprot/I3YFH7 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the SmpB family.|||Cytoplasm|||Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA; the nascent peptide is terminated with the 'tag peptide' encoded by the tmRNA and targeted for degradation. The ribosome is freed to recommence translation, which seems to be the essential function of trans-translation. http://togogenome.org/gene/765911:THIVI_RS20475 ^@ http://purl.uniprot.org/uniprot/I3YGD2 ^@ Similarity ^@ Belongs to the CbbQ/NirQ/NorQ/GpvN family. http://togogenome.org/gene/765911:THIVI_RS08895 ^@ http://purl.uniprot.org/uniprot/I3Y9Z1 ^@ Function|||Similarity|||Subunit ^@ Belongs to the GcvT family.|||The glycine cleavage system catalyzes the degradation of glycine.|||The glycine cleavage system is composed of four proteins: P, T, L and H. http://togogenome.org/gene/765911:THIVI_RS22225 ^@ http://purl.uniprot.org/uniprot/I3YHC2 ^@ Cofactor|||Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the DnaJ family.|||Binds 2 Zn(2+) ions per monomer.|||Cytoplasm|||Homodimer.|||Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.|||The J domain is necessary and sufficient to stimulate DnaK ATPase activity. Zinc center 1 plays an important role in the autonomous, DnaK-independent chaperone activity of DnaJ. Zinc center 2 is essential for interaction with DnaK and for DnaJ activity. http://togogenome.org/gene/765911:THIVI_RS02500 ^@ http://purl.uniprot.org/uniprot/I3Y6F8 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. RlmB subfamily.|||Cytoplasm|||Specifically methylates the ribose of guanosine 2251 in 23S rRNA. http://togogenome.org/gene/765911:THIVI_RS07450 ^@ http://purl.uniprot.org/uniprot/I3Y966 ^@ Similarity ^@ Belongs to the HsdR family. http://togogenome.org/gene/765911:THIVI_RS18225 ^@ http://purl.uniprot.org/uniprot/I3YF42 ^@ Function|||Similarity ^@ Belongs to the alanine racemase family.|||Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids. http://togogenome.org/gene/765911:THIVI_RS08945 ^@ http://purl.uniprot.org/uniprot/I3YA01 ^@ Function|||Similarity|||Subunit ^@ Belongs to the RlmJ family.|||Monomer.|||Specifically methylates the adenine in position 2030 of 23S rRNA. http://togogenome.org/gene/765911:THIVI_RS02295 ^@ http://purl.uniprot.org/uniprot/I3Y6B8 ^@ Function|||Similarity ^@ Belongs to the bacterial ribosomal protein bS20 family.|||Binds directly to 16S ribosomal RNA. http://togogenome.org/gene/765911:THIVI_RS05555 ^@ http://purl.uniprot.org/uniprot/I3Y852 ^@ Function|||Similarity ^@ Belongs to the GART family.|||Catalyzes the transfer of a formyl group from 10-formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. http://togogenome.org/gene/765911:THIVI_RS14055 ^@ http://purl.uniprot.org/uniprot/I3YCT3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the UPF0014 family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS05030 ^@ http://purl.uniprot.org/uniprot/I3Y7U4 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the NrdR family.|||Binds 1 zinc ion.|||Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR-boxes. http://togogenome.org/gene/765911:THIVI_RS13385 ^@ http://purl.uniprot.org/uniprot/I3YCF4 ^@ Similarity ^@ Belongs to the Skp family. http://togogenome.org/gene/765911:THIVI_RS15385 ^@ http://purl.uniprot.org/uniprot/I3YDI2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/765911:THIVI_RS20365 ^@ http://purl.uniprot.org/uniprot/I3YGA9 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS14 family.|||Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.|||Part of the 30S ribosomal subunit. Contacts proteins S3 and S10. http://togogenome.org/gene/765911:THIVI_RS22115 ^@ http://purl.uniprot.org/uniprot/I3YH99 ^@ Similarity ^@ Belongs to the ClpA/ClpB family. http://togogenome.org/gene/765911:THIVI_RS15715 ^@ http://purl.uniprot.org/uniprot/I3YDP8 ^@ Similarity ^@ Belongs to the citrate synthase family. http://togogenome.org/gene/765911:THIVI_RS00450 ^@ http://purl.uniprot.org/uniprot/I3Y5A8 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS04725 ^@ http://purl.uniprot.org/uniprot/I3Y7N7 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.|||Cell inner membrane|||Cell membrane|||Membrane|||Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane. http://togogenome.org/gene/765911:THIVI_RS04585 ^@ http://purl.uniprot.org/uniprot/I3Y7K6 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family.|||Cytoplasm|||Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. http://togogenome.org/gene/765911:THIVI_RS14835 ^@ http://purl.uniprot.org/uniprot/I3YD71 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the CcmC/CycZ/HelC family.|||Membrane|||Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes. http://togogenome.org/gene/765911:THIVI_RS02470 ^@ http://purl.uniprot.org/uniprot/I3Y6F2 ^@ Similarity ^@ Belongs to the YkuD family. http://togogenome.org/gene/765911:THIVI_RS08770 ^@ http://purl.uniprot.org/uniprot/I3Y9W5 ^@ Similarity ^@ Belongs to the Skp family. http://togogenome.org/gene/765911:THIVI_RS18440 ^@ http://purl.uniprot.org/uniprot/I3YF84 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS06325 ^@ http://purl.uniprot.org/uniprot/I3Y8K3 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS20050 ^@ http://purl.uniprot.org/uniprot/I3YG50 ^@ Similarity ^@ Belongs to the SAICAR synthetase family. http://togogenome.org/gene/765911:THIVI_RS22685 ^@ http://purl.uniprot.org/uniprot/I3Y9M6 ^@ Caution ^@ Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS19250 ^@ http://purl.uniprot.org/uniprot/I3YFQ0 ^@ Function|||Similarity ^@ Belongs to the APS kinase family.|||Catalyzes the synthesis of activated sulfate. http://togogenome.org/gene/765911:THIVI_RS11225 ^@ http://purl.uniprot.org/uniprot/I3YBA0 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the MurCDEF family.|||Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA).|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS21010 ^@ http://purl.uniprot.org/uniprot/I3YGN8 ^@ Similarity ^@ Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. http://togogenome.org/gene/765911:THIVI_RS13895 ^@ http://purl.uniprot.org/uniprot/I3YCQ6 ^@ Similarity ^@ Belongs to the GSP E family. http://togogenome.org/gene/765911:THIVI_RS19395 ^@ http://purl.uniprot.org/uniprot/I3YFS8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the drug/metabolite transporter (DMT) superfamily. Small multidrug resistance (SMR) (TC 2.A.7.1) family.|||Cell membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS01175 ^@ http://purl.uniprot.org/uniprot/I3Y5P3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the GSP E family.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS09355 ^@ http://purl.uniprot.org/uniprot/I3YA73 ^@ Caution|||Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.|||Binds 3 [4Fe-4S] clusters.|||Cell inner membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.|||The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG. http://togogenome.org/gene/765911:THIVI_RS01145 ^@ http://purl.uniprot.org/uniprot/I3Y5N7 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class II DHOase subfamily.|||Binds 2 Zn(2+) ions per subunit.|||Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS16945 ^@ http://purl.uniprot.org/uniprot/I3YEE3 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.|||Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner.|||Cytoplasm|||Monomer.|||The C-terminal coiled-coil domain is crucial for aminoacylation activity.|||ValRS has two distinct active sites: one for aminoacylation and one for editing. The misactivated threonine is translocated from the active site to the editing site. http://togogenome.org/gene/765911:THIVI_RS20410 ^@ http://purl.uniprot.org/uniprot/I3YGB9 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS11 family.|||Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome.|||Part of the 30S ribosomal subunit. Interacts with proteins S7 and S18. Binds to IF-3. http://togogenome.org/gene/765911:THIVI_RS17450 ^@ http://purl.uniprot.org/uniprot/I3YEP2 ^@ Similarity ^@ Belongs to the universal ribosomal protein uS9 family. http://togogenome.org/gene/765911:THIVI_RS05005 ^@ http://purl.uniprot.org/uniprot/I3Y7T9 ^@ Cofactor|||Similarity ^@ Belongs to the Nudix hydrolase family.|||Binds 1 Mg(2+) ion per subunit. http://togogenome.org/gene/765911:THIVI_RS20915 ^@ http://purl.uniprot.org/uniprot/I3YGL9 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.|||Homotetramer.|||Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS16085 ^@ http://purl.uniprot.org/uniprot/I3YDX4 ^@ Function|||Similarity ^@ Belongs to the AIR carboxylase family. Class I subfamily.|||Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). http://togogenome.org/gene/765911:THIVI_RS18190 ^@ http://purl.uniprot.org/uniprot/I3YF36 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.|||Cell membrane|||Heterodimer of a large and a small subunit. http://togogenome.org/gene/765911:THIVI_RS13830 ^@ http://purl.uniprot.org/uniprot/I3YCP4 ^@ Similarity ^@ Belongs to the citrate synthase family. http://togogenome.org/gene/765911:THIVI_RS06215 ^@ http://purl.uniprot.org/uniprot/I3Y8I4 ^@ Similarity ^@ Belongs to the YciI family. http://togogenome.org/gene/765911:THIVI_RS01535 ^@ http://purl.uniprot.org/uniprot/I3Y5X0 ^@ Function|||Similarity ^@ Belongs to the CheD family.|||Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis. http://togogenome.org/gene/765911:THIVI_RS08600 ^@ http://purl.uniprot.org/uniprot/I3Y9T3 ^@ Similarity ^@ Belongs to the V-ATPase F subunit family. http://togogenome.org/gene/765911:THIVI_RS02030 ^@ http://purl.uniprot.org/uniprot/I3Y669 ^@ Similarity ^@ Belongs to the methyl-accepting chemotaxis (MCP) protein family. http://togogenome.org/gene/765911:THIVI_RS01225 ^@ http://purl.uniprot.org/uniprot/I3Y5Q3 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS03680 ^@ http://purl.uniprot.org/uniprot/I3Y738 ^@ Caution|||Function|||Similarity ^@ Belongs to the methyltransferase superfamily. UbiG/COQ3 family.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway. http://togogenome.org/gene/765911:THIVI_RS21030 ^@ http://purl.uniprot.org/uniprot/I3YGP2 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the cytochrome b560 family.|||Membrane|||Membrane-anchoring subunit of succinate dehydrogenase (SDH).|||Part of an enzyme complex containing four subunits: a flavoprotein, an iron-sulfur protein, plus two membrane-anchoring proteins, SdhC and SdhD. The complex can form homotrimers.|||The heme is bound between the two transmembrane subunits. http://togogenome.org/gene/765911:THIVI_RS14590 ^@ http://purl.uniprot.org/uniprot/I3YD26 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the OXA1/ALB3/YidC family. Type 1 subfamily.|||Cell inner membrane|||Interacts with the Sec translocase complex via SecD. Specifically interacts with transmembrane segments of nascent integral membrane proteins during membrane integration.|||Membrane|||Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. http://togogenome.org/gene/765911:THIVI_RS10265 ^@ http://purl.uniprot.org/uniprot/I3YAR0 ^@ Function|||Similarity ^@ Belongs to the radical SAM superfamily. NifB family.|||Involved in the biosynthesis of the iron-molybdenum cofactor (FeMo-co or M-cluster) found in the dinitrogenase enzyme of the nitrogenase complex in nitrogen-fixing microorganisms. NifB catalyzes the crucial step of radical SAM-dependent carbide insertion that occurs concomitant with the insertion of a 9th sulfur and the rearrangement/coupling of two [4Fe-4S] clusters into a [8Fe-9S-C] cluster, the precursor to the M-cluster. http://togogenome.org/gene/765911:THIVI_RS18255 ^@ http://purl.uniprot.org/uniprot/I3YF48 ^@ Similarity ^@ Belongs to the uracil-DNA glycosylase (UDG) superfamily. Type 4 (UDGa) family. http://togogenome.org/gene/765911:THIVI_RS03560 ^@ http://purl.uniprot.org/uniprot/I3Y715 ^@ Similarity ^@ Belongs to the HSP15 family. http://togogenome.org/gene/765911:THIVI_RS07470 ^@ http://purl.uniprot.org/uniprot/I3Y969 ^@ Similarity ^@ Belongs to the type-I restriction system S methylase family. http://togogenome.org/gene/765911:THIVI_RS09590 ^@ http://purl.uniprot.org/uniprot/I3YAC5 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.|||Belongs to the antenna complex beta subunit family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS08935 ^@ http://purl.uniprot.org/uniprot/I3Y9Z9 ^@ Function|||Similarity ^@ Belongs to the Mg-chelatase subunits D/I family.|||Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. http://togogenome.org/gene/765911:THIVI_RS14700 ^@ http://purl.uniprot.org/uniprot/I3YD43 ^@ Similarity ^@ Belongs to the pirin family. http://togogenome.org/gene/765911:THIVI_RS17285 ^@ http://purl.uniprot.org/uniprot/I3YEL2 ^@ Activity Regulation|||Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily.|||Cell inner membrane|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane|||Requires K(+) for maximal activity.|||Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. http://togogenome.org/gene/765911:THIVI_RS08610 ^@ http://purl.uniprot.org/uniprot/I3Y9T5 ^@ Function|||Similarity ^@ Belongs to the ATPase alpha/beta chains family. T3SS ATPase subfamily.|||Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. http://togogenome.org/gene/765911:THIVI_RS06720 ^@ http://purl.uniprot.org/uniprot/I3Y8S6 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS05045 ^@ http://purl.uniprot.org/uniprot/I3Y7U7 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the DHBP synthase family.|||Binds 2 divalent metal cations per subunit. Magnesium or manganese.|||Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.|||Homodimer.|||In the C-terminal section; belongs to the GTP cyclohydrolase II family.|||In the N-terminal section; belongs to the DHBP synthase family. http://togogenome.org/gene/765911:THIVI_RS13950 ^@ http://purl.uniprot.org/uniprot/I3YCR7 ^@ Similarity ^@ Belongs to the N(4)/N(6)-methyltransferase family. http://togogenome.org/gene/765911:THIVI_RS00090 ^@ http://purl.uniprot.org/uniprot/I3Y538 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bL32 family. http://togogenome.org/gene/765911:THIVI_RS19175 ^@ http://purl.uniprot.org/uniprot/I3YFN4 ^@ Function|||Subunit ^@ DNA polymerase III contains a core (composed of alpha, epsilon and theta chains) that associates with a tau subunit. This core dimerizes to form the POLIII' complex. PolIII' associates with the gamma complex (composed of gamma, delta, delta', psi and chi chains) and with the beta chain to form the complete DNA polymerase III complex.|||DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease. http://togogenome.org/gene/765911:THIVI_RS00350 ^@ http://purl.uniprot.org/uniprot/I3Y588 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the NqrDE/RnfAE family.|||Cell inner membrane|||Membrane|||Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.|||The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG. http://togogenome.org/gene/765911:THIVI_RS09660 ^@ http://purl.uniprot.org/uniprot/U3GJJ5 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the reaction center PufL/M/PsbA/D family.|||Membrane|||The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. http://togogenome.org/gene/765911:THIVI_RS08585 ^@ http://purl.uniprot.org/uniprot/I3Y9T0 ^@ Similarity ^@ Belongs to the V-ATPase V0D/AC39 subunit family. http://togogenome.org/gene/765911:THIVI_RS08260 ^@ http://purl.uniprot.org/uniprot/I3Y9L4 ^@ Function|||Similarity ^@ Belongs to the CobB/CobQ family. CobQ subfamily.|||Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. http://togogenome.org/gene/765911:THIVI_RS22230 ^@ http://purl.uniprot.org/uniprot/I3YHC3 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the DapB family.|||Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate.|||Cytoplasm|||Homotetramer.|||Was originally thought to be a dihydrodipicolinate reductase (DHDPR), catalyzing the conversion of dihydrodipicolinate to tetrahydrodipicolinate. However, it was shown in E.coli that the substrate of the enzymatic reaction is not dihydrodipicolinate (DHDP) but in fact (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinic acid (HTPA), the product released by the DapA-catalyzed reaction. http://togogenome.org/gene/765911:THIVI_RS21040 ^@ http://purl.uniprot.org/uniprot/I3YGP4 ^@ Function|||Similarity|||Subunit ^@ Belongs to the type II topoisomerase GyrB family.|||Belongs to the type II topoisomerase family. ParE type 1 subfamily.|||Heterotetramer composed of ParC and ParE.|||Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule. http://togogenome.org/gene/765911:THIVI_RS21070 ^@ http://purl.uniprot.org/uniprot/I3YGQ0 ^@ Similarity ^@ Belongs to the HupF/HypC family. http://togogenome.org/gene/765911:THIVI_RS01765 ^@ http://purl.uniprot.org/uniprot/I3Y617 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Bacterial flagellum basal body|||Belongs to the FliN/MopA/SpaO family.|||Cell membrane|||FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.|||Membrane http://togogenome.org/gene/765911:THIVI_RS12150 ^@ http://purl.uniprot.org/uniprot/I3YBS6 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the DEAD box helicase family. RhlB subfamily.|||Component of the RNA degradosome, which is a multiprotein complex involved in RNA processing and mRNA degradation.|||Cytoplasm|||DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA. http://togogenome.org/gene/765911:THIVI_RS11210 ^@ http://purl.uniprot.org/uniprot/I3YB97 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the MurCDEF family.|||Cell wall formation.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS06130 ^@ http://purl.uniprot.org/uniprot/I3Y8G7 ^@ Function|||Similarity|||Subunit ^@ Belongs to the peptidase U32 family. UbiU subfamily.|||Forms an heterodimer with UbiV.|||Required for O(2)-independent ubiquinone (coenzyme Q) biosynthesis. Together with UbiV, is essential for the C6-hydroxylation reaction in the oxygen-independent ubiquinone biosynthesis pathway. http://togogenome.org/gene/765911:THIVI_RS02955 ^@ http://purl.uniprot.org/uniprot/I3Y6P5 ^@ Caution|||Similarity|||Subcellular Location Annotation ^@ Belongs to the peptidase S26 family.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane http://togogenome.org/gene/765911:THIVI_RS16070 ^@ http://purl.uniprot.org/uniprot/I3YDX1 ^@ Similarity ^@ Belongs to the GSP E family. http://togogenome.org/gene/765911:THIVI_RS06885 ^@ http://purl.uniprot.org/uniprot/I3Y8W0 ^@ Similarity ^@ Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. http://togogenome.org/gene/765911:THIVI_RS01755 ^@ http://purl.uniprot.org/uniprot/I3Y615 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the FliL family.|||Cell inner membrane|||Controls the rotational direction of flagella during chemotaxis.|||Membrane http://togogenome.org/gene/765911:THIVI_RS18560 ^@ http://purl.uniprot.org/uniprot/I3YFA8 ^@ Similarity ^@ Belongs to the UPF0250 family. http://togogenome.org/gene/765911:THIVI_RS20195 ^@ http://purl.uniprot.org/uniprot/I3YG79 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PTH family.|||Cytoplasm|||Monomer.|||The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. http://togogenome.org/gene/765911:THIVI_RS05855 ^@ http://purl.uniprot.org/uniprot/I3Y8A7 ^@ Similarity ^@ Belongs to the cysteine synthase/cystathionine beta-synthase family. http://togogenome.org/gene/765911:THIVI_RS09800 ^@ http://purl.uniprot.org/uniprot/I3YAH0 ^@ Similarity ^@ Belongs to the DEAD box helicase family. http://togogenome.org/gene/765911:THIVI_RS03640 ^@ http://purl.uniprot.org/uniprot/I3Y730 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the RecA family.|||Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS16465 ^@ http://purl.uniprot.org/uniprot/I3YE48 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.|||Binds 2 [4Fe-4S] clusters per subunit.|||Cell inner membrane|||Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.|||The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG. http://togogenome.org/gene/765911:THIVI_RS03540 ^@ http://purl.uniprot.org/uniprot/I3Y711 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the LptF/LptG family.|||Cell inner membrane|||Component of the lipopolysaccharide transport and assembly complex. The LptBFG transporter is composed of two ATP-binding proteins (LptB) and two transmembrane proteins (LptF and LptG).|||Membrane|||Part of the ABC transporter complex LptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane. http://togogenome.org/gene/765911:THIVI_RS16305 ^@ http://purl.uniprot.org/uniprot/I3YE15 ^@ Function|||Similarity ^@ Belongs to the pseudouridine synthase RluA family.|||Responsible for synthesis of pseudouridine from uracil. http://togogenome.org/gene/765911:THIVI_RS18570 ^@ http://purl.uniprot.org/uniprot/I3YFB0 ^@ Function|||Similarity ^@ Belongs to the CowN family.|||Is required to sustain N(2)-dependent growth in the presence of low levels of carbon monoxide (CO). Probably acts by protecting the N(2) fixation ability of the nitrogenase complex, which is inactivated in the presence of CO. http://togogenome.org/gene/765911:THIVI_RS15650 ^@ http://purl.uniprot.org/uniprot/I3YDN7 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ATP phosphoribosyltransferase family. Short subfamily.|||Catalyzes the condensation of ATP and 5-phosphoribose 1-diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity.|||Cytoplasm|||Heteromultimer composed of HisG and HisZ subunits.|||Lacks the C-terminal regulatory region which is replaced by HisZ. http://togogenome.org/gene/765911:THIVI_RS15405 ^@ http://purl.uniprot.org/uniprot/I3YDI6 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the HisA/HisF family.|||Cytoplasm|||Heterodimer of HisH and HisF.|||IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.|||IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. http://togogenome.org/gene/765911:THIVI_RS04565 ^@ http://purl.uniprot.org/uniprot/I3Y7K2 ^@ Similarity ^@ Belongs to the ribosome association toxin RatA family. http://togogenome.org/gene/765911:THIVI_RS22155 ^@ http://purl.uniprot.org/uniprot/I3YHA8 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS16340 ^@ http://purl.uniprot.org/uniprot/I3YE22 ^@ Cofactor|||Similarity ^@ Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.|||Binds 1 FAD per subunit. http://togogenome.org/gene/765911:THIVI_RS03335 ^@ http://purl.uniprot.org/uniprot/I3Y6X0 ^@ Function|||Similarity ^@ Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon.|||Belongs to the biotin--protein ligase family. http://togogenome.org/gene/765911:THIVI_RS09480 ^@ http://purl.uniprot.org/uniprot/I3YAA1 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.|||Cell inner membrane|||Membrane|||Probable transporter of a GTP-driven Fe(2+) uptake system. http://togogenome.org/gene/765911:THIVI_RS11335 ^@ http://purl.uniprot.org/uniprot/I3YBC2 ^@ Caution|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the phosphoglycerate kinase family.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer. http://togogenome.org/gene/765911:THIVI_RS03535 ^@ http://purl.uniprot.org/uniprot/I3Y710 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ABC-4 integral membrane protein family. LolC/E subfamily.|||Membrane http://togogenome.org/gene/765911:THIVI_RS04905 ^@ http://purl.uniprot.org/uniprot/I3Y7R9 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 1 subfamily.|||Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys-tRNA(Pro) is not edited by ProRS.|||Consists of three domains: the N-terminal catalytic domain, the editing domain and the C-terminal anticodon-binding domain.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS20025 ^@ http://purl.uniprot.org/uniprot/I3YG45 ^@ Caution|||Cofactor|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the FBPase class 1 family.|||Binds 2 magnesium ions per subunit.|||Cytoplasm|||Homotetramer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS22055 ^@ http://purl.uniprot.org/uniprot/I3YH88 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the DsrC/TusE family.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS16110 ^@ http://purl.uniprot.org/uniprot/I3YDX9 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the guanylate kinase family.|||Cytoplasm|||Essential for recycling GMP and indirectly, cGMP. http://togogenome.org/gene/765911:THIVI_RS10440 ^@ http://purl.uniprot.org/uniprot/I3YAU2 ^@ Similarity ^@ Belongs to the sulfur carrier protein TusA family. http://togogenome.org/gene/765911:THIVI_RS05985 ^@ http://purl.uniprot.org/uniprot/I3Y8D2 ^@ Similarity ^@ Belongs to the UPF0175 family. http://togogenome.org/gene/765911:THIVI_RS10575 ^@ http://purl.uniprot.org/uniprot/I3YAX0 ^@ Similarity ^@ Belongs to the peptidase S49 family. http://togogenome.org/gene/765911:THIVI_RS05670 ^@ http://purl.uniprot.org/uniprot/I3Y875 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the dsrC/tusE family.|||Cytoplasm|||Part of a sulfur-relay system. http://togogenome.org/gene/765911:THIVI_RS13185 ^@ http://purl.uniprot.org/uniprot/I3YCB4 ^@ Function|||Similarity|||Subunit ^@ Belongs to the DnaX/STICHEL family.|||DNA polymerase III contains a core (composed of alpha, epsilon and theta chains) that associates with a tau subunit. This core dimerizes to form the POLIII' complex. PolIII' associates with the gamma complex (composed of gamma, delta, delta', psi and chi chains) and with the beta chain to form the complete DNA polymerase III complex.|||DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. http://togogenome.org/gene/765911:THIVI_RS14980 ^@ http://purl.uniprot.org/uniprot/I3YDA1 ^@ Similarity|||Subunit ^@ Belongs to the ALAD family.|||Homooctamer. http://togogenome.org/gene/765911:THIVI_RS03885 ^@ http://purl.uniprot.org/uniprot/I3Y772 ^@ Caution|||Similarity ^@ Belongs to the spermidine/spermine synthase family.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS09070 ^@ http://purl.uniprot.org/uniprot/I3YA23 ^@ Similarity ^@ Belongs to the UPF0175 family. http://togogenome.org/gene/765911:THIVI_RS20840 ^@ http://purl.uniprot.org/uniprot/I3YGK4 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS17305 ^@ http://purl.uniprot.org/uniprot/I3YEL6 ^@ Function|||Similarity|||Subunit ^@ Belongs to the class I-like SAM-binding methyltransferase superfamily. Cx-SAM synthase family.|||Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM).|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS09720 ^@ http://purl.uniprot.org/uniprot/I3YAF4 ^@ Similarity ^@ Belongs to the carotenoid/retinoid oxidoreductase family. http://togogenome.org/gene/765911:THIVI_RS19010 ^@ http://purl.uniprot.org/uniprot/I3YFK2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the HupC/HyaC/HydC family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS10030 ^@ http://purl.uniprot.org/uniprot/I3YAL5 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the SIMIBI class G3E GTPase family. UreG subfamily.|||Cytoplasm|||Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.|||Homodimer. UreD, UreF and UreG form a complex that acts as a GTP-hydrolysis-dependent molecular chaperone, activating the urease apoprotein by helping to assemble the nickel containing metallocenter of UreC. The UreE protein probably delivers the nickel. http://togogenome.org/gene/765911:THIVI_RS19440 ^@ http://purl.uniprot.org/uniprot/I3YFT6 ^@ Similarity ^@ Belongs to the trans-sulfuration enzymes family. http://togogenome.org/gene/765911:THIVI_RS20815 ^@ http://purl.uniprot.org/uniprot/I3YGK1 ^@ Similarity ^@ Belongs to the KAE1 / TsaD family. TsaB subfamily. http://togogenome.org/gene/765911:THIVI_RS18845 ^@ http://purl.uniprot.org/uniprot/I3YFH0 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the DNA gyrase inhibitor YacG family.|||Binds 1 zinc ion.|||Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase.|||Interacts with GyrB. http://togogenome.org/gene/765911:THIVI_RS13860 ^@ http://purl.uniprot.org/uniprot/I3YCQ0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the bacterial secretin family. PilQ subfamily.|||Cell outer membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS20270 ^@ http://purl.uniprot.org/uniprot/I3YG90 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the RNA polymerase beta' chain family.|||Binds 1 Mg(2+) ion per subunit.|||Binds 2 Zn(2+) ions per subunit.|||DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.|||The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription. http://togogenome.org/gene/765911:THIVI_RS11160 ^@ http://purl.uniprot.org/uniprot/I3YB87 ^@ Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ArgJ family.|||Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate.|||Cytoplasm|||Heterotetramer of two alpha and two beta chains.|||Some bacteria possess a monofunctional ArgJ, i.e., capable of catalyzing only the fifth step of the arginine biosynthetic pathway. http://togogenome.org/gene/765911:THIVI_RS19800 ^@ http://purl.uniprot.org/uniprot/I3YG00 ^@ Similarity ^@ Belongs to the aspartate/glutamate racemases family. http://togogenome.org/gene/765911:THIVI_RS10945 ^@ http://purl.uniprot.org/uniprot/I3YB44 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the XseA family.|||Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.|||Cytoplasm|||Heterooligomer composed of large and small subunits. http://togogenome.org/gene/765911:THIVI_RS16755 ^@ http://purl.uniprot.org/uniprot/I3YEA6 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the ThiC family.|||Binds 1 [4Fe-4S] cluster per subunit. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.|||Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS20380 ^@ http://purl.uniprot.org/uniprot/I3YGB2 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL18 family.|||Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S and 23S rRNAs.|||This is one of the proteins that bind and probably mediate the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. http://togogenome.org/gene/765911:THIVI_RS08835 ^@ http://purl.uniprot.org/uniprot/I3Y9X8 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-insensitive subfamily.|||Cell inner membrane|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane|||Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force. http://togogenome.org/gene/765911:THIVI_RS24225 ^@ http://purl.uniprot.org/uniprot/I3Y7K4 ^@ Cofactor|||Function|||PTM|||Similarity ^@ Activated by phosphorylation.|||Belongs to the phosphohexose mutase family.|||Binds 1 Mg(2+) ion per subunit.|||Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate. http://togogenome.org/gene/765911:THIVI_RS21640 ^@ http://purl.uniprot.org/uniprot/I3YH06 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the TmcA family.|||Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP).|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||nucleolus http://togogenome.org/gene/765911:THIVI_RS10800 ^@ http://purl.uniprot.org/uniprot/I3YB14 ^@ Function|||Similarity ^@ Belongs to the ABC transporter superfamily. Outer membrane lipopolysaccharide export (TC 1.B.42) family.|||Part of the ABC transporter complex LptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane. Probably responsible for energy coupling to the transport system. http://togogenome.org/gene/765911:THIVI_RS17330 ^@ http://purl.uniprot.org/uniprot/I3YEM0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the MscS (TC 1.A.23) family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS04475 ^@ http://purl.uniprot.org/uniprot/I3Y7I4 ^@ Function|||Similarity|||Subunit ^@ Belongs to the TrpB family.|||Tetramer of two alpha and two beta chains.|||The beta subunit is responsible for the synthesis of L-tryptophan from indole and L-serine. http://togogenome.org/gene/765911:THIVI_RS04370 ^@ http://purl.uniprot.org/uniprot/I3Y7G3 ^@ Similarity ^@ Belongs to the sulfate adenylyltransferase family. http://togogenome.org/gene/765911:THIVI_RS18170 ^@ http://purl.uniprot.org/uniprot/I3YF32 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the DEAD box helicase family. DeaD/CsdA subfamily.|||Cytoplasm|||DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. http://togogenome.org/gene/765911:THIVI_RS04950 ^@ http://purl.uniprot.org/uniprot/I3Y7S8 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the CobD/CbiB family.|||Cell membrane|||Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane http://togogenome.org/gene/765911:THIVI_RS01745 ^@ http://purl.uniprot.org/uniprot/I3Y613 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the FliJ family.|||Cell membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS16830 ^@ http://purl.uniprot.org/uniprot/I3YEC1 ^@ Function|||Similarity|||Subunit ^@ Belongs to the spermidine/spermine synthase family.|||Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.|||Homodimer or homotetramer. http://togogenome.org/gene/765911:THIVI_RS08080 ^@ http://purl.uniprot.org/uniprot/I3Y9H8 ^@ Function|||Similarity ^@ Belongs to the CobT family.|||Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). http://togogenome.org/gene/765911:THIVI_RS11230 ^@ http://purl.uniprot.org/uniprot/I3YBA1 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the glycosyltransferase 4 family. MraY subfamily.|||Catalyzes the initial step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan: transfers peptidoglycan precursor phospho-MurNAc-pentapeptide from UDP-MurNAc-pentapeptide onto the lipid carrier undecaprenyl phosphate, yielding undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide, known as lipid I.|||Cell inner membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS01430 ^@ http://purl.uniprot.org/uniprot/I3Y5U9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS10085 ^@ http://purl.uniprot.org/uniprot/I3YAM6 ^@ Subcellular Location Annotation ^@ Cell inner membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS13570 ^@ http://purl.uniprot.org/uniprot/I3YCJ1 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.|||Cytoplasm|||Homodimer.|||Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide. http://togogenome.org/gene/765911:THIVI_RS08495 ^@ http://purl.uniprot.org/uniprot/I3Y9R2 ^@ Similarity ^@ Belongs to the small heat shock protein (HSP20) family. http://togogenome.org/gene/765911:THIVI_RS11585 ^@ http://purl.uniprot.org/uniprot/I3YBH1 ^@ Function|||Similarity ^@ Belongs to the phenylacetyl-CoA ligase family.|||Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). http://togogenome.org/gene/765911:THIVI_RS13515 ^@ http://purl.uniprot.org/uniprot/I3YCI0 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the MraZ family.|||Forms oligomers.|||nucleoid http://togogenome.org/gene/765911:THIVI_RS05695 ^@ http://purl.uniprot.org/uniprot/I3Y880 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the CbiQ family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS09005 ^@ http://purl.uniprot.org/uniprot/I3YA12 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS17230 ^@ http://purl.uniprot.org/uniprot/I3YEK1 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TRAP transporter small permease family.|||Cell inner membrane|||Membrane|||Part of the tripartite ATP-independent periplasmic (TRAP) transport system.|||The complex comprises the extracytoplasmic solute receptor protein and the two transmembrane proteins. http://togogenome.org/gene/765911:THIVI_RS09545 ^@ http://purl.uniprot.org/uniprot/I3YAB3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS02565 ^@ http://purl.uniprot.org/uniprot/I3Y6H0 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PhoU family.|||Cytoplasm|||Homodimer.|||Plays a role in the regulation of phosphate uptake. http://togogenome.org/gene/765911:THIVI_RS19505 ^@ http://purl.uniprot.org/uniprot/I3YFU1 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS15540 ^@ http://purl.uniprot.org/uniprot/I3YDL3 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the SUA5 family. TsaC subfamily.|||Cytoplasm|||Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-)/CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate. http://togogenome.org/gene/765911:THIVI_RS11250 ^@ http://purl.uniprot.org/uniprot/I3YBA5 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the methyltransferase superfamily. RsmH family.|||Cytoplasm|||Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. http://togogenome.org/gene/765911:THIVI_RS01565 ^@ http://purl.uniprot.org/uniprot/I3Y5X6 ^@ Function ^@ Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. http://togogenome.org/gene/765911:THIVI_RS10230 ^@ http://purl.uniprot.org/uniprot/I3YAQ3 ^@ Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation|||Subunit ^@ A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.|||Belongs to the topoisomerase GyrA/ParC subunit family.|||Belongs to the type II topoisomerase GyrA/ParC subunit family.|||Cytoplasm|||Few gyrases are as efficient as E.coli at forming negative supercoils. Not all organisms have 2 type II topoisomerases; in organisms with a single type II topoisomerase this enzyme also has to decatenate newly replicated chromosomes.|||Heterotetramer, composed of two GyrA and two GyrB chains. In the heterotetramer, GyrA contains the active site tyrosine that forms a transient covalent intermediate with DNA, while GyrB binds cofactors and catalyzes ATP hydrolysis. http://togogenome.org/gene/765911:THIVI_RS16330 ^@ http://purl.uniprot.org/uniprot/I3YE20 ^@ Similarity ^@ Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily. http://togogenome.org/gene/765911:THIVI_RS06355 ^@ http://purl.uniprot.org/uniprot/I3Y8K8 ^@ Cofactor|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-II aminoacyl-tRNA synthetase family.|||Binds 3 Mg(2+) ions per subunit.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS05130 ^@ http://purl.uniprot.org/uniprot/I3Y7W4 ^@ Subcellular Location Annotation ^@ Cell membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS16480 ^@ http://purl.uniprot.org/uniprot/I3YE51 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the NqrDE/RnfAE family.|||Cell inner membrane|||Membrane|||Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.|||The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG. http://togogenome.org/gene/765911:THIVI_RS08135 ^@ http://purl.uniprot.org/uniprot/I3Y9I9 ^@ Similarity ^@ Belongs to the CobH/CbiC family. http://togogenome.org/gene/765911:THIVI_RS12180 ^@ http://purl.uniprot.org/uniprot/I3YBT2 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the RdgC family.|||May be involved in recombination.|||nucleoid http://togogenome.org/gene/765911:THIVI_RS08965 ^@ http://purl.uniprot.org/uniprot/I3YA05 ^@ Similarity ^@ Belongs to the PhoH family. http://togogenome.org/gene/765911:THIVI_RS12570 ^@ http://purl.uniprot.org/uniprot/I3YC10 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ATPase alpha/beta chains family. T3SS ATPase subfamily.|||Cell inner membrane|||F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has four main subunits: a(1), b(1), b'(1) and c(9-12).|||F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has four main subunits: a, b, b' and c.|||F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a(1), b(2) and c(9-12). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. CF(1) is attached to CF(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.|||Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. http://togogenome.org/gene/765911:THIVI_RS14040 ^@ http://purl.uniprot.org/uniprot/I3YCS9 ^@ Function|||Induction|||Similarity|||Subcellular Location Annotation|||Subunit ^@ ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.|||Belongs to the peptidase S16 family.|||By heat shock.|||Cytoplasm|||Homohexamer. Organized in a ring with a central cavity. http://togogenome.org/gene/765911:THIVI_RS04690 ^@ http://purl.uniprot.org/uniprot/I3Y7M9 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the Iojap/RsfS family.|||Cytoplasm|||Functions as a ribosomal silencing factor. Interacts with ribosomal protein uL14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.|||Interacts with ribosomal protein uL14 (rplN). http://togogenome.org/gene/765911:THIVI_RS17250 ^@ http://purl.uniprot.org/uniprot/I3YEK5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the prokaryotic sulfate-binding protein family.|||Periplasm http://togogenome.org/gene/765911:THIVI_RS16395 ^@ http://purl.uniprot.org/uniprot/I3YE33 ^@ Activity Regulation|||Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Clade 'B2' sub-subfamily.|||Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.|||Cytoplasm|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Non-allosteric. http://togogenome.org/gene/765911:THIVI_RS10565 ^@ http://purl.uniprot.org/uniprot/I3YAW8 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.|||Cytoplasm|||Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. http://togogenome.org/gene/765911:THIVI_RS02000 ^@ http://purl.uniprot.org/uniprot/I3Y663 ^@ Function|||Similarity ^@ Belongs to the band 7/mec-2 family. HflC subfamily.|||HflC and HflK could regulate a protease. http://togogenome.org/gene/765911:THIVI_RS13305 ^@ http://purl.uniprot.org/uniprot/I3YCD8 ^@ Similarity ^@ Belongs to the NifX/NifY family. http://togogenome.org/gene/765911:THIVI_RS09225 ^@ http://purl.uniprot.org/uniprot/I3YA55 ^@ Caution|||Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the IlvD/Edd family.|||Binds 1 [2Fe-2S] cluster per subunit. This cluster acts as a Lewis acid cofactor.|||Functions in the biosynthesis of branched-chain amino acids. Catalyzes the dehydration of (2R,3R)-2,3-dihydroxy-3-methylpentanoate (2,3-dihydroxy-3-methylvalerate) into 2-oxo-3-methylpentanoate (2-oxo-3-methylvalerate) and of (2R)-2,3-dihydroxy-3-methylbutanoate (2,3-dihydroxyisovalerate) into 2-oxo-3-methylbutanoate (2-oxoisovalerate), the penultimate precursor to L-isoleucine and L-valine, respectively.|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS12325 ^@ http://purl.uniprot.org/uniprot/I3YBW2 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the glutamate 5-kinase family.|||Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS16030 ^@ http://purl.uniprot.org/uniprot/I3YDW3 ^@ Similarity ^@ Belongs to the prokaryotic GSH synthase family. http://togogenome.org/gene/765911:THIVI_RS17815 ^@ http://purl.uniprot.org/uniprot/I3YEV8 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the FPG family.|||Binds 1 zinc ion per subunit.|||Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.|||Monomer. http://togogenome.org/gene/765911:THIVI_RS13355 ^@ http://purl.uniprot.org/uniprot/I3YCE8 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the RRF family.|||Cytoplasm|||Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another. http://togogenome.org/gene/765911:THIVI_RS20260 ^@ http://purl.uniprot.org/uniprot/I3YG88 ^@ Function|||Similarity|||Subunit ^@ Belongs to the bacterial ribosomal protein bL12 family.|||Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation.|||Homodimer. Part of the ribosomal stalk of the 50S ribosomal subunit. Forms a multimeric L10(L12)X complex, where L10 forms an elongated spine to which 2 to 4 L12 dimers bind in a sequential fashion. Binds GTP-bound translation factors. http://togogenome.org/gene/765911:THIVI_RS01400 ^@ http://purl.uniprot.org/uniprot/I3Y5U3 ^@ Function|||Similarity|||Subunit ^@ Belongs to the SNF2/RAD54 helicase family. RapA subfamily.|||Interacts with the RNAP. Has a higher affinity for the core RNAP than for the holoenzyme. Its ATPase activity is stimulated by binding to RNAP.|||Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair. http://togogenome.org/gene/765911:THIVI_RS01490 ^@ http://purl.uniprot.org/uniprot/I3Y5W1 ^@ Function ^@ Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheA is autophosphorylated; it can transfer its phosphate group to either CheB or CheY. http://togogenome.org/gene/765911:THIVI_RS17035 ^@ http://purl.uniprot.org/uniprot/I3YEG4 ^@ Similarity ^@ Belongs to the glycosyl hydrolase 24 family. http://togogenome.org/gene/765911:THIVI_RS18840 ^@ http://purl.uniprot.org/uniprot/I3YFG9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the CitM (TC 2.A.11) transporter family.|||Cell membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS13285 ^@ http://purl.uniprot.org/uniprot/I3YCD4 ^@ Function ^@ Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. http://togogenome.org/gene/765911:THIVI_RS10025 ^@ http://purl.uniprot.org/uniprot/I3YAL4 ^@ Cofactor|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-I aminoacyl-tRNA synthetase family.|||Binds 1 zinc ion per subunit.|||Cytoplasm|||Monomer. http://togogenome.org/gene/765911:THIVI_RS12145 ^@ http://purl.uniprot.org/uniprot/I3YBS5 ^@ Similarity ^@ Belongs to the thioredoxin family. http://togogenome.org/gene/765911:THIVI_RS00035 ^@ http://purl.uniprot.org/uniprot/I3Y527 ^@ Similarity ^@ Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. http://togogenome.org/gene/765911:THIVI_RS04620 ^@ http://purl.uniprot.org/uniprot/I3Y7L3 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the R-transferase family. Bpt subfamily.|||Cytoplasm|||Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. http://togogenome.org/gene/765911:THIVI_RS03975 ^@ http://purl.uniprot.org/uniprot/I3Y787 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ABC-4 integral membrane protein family. LolC/E subfamily.|||Membrane http://togogenome.org/gene/765911:THIVI_RS10245 ^@ http://purl.uniprot.org/uniprot/I3YAQ6 ^@ Function|||Subcellular Location Annotation ^@ Catalyzes the Claisen rearrangement of chorismate to prephenate and the decarboxylation/dehydration of prephenate to phenylpyruvate.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS21020 ^@ http://purl.uniprot.org/uniprot/I3YGP0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.|||Cell inner membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS18535 ^@ http://purl.uniprot.org/uniprot/I3YFA3 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the transpeptidase family. MrdA subfamily.|||Catalyzes cross-linking of the peptidoglycan cell wall.|||Cell inner membrane http://togogenome.org/gene/765911:THIVI_RS13620 ^@ http://purl.uniprot.org/uniprot/I3YCK1 ^@ Caution|||Similarity|||Subcellular Location Annotation ^@ Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.|||Cell inner membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane http://togogenome.org/gene/765911:THIVI_RS15155 ^@ http://purl.uniprot.org/uniprot/I3YDD7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the SecD/SecF family. SecF subfamily.|||Cell inner membrane|||Forms a complex with SecD. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF-YajC and YidC.|||Membrane|||Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. http://togogenome.org/gene/765911:THIVI_RS16300 ^@ http://purl.uniprot.org/uniprot/I3YE14 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the BamD family.|||Cell outer membrane|||Part of the Bam complex.|||Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. http://togogenome.org/gene/765911:THIVI_RS22165 ^@ http://purl.uniprot.org/uniprot/I3YHB0 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS05495 ^@ http://purl.uniprot.org/uniprot/I3Y840 ^@ Similarity ^@ Belongs to the complex I 75 kDa subunit family. http://togogenome.org/gene/765911:THIVI_RS01790 ^@ http://purl.uniprot.org/uniprot/U3GJL3 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the type III secretion exporter family.|||Cell membrane|||Membrane|||Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin. http://togogenome.org/gene/765911:THIVI_RS13750 ^@ http://purl.uniprot.org/uniprot/I3YCN0 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-II aminoacyl-tRNA synthetase family.|||Cytoplasm|||Tetramer of two alpha and two beta subunits. http://togogenome.org/gene/765911:THIVI_RS03240 ^@ http://purl.uniprot.org/uniprot/I3Y6V0 ^@ Similarity ^@ Belongs to the small heat shock protein (HSP20) family. http://togogenome.org/gene/765911:THIVI_RS08905 ^@ http://purl.uniprot.org/uniprot/I3Y9Z3 ^@ Function|||Similarity|||Subunit ^@ Belongs to the GcvP family. N-terminal subunit subfamily.|||The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.|||The glycine cleavage system is composed of four proteins: P, T, L and H. In this organism, the P 'protein' is a heterodimer of two subunits. http://togogenome.org/gene/765911:THIVI_RS05135 ^@ http://purl.uniprot.org/uniprot/I3Y7W5 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS19865 ^@ http://purl.uniprot.org/uniprot/I3YG13 ^@ Subcellular Location Annotation ^@ Cytoplasm http://togogenome.org/gene/765911:THIVI_RS16255 ^@ http://purl.uniprot.org/uniprot/I3YE05 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 1 subfamily.|||Binds 1 zinc ion per subunit.|||Cytoplasm|||Homodimer.|||Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. http://togogenome.org/gene/765911:THIVI_RS10675 ^@ http://purl.uniprot.org/uniprot/I3YAZ0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the MotA family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS09675 ^@ http://purl.uniprot.org/uniprot/I3YAE3 ^@ Function|||Similarity|||Subunit ^@ Belongs to the ChlB/BchB/BchZ family.|||Chlorophyllide reductase is composed of three subunits; BchX, BchY and BchZ. Forms a heterodimer of one BchY and one BchZ subunit.|||Converts chlorophylls (Chl) into bacteriochlorophylls (BChl) by reducing ring B of the tetrapyrrole. http://togogenome.org/gene/765911:THIVI_RS01440 ^@ http://purl.uniprot.org/uniprot/I3Y5V1 ^@ Function|||Similarity|||Subunit ^@ Belongs to the bacterial histone-like protein family.|||Heterodimer of an alpha and a beta chain.|||This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. http://togogenome.org/gene/765911:THIVI_RS03400 ^@ http://purl.uniprot.org/uniprot/I3Y6Y4 ^@ Function|||Similarity ^@ Belongs to the UbiT family.|||Required for O(2)-independent ubiquinone (coenzyme Q) biosynthesis. Likely functions as an accessory factor. http://togogenome.org/gene/765911:THIVI_RS16660 ^@ http://purl.uniprot.org/uniprot/I3YE87 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. http://togogenome.org/gene/765911:THIVI_RS02670 ^@ http://purl.uniprot.org/uniprot/I3Y6J0 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the dsrC/tusE family.|||Cytoplasm|||Part of a sulfur-relay system. http://togogenome.org/gene/765911:THIVI_RS19345 ^@ http://purl.uniprot.org/uniprot/I3YFR9 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily.|||Binds 1 zinc ion per subunit.|||Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon. http://togogenome.org/gene/765911:THIVI_RS08565 ^@ http://purl.uniprot.org/uniprot/I3Y9S6 ^@ Similarity|||Subunit ^@ Belongs to the CarA family.|||Composed of two chains; the small (or glutamine) chain promotes the hydrolysis of glutamine to ammonia, which is used by the large (or ammonia) chain to synthesize carbamoyl phosphate. http://togogenome.org/gene/765911:THIVI_RS13420 ^@ http://purl.uniprot.org/uniprot/I3YCG1 ^@ Similarity ^@ Belongs to the GSP E family. http://togogenome.org/gene/765911:THIVI_RS02350 ^@ http://purl.uniprot.org/uniprot/I3Y6C9 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the NifU family.|||Binds 1 Fe cation per subunit.|||Binds 1 [2Fe-2S] cluster per subunit.|||May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. http://togogenome.org/gene/765911:THIVI_RS03290 ^@ http://purl.uniprot.org/uniprot/I3Y6W1 ^@ Cofactor|||Function ^@ Binds 2 [4Fe-4S] clusters.|||Component of a complex that catalyzes the oxidation of glycolate to glyoxylate. http://togogenome.org/gene/765911:THIVI_RS10450 ^@ http://purl.uniprot.org/uniprot/I3YAU4 ^@ Function|||Similarity ^@ Belongs to the precorrin methyltransferase family.|||In the C-terminal section; belongs to the precorrin methyltransferase family.|||In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family.|||Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. http://togogenome.org/gene/765911:THIVI_RS15235 ^@ http://purl.uniprot.org/uniprot/I3YDF3 ^@ Similarity ^@ Belongs to the N(4)/N(6)-methyltransferase family. http://togogenome.org/gene/765911:THIVI_RS19020 ^@ http://purl.uniprot.org/uniprot/I3YFK4 ^@ Similarity|||Subunit ^@ Belongs to the [NiFe]/[NiFeSe] hydrogenase small subunit family.|||Heterodimer of a large and a small subunit. http://togogenome.org/gene/765911:THIVI_RS02015 ^@ http://purl.uniprot.org/uniprot/I3Y666 ^@ Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-II aminoacyl-tRNA synthetase family. HisZ subfamily.|||Cytoplasm|||Heteromultimer composed of HisG and HisZ subunits.|||Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.|||This function is generally fulfilled by the C-terminal part of HisG, which is missing in some bacteria such as this one. http://togogenome.org/gene/765911:THIVI_RS07595 ^@ http://purl.uniprot.org/uniprot/I3Y992 ^@ Function|||Miscellaneous|||Similarity|||Subunit ^@ Belongs to the RuBisCO small chain family.|||Heterohexadecamer of 8 large and 8 small subunits.|||RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. Although the small subunit is not catalytic it is essential for maximal activity.|||The basic functional RuBisCO is composed of a large chain homodimer in a 'head-to-tail' conformation. In form I RuBisCO this homodimer is arranged in a barrel-like tetramer with the small subunits forming a tetrameric 'cap' on each end of the 'barrel'. http://togogenome.org/gene/765911:THIVI_RS00120 ^@ http://purl.uniprot.org/uniprot/I3Y544 ^@ Function|||Similarity ^@ Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.|||Involved in the type II fatty acid elongation cycle. Catalyzes the elongation of a wide range of acyl-ACP by the addition of two carbons from malonyl-ACP to an acyl acceptor. Can efficiently catalyze the conversion of palmitoleoyl-ACP (cis-hexadec-9-enoyl-ACP) to cis-vaccenoyl-ACP (cis-octadec-11-enoyl-ACP), an essential step in the thermal regulation of fatty acid composition. http://togogenome.org/gene/765911:THIVI_RS22380 ^@ http://purl.uniprot.org/uniprot/I3Y537 ^@ Function|||Similarity ^@ Belongs to the DUF177 domain family.|||Plays a role in synthesis, processing and/or stability of 23S rRNA. http://togogenome.org/gene/765911:THIVI_RS17435 ^@ http://purl.uniprot.org/uniprot/I3YEN9 ^@ Cofactor|||Function ^@ Binds 2 [4Fe-4S] clusters.|||Component of a complex that catalyzes the oxidation of glycolate to glyoxylate. http://togogenome.org/gene/765911:THIVI_RS14705 ^@ http://purl.uniprot.org/uniprot/I3YD44 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. http://togogenome.org/gene/765911:THIVI_RS06270 ^@ http://purl.uniprot.org/uniprot/I3Y8J4 ^@ Similarity ^@ Belongs to the UPF0751 family. http://togogenome.org/gene/765911:THIVI_RS01140 ^@ http://purl.uniprot.org/uniprot/I3Y5N6 ^@ Similarity ^@ Belongs to the YkuD family. http://togogenome.org/gene/765911:THIVI_RS06145 ^@ http://purl.uniprot.org/uniprot/I3Y8H0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the OmpP1/FadL family.|||Cell outer membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS06340 ^@ http://purl.uniprot.org/uniprot/G4DT07 ^@ Similarity ^@ Belongs to the transposase 11 family. http://togogenome.org/gene/765911:THIVI_RS12745 ^@ http://purl.uniprot.org/uniprot/I3YC44 ^@ Similarity ^@ Belongs to the mannose-6-phosphate isomerase type 2 family. http://togogenome.org/gene/765911:THIVI_RS21690 ^@ http://purl.uniprot.org/uniprot/I3YH16 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the SMC family.|||Contains large globular domains required for ATP hydrolysis at each terminus and a third globular domain forming a flexible hinge near the middle of the molecule. These domains are separated by coiled-coil structures.|||Cytoplasm|||Homodimer.|||Required for chromosome condensation and partitioning. http://togogenome.org/gene/765911:THIVI_RS00365 ^@ http://purl.uniprot.org/uniprot/I3Y591 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.|||Binds 2 [4Fe-4S] clusters per subunit.|||Cell inner membrane|||Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.|||The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG. http://togogenome.org/gene/765911:THIVI_RS00390 ^@ http://purl.uniprot.org/uniprot/I3Y596 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS18935 ^@ http://purl.uniprot.org/uniprot/I3YFI6 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the complex I 75 kDa subunit family.|||Binds 1 [2Fe-2S] cluster per subunit.|||Composed of 13 different subunits. Subunits NuoCD, E, F, and G constitute the peripheral sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/765911:THIVI_RS02700 ^@ http://purl.uniprot.org/uniprot/I3Y6J6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the NrfD family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS05765 ^@ http://purl.uniprot.org/uniprot/I3Y892 ^@ Function|||Similarity ^@ Belongs to the bacterial ribosomal protein bL9 family.|||Binds to the 23S rRNA. http://togogenome.org/gene/765911:THIVI_RS14145 ^@ http://purl.uniprot.org/uniprot/I3YCV0 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS18050 ^@ http://purl.uniprot.org/uniprot/I3YF04 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the thioredoxin family. DsbC subfamily.|||Periplasm|||Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process. http://togogenome.org/gene/765911:THIVI_RS11270 ^@ http://purl.uniprot.org/uniprot/I3YBA9 ^@ Similarity ^@ Belongs to the UPF0102 family. http://togogenome.org/gene/765911:THIVI_RS08535 ^@ http://purl.uniprot.org/uniprot/I3Y9S0 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the AB hydrolase superfamily. Carboxylesterase BioH family.|||Cytoplasm|||Monomer.|||The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters. http://togogenome.org/gene/765911:THIVI_RS17930 ^@ http://purl.uniprot.org/uniprot/I3YEY2 ^@ Similarity ^@ Belongs to the HypE family. http://togogenome.org/gene/765911:THIVI_RS17475 ^@ http://purl.uniprot.org/uniprot/I3YEP5 ^@ Similarity ^@ Belongs to the DEAD box helicase family. http://togogenome.org/gene/765911:THIVI_RS02020 ^@ http://purl.uniprot.org/uniprot/I3Y667 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the adenylosuccinate synthetase family.|||Binds 1 Mg(2+) ion per subunit.|||Cytoplasm|||Homodimer.|||Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP. http://togogenome.org/gene/765911:THIVI_RS15625 ^@ http://purl.uniprot.org/uniprot/I3YDN2 ^@ Cofactor|||Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.|||Binds 1 zinc ion per subunit.|||Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile).|||Cytoplasm|||IleRS has two distinct active sites: one for aminoacylation and one for editing. The misactivated valine is translocated from the active site to the editing site, which sterically excludes the correctly activated isoleucine. The single editing site contains two valyl binding pockets, one specific for each substrate (Val-AMP or Val-tRNA(Ile)).|||Monomer. http://togogenome.org/gene/765911:THIVI_RS10360 ^@ http://purl.uniprot.org/uniprot/I3YAS6 ^@ Similarity ^@ Belongs to the hemerythrin family. http://togogenome.org/gene/765911:THIVI_RS07535 ^@ http://purl.uniprot.org/uniprot/I3Y981 ^@ Function|||Similarity|||Subunit ^@ Belongs to the bacterial histone-like protein family.|||Heterodimer of an alpha and a beta chain.|||This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. http://togogenome.org/gene/765911:THIVI_RS20235 ^@ http://purl.uniprot.org/uniprot/I3YG83 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the SecE/SEC61-gamma family.|||Component of the Sec protein translocase complex. Heterotrimer consisting of SecY, SecE and SecG subunits. The heterotrimers can form oligomers, although 1 heterotrimer is thought to be able to translocate proteins. Interacts with the ribosome. Interacts with SecDF, and other proteins may be involved. Interacts with SecA.|||Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS08695 ^@ http://purl.uniprot.org/uniprot/I3Y9U8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ExbD/TolR family.|||Cell inner membrane|||Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.|||The Tol-Pal system is composed of five core proteins: the inner membrane proteins TolA, TolQ and TolR, the periplasmic protein TolB and the outer membrane protein Pal. They form a network linking the inner and outer membranes and the peptidoglycan layer. http://togogenome.org/gene/765911:THIVI_RS05840 ^@ http://purl.uniprot.org/uniprot/I3Y8A4 ^@ Subcellular Location Annotation ^@ Cytoplasm http://togogenome.org/gene/765911:THIVI_RS20425 ^@ http://purl.uniprot.org/uniprot/I3YGC2 ^@ Similarity|||Subunit ^@ Belongs to the bacterial ribosomal protein bL17 family.|||Part of the 50S ribosomal subunit. Contacts protein L32. http://togogenome.org/gene/765911:THIVI_RS22345 ^@ http://purl.uniprot.org/uniprot/I3YHE9 ^@ Similarity ^@ Belongs to the glycosyl hydrolase 13 family. http://togogenome.org/gene/765911:THIVI_RS03515 ^@ http://purl.uniprot.org/uniprot/I3Y706 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS06810 ^@ http://purl.uniprot.org/uniprot/I3Y8U5 ^@ Cofactor|||Function|||Subunit ^@ Alpha(8)-beta(8). The alpha component is a flavoprotein, the beta component is a hemoprotein.|||Binds 1 FAD per subunit.|||Binds 1 FMN per subunit.|||Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component. http://togogenome.org/gene/765911:THIVI_RS20760 ^@ http://purl.uniprot.org/uniprot/I3YGJ0 ^@ Similarity ^@ Belongs to the ClpX chaperone family. http://togogenome.org/gene/765911:THIVI_RS10955 ^@ http://purl.uniprot.org/uniprot/I3YB46 ^@ Activity Regulation|||Caution|||Function|||Similarity|||Subunit ^@ Belongs to the IMPDH/GMPR family.|||Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.|||Homotetramer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Mycophenolic acid (MPA) is a non-competitive inhibitor that prevents formation of the closed enzyme conformation by binding to the same site as the amobile flap. In contrast, mizoribine monophosphate (MZP) is a competitive inhibitor that induces the closed conformation. MPA is a potent inhibitor of mammalian IMPDHs but a poor inhibitor of the bacterial enzymes. MZP is a more potent inhibitor of bacterial IMPDH. http://togogenome.org/gene/765911:THIVI_RS11020 ^@ http://purl.uniprot.org/uniprot/I3YB60 ^@ Function|||Similarity ^@ Belongs to the nucleoside phosphorylase PpnP family.|||Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions. http://togogenome.org/gene/765911:THIVI_RS05180 ^@ http://purl.uniprot.org/uniprot/I3Y7X5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the CPA3 antiporters (TC 2.A.63) subunit E family.|||Cell membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS01870 ^@ http://purl.uniprot.org/uniprot/I3Y637 ^@ Similarity ^@ Belongs to the type III secretion exporter family. http://togogenome.org/gene/765911:THIVI_RS06425 ^@ http://purl.uniprot.org/uniprot/I3Y8M2 ^@ Cofactor|||Similarity ^@ Belongs to the MsrB Met sulfoxide reductase family.|||Binds 1 zinc ion per subunit. The zinc ion is important for the structural integrity of the protein. http://togogenome.org/gene/765911:THIVI_RS04800 ^@ http://purl.uniprot.org/uniprot/I3Y7Q2 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the LptE lipoprotein family.|||Cell outer membrane|||Component of the lipopolysaccharide transport and assembly complex. Interacts with LptD.|||Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane. http://togogenome.org/gene/765911:THIVI_RS07540 ^@ http://purl.uniprot.org/uniprot/I3Y982 ^@ Caution|||Cofactor|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.|||Binds 2 magnesium ions per tetramer.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Tetramer of two alpha and two beta subunits. http://togogenome.org/gene/765911:THIVI_RS12120 ^@ http://purl.uniprot.org/uniprot/I3YBS0 ^@ Similarity ^@ In the C-terminal section; belongs to the transpeptidase family.|||In the N-terminal section; belongs to the glycosyltransferase 51 family. http://togogenome.org/gene/765911:THIVI_RS08065 ^@ http://purl.uniprot.org/uniprot/I3Y9H5 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the MetA family.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine. http://togogenome.org/gene/765911:THIVI_RS13010 ^@ http://purl.uniprot.org/uniprot/I3YC79 ^@ Similarity ^@ Belongs to the ABC transporter superfamily. http://togogenome.org/gene/765911:THIVI_RS01455 ^@ http://purl.uniprot.org/uniprot/I3Y5V4 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the EPSP synthase family.|||Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer. http://togogenome.org/gene/765911:THIVI_RS07590 ^@ http://purl.uniprot.org/uniprot/I3Y991 ^@ Caution|||Cofactor|||Function|||Miscellaneous|||Similarity|||Subunit ^@ Belongs to the RuBisCO large chain family. Type I subfamily.|||Binds 1 Mg(2+) ion per subunit.|||Heterohexadecamer of 8 large chains and 8 small chains.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site.|||The basic functional RuBisCO is composed of a large chain homodimer in a 'head-to-tail' conformation. In form I RuBisCO this homodimer is arranged in a barrel-like tetramer with the small subunits forming a tetrameric 'cap' on each end of the 'barrel'. http://togogenome.org/gene/765911:THIVI_RS21025 ^@ http://purl.uniprot.org/uniprot/I3YGP1 ^@ Function|||Subcellular Location Annotation|||Subunit ^@ Membrane|||Membrane-anchoring subunit of succinate dehydrogenase (SDH).|||Part of an enzyme complex containing four subunits: a flavoprotein, an iron-sulfur protein, plus two membrane-anchoring proteins, SdhC and SdhD. http://togogenome.org/gene/765911:THIVI_RS18415 ^@ http://purl.uniprot.org/uniprot/I3YF79 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the exbB/tolQ family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS06585 ^@ http://purl.uniprot.org/uniprot/I3Y8P7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PNT beta subunit family.|||Cell inner membrane|||Heterodimer of an alpha and a beta chain.|||Membrane|||The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane. http://togogenome.org/gene/765911:THIVI_RS08555 ^@ http://purl.uniprot.org/uniprot/I3Y9S4 ^@ Function|||Similarity ^@ Belongs to the GreA/GreB family.|||Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. http://togogenome.org/gene/765911:THIVI_RS08645 ^@ http://purl.uniprot.org/uniprot/I3Y9U0 ^@ Function|||Similarity ^@ Belongs to the ATPase alpha/beta chains family.|||Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit. http://togogenome.org/gene/765911:THIVI_RS17950 ^@ http://purl.uniprot.org/uniprot/I3YEY6 ^@ Similarity ^@ Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. http://togogenome.org/gene/765911:THIVI_RS19885 ^@ http://purl.uniprot.org/uniprot/I3YG17 ^@ Function ^@ Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheA is autophosphorylated; it can transfer its phosphate group to either CheB or CheY. http://togogenome.org/gene/765911:THIVI_RS08485 ^@ http://purl.uniprot.org/uniprot/I3Y9R0 ^@ Function|||Similarity ^@ Belongs to the alpha-carbonic anhydrase family.|||Reversible hydration of carbon dioxide. http://togogenome.org/gene/765911:THIVI_RS08040 ^@ http://purl.uniprot.org/uniprot/I3Y9H0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the UPF0718 family.|||Cell membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS17430 ^@ http://purl.uniprot.org/uniprot/I3YEN8 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the COQ7 family.|||Binds 2 iron ions per subunit.|||Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol during ubiquinone biosynthesis.|||Cell membrane http://togogenome.org/gene/765911:THIVI_RS05970 ^@ http://purl.uniprot.org/uniprot/I3Y8C9 ^@ Function ^@ Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheA is autophosphorylated; it can transfer its phosphate group to either CheB or CheY. http://togogenome.org/gene/765911:THIVI_RS12695 ^@ http://purl.uniprot.org/uniprot/I3YC35 ^@ Similarity ^@ Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. http://togogenome.org/gene/765911:THIVI_RS02590 ^@ http://purl.uniprot.org/uniprot/I3Y6H5 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. http://togogenome.org/gene/765911:THIVI_RS15420 ^@ http://purl.uniprot.org/uniprot/I3YDI9 ^@ Similarity ^@ Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family. http://togogenome.org/gene/765911:THIVI_RS06435 ^@ http://purl.uniprot.org/uniprot/I3Y8M4 ^@ Cofactor|||Function|||PTM|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Prokaryotic type I sub-subfamily.|||Binds 1 pyruvoyl group covalently per subunit.|||Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).|||Cell membrane|||Heterodimer of a large membrane-associated beta subunit and a small pyruvoyl-containing alpha subunit.|||Is synthesized initially as an inactive proenzyme. Formation of the active enzyme involves a self-maturation process in which the active site pyruvoyl group is generated from an internal serine residue via an autocatalytic post-translational modification. Two non-identical subunits are generated from the proenzyme in this reaction, and the pyruvate is formed at the N-terminus of the alpha chain, which is derived from the carboxyl end of the proenzyme. The autoendoproteolytic cleavage occurs by a canonical serine protease mechanism, in which the side chain hydroxyl group of the serine supplies its oxygen atom to form the C-terminus of the beta chain, while the remainder of the serine residue undergoes an oxidative deamination to produce ammonia and the pyruvoyl prosthetic group on the alpha chain. During this reaction, the Ser that is part of the protease active site of the proenzyme becomes the pyruvoyl prosthetic group, which constitutes an essential element of the active site of the mature decarboxylase. http://togogenome.org/gene/765911:THIVI_RS00755 ^@ http://purl.uniprot.org/uniprot/I3Y5G4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the oxidase-dependent Fe transporter (OFeT) (TC 9.A.10.1) family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS00110 ^@ http://purl.uniprot.org/uniprot/I3Y542 ^@ Function|||Similarity|||Subunit ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family.|||Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.|||Homotetramer. http://togogenome.org/gene/765911:THIVI_RS02990 ^@ http://purl.uniprot.org/uniprot/I3Y6Q2 ^@ Similarity ^@ Belongs to the peptidase S8 family. http://togogenome.org/gene/765911:THIVI_RS12535 ^@ http://purl.uniprot.org/uniprot/I3YC03 ^@ Function|||Similarity ^@ Belongs to the MoeA family.|||Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. http://togogenome.org/gene/765911:THIVI_RS06745 ^@ http://purl.uniprot.org/uniprot/I3Y8T2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the arginine deiminase family.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS06665 ^@ http://purl.uniprot.org/uniprot/I3Y8R3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the CPA3 antiporters (TC 2.A.63) subunit E family.|||Cell membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS08240 ^@ http://purl.uniprot.org/uniprot/I3Y9L0 ^@ Domain|||Function|||Similarity ^@ Belongs to the vitamin-B12 dependent methionine synthase family.|||Catalyzes the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.|||Modular enzyme with four functionally distinct domains. The isolated Hcy-binding domain catalyzes methyl transfer from free methylcobalamin to homocysteine. The Hcy-binding domain in association with the pterin-binding domain catalyzes the methylation of cob(I)alamin by methyltetrahydrofolate and the methylation of homocysteine. The B12-binding domain binds the cofactor. The AdoMet activation domain binds S-adenosyl-L-methionine. Under aerobic conditions cob(I)alamin can be converted to inactive cob(II)alamin. Reductive methylation by S-adenosyl-L-methionine and flavodoxin regenerates methylcobalamin. http://togogenome.org/gene/765911:THIVI_RS22205 ^@ http://purl.uniprot.org/uniprot/I3YHB8 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the NAD kinase family.|||Cytoplasm|||Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS20225 ^@ http://purl.uniprot.org/uniprot/I3YG82 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.|||Cytoplasm|||Monomer.|||This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis. http://togogenome.org/gene/765911:THIVI_RS15795 ^@ http://purl.uniprot.org/uniprot/I3YDR5 ^@ Similarity ^@ Belongs to the hemerythrin family. http://togogenome.org/gene/765911:THIVI_RS01965 ^@ http://purl.uniprot.org/uniprot/I3Y656 ^@ Similarity|||Subcellular Location Annotation ^@ Bacterial flagellum|||Belongs to the bacterial flagellin family.|||Secreted http://togogenome.org/gene/765911:THIVI_RS06670 ^@ http://purl.uniprot.org/uniprot/I3Y8R4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the CPA3 antiporters (TC 2.A.63) subunit F family.|||Cell membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS19275 ^@ http://purl.uniprot.org/uniprot/I3YFQ5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the V-ATPase 116 kDa subunit family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS13310 ^@ http://purl.uniprot.org/uniprot/I3YCD9 ^@ Function|||Similarity ^@ Belongs to the NifD/NifK/NifE/NifN family.|||This protein may play a role in the biosynthesis of the prosthetic group of nitrogenase (FeMo cofactor). http://togogenome.org/gene/765911:THIVI_RS03025 ^@ http://purl.uniprot.org/uniprot/I3Y6Q9 ^@ Similarity ^@ Belongs to the thioredoxin family. http://togogenome.org/gene/765911:THIVI_RS01105 ^@ http://purl.uniprot.org/uniprot/I3Y5N0 ^@ Similarity ^@ Belongs to the disproportionating enzyme family. http://togogenome.org/gene/765911:THIVI_RS16090 ^@ http://purl.uniprot.org/uniprot/I3YDX5 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the PurK/PurT family.|||Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).|||Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)- to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS03320 ^@ http://purl.uniprot.org/uniprot/I3Y6W7 ^@ Similarity ^@ Belongs to the DEAD box helicase family. http://togogenome.org/gene/765911:THIVI_RS04515 ^@ http://purl.uniprot.org/uniprot/I3Y7J2 ^@ Caution|||Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-II aminoacyl-tRNA synthetase family. Type-1 seryl-tRNA synthetase subfamily.|||Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec).|||Consists of two distinct domains, a catalytic core and a N-terminal extension that is involved in tRNA binding.|||Cytoplasm|||Homodimer. The tRNA molecule binds across the dimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS06660 ^@ http://purl.uniprot.org/uniprot/I3Y8R2 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the phospholipase A1 family.|||Binds 1 Ca(2+) ion per monomer. In the dimeric form the Ca(2+) is bound by different amino acids with binding of each Ca(2+) shared with ligands coming from each monomer. The Ca(2+) ion may have a role in catalysis.|||Cell outer membrane|||Homodimer; dimerization is reversible, and the dimeric form is the active one.|||Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities.|||Membrane http://togogenome.org/gene/765911:THIVI_RS10060 ^@ http://purl.uniprot.org/uniprot/I3YAM1 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the UreD family.|||Cytoplasm|||Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.|||UreD, UreF and UreG form a complex that acts as a GTP-hydrolysis-dependent molecular chaperone, activating the urease apoprotein by helping to assemble the nickel containing metallocenter of UreC. The UreE protein probably delivers the nickel. http://togogenome.org/gene/765911:THIVI_RS19320 ^@ http://purl.uniprot.org/uniprot/I3YFR4 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the AceK family.|||Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS09340 ^@ http://purl.uniprot.org/uniprot/I3YA70 ^@ Function|||Subcellular Location Annotation|||Subunit ^@ Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS07215 ^@ http://purl.uniprot.org/uniprot/I3Y923 ^@ Caution|||Subunit ^@ Homotetramer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS05910 ^@ http://purl.uniprot.org/uniprot/I3Y8B7 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the FliL family.|||Cell inner membrane|||Controls the rotational direction of flagella during chemotaxis.|||Membrane http://togogenome.org/gene/765911:THIVI_RS16140 ^@ http://purl.uniprot.org/uniprot/I3YDY5 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the pyrroline-5-carboxylate reductase family.|||Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS02935 ^@ http://purl.uniprot.org/uniprot/I3Y6P1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the RseB family.|||Periplasm http://togogenome.org/gene/765911:THIVI_RS15510 ^@ http://purl.uniprot.org/uniprot/I3YDK7 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the polypeptide deformylase family.|||Binds 1 Fe(2+) ion.|||Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. http://togogenome.org/gene/765911:THIVI_RS03495 ^@ http://purl.uniprot.org/uniprot/I3Y702 ^@ Function|||Similarity ^@ Belongs to the CobT family.|||Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). http://togogenome.org/gene/765911:THIVI_RS01150 ^@ http://purl.uniprot.org/uniprot/I3Y5N8 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the phosphoenolpyruvate carboxykinase [GTP] family.|||Binds 1 Mn(2+) ion per subunit.|||Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle.|||Cytoplasm|||Monomer. http://togogenome.org/gene/765911:THIVI_RS09195 ^@ http://purl.uniprot.org/uniprot/I3YA49 ^@ Similarity ^@ Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. http://togogenome.org/gene/765911:THIVI_RS00105 ^@ http://purl.uniprot.org/uniprot/I3Y541 ^@ Similarity ^@ Belongs to the fabD family. http://togogenome.org/gene/765911:THIVI_RS15100 ^@ http://purl.uniprot.org/uniprot/I3YDC6 ^@ Function|||Similarity ^@ Belongs to the ribonucleoside diphosphate reductase large chain family.|||Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. http://togogenome.org/gene/765911:THIVI_RS18300 ^@ http://purl.uniprot.org/uniprot/I3YF57 ^@ Similarity ^@ Belongs to the small heat shock protein (HSP20) family. http://togogenome.org/gene/765911:THIVI_RS12955 ^@ http://purl.uniprot.org/uniprot/I3YC69 ^@ Domain|||Function|||Similarity ^@ Belongs to the RecA family. RadA subfamily.|||DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.|||Plays a role in repairing double-strand DNA breaks, probably involving stabilizing or processing branched DNA or blocked replication forks.|||The middle region has homology to RecA with ATPase motifs including the RadA KNRFG motif, while the C-terminus is homologous to Lon protease. http://togogenome.org/gene/765911:THIVI_RS22185 ^@ http://purl.uniprot.org/uniprot/I3YHB4 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.|||Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.|||Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-ketoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate).|||Cytoplasm|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS15790 ^@ http://purl.uniprot.org/uniprot/I3YDR4 ^@ Similarity ^@ Belongs to the alpha-acetolactate decarboxylase family. http://togogenome.org/gene/765911:THIVI_RS01335 ^@ http://purl.uniprot.org/uniprot/I3Y5S6 ^@ Function ^@ Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. http://togogenome.org/gene/765911:THIVI_RS19210 ^@ http://purl.uniprot.org/uniprot/I3YFP2 ^@ Activity Regulation|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the enolase family.|||Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.|||Cell surface|||Component of the RNA degradosome, which is a multiprotein complex involved in RNA processing and mRNA degradation.|||Cytoplasm|||Secreted|||The covalent binding to the substrate causes inactivation of the enzyme, and possibly serves as a signal for the export of the protein. http://togogenome.org/gene/765911:THIVI_RS07545 ^@ http://purl.uniprot.org/uniprot/I3Y983 ^@ Cofactor|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.|||Binds 2 magnesium ions per tetramer.|||Cytoplasm|||Tetramer of two alpha and two beta subunits. http://togogenome.org/gene/765911:THIVI_RS16325 ^@ http://purl.uniprot.org/uniprot/I3YE19 ^@ Similarity ^@ Belongs to the peptidase S41A family. http://togogenome.org/gene/765911:THIVI_RS04985 ^@ http://purl.uniprot.org/uniprot/I3Y7T5 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response.|||Belongs to the SrkA/RdoA protein kinase family.|||Cytoplasm|||Monomer. http://togogenome.org/gene/765911:THIVI_RS20320 ^@ http://purl.uniprot.org/uniprot/I3YGA0 ^@ Function|||Similarity ^@ Belongs to the universal ribosomal protein uS19 family.|||Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. http://togogenome.org/gene/765911:THIVI_RS09525 ^@ http://purl.uniprot.org/uniprot/I3YAA9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the acetate uptake transporter (AceTr) (TC 2.A.96) family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS12575 ^@ http://purl.uniprot.org/uniprot/I3YC11 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ATPase delta chain family.|||Cell inner membrane|||F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.|||F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has four main subunits: a(1), b(1), b'(1) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta, b and b' chains.|||F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has three main subunits: a(1), b(2) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.|||This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction. http://togogenome.org/gene/765911:THIVI_RS04330 ^@ http://purl.uniprot.org/uniprot/I3Y7F5 ^@ Function ^@ Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. http://togogenome.org/gene/765911:THIVI_RS22260 ^@ http://purl.uniprot.org/uniprot/I3YHC8 ^@ Similarity ^@ Belongs to the short-chain fatty acyl-CoA assimilation regulator (ScfR) family. http://togogenome.org/gene/765911:THIVI_RS09065 ^@ http://purl.uniprot.org/uniprot/I3YA22 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS05010 ^@ http://purl.uniprot.org/uniprot/I3Y7U0 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn).|||Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS01940 ^@ http://purl.uniprot.org/uniprot/I3Y651 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Bacterial flagellum basal body|||Belongs to the flagella basal body rod proteins family.|||The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod. The rod consists of about 26 subunits of FlgG in the distal portion, and FlgB, FlgC and FlgF are thought to build up the proximal portion of the rod with about 6 subunits each. http://togogenome.org/gene/765911:THIVI_RS18480 ^@ http://purl.uniprot.org/uniprot/I3YF92 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the HCP family.|||Binds 1 [2Fe-2S] cluster.|||Binds 1 hybrid [4Fe-2O-2S] cluster.|||Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS11680 ^@ http://purl.uniprot.org/uniprot/I3YBJ0 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS01540 ^@ http://purl.uniprot.org/uniprot/I3Y5X1 ^@ Domain|||Function|||PTM|||Similarity|||Subcellular Location Annotation ^@ Belongs to the CheB family.|||Contains a C-terminal catalytic domain, and an N-terminal region which modulates catalytic activity.|||Cytoplasm|||Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid.|||Phosphorylated by CheA. Phosphorylation of the N-terminal regulatory domain activates the methylesterase activity. http://togogenome.org/gene/765911:THIVI_RS18045 ^@ http://purl.uniprot.org/uniprot/I3YF03 ^@ Similarity ^@ Belongs to the UPF0234 family. http://togogenome.org/gene/765911:THIVI_RS11195 ^@ http://purl.uniprot.org/uniprot/I3YB94 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the FtsQ/DivIB family. FtsQ subfamily.|||Cell inner membrane|||Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly.|||Part of a complex composed of FtsB, FtsL and FtsQ. http://togogenome.org/gene/765911:THIVI_RS21635 ^@ http://purl.uniprot.org/uniprot/I3YH05 ^@ Function|||Similarity ^@ Belongs to the esterase D family.|||Serine hydrolase involved in the detoxification of formaldehyde. http://togogenome.org/gene/765911:THIVI_RS10845 ^@ http://purl.uniprot.org/uniprot/I3YB24 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Acts as a magnesium transporter.|||Belongs to the SLC41A transporter family.|||Cell membrane|||Homodimer.|||Membrane http://togogenome.org/gene/765911:THIVI_RS01840 ^@ http://purl.uniprot.org/uniprot/I3Y632 ^@ Domain|||Function|||PTM|||Similarity|||Subcellular Location Annotation ^@ Belongs to the CheB family.|||Contains a C-terminal catalytic domain, and an N-terminal region which modulates catalytic activity.|||Cytoplasm|||Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid.|||Phosphorylated by CheA. Phosphorylation of the N-terminal regulatory domain activates the methylesterase activity. http://togogenome.org/gene/765911:THIVI_RS08900 ^@ http://purl.uniprot.org/uniprot/I3Y9Z2 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the GcvH family.|||Binds 1 lipoyl cofactor covalently.|||The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.|||The glycine cleavage system is composed of four proteins: P, T, L and H. http://togogenome.org/gene/765911:THIVI_RS24220 ^@ http://purl.uniprot.org/uniprot/I3Y7K3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS16840 ^@ http://purl.uniprot.org/uniprot/I3YEC3 ^@ Cofactor|||Similarity ^@ Belongs to the peptidase S45 family.|||Binds 1 Ca(2+) ion per dimer. http://togogenome.org/gene/765911:THIVI_RS20925 ^@ http://purl.uniprot.org/uniprot/I3YGM1 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the thymidylate synthase family. Bacterial-type ThyA subfamily.|||Catalyzes the reductive methylation of 2'-deoxyuridine-5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS16700 ^@ http://purl.uniprot.org/uniprot/I3YE97 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the exbB/tolQ family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS16865 ^@ http://purl.uniprot.org/uniprot/I3YEC8 ^@ Function|||Similarity ^@ Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.|||Specifically catalyzes the dephosphorylation of 2-phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. http://togogenome.org/gene/765911:THIVI_RS11545 ^@ http://purl.uniprot.org/uniprot/I3YBG3 ^@ Function|||Similarity|||Subunit ^@ Belongs to the Orn/Lys/Arg decarboxylase class-II family. LysA subfamily.|||Homodimer.|||Specifically catalyzes the decarboxylation of meso-diaminopimelate (meso-DAP) to L-lysine. http://togogenome.org/gene/765911:THIVI_RS14540 ^@ http://purl.uniprot.org/uniprot/I3YD16 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the bacterial CoaD family.|||Cytoplasm|||Homohexamer.|||Reversibly transfers an adenylyl group from ATP to 4'-phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. http://togogenome.org/gene/765911:THIVI_RS13350 ^@ http://purl.uniprot.org/uniprot/I3YCE7 ^@ Activity Regulation|||Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the UMP kinase family.|||Catalyzes the reversible phosphorylation of UMP to UDP.|||Cytoplasm|||Homohexamer.|||Inhibited by UTP.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS05525 ^@ http://purl.uniprot.org/uniprot/I3Y846 ^@ Similarity ^@ Belongs to the acylphosphatase family. http://togogenome.org/gene/765911:THIVI_RS00100 ^@ http://purl.uniprot.org/uniprot/I3Y540 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the thiolase-like superfamily. FabH family.|||Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids.|||Cytoplasm|||Homodimer.|||The last Arg residue of the ACP-binding site is essential for the weak association between ACP/AcpP and FabH. http://togogenome.org/gene/765911:THIVI_RS20400 ^@ http://purl.uniprot.org/uniprot/I3YGB6 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the SecY/SEC61-alpha family.|||Cell inner membrane|||Component of the Sec protein translocase complex. Heterotrimer consisting of SecY, SecE and SecG subunits. The heterotrimers can form oligomers, although 1 heterotrimer is thought to be able to translocate proteins. Interacts with the ribosome. Interacts with SecDF, and other proteins may be involved. Interacts with SecA.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane|||The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. http://togogenome.org/gene/765911:THIVI_RS15295 ^@ http://purl.uniprot.org/uniprot/I3YDG4 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the TPP enzyme family. MenD subfamily.|||Binds 1 thiamine pyrophosphate per subunit.|||Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC).|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS07220 ^@ http://purl.uniprot.org/uniprot/I3Y924 ^@ Similarity ^@ Belongs to the CIA30 family. http://togogenome.org/gene/765911:THIVI_RS03105 ^@ http://purl.uniprot.org/uniprot/I3Y6S3 ^@ Similarity ^@ Belongs to the acyl-CoA dehydrogenase family. http://togogenome.org/gene/765911:THIVI_RS18895 ^@ http://purl.uniprot.org/uniprot/I3YFH9 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the SecG family.|||Cell membrane|||Involved in protein export. Participates in an early event of protein translocation.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane http://togogenome.org/gene/765911:THIVI_RS20300 ^@ http://purl.uniprot.org/uniprot/I3YG96 ^@ Function|||PTM|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL3 family.|||Methylated by PrmB.|||One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.|||Part of the 50S ribosomal subunit. Forms a cluster with proteins L14 and L19. http://togogenome.org/gene/765911:THIVI_RS06160 ^@ http://purl.uniprot.org/uniprot/I3Y8H3 ^@ Activity Regulation|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the ATP phosphoribosyltransferase family. Long subfamily.|||Catalyzes the condensation of ATP and 5-phosphoribose 1-diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity.|||Cytoplasm|||Feedback inhibited by histidine. http://togogenome.org/gene/765911:THIVI_RS01010 ^@ http://purl.uniprot.org/uniprot/I3Y5L0 ^@ Similarity ^@ Belongs to the band 7/mec-2 family. http://togogenome.org/gene/765911:THIVI_RS16860 ^@ http://purl.uniprot.org/uniprot/I3YEC7 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the ribulose-phosphate 3-epimerase family.|||Binds 1 divalent metal cation per subunit.|||Catalyzes the reversible epimerization of D-ribulose 5-phosphate to D-xylulose 5-phosphate. http://togogenome.org/gene/765911:THIVI_RS10195 ^@ http://purl.uniprot.org/uniprot/I3YAP7 ^@ Function|||Similarity ^@ Allosteric enzyme that catalyzes the rate-limiting step in glycogen catabolism, the phosphorolytic cleavage of glycogen to produce glucose-1-phosphate, and plays a central role in maintaining cellular and organismal glucose homeostasis.|||Belongs to the glycogen phosphorylase family.|||Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. http://togogenome.org/gene/765911:THIVI_RS10235 ^@ http://purl.uniprot.org/uniprot/I3YAQ4 ^@ Caution|||Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.|||Binds 1 pyridoxal phosphate per subunit.|||Catalyzes the reversible conversion of 3-phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4-phosphonooxybutanoate to phosphohydroxythreonine.|||Cytoplasm|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS18515 ^@ http://purl.uniprot.org/uniprot/I3YF99 ^@ Function|||Similarity|||Subunit ^@ Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln).|||Belongs to the GatC family.|||Heterotrimer of A, B and C subunits. http://togogenome.org/gene/765911:THIVI_RS14460 ^@ http://purl.uniprot.org/uniprot/I3YD01 ^@ PTM ^@ Binds 2 heme c groups covalently per subunit. http://togogenome.org/gene/765911:THIVI_RS13605 ^@ http://purl.uniprot.org/uniprot/I3YCJ8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS17995 ^@ http://purl.uniprot.org/uniprot/G4DT07 ^@ Similarity ^@ Belongs to the transposase 11 family. http://togogenome.org/gene/765911:THIVI_RS04505 ^@ http://purl.uniprot.org/uniprot/I3Y7J0 ^@ Function|||Similarity|||Subunit ^@ Belongs to the LeuD family. LeuD type 1 subfamily.|||Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate.|||Heterodimer of LeuC and LeuD. http://togogenome.org/gene/765911:THIVI_RS15150 ^@ http://purl.uniprot.org/uniprot/I3YDD6 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the SecD/SecF family. SecD subfamily.|||Cell inner membrane|||Forms a complex with SecF. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF-YajC and YidC.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane|||Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. http://togogenome.org/gene/765911:THIVI_RS20520 ^@ http://purl.uniprot.org/uniprot/I3YGE1 ^@ Subcellular Location Annotation ^@ Cytoplasm http://togogenome.org/gene/765911:THIVI_RS18880 ^@ http://purl.uniprot.org/uniprot/I3YFH6 ^@ Similarity ^@ Belongs to the N(4)/N(6)-methyltransferase family. http://togogenome.org/gene/765911:THIVI_RS06830 ^@ http://purl.uniprot.org/uniprot/I3Y8U9 ^@ Similarity ^@ Belongs to the oxygen-dependent FAD-linked oxidoreductase family. http://togogenome.org/gene/765911:THIVI_RS19155 ^@ http://purl.uniprot.org/uniprot/I3YFN0 ^@ Similarity ^@ Belongs to the YkuD family. http://togogenome.org/gene/765911:THIVI_RS04400 ^@ http://purl.uniprot.org/uniprot/I3Y7G9 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily. http://togogenome.org/gene/765911:THIVI_RS08490 ^@ http://purl.uniprot.org/uniprot/I3Y9R1 ^@ Caution|||Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the MobA family.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer.|||The N-terminal domain determines nucleotide recognition and specific binding, while the C-terminal domain determines the specific binding to the target protein.|||Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor. http://togogenome.org/gene/765911:THIVI_RS18620 ^@ http://purl.uniprot.org/uniprot/I3YFC0 ^@ Similarity ^@ Belongs to the metallophosphoesterase superfamily. YfcE family. http://togogenome.org/gene/765911:THIVI_RS08380 ^@ http://purl.uniprot.org/uniprot/I3Y9N8 ^@ Caution|||Function|||Similarity ^@ Belongs to the class I-like SAM-binding methyltransferase superfamily. MenG/UbiE family.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2). http://togogenome.org/gene/765911:THIVI_RS08910 ^@ http://purl.uniprot.org/uniprot/I3Y9Z4 ^@ Function|||Miscellaneous|||Similarity|||Subunit ^@ Belongs to the peroxiredoxin family. Tpx subfamily.|||Homodimer.|||The active site is a conserved redox-active cysteine residue, the peroxidatic cysteine (C(P)), which makes the nucleophilic attack on the peroxide substrate. The peroxide oxidizes the C(P)-SH to cysteine sulfenic acid (C(P)-SOH), which then reacts with another cysteine residue, the resolving cysteine (C(R)), to form a disulfide bridge. The disulfide is subsequently reduced by an appropriate electron donor to complete the catalytic cycle. In this atypical 2-Cys peroxiredoxin, C(R) is present in the same subunit to form an intramolecular disulfide. The disulfide is subsequently reduced by thioredoxin.|||Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. http://togogenome.org/gene/765911:THIVI_RS16060 ^@ http://purl.uniprot.org/uniprot/I3YDW9 ^@ Similarity ^@ Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. http://togogenome.org/gene/765911:THIVI_RS22220 ^@ http://purl.uniprot.org/uniprot/I3YHC1 ^@ Function|||Induction|||Similarity ^@ Acts as a chaperone.|||Belongs to the heat shock protein 70 family.|||By stress conditions e.g. heat shock. http://togogenome.org/gene/765911:THIVI_RS08410 ^@ http://purl.uniprot.org/uniprot/I3Y9P4 ^@ Function|||Similarity ^@ Belongs to the PINc/VapC protein family.|||Toxic component of a toxin-antitoxin (TA) system. An RNase. http://togogenome.org/gene/765911:THIVI_RS20785 ^@ http://purl.uniprot.org/uniprot/I3YGJ4 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the LolA family.|||Monomer.|||Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).|||Periplasm http://togogenome.org/gene/765911:THIVI_RS13235 ^@ http://purl.uniprot.org/uniprot/I3YCC4 ^@ Function|||Similarity|||Subunit ^@ Associates with the 50S ribosomal subunit.|||Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.|||GTPase that plays an essential role in the late steps of ribosome biogenesis. http://togogenome.org/gene/765911:THIVI_RS00410 ^@ http://purl.uniprot.org/uniprot/I3Y5A0 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the KdpC family.|||Cell inner membrane|||Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex.|||The system is composed of three essential subunits: KdpA, KdpB and KdpC. http://togogenome.org/gene/765911:THIVI_RS01730 ^@ http://purl.uniprot.org/uniprot/I3Y610 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Bacterial flagellum basal body|||Belongs to the FliG family.|||Cell inner membrane|||FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.|||Membrane http://togogenome.org/gene/765911:THIVI_RS02655 ^@ http://purl.uniprot.org/uniprot/I3Y6I7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the DsrE/TusD family.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS08130 ^@ http://purl.uniprot.org/uniprot/I3Y9I8 ^@ Similarity ^@ Belongs to the precorrin methyltransferase family. http://togogenome.org/gene/765911:THIVI_RS10680 ^@ http://purl.uniprot.org/uniprot/I3YAZ1 ^@ Similarity ^@ Belongs to the MotB family. http://togogenome.org/gene/765911:THIVI_RS13085 ^@ http://purl.uniprot.org/uniprot/I3YC94 ^@ Function|||Similarity ^@ Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.|||Catalyzes the biosynthesis of agmatine from arginine. http://togogenome.org/gene/765911:THIVI_RS17225 ^@ http://purl.uniprot.org/uniprot/I3YEK0 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TRAP transporter large permease family.|||Cell inner membrane|||Membrane|||Part of the tripartite ATP-independent periplasmic (TRAP) transport system.|||The complex comprises the extracytoplasmic solute receptor protein and the two transmembrane proteins. http://togogenome.org/gene/765911:THIVI_RS17965 ^@ http://purl.uniprot.org/uniprot/I3YEY9 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the dTDP-4-dehydrorhamnose reductase family.|||Binds 1 Mg(2+) ion per monomer.|||Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. http://togogenome.org/gene/765911:THIVI_RS14370 ^@ http://purl.uniprot.org/uniprot/I3YCY2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the CPA3 antiporters (TC 2.A.63) subunit E family.|||Cell membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS13475 ^@ http://purl.uniprot.org/uniprot/I3YCH2 ^@ Function|||Similarity ^@ Belongs to the class-I DAHP synthase family.|||Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP). http://togogenome.org/gene/765911:THIVI_RS12310 ^@ http://purl.uniprot.org/uniprot/I3YBV9 ^@ Similarity ^@ In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family.|||In the N-terminal section; belongs to the malic enzymes family. http://togogenome.org/gene/765911:THIVI_RS14070 ^@ http://purl.uniprot.org/uniprot/I3YCT6 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ThiG family.|||Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.|||Cytoplasm|||Homotetramer. Forms heterodimers with either ThiH or ThiS. http://togogenome.org/gene/765911:THIVI_RS10900 ^@ http://purl.uniprot.org/uniprot/I3YB35 ^@ Similarity ^@ Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. http://togogenome.org/gene/765911:THIVI_RS22125 ^@ http://purl.uniprot.org/uniprot/I3YHA2 ^@ Cofactor|||Similarity ^@ Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.|||Binds 1 FAD per subunit. http://togogenome.org/gene/765911:THIVI_RS15375 ^@ http://purl.uniprot.org/uniprot/I3YDI0 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS15 family.|||Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.|||One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.|||Part of the 30S ribosomal subunit. Forms a bridge to the 50S subunit in the 70S ribosome, contacting the 23S rRNA. http://togogenome.org/gene/765911:THIVI_RS13785 ^@ http://purl.uniprot.org/uniprot/I3YCN6 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS06780 ^@ http://purl.uniprot.org/uniprot/I3Y8T9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the autoinducer-2 exporter (AI-2E) (TC 2.A.86) family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS01575 ^@ http://purl.uniprot.org/uniprot/I3Y5X8 ^@ Function ^@ Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheA is autophosphorylated; it can transfer its phosphate group to either CheB or CheY. http://togogenome.org/gene/765911:THIVI_RS00130 ^@ http://purl.uniprot.org/uniprot/I3Y546 ^@ Function|||Similarity ^@ Belongs to the transglycosylase MltG family.|||Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. http://togogenome.org/gene/765911:THIVI_RS05145 ^@ http://purl.uniprot.org/uniprot/I3Y7W7 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS12260 ^@ http://purl.uniprot.org/uniprot/I3YBU8 ^@ Similarity ^@ Belongs to the UPF0166 family. http://togogenome.org/gene/765911:THIVI_RS17955 ^@ http://purl.uniprot.org/uniprot/I3YEY7 ^@ Function|||Similarity ^@ Belongs to the glucose-1-phosphate thymidylyltransferase family.|||Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. http://togogenome.org/gene/765911:THIVI_RS09325 ^@ http://purl.uniprot.org/uniprot/I3YA67 ^@ Similarity ^@ Belongs to the phosphoribulokinase family. http://togogenome.org/gene/765911:THIVI_RS17270 ^@ http://purl.uniprot.org/uniprot/I3YEK9 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS19760 ^@ http://purl.uniprot.org/uniprot/I3YFZ2 ^@ Caution ^@ Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS09700 ^@ http://purl.uniprot.org/uniprot/I3YAF0 ^@ Similarity ^@ Belongs to the NifH/BchL/ChlL family. http://togogenome.org/gene/765911:THIVI_RS16130 ^@ http://purl.uniprot.org/uniprot/I3YDY3 ^@ Caution|||Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the HAM1 NTPase family.|||Binds 1 Mg(2+) ion per subunit.|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. http://togogenome.org/gene/765911:THIVI_RS13560 ^@ http://purl.uniprot.org/uniprot/I3YCI9 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the SecB family.|||Cytoplasm|||Homotetramer, a dimer of dimers. One homotetramer interacts with 1 SecA dimer.|||One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA. http://togogenome.org/gene/765911:THIVI_RS11260 ^@ http://purl.uniprot.org/uniprot/I3YBA7 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the methyltransferase superfamily. RsmI family.|||Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS04730 ^@ http://purl.uniprot.org/uniprot/I3Y7N8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the PstS family.|||Part of the ABC transporter complex PstSACB involved in phosphate import.|||The complex is composed of two ATP-binding proteins (PstB), two transmembrane proteins (PstC and PstA) and a solute-binding protein (PstS). http://togogenome.org/gene/765911:THIVI_RS16710 ^@ http://purl.uniprot.org/uniprot/I3YE99 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the TonB family.|||Cell inner membrane|||Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. http://togogenome.org/gene/765911:THIVI_RS16870 ^@ http://purl.uniprot.org/uniprot/I3YEC9 ^@ Function|||Similarity|||Subunit ^@ Belongs to the anthranilate synthase component I family.|||Heterotetramer consisting of two non-identical subunits: a beta subunit (TrpG) and a large alpha subunit (TrpE).|||Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia. http://togogenome.org/gene/765911:THIVI_RS18590 ^@ http://purl.uniprot.org/uniprot/I3YFB4 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.|||Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer. http://togogenome.org/gene/765911:THIVI_RS18425 ^@ http://purl.uniprot.org/uniprot/I3YF81 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS09215 ^@ http://purl.uniprot.org/uniprot/I3YA53 ^@ Function|||Similarity ^@ Belongs to the PEP-utilizing enzyme family.|||Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate. http://togogenome.org/gene/765911:THIVI_RS07780 ^@ http://purl.uniprot.org/uniprot/I3Y9C8 ^@ Similarity ^@ Belongs to the CbbQ/NirQ/NorQ/GpvN family. http://togogenome.org/gene/765911:THIVI_RS00490 ^@ http://purl.uniprot.org/uniprot/I3Y5B5 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PanB family.|||Binds 1 Mg(2+) ion per subunit.|||Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate.|||Cytoplasm|||Homodecamer; pentamer of dimers. http://togogenome.org/gene/765911:THIVI_RS04455 ^@ http://purl.uniprot.org/uniprot/I3Y7I0 ^@ Similarity ^@ Belongs to the N(4)/N(6)-methyltransferase family. http://togogenome.org/gene/765911:THIVI_RS11945 ^@ http://purl.uniprot.org/uniprot/I3YBN8 ^@ Subcellular Location Annotation ^@ Cell inner membrane http://togogenome.org/gene/765911:THIVI_RS20490 ^@ http://purl.uniprot.org/uniprot/I3YGD5 ^@ Function|||Similarity|||Subunit ^@ Belongs to the ribose 5-phosphate isomerase family.|||Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS09040 ^@ http://purl.uniprot.org/uniprot/I3YA17 ^@ Similarity ^@ Belongs to the glutaredoxin family. Monothiol subfamily. http://togogenome.org/gene/765911:THIVI_RS12735 ^@ http://purl.uniprot.org/uniprot/I3YC42 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the GDT1 family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS18075 ^@ http://purl.uniprot.org/uniprot/G4DT07 ^@ Similarity ^@ Belongs to the transposase 11 family. http://togogenome.org/gene/765911:THIVI_RS17320 ^@ http://purl.uniprot.org/uniprot/I3YEL8 ^@ Similarity ^@ Belongs to the GppA/Ppx family. http://togogenome.org/gene/765911:THIVI_RS04615 ^@ http://purl.uniprot.org/uniprot/I3Y7L2 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the L/F-transferase family.|||Cytoplasm|||Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. http://togogenome.org/gene/765911:THIVI_RS05470 ^@ http://purl.uniprot.org/uniprot/I3Y835 ^@ Cofactor|||Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PdxA family.|||Binds 1 divalent metal cation per subunit. Can use ions such as Zn(2+), Mg(2+) or Co(2+).|||Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L-threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).|||Cytoplasm|||Homodimer.|||The active site is located at the dimer interface. http://togogenome.org/gene/765911:THIVI_RS15145 ^@ http://purl.uniprot.org/uniprot/I3YDD5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the YajC family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS15675 ^@ http://purl.uniprot.org/uniprot/I3YDP2 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the MlaE permease family.|||Cell inner membrane|||Membrane|||Part of the ABC transporter complex MlaFEDB, which is involved in a phospholipid transport pathway that maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner membrane. Probably responsible for the translocation of the substrate across the membrane.|||The complex is composed of two ATP-binding proteins (MlaF), two transmembrane proteins (MlaE), two cytoplasmic solute-binding proteins (MlaB) and six periplasmic solute-binding proteins (MlaD). http://togogenome.org/gene/765911:THIVI_RS10695 ^@ http://purl.uniprot.org/uniprot/I3YAZ4 ^@ Function|||Similarity|||Subunit ^@ Belongs to the transferase hexapeptide repeat family. LpxD subfamily.|||Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.|||Homotrimer. http://togogenome.org/gene/765911:THIVI_RS01850 ^@ http://purl.uniprot.org/uniprot/I3Y634 ^@ Similarity ^@ Belongs to the MotB family. http://togogenome.org/gene/765911:THIVI_RS12140 ^@ http://purl.uniprot.org/uniprot/I3YBS4 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the Rho family.|||Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template.|||Homohexamer. The homohexamer assembles into an open ring structure.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS13940 ^@ http://purl.uniprot.org/uniprot/I3YCR5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the GSP H family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS13790 ^@ http://purl.uniprot.org/uniprot/I3YCN7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the beta sliding clamp family.|||Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication as well as for processivity of DNA replication.|||Cytoplasm|||Forms a ring-shaped head-to-tail homodimer around DNA. http://togogenome.org/gene/765911:THIVI_RS20750 ^@ http://purl.uniprot.org/uniprot/I3YGI8 ^@ Similarity ^@ Belongs to the NifZ family. http://togogenome.org/gene/765911:THIVI_RS18950 ^@ http://purl.uniprot.org/uniprot/I3YFI9 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I subunit 6 family.|||Cell membrane|||Composed of 13 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/765911:THIVI_RS05485 ^@ http://purl.uniprot.org/uniprot/I3Y838 ^@ Similarity ^@ Belongs to the complex I 51 kDa subunit family. http://togogenome.org/gene/765911:THIVI_RS06190 ^@ http://purl.uniprot.org/uniprot/I3Y8H9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the OpgD/OpgG family.|||Periplasm http://togogenome.org/gene/765911:THIVI_RS04420 ^@ http://purl.uniprot.org/uniprot/I3Y7H3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/765911:THIVI_RS18750 ^@ http://purl.uniprot.org/uniprot/I3YFE9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the exbB/tolQ family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS18375 ^@ http://purl.uniprot.org/uniprot/I3YF72 ^@ Similarity ^@ Belongs to the fructosamine kinase family. http://togogenome.org/gene/765911:THIVI_RS01050 ^@ http://purl.uniprot.org/uniprot/I3Y5L8 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the sigma-70 factor family. RpoH subfamily.|||Cytoplasm|||Interacts with the RNA polymerase core enzyme.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. http://togogenome.org/gene/765911:THIVI_RS05675 ^@ http://purl.uniprot.org/uniprot/I3Y876 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ammonia transporter channel (TC 1.A.11.2) family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS18115 ^@ http://purl.uniprot.org/uniprot/I3YF22 ^@ Cofactor|||Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the Rieske iron-sulfur protein family.|||Binds 1 [2Fe-2S] cluster per subunit.|||Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.|||Membrane|||The Rieske protein is a high potential 2Fe-2S protein.|||The main subunits of complex b-c1 are: cytochrome b, cytochrome c1 and the Rieske protein. http://togogenome.org/gene/765911:THIVI_RS12585 ^@ http://purl.uniprot.org/uniprot/I3YC13 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ATPase C chain family.|||Cell inner membrane|||F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.|||F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has four main subunits: a(1), b(1), b'(1) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta, b and b' chains.|||F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has three main subunits: a(1), b(2) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.|||Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits.|||Membrane http://togogenome.org/gene/765911:THIVI_RS08285 ^@ http://purl.uniprot.org/uniprot/I3Y9L9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ABC-4 integral membrane protein family. LolC/E subfamily.|||Membrane http://togogenome.org/gene/765911:THIVI_RS18550 ^@ http://purl.uniprot.org/uniprot/I3YFA6 ^@ Function|||Similarity ^@ Belongs to the RlpA family.|||Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. http://togogenome.org/gene/765911:THIVI_RS20880 ^@ http://purl.uniprot.org/uniprot/I3YGL3 ^@ Function|||Similarity ^@ Belongs to the bacterial ribosomal protein bL19 family.|||This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. http://togogenome.org/gene/765911:THIVI_RS12610 ^@ http://purl.uniprot.org/uniprot/I3YC18 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Specifically methylates the N7 position of guanine in position 527 of 16S rRNA. http://togogenome.org/gene/765911:THIVI_RS05295 ^@ http://purl.uniprot.org/uniprot/I3Y800 ^@ Similarity ^@ Belongs to the UPF0051 (ycf24) family. http://togogenome.org/gene/765911:THIVI_RS01215 ^@ http://purl.uniprot.org/uniprot/I3Y5Q1 ^@ Similarity ^@ Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. http://togogenome.org/gene/765911:THIVI_RS09780 ^@ http://purl.uniprot.org/uniprot/I3YAG6 ^@ Function|||Similarity|||Subunit ^@ A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD.|||Belongs to the RecD family.|||Heterotrimer of RecB, RecC and RecD. All subunits contribute to DNA-binding. http://togogenome.org/gene/765911:THIVI_RS15820 ^@ http://purl.uniprot.org/uniprot/I3YDR9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ABC-3 integral membrane protein family.|||Cell membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS08220 ^@ http://purl.uniprot.org/uniprot/I3Y9K7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.|||Membrane http://togogenome.org/gene/765911:THIVI_RS21820 ^@ http://purl.uniprot.org/uniprot/I3YH42 ^@ Function|||Similarity|||Subunit ^@ Belongs to the CRISPR-associated endonuclease Cas1 family.|||CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.|||Homodimer, forms a heterotetramer with a Cas2 homodimer. http://togogenome.org/gene/765911:THIVI_RS09540 ^@ http://purl.uniprot.org/uniprot/I3YAB2 ^@ Cofactor|||Similarity ^@ Belongs to the DNA repair enzymes AP/ExoA family.|||Probably binds two magnesium or manganese ions per subunit. http://togogenome.org/gene/765911:THIVI_RS12655 ^@ http://purl.uniprot.org/uniprot/I3YC27 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the peptidase M20A family. DapE subfamily.|||Binds 2 Zn(2+) or Co(2+) ions per subunit.|||Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls.|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS02755 ^@ http://purl.uniprot.org/uniprot/I3Y6K7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ThrE exporter (TC 2.A.79) family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS08145 ^@ http://purl.uniprot.org/uniprot/I3Y9J1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the LysR transcriptional regulatory family.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS14450 ^@ http://purl.uniprot.org/uniprot/U3GJL6 ^@ Similarity ^@ Belongs to the SCO1/2 family. http://togogenome.org/gene/765911:THIVI_RS00900 ^@ http://purl.uniprot.org/uniprot/I3Y5I9 ^@ Similarity ^@ Belongs to the GSP E family. http://togogenome.org/gene/765911:THIVI_RS17870 ^@ http://purl.uniprot.org/uniprot/I3YEW9 ^@ Function|||Similarity ^@ Belongs to the relA/spoT family.|||In eubacteria ppGpp (guanosine 3'-diphosphate 5'-diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. http://togogenome.org/gene/765911:THIVI_RS12175 ^@ http://purl.uniprot.org/uniprot/I3YBT1 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS03365 ^@ http://purl.uniprot.org/uniprot/U3GKG2 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the glycosyltransferase 51 family.|||Cell inner membrane|||Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. http://togogenome.org/gene/765911:THIVI_RS14050 ^@ http://purl.uniprot.org/uniprot/I3YCT2 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the uroporphyrinogen decarboxylase family.|||Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.|||Cytoplasm|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS02880 ^@ http://purl.uniprot.org/uniprot/I3Y6N1 ^@ Function|||Similarity|||Subunit ^@ Belongs to the HsdR family.|||Subunit R is required for both nuclease and ATPase activities, but not for modification.|||The type I restriction/modification system is composed of three polypeptides R, M and S. http://togogenome.org/gene/765911:THIVI_RS18510 ^@ http://purl.uniprot.org/uniprot/I3YF98 ^@ Function|||Similarity|||Subunit ^@ Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln).|||Belongs to the amidase family. GatA subfamily.|||Heterotrimer of A, B and C subunits. http://togogenome.org/gene/765911:THIVI_RS20355 ^@ http://purl.uniprot.org/uniprot/I3YGA7 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL24 family.|||One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.|||One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.|||Part of the 50S ribosomal subunit. http://togogenome.org/gene/765911:THIVI_RS09650 ^@ http://purl.uniprot.org/uniprot/U3GJZ3 ^@ Function|||PTM ^@ Binds 4 heme groups per subunit.|||The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. http://togogenome.org/gene/765911:THIVI_RS18960 ^@ http://purl.uniprot.org/uniprot/I3YFJ1 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS13900 ^@ http://purl.uniprot.org/uniprot/I3YCQ7 ^@ Similarity ^@ Belongs to the GSP E family. http://togogenome.org/gene/765911:THIVI_RS08365 ^@ http://purl.uniprot.org/uniprot/I3Y9N5 ^@ Caution|||Cofactor|||Function|||PTM|||Similarity|||Subunit ^@ Belongs to the peroxidase family. Peroxidase/catalase subfamily.|||Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity.|||Binds 1 heme b (iron(II)-protoporphyrin IX) group per dimer.|||Formation of the three residue Trp-Tyr-Met cross-link is important for the catalase, but not the peroxidase activity of the enzyme.|||Homodimer or homotetramer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS04595 ^@ http://purl.uniprot.org/uniprot/I3Y7K8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the high-potential iron-sulfur protein (HiPIP) family.|||Homodimer.|||Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria. http://togogenome.org/gene/765911:THIVI_RS12950 ^@ http://purl.uniprot.org/uniprot/I3YC68 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the argininosuccinate synthase family. Type 1 subfamily.|||Cytoplasm|||Homotetramer. http://togogenome.org/gene/765911:THIVI_RS13565 ^@ http://purl.uniprot.org/uniprot/I3YCJ0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS02325 ^@ http://purl.uniprot.org/uniprot/I3Y6C4 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the SurE nucleotidase family.|||Binds 1 divalent metal cation per subunit.|||Cytoplasm|||Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates. http://togogenome.org/gene/765911:THIVI_RS19215 ^@ http://purl.uniprot.org/uniprot/I3YFP3 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the FtsB family.|||Cell inner membrane|||Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.|||Part of a complex composed of FtsB, FtsL and FtsQ. http://togogenome.org/gene/765911:THIVI_RS12550 ^@ http://purl.uniprot.org/uniprot/I3YC06 ^@ Similarity ^@ Belongs to the FKBP-type PPIase family. http://togogenome.org/gene/765911:THIVI_RS13190 ^@ http://purl.uniprot.org/uniprot/I3YCB5 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the acetylglutamate kinase family. ArgB subfamily.|||Catalyzes the ATP-dependent phosphorylation of N-acetyl-L-glutamate.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS18285 ^@ http://purl.uniprot.org/uniprot/I3YF54 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS18010 ^@ http://purl.uniprot.org/uniprot/G4DT07 ^@ Similarity ^@ Belongs to the transposase 11 family. http://togogenome.org/gene/765911:THIVI_RS15380 ^@ http://purl.uniprot.org/uniprot/I3YDI1 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the polyribonucleotide nucleotidyltransferase family.|||Component of the RNA degradosome, which is a multiprotein complex involved in RNA processing and mRNA degradation.|||Cytoplasm|||Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction. http://togogenome.org/gene/765911:THIVI_RS15370 ^@ http://purl.uniprot.org/uniprot/I3YDH9 ^@ Function|||Similarity ^@ Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.|||Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs. http://togogenome.org/gene/765911:THIVI_RS02905 ^@ http://purl.uniprot.org/uniprot/I3Y6N6 ^@ Similarity ^@ Belongs to the histone deacetylase family. http://togogenome.org/gene/765911:THIVI_RS07995 ^@ http://purl.uniprot.org/uniprot/I3Y9G4 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.|||Binds 1 zinc ion per subunit.|||Cytoplasm|||Monomer. Associates with 30S ribosomal subunit, binds 16S rRNA.|||One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit. http://togogenome.org/gene/765911:THIVI_RS08655 ^@ http://purl.uniprot.org/uniprot/I3Y9U2 ^@ Function|||Similarity ^@ Belongs to the V-ATPase D subunit family.|||Produces ATP from ADP in the presence of a proton gradient across the membrane. http://togogenome.org/gene/765911:THIVI_RS03710 ^@ http://purl.uniprot.org/uniprot/I3Y744 ^@ Similarity ^@ Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. http://togogenome.org/gene/765911:THIVI_RS19015 ^@ http://purl.uniprot.org/uniprot/I3YFK3 ^@ Similarity ^@ Belongs to the cytochrome c-552 family. http://togogenome.org/gene/765911:THIVI_RS13180 ^@ http://purl.uniprot.org/uniprot/I3YCB3 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the YbaB/EbfC family.|||Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.|||Homodimer.|||nucleoid http://togogenome.org/gene/765911:THIVI_RS16655 ^@ http://purl.uniprot.org/uniprot/I3YE86 ^@ Function|||Similarity|||Subunit ^@ Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln).|||Belongs to the GatB/GatE family. GatB subfamily.|||Heterotrimer of A, B and C subunits. http://togogenome.org/gene/765911:THIVI_RS10055 ^@ http://purl.uniprot.org/uniprot/I3YAM0 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the urease gamma subunit family.|||Cytoplasm|||Heterotrimer of UreA (gamma), UreB (beta) and UreC (alpha) subunits. Three heterotrimers associate to form the active enzyme. http://togogenome.org/gene/765911:THIVI_RS14105 ^@ http://purl.uniprot.org/uniprot/I3YCU2 ^@ Similarity|||Subunit ^@ Belongs to the MoaE family.|||Heterotetramer of 2 MoaD subunits and 2 MoaE subunits. Also stable as homodimer. The enzyme changes between these two forms during catalysis. http://togogenome.org/gene/765911:THIVI_RS14230 ^@ http://purl.uniprot.org/uniprot/I3YCW3 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. RsmA subfamily.|||Cytoplasm|||Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. http://togogenome.org/gene/765911:THIVI_RS11905 ^@ http://purl.uniprot.org/uniprot/I3YBN0 ^@ Similarity ^@ Belongs to the PspA/IM30 family. http://togogenome.org/gene/765911:THIVI_RS20680 ^@ http://purl.uniprot.org/uniprot/I3YGH4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the bacterial sugar transferase family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS02675 ^@ http://purl.uniprot.org/uniprot/I3Y6J1 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS04740 ^@ http://purl.uniprot.org/uniprot/I3Y7P0 ^@ Function|||Similarity|||Subunit ^@ Belongs to the PstS family.|||Part of the ABC transporter complex PstSACB involved in phosphate import.|||The complex is composed of two ATP-binding proteins (PstB), two transmembrane proteins (PstC and PstA) and a solute-binding protein (PstS). http://togogenome.org/gene/765911:THIVI_RS19770 ^@ http://purl.uniprot.org/uniprot/I3YFZ4 ^@ Similarity ^@ Belongs to the anti-sigma-factor antagonist family. http://togogenome.org/gene/765911:THIVI_RS09270 ^@ http://purl.uniprot.org/uniprot/I3YA58 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TatC family.|||Cell inner membrane|||Membrane|||Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.|||The Tat system comprises two distinct complexes: a TatABC complex, containing multiple copies of TatA, TatB and TatC subunits, and a separate TatA complex, containing only TatA subunits. Substrates initially bind to the TatABC complex, which probably triggers association of the separate TatA complex to form the active translocon. http://togogenome.org/gene/765911:THIVI_RS21695 ^@ http://purl.uniprot.org/uniprot/I3YH17 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ZipA family.|||Cell inner membrane|||Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.|||Interacts with FtsZ via their C-terminal domains. http://togogenome.org/gene/765911:THIVI_RS14775 ^@ http://purl.uniprot.org/uniprot/I3YD58 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.|||Cell inner membrane|||Cell membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane|||Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane. http://togogenome.org/gene/765911:THIVI_RS02715 ^@ http://purl.uniprot.org/uniprot/I3Y6J9 ^@ Function|||Similarity|||Subunit ^@ Belongs to the TrpB family.|||Tetramer of two alpha and two beta chains.|||The beta subunit is responsible for the synthesis of L-tryptophan from indole and L-serine. http://togogenome.org/gene/765911:THIVI_RS08790 ^@ http://purl.uniprot.org/uniprot/I3Y9X0 ^@ PTM ^@ Binds 2 heme c groups covalently per subunit. http://togogenome.org/gene/765911:THIVI_RS18120 ^@ http://purl.uniprot.org/uniprot/I3YF23 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the cytochrome b family.|||Binds 2 heme groups non-covalently.|||Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.|||Membrane|||The main subunits of complex b-c1 are: cytochrome b, cytochrome c1 and the Rieske protein. http://togogenome.org/gene/765911:THIVI_RS19105 ^@ http://purl.uniprot.org/uniprot/I3YFM0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the GtrA family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS11710 ^@ http://purl.uniprot.org/uniprot/I3YBJ6 ^@ Similarity ^@ Belongs to the pyruvate kinase family. http://togogenome.org/gene/765911:THIVI_RS11105 ^@ http://purl.uniprot.org/uniprot/I3YB76 ^@ Similarity ^@ Belongs to the VgrG protein family. http://togogenome.org/gene/765911:THIVI_RS18175 ^@ http://purl.uniprot.org/uniprot/I3YF33 ^@ Similarity ^@ Belongs to the HupH/HyaF family. http://togogenome.org/gene/765911:THIVI_RS03120 ^@ http://purl.uniprot.org/uniprot/I3Y6S6 ^@ Caution|||Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.|||Binds 1 pyridoxal phosphate per subunit.|||Catalyzes the reversible conversion of 3-phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4-phosphonooxybutanoate to phosphohydroxythreonine.|||Cytoplasm|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS04835 ^@ http://purl.uniprot.org/uniprot/I3Y7Q7 ^@ Cofactor|||Similarity|||Subcellular Location Annotation ^@ Belongs to the peptidase M48B family.|||Binds 1 zinc ion per subunit.|||Cell inner membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS20160 ^@ http://purl.uniprot.org/uniprot/I3YG73 ^@ Function|||PTM|||Similarity|||Subcellular Location Annotation ^@ Belongs to the prokaryotic/mitochondrial release factor family.|||Cytoplasm|||Methylated by PrmC. Methylation increases the termination efficiency of RF1.|||Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. http://togogenome.org/gene/765911:THIVI_RS20295 ^@ http://purl.uniprot.org/uniprot/I3YG95 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS10 family.|||Involved in the binding of tRNA to the ribosomes.|||Part of the 30S ribosomal subunit. http://togogenome.org/gene/765911:THIVI_RS06640 ^@ http://purl.uniprot.org/uniprot/I3Y8Q8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the PstS family.|||Part of the ABC transporter complex PstSACB involved in phosphate import.|||The complex is composed of two ATP-binding proteins (PstB), two transmembrane proteins (PstC and PstA) and a solute-binding protein (PstS). http://togogenome.org/gene/765911:THIVI_RS19805 ^@ http://purl.uniprot.org/uniprot/I3YG01 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the RNA methyltransferase RlmH family.|||Cytoplasm|||Homodimer.|||Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA. http://togogenome.org/gene/765911:THIVI_RS04710 ^@ http://purl.uniprot.org/uniprot/I3Y7N4 ^@ Function|||Similarity|||Subunit ^@ Belongs to the PstS family.|||Part of the ABC transporter complex PstSACB involved in phosphate import.|||The complex is composed of two ATP-binding proteins (PstB), two transmembrane proteins (PstC and PstA) and a solute-binding protein (PstS). http://togogenome.org/gene/765911:THIVI_RS10570 ^@ http://purl.uniprot.org/uniprot/I3YAW9 ^@ Similarity ^@ Belongs to the group II decarboxylase family. http://togogenome.org/gene/765911:THIVI_RS04155 ^@ http://purl.uniprot.org/uniprot/I3Y7B8 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS09645 ^@ http://purl.uniprot.org/uniprot/I3YAD7 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.|||Belongs to the antenna complex beta subunit family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS10135 ^@ http://purl.uniprot.org/uniprot/I3YAN5 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS10895 ^@ http://purl.uniprot.org/uniprot/I3YB34 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS01900 ^@ http://purl.uniprot.org/uniprot/I3Y642 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the FlgA family.|||Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly.|||Periplasm http://togogenome.org/gene/765911:THIVI_RS04790 ^@ http://purl.uniprot.org/uniprot/I3Y7Q0 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the gamma-glutamyl phosphate reductase family.|||Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS07915 ^@ http://purl.uniprot.org/uniprot/I3Y9E9 ^@ Similarity ^@ Belongs to the transferase hexapeptide repeat family. http://togogenome.org/gene/765911:THIVI_RS15360 ^@ http://purl.uniprot.org/uniprot/I3YDH7 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.|||Cytoplasm|||One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex. http://togogenome.org/gene/765911:THIVI_RS08840 ^@ http://purl.uniprot.org/uniprot/I3Y9X9 ^@ Cofactor|||Similarity ^@ Belongs to the ApbE family.|||Magnesium. Can also use manganese. http://togogenome.org/gene/765911:THIVI_RS02605 ^@ http://purl.uniprot.org/uniprot/I3Y6H8 ^@ Similarity ^@ Belongs to the UDPGP type 2 family. http://togogenome.org/gene/765911:THIVI_RS15525 ^@ http://purl.uniprot.org/uniprot/I3YDL0 ^@ Similarity ^@ Belongs to the Smg family. http://togogenome.org/gene/765911:THIVI_RS16100 ^@ http://purl.uniprot.org/uniprot/I3YDX7 ^@ Function|||Similarity ^@ Belongs to the relA/spoT family.|||In eubacteria ppGpp (guanosine 3'-diphosphate 5'-diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. http://togogenome.org/gene/765911:THIVI_RS19665 ^@ http://purl.uniprot.org/uniprot/I3YFX6 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ 3'-to-5' exoribonuclease specific for small oligoribonucleotides.|||Belongs to the oligoribonuclease family.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS02130 ^@ http://purl.uniprot.org/uniprot/I3Y691 ^@ Similarity ^@ Belongs to the peptidase S11 family. http://togogenome.org/gene/765911:THIVI_RS19330 ^@ http://purl.uniprot.org/uniprot/I3YFR6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the TsaE family.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS04510 ^@ http://purl.uniprot.org/uniprot/I3Y7J1 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the aconitase/IPM isomerase family. LeuC type 1 subfamily.|||Binds 1 [4Fe-4S] cluster per subunit.|||Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate.|||Heterodimer of LeuC and LeuD. http://togogenome.org/gene/765911:THIVI_RS03220 ^@ http://purl.uniprot.org/uniprot/I3Y6U6 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the GroES chaperonin family.|||Cytoplasm|||Heptamer of 7 subunits arranged in a ring. Interacts with the chaperonin GroEL.|||Together with the chaperonin GroEL, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding. GroES binds to the apical surface of the GroEL ring, thereby capping the opening of the GroEL channel. http://togogenome.org/gene/765911:THIVI_RS01995 ^@ http://purl.uniprot.org/uniprot/I3Y662 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the band 7/mec-2 family. HflK subfamily.|||HflC and HflK could encode or regulate a protease.|||HflC and HflK may interact to form a multimeric complex.|||Membrane http://togogenome.org/gene/765911:THIVI_RS14130 ^@ http://purl.uniprot.org/uniprot/I3YCU7 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS21035 ^@ http://purl.uniprot.org/uniprot/I3YGP3 ^@ Subcellular Location Annotation ^@ Cell membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS12335 ^@ http://purl.uniprot.org/uniprot/I3YBW4 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bL27 family. http://togogenome.org/gene/765911:THIVI_RS18975 ^@ http://purl.uniprot.org/uniprot/I3YFJ4 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the DapA family.|||Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).|||Cytoplasm|||Homotetramer; dimer of dimers.|||Was originally thought to be a dihydrodipicolinate synthase (DHDPS), catalyzing the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to dihydrodipicolinate (DHDP). However, it was shown in E.coli that the product of the enzymatic reaction is not dihydrodipicolinate but in fact (4S)-4-hydroxy-2,3,4,5-tetrahydro-(2S)-dipicolinic acid (HTPA), and that the consecutive dehydration reaction leading to DHDP is not spontaneous but catalyzed by DapB. http://togogenome.org/gene/765911:THIVI_RS20575 ^@ http://purl.uniprot.org/uniprot/I3YGF2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS10260 ^@ http://purl.uniprot.org/uniprot/I3YAQ9 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PhoU family.|||Cytoplasm|||Homodimer.|||Plays a role in the regulation of phosphate uptake. http://togogenome.org/gene/765911:THIVI_RS18555 ^@ http://purl.uniprot.org/uniprot/I3YFA7 ^@ Function|||Similarity ^@ Belongs to the peptidase S11 family.|||Removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors. http://togogenome.org/gene/765911:THIVI_RS11330 ^@ http://purl.uniprot.org/uniprot/I3YBC1 ^@ Similarity ^@ Belongs to the pyruvate kinase family. http://togogenome.org/gene/765911:THIVI_RS16380 ^@ http://purl.uniprot.org/uniprot/I3YE30 ^@ Function|||Similarity|||Subunit ^@ Belongs to the MoaC family.|||Catalyzes the conversion of (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP).|||Homohexamer; trimer of dimers. http://togogenome.org/gene/765911:THIVI_RS08915 ^@ http://purl.uniprot.org/uniprot/I3Y9Z5 ^@ Function|||Similarity|||Subunit ^@ Belongs to the GcvP family. C-terminal subunit subfamily.|||The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.|||The glycine cleavage system is composed of four proteins: P, T, L and H. In this organism, the P 'protein' is a heterodimer of two subunits. http://togogenome.org/gene/765911:THIVI_RS03020 ^@ http://purl.uniprot.org/uniprot/I3Y6Q8 ^@ Caution|||Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the adenylate kinase family.|||Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism.|||Consists of three domains, a large central CORE domain and two small peripheral domains, NMPbind and LID, which undergo movements during catalysis. The LID domain closes over the site of phosphoryl transfer upon ATP binding. Assembling and dissambling the active center during each catalytic cycle provides an effective means to prevent ATP hydrolysis.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer. http://togogenome.org/gene/765911:THIVI_RS09310 ^@ http://purl.uniprot.org/uniprot/I3YA64 ^@ Similarity ^@ Belongs to the FKBP-type PPIase family. http://togogenome.org/gene/765911:THIVI_RS21815 ^@ http://purl.uniprot.org/uniprot/I3YH41 ^@ Function|||Similarity|||Subunit ^@ Belongs to the CRISPR-associated endoribonuclease Cas2 protein family.|||CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.|||Homodimer, forms a heterotetramer with a Cas1 homodimer. http://togogenome.org/gene/765911:THIVI_RS20280 ^@ http://purl.uniprot.org/uniprot/I3YG92 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS7 family.|||One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA.|||Part of the 30S ribosomal subunit. Contacts proteins S9 and S11. http://togogenome.org/gene/765911:THIVI_RS10725 ^@ http://purl.uniprot.org/uniprot/I3YB00 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS20325 ^@ http://purl.uniprot.org/uniprot/I3YGA1 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL22 family.|||Part of the 50S ribosomal subunit.|||The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.|||This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g., L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. http://togogenome.org/gene/765911:THIVI_RS09465 ^@ http://purl.uniprot.org/uniprot/I3YA98 ^@ Similarity ^@ Belongs to the four-carbon acid sugar kinase family. http://togogenome.org/gene/765911:THIVI_RS03485 ^@ http://purl.uniprot.org/uniprot/I3Y701 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the TonB-dependent receptor family.|||Cell outer membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS08675 ^@ http://purl.uniprot.org/uniprot/I3Y9U5 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the Pal lipoprotein family.|||Cell outer membrane|||Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.|||The Tol-Pal system is composed of five core proteins: the inner membrane proteins TolA, TolQ and TolR, the periplasmic protein TolB and the outer membrane protein Pal. They form a network linking the inner and outer membranes and the peptidoglycan layer. http://togogenome.org/gene/765911:THIVI_RS00150 ^@ http://purl.uniprot.org/uniprot/I3Y550 ^@ Similarity ^@ Belongs to the metallo-dependent hydrolases superfamily. TatD-type hydrolase family. http://togogenome.org/gene/765911:THIVI_RS13625 ^@ http://purl.uniprot.org/uniprot/I3YCK2 ^@ Similarity ^@ Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. http://togogenome.org/gene/765911:THIVI_RS06440 ^@ http://purl.uniprot.org/uniprot/I3Y8M5 ^@ Caution|||Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the radical SAM superfamily. MoaA family.|||Binds 2 [4Fe-4S] clusters. Binds 1 [4Fe-4S] cluster coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine and 1 [4Fe-4S] cluster coordinated with 3 cysteines and the GTP-derived substrate.|||Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer and homodimer. http://togogenome.org/gene/765911:THIVI_RS12510 ^@ http://purl.uniprot.org/uniprot/I3YBZ8 ^@ Function|||Similarity ^@ Belongs to the RlpA family.|||Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. http://togogenome.org/gene/765911:THIVI_RS06330 ^@ http://purl.uniprot.org/uniprot/I3Y8K4 ^@ Similarity|||Subunit ^@ Belongs to the [NiFe]/[NiFeSe] hydrogenase small subunit family.|||Heterodimer of a large and a small subunit. http://togogenome.org/gene/765911:THIVI_RS04750 ^@ http://purl.uniprot.org/uniprot/I3Y7P2 ^@ Function|||Similarity|||Subunit ^@ Belongs to the polyphosphate kinase 2 (PPK2) family. Class I subfamily.|||Homotetramer.|||Uses inorganic polyphosphate (polyP) as a donor to convert GDP to GTP or ADP to ATP. http://togogenome.org/gene/765911:THIVI_RS11980 ^@ http://purl.uniprot.org/uniprot/I3YBP4 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ABC transporter superfamily. UvrA family.|||Cytoplasm|||Forms a heterotetramer with UvrB during the search for lesions.|||The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. http://togogenome.org/gene/765911:THIVI_RS18780 ^@ http://purl.uniprot.org/uniprot/I3YFF5 ^@ Function|||Similarity ^@ Belongs to the uroporphyrinogen-III synthase family.|||Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. http://togogenome.org/gene/765911:THIVI_RS15415 ^@ http://purl.uniprot.org/uniprot/I3YDI8 ^@ Caution|||Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.|||Binds 3 [4Fe-4S] clusters.|||Cell inner membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.|||The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG. http://togogenome.org/gene/765911:THIVI_RS16705 ^@ http://purl.uniprot.org/uniprot/I3YE98 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ExbD/TolR family.|||Cell membrane http://togogenome.org/gene/765911:THIVI_RS17850 ^@ http://purl.uniprot.org/uniprot/I3YEW5 ^@ Similarity ^@ Belongs to the type IA topoisomerase family. http://togogenome.org/gene/765911:THIVI_RS20360 ^@ http://purl.uniprot.org/uniprot/I3YGA8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL5 family.|||Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA and the P site tRNA. Forms a bridge to the 30S subunit in the 70S ribosome.|||This is 1 of the proteins that bind and probably mediate the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. http://togogenome.org/gene/765911:THIVI_RS14790 ^@ http://purl.uniprot.org/uniprot/I3YD61 ^@ Similarity ^@ Belongs to the PhoU family. http://togogenome.org/gene/765911:THIVI_RS01125 ^@ http://purl.uniprot.org/uniprot/I3Y5N3 ^@ Similarity ^@ Belongs to the UPF0229 family. http://togogenome.org/gene/765911:THIVI_RS18525 ^@ http://purl.uniprot.org/uniprot/I3YFA1 ^@ Function|||Similarity ^@ Belongs to the MreC family.|||Involved in formation and maintenance of cell shape. http://togogenome.org/gene/765911:THIVI_RS18110 ^@ http://purl.uniprot.org/uniprot/I3YF21 ^@ Similarity ^@ Belongs to the GTP cyclohydrolase I type 2/NIF3 family. http://togogenome.org/gene/765911:THIVI_RS01935 ^@ http://purl.uniprot.org/uniprot/I3Y650 ^@ Similarity|||Subcellular Location Annotation ^@ Bacterial flagellum basal body|||Belongs to the flagella basal body rod proteins family. http://togogenome.org/gene/765911:THIVI_RS18695 ^@ http://purl.uniprot.org/uniprot/I3YFD8 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the UbiD family.|||Binds 1 prenylated FMN (prenyl-FMN) per subunit.|||Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis.|||Cell membrane|||Homohexamer. http://togogenome.org/gene/765911:THIVI_RS13110 ^@ http://purl.uniprot.org/uniprot/I3YC99 ^@ Similarity|||Subunit ^@ Belongs to the [NiFe]/[NiFeSe] hydrogenase small subunit family.|||Heterodimer of a large and a small subunit. http://togogenome.org/gene/765911:THIVI_RS17810 ^@ http://purl.uniprot.org/uniprot/U3GKG9 ^@ Function|||Similarity|||Subunit ^@ Belongs to the serine/threonine dehydratase family.|||Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.|||Homotetramer. http://togogenome.org/gene/765911:THIVI_RS22075 ^@ http://purl.uniprot.org/uniprot/I3YH92 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS03765 ^@ http://purl.uniprot.org/uniprot/I3Y754 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the alanine or glycine:cation symporter (AGCS) (TC 2.A.25) family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS01505 ^@ http://purl.uniprot.org/uniprot/I3Y5W4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the drug/metabolite transporter (DMT) superfamily. Small multidrug resistance (SMR) (TC 2.A.7.1) family.|||Cell membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS03010 ^@ http://purl.uniprot.org/uniprot/I3Y6Q6 ^@ Similarity ^@ Belongs to the phosphohexose mutase family. http://togogenome.org/gene/765911:THIVI_RS06845 ^@ http://purl.uniprot.org/uniprot/I3Y8V2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS05940 ^@ http://purl.uniprot.org/uniprot/I3Y8C3 ^@ Domain|||Function|||PTM|||Similarity|||Subcellular Location Annotation ^@ Belongs to the CheB family.|||Contains a C-terminal catalytic domain, and an N-terminal region which modulates catalytic activity.|||Cytoplasm|||Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid.|||Phosphorylated by CheA. Phosphorylation of the N-terminal regulatory domain activates the methylesterase activity. http://togogenome.org/gene/765911:THIVI_RS19220 ^@ http://purl.uniprot.org/uniprot/I3YFP4 ^@ Function|||Similarity ^@ Belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.|||Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). http://togogenome.org/gene/765911:THIVI_RS09630 ^@ http://purl.uniprot.org/uniprot/I3YAD3 ^@ Similarity ^@ Belongs to the UPF0047 family. http://togogenome.org/gene/765911:THIVI_RS02950 ^@ http://purl.uniprot.org/uniprot/I3Y6P4 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. LepA subfamily.|||Cell inner membrane|||Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner. http://togogenome.org/gene/765911:THIVI_RS19730 ^@ http://purl.uniprot.org/uniprot/I3YFY9 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the sigma-70 factor family. RpoD/SigA subfamily.|||Cytoplasm|||Interacts transiently with the RNA polymerase catalytic core.|||Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. http://togogenome.org/gene/765911:THIVI_RS09095 ^@ http://purl.uniprot.org/uniprot/I3YA28 ^@ Similarity ^@ Belongs to the acyl coenzyme A hydrolase family. http://togogenome.org/gene/765911:THIVI_RS08540 ^@ http://purl.uniprot.org/uniprot/I3Y9S1 ^@ Function|||Similarity ^@ Belongs to the methyltransferase superfamily.|||Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway. http://togogenome.org/gene/765911:THIVI_RS12330 ^@ http://purl.uniprot.org/uniprot/I3YBW3 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control.|||Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.|||Cytoplasm|||Monomer. http://togogenome.org/gene/765911:THIVI_RS12255 ^@ http://purl.uniprot.org/uniprot/I3YBU7 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS11205 ^@ http://purl.uniprot.org/uniprot/I3YB96 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the MurB family.|||Cell wall formation.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS14595 ^@ http://purl.uniprot.org/uniprot/I3YD27 ^@ Caution|||Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.|||Binds 1 potassium ion per subunit.|||Cytoplasm|||Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.|||Homodimer. Heterotetramer of two MnmE and two MnmG subunits.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS16275 ^@ http://purl.uniprot.org/uniprot/I3YE09 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the succinate/malate CoA ligase beta subunit family.|||Binds 1 Mg(2+) ion per subunit.|||Heterotetramer of two alpha and two beta subunits.|||Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. http://togogenome.org/gene/765911:THIVI_RS17445 ^@ http://purl.uniprot.org/uniprot/I3YEP1 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL13 family.|||Part of the 50S ribosomal subunit.|||This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. http://togogenome.org/gene/765911:THIVI_RS10240 ^@ http://purl.uniprot.org/uniprot/I3YAQ5 ^@ Similarity ^@ Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. http://togogenome.org/gene/765911:THIVI_RS13155 ^@ http://purl.uniprot.org/uniprot/I3YCA8 ^@ Function|||Similarity ^@ Belongs to the MinE family.|||Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell. http://togogenome.org/gene/765911:THIVI_RS02995 ^@ http://purl.uniprot.org/uniprot/I3Y6Q3 ^@ Similarity ^@ Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. http://togogenome.org/gene/765911:THIVI_RS10200 ^@ http://purl.uniprot.org/uniprot/I3YAP8 ^@ Similarity ^@ Belongs to the XFP family. http://togogenome.org/gene/765911:THIVI_RS10785 ^@ http://purl.uniprot.org/uniprot/I3YB11 ^@ Function|||Similarity|||Subunit ^@ Belongs to the KdsC family.|||Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate.|||Homotetramer. http://togogenome.org/gene/765911:THIVI_RS10370 ^@ http://purl.uniprot.org/uniprot/I3YAS8 ^@ Cofactor|||Similarity ^@ Belongs to the TPP enzyme family.|||Binds 1 Mg(2+) ion per subunit.|||Binds 1 thiamine pyrophosphate per subunit. http://togogenome.org/gene/765911:THIVI_RS02105 ^@ http://purl.uniprot.org/uniprot/I3Y687 ^@ Similarity ^@ Belongs to the prokaryotic/mitochondrial release factor family. http://togogenome.org/gene/765911:THIVI_RS10670 ^@ http://purl.uniprot.org/uniprot/I3YAY9 ^@ Cofactor|||Similarity ^@ Belongs to the UPF0313 family.|||Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. http://togogenome.org/gene/765911:THIVI_RS14515 ^@ http://purl.uniprot.org/uniprot/I3YD11 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS17735 ^@ http://purl.uniprot.org/uniprot/I3YEU3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the CitM (TC 2.A.11) transporter family.|||Cell membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS20990 ^@ http://purl.uniprot.org/uniprot/I3YGN5 ^@ Similarity|||Subunit ^@ Belongs to the NAD(P)-dependent epimerase/dehydratase family.|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS06080 ^@ http://purl.uniprot.org/uniprot/I3Y8F7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ClpA/ClpB family.|||Cytoplasm|||Homohexamer. The oligomerization is ATP-dependent.|||Homohexamer; The oligomerization is ATP-dependent.|||Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE. http://togogenome.org/gene/765911:THIVI_RS10280 ^@ http://purl.uniprot.org/uniprot/I3YAR3 ^@ Similarity ^@ In the N-terminal section; belongs to the zinc metallo-hydrolase group 3 family. http://togogenome.org/gene/765911:THIVI_RS16150 ^@ http://purl.uniprot.org/uniprot/I3YDY7 ^@ Similarity ^@ Belongs to the UPF0235 family. http://togogenome.org/gene/765911:THIVI_RS15320 ^@ http://purl.uniprot.org/uniprot/I3YDG9 ^@ Similarity ^@ Belongs to the methyl-accepting chemotaxis (MCP) protein family. http://togogenome.org/gene/765911:THIVI_RS11795 ^@ http://purl.uniprot.org/uniprot/I3YBK8 ^@ Function|||Similarity ^@ Belongs to the mandelate racemase/muconate lactonizing enzyme family. MenC type 1 subfamily.|||Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) to 2-succinylbenzoate (OSB). http://togogenome.org/gene/765911:THIVI_RS11180 ^@ http://purl.uniprot.org/uniprot/I3YB91 ^@ Function|||Similarity ^@ Belongs to the LpxC family.|||Catalyzes the hydrolysis of UDP-3-O-myristoyl-N-acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis. http://togogenome.org/gene/765911:THIVI_RS18460 ^@ http://purl.uniprot.org/uniprot/I3YF88 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Acetylates the N-terminal alanine of ribosomal protein bS18.|||Belongs to the acetyltransferase family. RimI subfamily.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS13005 ^@ http://purl.uniprot.org/uniprot/I3YC78 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ABC-2 integral membrane protein family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS10595 ^@ http://purl.uniprot.org/uniprot/I3YAX3 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the RNase E/G family. RNase E subfamily.|||Binds 1 Mg(2+) ion per subunit.|||Binds 2 Zn(2+) ions per homotetramer.|||Cell inner membrane|||Component of the RNA degradosome, which is a multiprotein complex involved in RNA processing and mRNA degradation. Within the RNA degradosome, RNase E assembles into a homotetramer formed by a dimer of dimers.|||Cytoplasm|||Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. http://togogenome.org/gene/765911:THIVI_RS05475 ^@ http://purl.uniprot.org/uniprot/I3Y836 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the CDP-alcohol phosphatidyltransferase class-I family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS22240 ^@ http://purl.uniprot.org/uniprot/I3YHC5 ^@ Cofactor|||Similarity ^@ Belongs to the peptidase M48 family.|||Binds 1 zinc ion per subunit. http://togogenome.org/gene/765911:THIVI_RS13395 ^@ http://purl.uniprot.org/uniprot/I3YCF6 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the thioester dehydratase family. FabZ subfamily.|||Cytoplasm|||Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. http://togogenome.org/gene/765911:THIVI_RS14670 ^@ http://purl.uniprot.org/uniprot/I3YD38 ^@ Cofactor ^@ Binds 1 zinc ion per subunit. In the homodimer, two zinc ions are bound between subunits. http://togogenome.org/gene/765911:THIVI_RS20860 ^@ http://purl.uniprot.org/uniprot/I3YGK9 ^@ Similarity ^@ Belongs to the TelA family. http://togogenome.org/gene/765911:THIVI_RS18455 ^@ http://purl.uniprot.org/uniprot/I3YF87 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.|||Binds 3 [4Fe-4S] clusters per subunit.|||Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin. http://togogenome.org/gene/765911:THIVI_RS16075 ^@ http://purl.uniprot.org/uniprot/I3YDX2 ^@ Similarity ^@ Belongs to the GSP E family. http://togogenome.org/gene/765911:THIVI_RS04545 ^@ http://purl.uniprot.org/uniprot/I3Y7J8 ^@ Similarity ^@ Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. http://togogenome.org/gene/765911:THIVI_RS01925 ^@ http://purl.uniprot.org/uniprot/I3Y648 ^@ Function|||Similarity ^@ Belongs to the FlgD family.|||Required for flagellar hook formation. May act as a scaffolding protein. http://togogenome.org/gene/765911:THIVI_RS04500 ^@ http://purl.uniprot.org/uniprot/I3Y7I9 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the isocitrate and isopropylmalate dehydrogenases family. LeuB type 1 subfamily.|||Binds 1 Mg(2+) or Mn(2+) ion per subunit.|||Catalyzes the oxidation of 3-carboxy-2-hydroxy-4-methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2-oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS06605 ^@ http://purl.uniprot.org/uniprot/I3Y8Q1 ^@ Cofactor|||Similarity ^@ Belongs to the DNA photolyase class-1 family.|||Belongs to the DNA photolyase family.|||Binds 1 FAD per subunit. http://togogenome.org/gene/765911:THIVI_RS20385 ^@ http://purl.uniprot.org/uniprot/I3YGB3 ^@ Domain|||Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS5 family.|||Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body.|||Part of the 30S ribosomal subunit. Contacts proteins S4 and S8.|||The N-terminal domain interacts with the head of the 30S subunit; the C-terminal domain interacts with the body and contacts protein S4. The interaction surface between S4 and S5 is involved in control of translational fidelity.|||With S4 and S12 plays an important role in translational accuracy. http://togogenome.org/gene/765911:THIVI_RS08335 ^@ http://purl.uniprot.org/uniprot/I3Y9M9 ^@ Subcellular Location Annotation ^@ Cytoplasm http://togogenome.org/gene/765911:THIVI_RS02575 ^@ http://purl.uniprot.org/uniprot/I3Y6H2 ^@ Similarity ^@ Belongs to the methyl-accepting chemotaxis (MCP) protein family. http://togogenome.org/gene/765911:THIVI_RS08235 ^@ http://purl.uniprot.org/uniprot/I3Y9K9 ^@ Function|||Similarity ^@ Belongs to the CobU/CobP family.|||Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate. http://togogenome.org/gene/765911:THIVI_RS21570 ^@ http://purl.uniprot.org/uniprot/I3YGZ2 ^@ Subcellular Location Annotation ^@ Cell inner membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS14190 ^@ http://purl.uniprot.org/uniprot/I3YCV9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the TerC family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS00370 ^@ http://purl.uniprot.org/uniprot/I3Y592 ^@ Cofactor ^@ Binds 3 [4Fe-4S] clusters. http://togogenome.org/gene/765911:THIVI_RS16610 ^@ http://purl.uniprot.org/uniprot/I3YE77 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS03555 ^@ http://purl.uniprot.org/uniprot/I3Y714 ^@ Function|||Similarity ^@ Belongs to the glutaredoxin family.|||Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins. http://togogenome.org/gene/765911:THIVI_RS13330 ^@ http://purl.uniprot.org/uniprot/I3YCE3 ^@ Activity Regulation|||Caution|||Domain|||Function|||Similarity ^@ Belongs to the GlnD family.|||Has four distinct domains: an N-terminal nucleotidyltransferase (NT) domain responsible for UTase activity, a central HD domain that encodes UR activity, and two C-terminal ACT domains that seem to have a role in glutamine sensing.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism.|||Uridylyltransferase (UTase) activity is inhibited by glutamine, while glutamine activates uridylyl-removing (UR) activity. http://togogenome.org/gene/765911:THIVI_RS14365 ^@ http://purl.uniprot.org/uniprot/I3YCY1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the CPA3 antiporters (TC 2.A.63) subunit F family.|||Cell membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS17515 ^@ http://purl.uniprot.org/uniprot/I3YEQ0 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the CN hydrolase family. Apolipoprotein N-acyltransferase subfamily.|||Catalyzes the phospholipid dependent N-acylation of the N-terminal cysteine of apolipoprotein, the last step in lipoprotein maturation.|||Cell inner membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS16005 ^@ http://purl.uniprot.org/uniprot/I3YDV8 ^@ Function ^@ Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheA is autophosphorylated; it can transfer its phosphate group to either CheB or CheY. http://togogenome.org/gene/765911:THIVI_RS04720 ^@ http://purl.uniprot.org/uniprot/I3Y7N6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.|||Cell inner membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS01835 ^@ http://purl.uniprot.org/uniprot/I3Y631 ^@ Function ^@ Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheA is autophosphorylated; it can transfer its phosphate group to either CheB or CheY. http://togogenome.org/gene/765911:THIVI_RS01805 ^@ http://purl.uniprot.org/uniprot/I3Y625 ^@ Similarity ^@ Belongs to the ParA family. MinD subfamily. http://togogenome.org/gene/765911:THIVI_RS11555 ^@ http://purl.uniprot.org/uniprot/I3YBG5 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the diaminopimelate epimerase family.|||Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS16200 ^@ http://purl.uniprot.org/uniprot/I3YDZ4 ^@ Caution|||Cofactor|||Function|||Similarity ^@ Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family.|||Binds 1 zinc ion per subunit.|||Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L-homocysteine, respectively. Is also able to deaminate adenosine.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS19995 ^@ http://purl.uniprot.org/uniprot/I3YG40 ^@ Similarity ^@ Belongs to the peptidase U62 family. http://togogenome.org/gene/765911:THIVI_RS08705 ^@ http://purl.uniprot.org/uniprot/I3Y9V0 ^@ Similarity ^@ Belongs to the 4-hydroxybenzoyl-CoA thioesterase family. http://togogenome.org/gene/765911:THIVI_RS02720 ^@ http://purl.uniprot.org/uniprot/I3Y6K0 ^@ Similarity ^@ Belongs to the methyl-accepting chemotaxis (MCP) protein family. http://togogenome.org/gene/765911:THIVI_RS20415 ^@ http://purl.uniprot.org/uniprot/I3YGC0 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS4 family.|||One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.|||Part of the 30S ribosomal subunit. Contacts protein S5. The interaction surface between S4 and S5 is involved in control of translational fidelity.|||With S5 and S12 plays an important role in translational accuracy. http://togogenome.org/gene/765911:THIVI_RS16810 ^@ http://purl.uniprot.org/uniprot/I3YEB7 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the UbiK family.|||Cytoplasm|||Required for efficient ubiquinone (coenzyme Q) biosynthesis. UbiK is probably an accessory factor of Ubi enzymes and facilitates ubiquinone biosynthesis by acting as an assembly factor, a targeting factor, or both. http://togogenome.org/gene/765911:THIVI_RS01060 ^@ http://purl.uniprot.org/uniprot/I3Y5M0 ^@ Cofactor|||PTM|||Subcellular Location Annotation ^@ Binds 2 heme groups per subunit.|||Binds 2 heme groups.|||Periplasm http://togogenome.org/gene/765911:THIVI_RS11495 ^@ http://purl.uniprot.org/uniprot/I3YBF2 ^@ Similarity ^@ Belongs to the DegT/DnrJ/EryC1 family. http://togogenome.org/gene/765911:THIVI_RS10045 ^@ http://purl.uniprot.org/uniprot/I3YAL8 ^@ Cofactor|||PTM|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.|||Binds 2 nickel ions per subunit.|||Carbamylation allows a single lysine to coordinate two nickel ions.|||Carboxylation allows a single lysine to coordinate two nickel ions.|||Cytoplasm|||Heterotrimer of UreA (gamma), UreB (beta) and UreC (alpha) subunits. Three heterotrimers associate to form the active enzyme. http://togogenome.org/gene/765911:THIVI_RS15585 ^@ http://purl.uniprot.org/uniprot/I3YDM3 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS02620 ^@ http://purl.uniprot.org/uniprot/I3Y6I1 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the dsrC/tusE family.|||Cytoplasm|||Part of a sulfur-relay system. http://togogenome.org/gene/765911:THIVI_RS02435 ^@ http://purl.uniprot.org/uniprot/I3Y6E6 ^@ Caution|||Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the IspF family.|||Binds 1 divalent metal cation per subunit.|||Homotrimer.|||Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS02890 ^@ http://purl.uniprot.org/uniprot/G4DT07 ^@ Similarity ^@ Belongs to the transposase 11 family. http://togogenome.org/gene/765911:THIVI_RS05375 ^@ http://purl.uniprot.org/uniprot/I3Y817 ^@ Similarity ^@ Belongs to the N(4)/N(6)-methyltransferase family. http://togogenome.org/gene/765911:THIVI_RS15340 ^@ http://purl.uniprot.org/uniprot/I3YDH3 ^@ Caution|||Function|||Miscellaneous|||Similarity|||Subunit ^@ Although this enzyme belongs to the family of MTA phosphorylases based on sequence homology, it has been shown that conserved amino acid substitutions in the substrate binding pocket convert the substrate specificity of this enzyme from 6-aminopurines to 6-oxopurines.|||Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily.|||Catalyzes the reversible phosphorylation of S-methyl-5'-thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1-phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine.|||Homotrimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS00470 ^@ http://purl.uniprot.org/uniprot/I3Y5B2 ^@ Similarity ^@ Belongs to the PTPS family. QueD subfamily. http://togogenome.org/gene/765911:THIVI_RS06685 ^@ http://purl.uniprot.org/uniprot/I3Y8R7 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS21885 ^@ http://purl.uniprot.org/uniprot/I3YH53 ^@ Similarity ^@ Belongs to the UPF0502 family. http://togogenome.org/gene/765911:THIVI_RS04560 ^@ http://purl.uniprot.org/uniprot/I3Y7K1 ^@ Similarity ^@ Belongs to the UPF0125 (RnfH) family. http://togogenome.org/gene/765911:THIVI_RS25795 ^@ http://purl.uniprot.org/uniprot/I3YCB6 ^@ Subcellular Location Annotation ^@ Cytoplasm http://togogenome.org/gene/765911:THIVI_RS14845 ^@ http://purl.uniprot.org/uniprot/I3YD74 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the CcmB/CycW/HelB family.|||Cell inner membrane|||Membrane|||Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes. http://togogenome.org/gene/765911:THIVI_RS20540 ^@ http://purl.uniprot.org/uniprot/I3YGE5 ^@ Similarity ^@ Belongs to the asparagine synthetase family. http://togogenome.org/gene/765911:THIVI_RS15460 ^@ http://purl.uniprot.org/uniprot/I3YDJ7 ^@ Caution|||Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ A translation factor that gates the progression of the 70S ribosomal initiation complex (IC, containing tRNA(fMet) in the P-site) into the translation elongation cycle by using a mechanism sensitive to the ATP/ADP ratio. Binds to the 70S ribosome E-site where it modulates the state of the translating ribosome during subunit translocation. ATP hydrolysis probably frees it from the ribosome, which can enter the elongation phase.|||Belongs to the ABC transporter superfamily. ABCF family. Translational throttle EttA subfamily.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer. Probably contacts ribosomal proteins L1, L5, L33 and S7, the 16S and 23S rRNA and the P-site containing tRNA(fMet).|||The P-site tRNA interaction motif (PtIM domain) probably interacts with the P-site tRNA(fMet) as well as the 23S rRNA.|||The arm domain is inserted in the first ABC transporter domain. Probably contacts ribosomal protein L1. http://togogenome.org/gene/765911:THIVI_RS19675 ^@ http://purl.uniprot.org/uniprot/I3YFX8 ^@ Subcellular Location Annotation ^@ Mitochondrion http://togogenome.org/gene/765911:THIVI_RS19745 ^@ http://purl.uniprot.org/uniprot/I3YFZ1 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS18645 ^@ http://purl.uniprot.org/uniprot/I3YFC8 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the 2-oxoacid dehydrogenase family.|||Binds 1 lipoyl cofactor covalently.|||E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2-oxoglutarate to succinyl-CoA and CO(2). http://togogenome.org/gene/765911:THIVI_RS08995 ^@ http://purl.uniprot.org/uniprot/I3YA10 ^@ Function|||Similarity ^@ Belongs to the RlpA family.|||Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. http://togogenome.org/gene/765911:THIVI_RS23025 ^@ http://purl.uniprot.org/uniprot/I3YEZ1 ^@ Similarity ^@ Belongs to the peptidase C1 family. http://togogenome.org/gene/765911:THIVI_RS01270 ^@ http://purl.uniprot.org/uniprot/I3Y5R3 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the ABC transporter superfamily. ABCF family. Uup subfamily.|||Cytoplasm|||Probably plays a role in ribosome assembly or function. May be involved in resolution of branched DNA intermediates that result from template switching in postreplication gaps. Binds DNA and has ATPase activity. http://togogenome.org/gene/765911:THIVI_RS11215 ^@ http://purl.uniprot.org/uniprot/I3YB98 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the glycosyltransferase 28 family. MurG subfamily.|||Cell inner membrane|||Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc-(pentapeptide)GlcNAc (lipid intermediate II). http://togogenome.org/gene/765911:THIVI_RS20765 ^@ http://purl.uniprot.org/uniprot/I3YGJ1 ^@ Similarity ^@ Belongs to the pseudouridine synthase RsuA family. http://togogenome.org/gene/765911:THIVI_RS09350 ^@ http://purl.uniprot.org/uniprot/I3YA72 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the NqrDE/RnfAE family.|||Cell inner membrane|||Membrane|||Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.|||The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG. http://togogenome.org/gene/765911:THIVI_RS05685 ^@ http://purl.uniprot.org/uniprot/I3Y878 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS02410 ^@ http://purl.uniprot.org/uniprot/I3Y6E1 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.|||Cell membrane|||Heterodimer of a large and a small subunit. http://togogenome.org/gene/765911:THIVI_RS20085 ^@ http://purl.uniprot.org/uniprot/I3YG57 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the thioredoxin family. DsbA subfamily.|||Periplasm http://togogenome.org/gene/765911:THIVI_RS08150 ^@ http://purl.uniprot.org/uniprot/I3Y9J2 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the vitamin-B12 independent methionine synthase family.|||Binds 1 zinc ion per subunit.|||Binds 2 Zn(2+) ions per subunit.|||Catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine resulting in methionine formation. http://togogenome.org/gene/765911:THIVI_RS04460 ^@ http://purl.uniprot.org/uniprot/I3Y7I1 ^@ Similarity ^@ Belongs to the folylpolyglutamate synthase family. http://togogenome.org/gene/765911:THIVI_RS01055 ^@ http://purl.uniprot.org/uniprot/I3Y5L9 ^@ Similarity ^@ Belongs to the HAD-like hydrolase superfamily. SerB family. http://togogenome.org/gene/765911:THIVI_RS09220 ^@ http://purl.uniprot.org/uniprot/I3YA54 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the thioredoxin family. DsbA subfamily.|||Periplasm http://togogenome.org/gene/765911:THIVI_RS15440 ^@ http://purl.uniprot.org/uniprot/I3YDJ3 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the NqrDE/RnfAE family.|||Cell inner membrane|||Membrane|||Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.|||The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG. http://togogenome.org/gene/765911:THIVI_RS07370 ^@ http://purl.uniprot.org/uniprot/I3Y951 ^@ Similarity ^@ Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. http://togogenome.org/gene/765911:THIVI_RS15885 ^@ http://purl.uniprot.org/uniprot/I3YDT2 ^@ Function|||Similarity ^@ Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.|||Synthesizes alpha-1,4-glucan chains using ADP-glucose. http://togogenome.org/gene/765911:THIVI_RS01210 ^@ http://purl.uniprot.org/uniprot/I3Y5Q0 ^@ Similarity ^@ Belongs to the threonine synthase family. http://togogenome.org/gene/765911:THIVI_RS08530 ^@ http://purl.uniprot.org/uniprot/I3Y9R9 ^@ Function|||Similarity|||Subunit ^@ Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. BioF subfamily.|||Catalyzes the decarboxylative condensation of pimeloyl-[acyl-carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS03225 ^@ http://purl.uniprot.org/uniprot/I3Y6U7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the chaperonin (HSP60) family.|||Cytoplasm|||Forms a cylinder of 14 subunits composed of two heptameric rings stacked back-to-back. Interacts with the co-chaperonin GroES.|||Together with its co-chaperonin GroES, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding. http://togogenome.org/gene/765911:THIVI_RS01340 ^@ http://purl.uniprot.org/uniprot/I3Y5S7 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.|||Belongs to the antenna complex beta subunit family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS03625 ^@ http://purl.uniprot.org/uniprot/I3Y727 ^@ Similarity ^@ Belongs to the aspartokinase family. http://togogenome.org/gene/765911:THIVI_RS20825 ^@ http://purl.uniprot.org/uniprot/I3YGK3 ^@ Similarity ^@ Belongs to the carbohydrate kinase PfkB family. http://togogenome.org/gene/765911:THIVI_RS14490 ^@ http://purl.uniprot.org/uniprot/I3YD06 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ABC transporter superfamily.|||Cell inner membrane|||Homodimer. Forms a membrane-associated complex with FtsX.|||Part of the ABC transporter FtsEX involved in cellular division. Important for assembly or stability of the septal ring. http://togogenome.org/gene/765911:THIVI_RS06840 ^@ http://purl.uniprot.org/uniprot/I3Y8V1 ^@ Subcellular Location Annotation ^@ Cell outer membrane http://togogenome.org/gene/765911:THIVI_RS00135 ^@ http://purl.uniprot.org/uniprot/I3Y547 ^@ Function|||Similarity ^@ Belongs to the thymidylate kinase family.|||Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis. http://togogenome.org/gene/765911:THIVI_RS16295 ^@ http://purl.uniprot.org/uniprot/I3YE13 ^@ Similarity ^@ Belongs to the P(II) protein family. http://togogenome.org/gene/765911:THIVI_RS00375 ^@ http://purl.uniprot.org/uniprot/I3Y593 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the NqrDE/RnfAE family.|||Cell inner membrane|||Membrane|||Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.|||The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG. http://togogenome.org/gene/765911:THIVI_RS10970 ^@ http://purl.uniprot.org/uniprot/I3YB49 ^@ Function|||Subunit ^@ Catalyzes the synthesis of GMP from XMP.|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS20885 ^@ http://purl.uniprot.org/uniprot/I3YGL4 ^@ Cofactor ^@ Binds 2 Mg(2+) ions per monomer. http://togogenome.org/gene/765911:THIVI_RS20620 ^@ http://purl.uniprot.org/uniprot/I3YGG2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS02595 ^@ http://purl.uniprot.org/uniprot/I3Y6H6 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the LapB family.|||Cell inner membrane|||Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane. http://togogenome.org/gene/765911:THIVI_RS10040 ^@ http://purl.uniprot.org/uniprot/I3YAL7 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the UreE family.|||Cytoplasm|||Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. http://togogenome.org/gene/765911:THIVI_RS06940 ^@ http://purl.uniprot.org/uniprot/I3Y8X4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the TonB-dependent receptor family.|||Cell outer membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS19270 ^@ http://purl.uniprot.org/uniprot/I3YFQ4 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS05200 ^@ http://purl.uniprot.org/uniprot/I3Y7X9 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS08455 ^@ http://purl.uniprot.org/uniprot/I3Y9Q4 ^@ Similarity ^@ Belongs to the methyltransferase superfamily. L-isoaspartyl/D-aspartyl protein methyltransferase family. http://togogenome.org/gene/765911:THIVI_RS10820 ^@ http://purl.uniprot.org/uniprot/I3YB19 ^@ Caution|||Domain|||Function|||Miscellaneous|||Similarity|||Subunit ^@ Belongs to the HPrK/P family.|||Both phosphorylation and phosphorolysis are carried out by the same active site and suggest a common mechanism for both reactions.|||Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr).|||Homohexamer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||The Walker A ATP-binding motif also binds Pi and PPi. http://togogenome.org/gene/765911:THIVI_RS21685 ^@ http://purl.uniprot.org/uniprot/I3YH15 ^@ Function|||Similarity ^@ Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.|||Synthesizes alpha-1,4-glucan chains using ADP-glucose. http://togogenome.org/gene/765911:THIVI_RS12490 ^@ http://purl.uniprot.org/uniprot/I3YBZ3 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS12595 ^@ http://purl.uniprot.org/uniprot/I3YC15 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS06595 ^@ http://purl.uniprot.org/uniprot/I3Y8P9 ^@ Similarity ^@ Belongs to the AlaDH/PNT family. http://togogenome.org/gene/765911:THIVI_RS20075 ^@ http://purl.uniprot.org/uniprot/I3YG55 ^@ Function|||Similarity ^@ Belongs to the helicase family. RecG subfamily.|||Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA). http://togogenome.org/gene/765911:THIVI_RS21660 ^@ http://purl.uniprot.org/uniprot/I3YH10 ^@ PTM ^@ Binds 2 heme c groups covalently per subunit. http://togogenome.org/gene/765911:THIVI_RS12250 ^@ http://purl.uniprot.org/uniprot/I3YBU6 ^@ Similarity ^@ Belongs to the ModE family. http://togogenome.org/gene/765911:THIVI_RS07920 ^@ http://purl.uniprot.org/uniprot/I3Y9F0 ^@ Function|||Similarity ^@ Antitoxin component of a type II toxin-antitoxin (TA) system.|||Belongs to the phD/YefM antitoxin family. http://togogenome.org/gene/765911:THIVI_RS22340 ^@ http://purl.uniprot.org/uniprot/I3YHE8 ^@ Similarity ^@ Belongs to the 6-phosphogluconate dehydrogenase family. http://togogenome.org/gene/765911:THIVI_RS20205 ^@ http://purl.uniprot.org/uniprot/I3YG81 ^@ Similarity ^@ Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. http://togogenome.org/gene/765911:THIVI_RS17750 ^@ http://purl.uniprot.org/uniprot/I3YEU6 ^@ Function|||Similarity|||Subunit ^@ Belongs to the polyphosphate kinase 2 (PPK2) family. Class I subfamily.|||Homotetramer.|||Uses inorganic polyphosphate (polyP) as a donor to convert GDP to GTP or ADP to ATP. http://togogenome.org/gene/765911:THIVI_RS06875 ^@ http://purl.uniprot.org/uniprot/G4DT07 ^@ Similarity ^@ Belongs to the transposase 11 family. http://togogenome.org/gene/765911:THIVI_RS07550 ^@ http://purl.uniprot.org/uniprot/I3Y984 ^@ Function|||Similarity ^@ Belongs to the bacterial ribosomal protein bL20 family.|||Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. http://togogenome.org/gene/765911:THIVI_RS11320 ^@ http://purl.uniprot.org/uniprot/I3YBB9 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the class II fructose-bisphosphate aldolase family.|||Binds 2 Zn(2+) ions per subunit. One is catalytic and the other provides a structural contribution.|||Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.|||One is catalytic and the other provides a structural contribution. http://togogenome.org/gene/765911:THIVI_RS17535 ^@ http://purl.uniprot.org/uniprot/I3YEQ5 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS19530 ^@ http://purl.uniprot.org/uniprot/I3YFU4 ^@ Similarity ^@ Belongs to the ABC transporter superfamily. http://togogenome.org/gene/765911:THIVI_RS18955 ^@ http://purl.uniprot.org/uniprot/I3YFJ0 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I subunit 4L family.|||Cell inner membrane|||Membrane|||NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/765911:THIVI_RS18420 ^@ http://purl.uniprot.org/uniprot/I3YF80 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ExbD/TolR family.|||Cell membrane http://togogenome.org/gene/765911:THIVI_RS00115 ^@ http://purl.uniprot.org/uniprot/I3Y543 ^@ Function|||PTM|||Similarity|||Subcellular Location Annotation ^@ 4'-phosphopantetheine is transferred from CoA to a specific serine of apo-ACP by AcpS. This modification is essential for activity because fatty acids are bound in thioester linkage to the sulfhydryl of the prosthetic group.|||4'-phosphopantetheine is transferred from CoA to a specific serine of apo-ACP by acpS.|||Belongs to the acyl carrier protein (ACP) family.|||Carrier of the growing fatty acid chain in fatty acid biosynthesis.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS03435 ^@ http://purl.uniprot.org/uniprot/I3Y6Z1 ^@ Caution|||Similarity|||Subcellular Location Annotation ^@ Belongs to the major facilitator superfamily. Bcr/CmlA family.|||Cell inner membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane http://togogenome.org/gene/765911:THIVI_RS09655 ^@ http://purl.uniprot.org/uniprot/U3GJL5 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the reaction center PufL/M/PsbA/D family.|||Cellular chromatophore membrane|||Membrane|||Reaction center is composed of four bacteriochlorophylls, two bacteriopheophytins, two ubiquinones, one iron, and highly hydrophobic polypeptide chains.|||The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. http://togogenome.org/gene/765911:THIVI_RS15925 ^@ http://purl.uniprot.org/uniprot/I3YDU1 ^@ Similarity ^@ Belongs to the HesB/IscA family. http://togogenome.org/gene/765911:THIVI_RS09985 ^@ http://purl.uniprot.org/uniprot/I3YAK8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ A 50S ribosomal subunit assembly protein with GTPase activity, required for 50S subunit assembly at low temperatures, may also play a role in translation. Binds GTP and analogs. Binds the 70S ribosome between the 30S and 50S subunits, in a similar position as ribosome-bound EF-G; it contacts a number of ribosomal proteins, both rRNAs and the A-site tRNA.|||Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. BipA subfamily.|||Cytoplasm|||Monomer. http://togogenome.org/gene/765911:THIVI_RS20290 ^@ http://purl.uniprot.org/uniprot/I3YG82 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.|||Cytoplasm|||Monomer.|||This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis. http://togogenome.org/gene/765911:THIVI_RS13390 ^@ http://purl.uniprot.org/uniprot/I3YCF5 ^@ Function|||Similarity|||Subunit ^@ Belongs to the transferase hexapeptide repeat family. LpxD subfamily.|||Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.|||Homotrimer. http://togogenome.org/gene/765911:THIVI_RS20310 ^@ http://purl.uniprot.org/uniprot/I3YG98 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL23 family.|||One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome.|||Part of the 50S ribosomal subunit. Contacts protein L29, and trigger factor when it is bound to the ribosome. http://togogenome.org/gene/765911:THIVI_RS11970 ^@ http://purl.uniprot.org/uniprot/I3YBP2 ^@ Caution|||Function|||Subunit ^@ Homotetramer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. http://togogenome.org/gene/765911:THIVI_RS19380 ^@ http://purl.uniprot.org/uniprot/I3YFS5 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the XseB family.|||Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.|||Cytoplasm|||Heterooligomer composed of large and small subunits. http://togogenome.org/gene/765911:THIVI_RS15260 ^@ http://purl.uniprot.org/uniprot/I3YDF8 ^@ Similarity ^@ Belongs to the inositol monophosphatase superfamily. http://togogenome.org/gene/765911:THIVI_RS08005 ^@ http://purl.uniprot.org/uniprot/G4DT07 ^@ Similarity ^@ Belongs to the transposase 11 family. http://togogenome.org/gene/765911:THIVI_RS14555 ^@ http://purl.uniprot.org/uniprot/I3YD18 ^@ Similarity ^@ Belongs to the peptidase M16 family. http://togogenome.org/gene/765911:THIVI_RS17360 ^@ http://purl.uniprot.org/uniprot/I3YEM6 ^@ Similarity ^@ Belongs to the methylenetetrahydrofolate reductase family. http://togogenome.org/gene/765911:THIVI_RS05430 ^@ http://purl.uniprot.org/uniprot/I3Y827 ^@ Similarity ^@ Belongs to the GARS family. http://togogenome.org/gene/765911:THIVI_RS18215 ^@ http://purl.uniprot.org/uniprot/I3YF40 ^@ Similarity ^@ Belongs to the glycosyl hydrolase 13 family. http://togogenome.org/gene/765911:THIVI_RS13870 ^@ http://purl.uniprot.org/uniprot/I3YCQ1 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the shikimate kinase family.|||Binds 1 Mg(2+) ion per subunit.|||Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate.|||Cytoplasm|||Monomer. http://togogenome.org/gene/765911:THIVI_RS03100 ^@ http://purl.uniprot.org/uniprot/I3Y6S2 ^@ Cofactor|||Similarity ^@ Belongs to the ETF alpha-subunit/FixB family.|||Binds 1 FAD per dimer. http://togogenome.org/gene/765911:THIVI_RS16555 ^@ http://purl.uniprot.org/uniprot/I3YE67 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS10145 ^@ http://purl.uniprot.org/uniprot/I3YAN7 ^@ Similarity ^@ Belongs to the methyl-accepting chemotaxis (MCP) protein family. http://togogenome.org/gene/765911:THIVI_RS11655 ^@ http://purl.uniprot.org/uniprot/I3YBI5 ^@ Similarity ^@ Belongs to the Mg-chelatase subunit H family. http://togogenome.org/gene/765911:THIVI_RS03465 ^@ http://purl.uniprot.org/uniprot/I3Y6Z7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the GroES chaperonin family.|||Cytoplasm|||Heptamer of 7 subunits arranged in a ring. Interacts with the chaperonin GroEL.|||Together with the chaperonin GroEL, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding. GroES binds to the apical surface of the GroEL ring, thereby capping the opening of the GroEL channel. http://togogenome.org/gene/765911:THIVI_RS05950 ^@ http://purl.uniprot.org/uniprot/I3Y8C5 ^@ Function|||Similarity ^@ Belongs to the CheD family.|||Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis. http://togogenome.org/gene/765911:THIVI_RS07200 ^@ http://purl.uniprot.org/uniprot/I3Y920 ^@ Similarity ^@ Belongs to the CbbQ/NirQ/NorQ/GpvN family. http://togogenome.org/gene/765911:THIVI_RS09995 ^@ http://purl.uniprot.org/uniprot/I3YAL0 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ A Gly-cisPro motif from one monomer fits into the active site of the other monomer to allow specific chiral rejection of L-amino acids.|||An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA-based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality.|||Belongs to the DTD family.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS02395 ^@ http://purl.uniprot.org/uniprot/I3Y6D8 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS15605 ^@ http://purl.uniprot.org/uniprot/I3YDM8 ^@ Cofactor|||Similarity ^@ Belongs to the RimK family.|||Binds 2 magnesium or manganese ions per subunit. http://togogenome.org/gene/765911:THIVI_RS17185 ^@ http://purl.uniprot.org/uniprot/G4DT07 ^@ Similarity ^@ Belongs to the transposase 11 family. http://togogenome.org/gene/765911:THIVI_RS08305 ^@ http://purl.uniprot.org/uniprot/I3Y9M3 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/765911:THIVI_RS03500 ^@ http://purl.uniprot.org/uniprot/I3Y703 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the CobS family.|||Cell inner membrane|||Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate.|||Membrane http://togogenome.org/gene/765911:THIVI_RS11685 ^@ http://purl.uniprot.org/uniprot/I3YBJ1 ^@ Similarity ^@ Belongs to the geranylgeranyl reductase family. ChlP subfamily. http://togogenome.org/gene/765911:THIVI_RS12565 ^@ http://purl.uniprot.org/uniprot/I3YC09 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ATPase gamma chain family.|||Cell inner membrane|||F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.|||Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. http://togogenome.org/gene/765911:THIVI_RS10840 ^@ http://purl.uniprot.org/uniprot/I3YB23 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the PEP-utilizing enzyme family.|||Cytoplasm|||General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr). http://togogenome.org/gene/765911:THIVI_RS20070 ^@ http://purl.uniprot.org/uniprot/I3YG54 ^@ Similarity ^@ Belongs to the UPF0047 family. http://togogenome.org/gene/765911:THIVI_RS07615 ^@ http://purl.uniprot.org/uniprot/I3Y996 ^@ Caution|||Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the RuvB family.|||Cytoplasm|||Has 3 domains, the large (RuvB-L) and small ATPase (RuvB-S) domains and the C-terminal head (RuvB-H) domain. The head domain binds DNA, while the ATPase domains jointly bind ATP, ADP or are empty depending on the state of the subunit in the translocation cycle. During a single DNA translocation step the structure of each domain remains the same, but their relative positions change.|||Homohexamer. Forms an RuvA(8)-RuvB(12)-Holliday junction (HJ) complex. HJ DNA is sandwiched between 2 RuvA tetramers; dsDNA enters through RuvA and exits via RuvB. An RuvB hexamer assembles on each DNA strand where it exits the tetramer. Each RuvB hexamer is contacted by two RuvA subunits (via domain III) on 2 adjacent RuvB subunits; this complex drives branch migration. In the full resolvosome a probable DNA-RuvA(4)-RuvB(12)-RuvC(2) complex forms which resolves the HJ.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||The RuvA-RuvB-RuvC complex processes Holliday junction (HJ) DNA during genetic recombination and DNA repair, while the RuvA-RuvB complex plays an important role in the rescue of blocked DNA replication forks via replication fork reversal (RFR). RuvA specifically binds to HJ cruciform DNA, conferring on it an open structure. The RuvB hexamer acts as an ATP-dependent pump, pulling dsDNA into and through the RuvAB complex. RuvB forms 2 homohexamers on either side of HJ DNA bound by 1 or 2 RuvA tetramers; 4 subunits per hexamer contact DNA at a time. Coordinated motions by a converter formed by DNA-disengaged RuvB subunits stimulates ATP hydrolysis and nucleotide exchange. Immobilization of the converter enables RuvB to convert the ATP-contained energy into a lever motion, pulling 2 nucleotides of DNA out of the RuvA tetramer per ATP hydrolyzed, thus driving DNA branch migration. The RuvB motors rotate together with the DNA substrate, which together with the progressing nucleotide cycle form the mechanistic basis for DNA recombination by continuous HJ branch migration. Branch migration allows RuvC to scan DNA until it finds its consensus sequence, where it cleaves and resolves cruciform DNA. http://togogenome.org/gene/765911:THIVI_RS22215 ^@ http://purl.uniprot.org/uniprot/I3YHC0 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the GrpE family.|||Cytoplasm|||Homodimer.|||Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. http://togogenome.org/gene/765911:THIVI_RS13400 ^@ http://purl.uniprot.org/uniprot/I3YCF7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the transferase hexapeptide repeat family. LpxA subfamily.|||Cytoplasm|||Homotrimer.|||Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. http://togogenome.org/gene/765911:THIVI_RS19910 ^@ http://purl.uniprot.org/uniprot/I3YG22 ^@ Function ^@ Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. http://togogenome.org/gene/765911:THIVI_RS16240 ^@ http://purl.uniprot.org/uniprot/I3YE02 ^@ Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.|||Belongs to the peroxiredoxin family. Prx6 subfamily.|||Cytoplasm|||Homodecamer. Pentamer of dimers that assemble into a ring structure.|||The active site is a conserved redox-active cysteine residue, the peroxidatic cysteine (C(P)), which makes the nucleophilic attack on the peroxide substrate. The peroxide oxidizes the C(P)-SH to cysteine sulfenic acid (C(P)-SOH), which then reacts with another cysteine residue, the resolving cysteine (C(R)), to form a disulfide bridge. The disulfide is subsequently reduced by an appropriate electron donor to complete the catalytic cycle. Although the primary sequence of this enzyme is similar to those of the 1-Cys Prx6 enzymes, its catalytic properties resemble those of the typical 2-Cys Prxs and C(R) is provided by the other dimeric subunit to form an intersubunit disulfide. The disulfide is subsequently reduced by thioredoxin.|||Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. http://togogenome.org/gene/765911:THIVI_RS05350 ^@ http://purl.uniprot.org/uniprot/I3Y812 ^@ Function|||Similarity|||Subunit ^@ Belongs to the type-II 3-dehydroquinase family.|||Catalyzes a trans-dehydration via an enolate intermediate.|||Homododecamer. http://togogenome.org/gene/765911:THIVI_RS17370 ^@ http://purl.uniprot.org/uniprot/G4DT07 ^@ Similarity ^@ Belongs to the transposase 11 family. http://togogenome.org/gene/765911:THIVI_RS19930 ^@ http://purl.uniprot.org/uniprot/I3YG26 ^@ Similarity ^@ Belongs to the peptidase U62 family. http://togogenome.org/gene/765911:THIVI_RS02445 ^@ http://purl.uniprot.org/uniprot/I3Y6E8 ^@ Similarity ^@ Belongs to the peptidase U62 family. http://togogenome.org/gene/765911:THIVI_RS08960 ^@ http://purl.uniprot.org/uniprot/I3YA04 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the endoribonuclease YbeY family.|||Binds 1 zinc ion.|||Cytoplasm|||Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. http://togogenome.org/gene/765911:THIVI_RS12115 ^@ http://purl.uniprot.org/uniprot/I3YBR9 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the OadG family.|||Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation.|||Cell membrane|||Heterotrimer of an alpha, a beta and a gamma subunit.|||Membrane http://togogenome.org/gene/765911:THIVI_RS18530 ^@ http://purl.uniprot.org/uniprot/I3YFA2 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the MreD family.|||Cell inner membrane|||Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins.|||Membrane http://togogenome.org/gene/765911:THIVI_RS18875 ^@ http://purl.uniprot.org/uniprot/I3YFH5 ^@ Similarity ^@ Belongs to the type-I restriction system S methylase family. http://togogenome.org/gene/765911:THIVI_RS14750 ^@ http://purl.uniprot.org/uniprot/I3YD53 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.|||Cell inner membrane|||Involved in the import of queuosine (Q) precursors, required for Q precursor salvage. http://togogenome.org/gene/765911:THIVI_RS00430 ^@ http://purl.uniprot.org/uniprot/I3Y5A4 ^@ Similarity ^@ Belongs to the universal stress protein A family. http://togogenome.org/gene/765911:THIVI_RS08970 ^@ http://purl.uniprot.org/uniprot/I3YA06 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the methylthiotransferase family. MiaB subfamily.|||Binds 2 [4Fe-4S] clusters. One cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.|||Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.|||Cytoplasm|||Monomer. http://togogenome.org/gene/765911:THIVI_RS01635 ^@ http://purl.uniprot.org/uniprot/I3Y5Z0 ^@ Similarity ^@ Belongs to the methyl-accepting chemotaxis (MCP) protein family. http://togogenome.org/gene/765911:THIVI_RS13410 ^@ http://purl.uniprot.org/uniprot/I3YCF9 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the RNase HII family.|||Cytoplasm|||Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.|||Manganese or magnesium. Binds 1 divalent metal ion per monomer in the absence of substrate. May bind a second metal ion after substrate binding. http://togogenome.org/gene/765911:THIVI_RS02560 ^@ http://purl.uniprot.org/uniprot/I3Y6G9 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS20845 ^@ http://purl.uniprot.org/uniprot/I3YGK5 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS15180 ^@ http://purl.uniprot.org/uniprot/I3YDE2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS16505 ^@ http://purl.uniprot.org/uniprot/I3YE56 ^@ Cofactor|||Miscellaneous|||Similarity ^@ Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.|||Binds 1 FAD per subunit.|||The active site is a redox-active disulfide bond. http://togogenome.org/gene/765911:THIVI_RS16205 ^@ http://purl.uniprot.org/uniprot/I3YDZ5 ^@ Function|||Similarity ^@ Belongs to the EIF-2B alpha/beta/delta subunits family. MtnA subfamily.|||Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). http://togogenome.org/gene/765911:THIVI_RS10995 ^@ http://purl.uniprot.org/uniprot/I3YB55 ^@ Similarity ^@ Belongs to the ribonucleoside diphosphate reductase small chain family. http://togogenome.org/gene/765911:THIVI_RS02390 ^@ http://purl.uniprot.org/uniprot/I3Y6D7 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS11660 ^@ http://purl.uniprot.org/uniprot/I3YBI6 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the ChlB/BchB/BchZ family.|||Binds 1 [4Fe-4S] cluster per heterodimer. The cluster is bound at the heterodimer interface by residues from both subunits.|||Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex.|||Protochlorophyllide reductase is composed of three subunits; BchL, BchN and BchB. Forms a heterotetramer of two BchB and two BchN subunits. http://togogenome.org/gene/765911:THIVI_RS21895 ^@ http://purl.uniprot.org/uniprot/I3YH56 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the IspH family.|||Binds 1 [4Fe-4S] cluster per subunit.|||Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. http://togogenome.org/gene/765911:THIVI_RS18970 ^@ http://purl.uniprot.org/uniprot/I3YFJ3 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I subunit 2 family.|||Cell inner membrane|||Membrane|||NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/765911:THIVI_RS16690 ^@ http://purl.uniprot.org/uniprot/I3YE95 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS13265 ^@ http://purl.uniprot.org/uniprot/I3YCD0 ^@ Caution|||Cofactor|||Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation ^@ Belongs to the radical SAM superfamily. RlmN family.|||Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Reaction proceeds by a ping-pong mechanism involving intermediate methylation of a conserved cysteine residue.|||Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity. http://togogenome.org/gene/765911:THIVI_RS01200 ^@ http://purl.uniprot.org/uniprot/I3Y5P8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS12555 ^@ http://purl.uniprot.org/uniprot/I3YC07 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ATPase epsilon chain family.|||Cell inner membrane|||F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.|||Membrane|||Produces ATP from ADP in the presence of a proton gradient across the membrane. http://togogenome.org/gene/765911:THIVI_RS20720 ^@ http://purl.uniprot.org/uniprot/I3YGI2 ^@ Function|||Similarity ^@ Belongs to the alpha-IPM synthase/homocitrate synthase family.|||This protein is a Fe-Mo-cofactor biosynthetic component. http://togogenome.org/gene/765911:THIVI_RS13375 ^@ http://purl.uniprot.org/uniprot/I3YCF2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the peptidase M50B family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS08865 ^@ http://purl.uniprot.org/uniprot/I3Y9Y4 ^@ Subcellular Location Annotation ^@ Cell inner membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS20285 ^@ http://purl.uniprot.org/uniprot/I3YG93 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.|||Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS03360 ^@ http://purl.uniprot.org/uniprot/I3Y6X5 ^@ Function|||Similarity ^@ Belongs to the DHPS family.|||Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives. http://togogenome.org/gene/765911:THIVI_RS05585 ^@ http://purl.uniprot.org/uniprot/I3Y858 ^@ Function|||PTM|||Similarity|||Subcellular Location Annotation ^@ Belongs to the HSP33 family.|||Cytoplasm|||Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.|||Under oxidizing conditions two disulfide bonds are formed involving the reactive cysteines. Under reducing conditions zinc is bound to the reactive cysteines and the protein is inactive. http://togogenome.org/gene/765911:THIVI_RS18435 ^@ http://purl.uniprot.org/uniprot/I3YF83 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.|||Belongs to the KdsB family.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS21060 ^@ http://purl.uniprot.org/uniprot/I3YGP8 ^@ Function|||Similarity ^@ Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily.|||Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. http://togogenome.org/gene/765911:THIVI_RS04625 ^@ http://purl.uniprot.org/uniprot/I3Y7L4 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the IF-1 family.|||Component of the 30S ribosomal translation pre-initiation complex which assembles on the 30S ribosome in the order IF-2 and IF-3, IF-1 and N-formylmethionyl-tRNA(fMet); mRNA recruitment can occur at any time during PIC assembly.|||Cytoplasm|||One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. http://togogenome.org/gene/765911:THIVI_RS14860 ^@ http://purl.uniprot.org/uniprot/I3YD77 ^@ Function|||Similarity ^@ Belongs to the CcmH/CycL/Ccl2/NrfF family.|||Possible subunit of a heme lyase. http://togogenome.org/gene/765911:THIVI_RS08465 ^@ http://purl.uniprot.org/uniprot/I3Y9Q6 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS19385 ^@ http://purl.uniprot.org/uniprot/I3YFS6 ^@ Similarity ^@ Belongs to the FPP/GGPP synthase family. http://togogenome.org/gene/765911:THIVI_RS04380 ^@ http://purl.uniprot.org/uniprot/I3Y7G5 ^@ Similarity ^@ Belongs to the transglycosylase Slt family. http://togogenome.org/gene/765911:THIVI_RS14975 ^@ http://purl.uniprot.org/uniprot/I3YDA0 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the shikimate dehydrogenase family.|||Homodimer.|||Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS08155 ^@ http://purl.uniprot.org/uniprot/I3Y9J3 ^@ Function|||Similarity ^@ Belongs to the HPPK family.|||Catalyzes the transfer of pyrophosphate from adenosine triphosphate (ATP) to 6-hydroxymethyl-7,8-dihydropterin, an enzymatic step in folate biosynthesis pathway. http://togogenome.org/gene/765911:THIVI_RS20895 ^@ http://purl.uniprot.org/uniprot/I3YGL6 ^@ Function|||Similarity ^@ Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily.|||Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA. http://togogenome.org/gene/765911:THIVI_RS05775 ^@ http://purl.uniprot.org/uniprot/I3Y894 ^@ Function|||Similarity|||Subunit ^@ Belongs to the bacterial ribosomal protein bS18 family.|||Binds as a heterodimer with protein bS6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.|||Part of the 30S ribosomal subunit. Forms a tight heterodimer with protein bS6. http://togogenome.org/gene/765911:THIVI_RS02460 ^@ http://purl.uniprot.org/uniprot/I3Y6F0 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS13210 ^@ http://purl.uniprot.org/uniprot/I3YCB9 ^@ Similarity ^@ Belongs to the UPF0758 family. http://togogenome.org/gene/765911:THIVI_RS12645 ^@ http://purl.uniprot.org/uniprot/I3YC25 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the transferase hexapeptide repeat family.|||Cytoplasm|||Homotrimer. http://togogenome.org/gene/765911:THIVI_RS14960 ^@ http://purl.uniprot.org/uniprot/I3YD97 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.|||Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr).|||Cytoplasm|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS19310 ^@ http://purl.uniprot.org/uniprot/I3YFR2 ^@ Cofactor ^@ Can also use Mn(2+) ion. http://togogenome.org/gene/765911:THIVI_RS16310 ^@ http://purl.uniprot.org/uniprot/I3YE16 ^@ Similarity ^@ Belongs to the purine nucleoside phosphorylase YfiH/LACC1 family. http://togogenome.org/gene/765911:THIVI_RS14930 ^@ http://purl.uniprot.org/uniprot/I3YD91 ^@ Cofactor|||Similarity ^@ Belongs to the rubredoxin family.|||Binds 1 Fe(3+) ion per subunit. http://togogenome.org/gene/765911:THIVI_RS22040 ^@ http://purl.uniprot.org/uniprot/I3YH85 ^@ Similarity ^@ Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. http://togogenome.org/gene/765911:THIVI_RS07930 ^@ http://purl.uniprot.org/uniprot/G4DT07 ^@ Similarity ^@ Belongs to the transposase 11 family. http://togogenome.org/gene/765911:THIVI_RS18810 ^@ http://purl.uniprot.org/uniprot/G4DT07 ^@ Similarity ^@ Belongs to the transposase 11 family. http://togogenome.org/gene/765911:THIVI_RS19830 ^@ http://purl.uniprot.org/uniprot/I3YG06 ^@ Similarity ^@ Belongs to the peptidase U62 family. http://togogenome.org/gene/765911:THIVI_RS14875 ^@ http://purl.uniprot.org/uniprot/I3YD80 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the CcmE/CycJ family.|||Cell inner membrane|||Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. http://togogenome.org/gene/765911:THIVI_RS09575 ^@ http://purl.uniprot.org/uniprot/I3YAC1 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.|||Belongs to the antenna complex beta subunit family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS04355 ^@ http://purl.uniprot.org/uniprot/I3Y7G0 ^@ Similarity ^@ Belongs to the glutathione peroxidase family. http://togogenome.org/gene/765911:THIVI_RS04605 ^@ http://purl.uniprot.org/uniprot/I3Y7L0 ^@ Cofactor|||Similarity|||Subunit ^@ Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family.|||Binds 1 FAD per subunit.|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS02375 ^@ http://purl.uniprot.org/uniprot/I3Y6D4 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the acetokinase family.|||Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction.|||Cytoplasm|||Homodimer.|||Mg(2+). Can also accept Mn(2+). http://togogenome.org/gene/765911:THIVI_RS04360 ^@ http://purl.uniprot.org/uniprot/I3Y7G1 ^@ Similarity ^@ Belongs to the ferredoxin--NADP reductase type 1 family. http://togogenome.org/gene/765911:THIVI_RS09285 ^@ http://purl.uniprot.org/uniprot/I3YA60 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the GTP-binding SRP family. SRP54 subfamily.|||Composed of three domains: the N-terminal N domain, which is responsible for interactions with the ribosome, the central G domain, which binds GTP, and the C-terminal M domain, which binds the RNA and the signal sequence of the RNC.|||Cytoplasm|||Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.|||Part of the signal recognition particle protein translocation system, which is composed of SRP and FtsY. SRP is a ribonucleoprotein composed of Ffh and a 4.5S RNA molecule. http://togogenome.org/gene/765911:THIVI_RS20345 ^@ http://purl.uniprot.org/uniprot/I3YGA5 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS17 family.|||One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.|||Part of the 30S ribosomal subunit. http://togogenome.org/gene/765911:THIVI_RS15430 ^@ http://purl.uniprot.org/uniprot/I3YDJ1 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the NqrB/RnfD family.|||Cell inner membrane|||Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.|||The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG. http://togogenome.org/gene/765911:THIVI_RS18085 ^@ http://purl.uniprot.org/uniprot/I3YF16 ^@ Function|||Similarity ^@ Belongs to the DNA mismatch repair MutS family.|||This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. http://togogenome.org/gene/765911:THIVI_RS03260 ^@ http://purl.uniprot.org/uniprot/I3Y6V5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the TACO1 family.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS21755 ^@ http://purl.uniprot.org/uniprot/I3YH28 ^@ Similarity ^@ Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. http://togogenome.org/gene/765911:THIVI_RS14085 ^@ http://purl.uniprot.org/uniprot/I3YCT9 ^@ Function|||Similarity|||Subunit ^@ Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.|||Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.|||Monomer. http://togogenome.org/gene/765911:THIVI_RS03770 ^@ http://purl.uniprot.org/uniprot/U3GKY2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the FliS family.|||cytosol http://togogenome.org/gene/765911:THIVI_RS01985 ^@ http://purl.uniprot.org/uniprot/I3Y660 ^@ Function|||Similarity|||Subunit ^@ Belongs to the Hfq family.|||Homohexamer.|||RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. http://togogenome.org/gene/765911:THIVI_RS01725 ^@ http://purl.uniprot.org/uniprot/I3Y609 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Bacterial flagellum basal body|||Belongs to the FliF family.|||Membrane|||The M ring may be actively involved in energy transduction.|||The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod. The M ring is integral to the inner membrane of the cell and may be connected to the flagellar rod via the S ring. The S (supramembrane ring) lies just distal to the M ring. The L and P rings lie in the outer membrane and the periplasmic space, respectively. http://togogenome.org/gene/765911:THIVI_RS14735 ^@ http://purl.uniprot.org/uniprot/I3YD50 ^@ Function|||Similarity|||Subunit ^@ Belongs to the Mrp/NBP35 ATP-binding proteins family.|||Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP.|||Homodimer.|||In the C-terminal section; belongs to the Mrp/NBP35 ATP-binding proteins family.|||In the N-terminal section; belongs to the MIP18 family. http://togogenome.org/gene/765911:THIVI_RS05360 ^@ http://purl.uniprot.org/uniprot/I3Y814 ^@ Function|||Subunit ^@ Acetyl-CoA carboxylase is a heterohexamer of biotin carboxyl carrier protein, biotin carboxylase and the two subunits of carboxyl transferase in a 2:2 complex.|||This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. http://togogenome.org/gene/765911:THIVI_RS17700 ^@ http://purl.uniprot.org/uniprot/I3YET7 ^@ Similarity ^@ Belongs to the NifX/NifY family. http://togogenome.org/gene/765911:THIVI_RS12280 ^@ http://purl.uniprot.org/uniprot/I3YBV2 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PRA-CH family.|||Binds 1 Mg(2+) ion per subunit.|||Binds 1 zinc ion per subunit.|||Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS18905 ^@ http://purl.uniprot.org/uniprot/I3YFI0 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I subunit 3 family.|||Cell inner membrane|||Cell membrane|||NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/765911:THIVI_RS15095 ^@ http://purl.uniprot.org/uniprot/I3YDC5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS12615 ^@ http://purl.uniprot.org/uniprot/I3YC19 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the MnmG family.|||Cytoplasm|||Homodimer. Heterotetramer of two MnmE and two MnmG subunits.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34. http://togogenome.org/gene/765911:THIVI_RS13720 ^@ http://purl.uniprot.org/uniprot/I3YCM3 ^@ Caution ^@ Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS14950 ^@ http://purl.uniprot.org/uniprot/I3YD95 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the HesB/IscA family.|||Binds 1 iron-sulfur cluster per subunit.|||Homodimer.|||Required for insertion of 4Fe-4S clusters for at least IspG. http://togogenome.org/gene/765911:THIVI_RS12265 ^@ http://purl.uniprot.org/uniprot/I3YBU9 ^@ Activity Regulation|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the fluoride channel Fluc/FEX (TC 1.A.43) family.|||Cell inner membrane|||Fluoride-specific ion channel. Important for reducing fluoride concentration in the cell, thus reducing its toxicity.|||Membrane|||Na(+) is not transported, but it plays an essential structural role and its presence is essential for fluoride channel function. http://togogenome.org/gene/765911:THIVI_RS21985 ^@ http://purl.uniprot.org/uniprot/I3YH75 ^@ Similarity ^@ Belongs to the MEMO1 family. http://togogenome.org/gene/765911:THIVI_RS12465 ^@ http://purl.uniprot.org/uniprot/I3YBY7 ^@ Similarity ^@ Belongs to the thioredoxin family. http://togogenome.org/gene/765911:THIVI_RS15265 ^@ http://purl.uniprot.org/uniprot/I3YDF9 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Bacterial flagellum|||Belongs to the bacterial flagellin family.|||Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.|||Secreted http://togogenome.org/gene/765911:THIVI_RS17680 ^@ http://purl.uniprot.org/uniprot/I3YET3 ^@ Function|||Similarity|||Subunit ^@ Belongs to the NifD/NifK/NifE/NifN family.|||Tetramer of two alpha and two beta chains. Forms complex with the iron protein (nitrogenase component 2).|||This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation. http://togogenome.org/gene/765911:THIVI_RS05095 ^@ http://purl.uniprot.org/uniprot/I3Y7V7 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the CcoP / FixP family.|||Binds 2 heme C groups per subunit.|||C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.|||Cell inner membrane|||Component of the cbb3-type cytochrome c oxidase. http://togogenome.org/gene/765911:THIVI_RS05025 ^@ http://purl.uniprot.org/uniprot/I3Y7U3 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the SHMT family.|||Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.|||Cytoplasm|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS08730 ^@ http://purl.uniprot.org/uniprot/I3Y9V7 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the ferritin family. Prokaryotic subfamily.|||Cytoplasm|||Iron-storage protein. http://togogenome.org/gene/765911:THIVI_RS16105 ^@ http://purl.uniprot.org/uniprot/I3YDX8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the RNA polymerase subunit omega family.|||Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.|||The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription. http://togogenome.org/gene/765911:THIVI_RS19350 ^@ http://purl.uniprot.org/uniprot/I3YFS0 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the DksA family.|||Cytoplasm|||Interacts directly with the RNA polymerase.|||Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. http://togogenome.org/gene/765911:THIVI_RS20875 ^@ http://purl.uniprot.org/uniprot/I3YGL2 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the RNA methyltransferase TrmD family.|||Cytoplasm|||Homodimer.|||Specifically methylates guanosine-37 in various tRNAs. http://togogenome.org/gene/765911:THIVI_RS12530 ^@ http://purl.uniprot.org/uniprot/I3YC02 ^@ Similarity ^@ Belongs to the MoaD family. http://togogenome.org/gene/765911:THIVI_RS20250 ^@ http://purl.uniprot.org/uniprot/I3YG86 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL1 family.|||Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.|||Part of the 50S ribosomal subunit.|||Protein L1 is also a translational repressor protein, it controls the translation of the L11 operon by binding to its mRNA. http://togogenome.org/gene/765911:THIVI_RS17405 ^@ http://purl.uniprot.org/uniprot/I3YEN3 ^@ Caution|||Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the anthranilate phosphoribosyltransferase family.|||Binds 2 magnesium ions per monomer.|||Catalyzes the transfer of the phosphoribosyl group of 5-phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA).|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS00440 ^@ http://purl.uniprot.org/uniprot/I3Y5A6 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TatB family.|||Cell inner membrane|||Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.|||The Tat system comprises two distinct complexes: a TatABC complex, containing multiple copies of TatA, TatB and TatC subunits, and a separate TatA complex, containing only TatA subunits. Substrates initially bind to the TatABC complex, which probably triggers association of the separate TatA complex to form the active translocon. http://togogenome.org/gene/765911:THIVI_RS12285 ^@ http://purl.uniprot.org/uniprot/I3YBV3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the HisA/HisF family.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS07575 ^@ http://purl.uniprot.org/uniprot/I3Y988 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family.|||Binds 2 Zn(2+) ions per subunit.|||Monomer.|||Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl-glutathione to form glutathione and D-lactic acid. http://togogenome.org/gene/765911:THIVI_RS11240 ^@ http://purl.uniprot.org/uniprot/I3YBA3 ^@ Function|||Similarity ^@ Belongs to the transpeptidase family. FtsI subfamily.|||Catalyzes cross-linking of the peptidoglycan cell wall at the division septum. http://togogenome.org/gene/765911:THIVI_RS12270 ^@ http://purl.uniprot.org/uniprot/I3YBV0 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS14880 ^@ http://purl.uniprot.org/uniprot/I3YD81 ^@ Similarity ^@ Belongs to the SOS response-associated peptidase family. http://togogenome.org/gene/765911:THIVI_RS19945 ^@ http://purl.uniprot.org/uniprot/I3YG29 ^@ Similarity ^@ Belongs to the CFA/CMAS family. http://togogenome.org/gene/765911:THIVI_RS15635 ^@ http://purl.uniprot.org/uniprot/I3YDN4 ^@ Similarity|||Subunit ^@ Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS04760 ^@ http://purl.uniprot.org/uniprot/I3Y7P4 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the acetokinase family.|||Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction.|||Cytoplasm|||Homodimer.|||Mg(2+). Can also accept Mn(2+). http://togogenome.org/gene/765911:THIVI_RS19030 ^@ http://purl.uniprot.org/uniprot/I3YFK6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the NrfD family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS13345 ^@ http://purl.uniprot.org/uniprot/I3YCE6 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome.|||Belongs to the EF-Ts family.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS20080 ^@ http://purl.uniprot.org/uniprot/I3YG56 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the UbiA prenyltransferase family.|||Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.|||Cell inner membrane http://togogenome.org/gene/765911:THIVI_RS15080 ^@ http://purl.uniprot.org/uniprot/I3YDC2 ^@ Similarity ^@ Belongs to the HdrA family. http://togogenome.org/gene/765911:THIVI_RS21495 ^@ http://purl.uniprot.org/uniprot/I3YGY1 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the purine/pyrimidine phosphoribosyltransferase family.|||Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS10560 ^@ http://purl.uniprot.org/uniprot/I3YAW6 ^@ Similarity ^@ Belongs to the BolA/IbaG family. http://togogenome.org/gene/765911:THIVI_RS08670 ^@ http://purl.uniprot.org/uniprot/I3Y9U4 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the CpoB family.|||Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division.|||Periplasm http://togogenome.org/gene/765911:THIVI_RS10050 ^@ http://purl.uniprot.org/uniprot/I3YAL9 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the urease beta subunit family.|||Cytoplasm|||Heterotrimer of UreA (gamma), UreB (beta) and UreC (alpha) subunits. Three heterotrimers associate to form the active enzyme. http://togogenome.org/gene/765911:THIVI_RS01160 ^@ http://purl.uniprot.org/uniprot/I3Y5P0 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the CoaE family.|||Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS10850 ^@ http://purl.uniprot.org/uniprot/I3YB25 ^@ Similarity ^@ Belongs to the MipA/OmpV family. http://togogenome.org/gene/765911:THIVI_RS17885 ^@ http://purl.uniprot.org/uniprot/I3YEX2 ^@ Caution ^@ Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS05020 ^@ http://purl.uniprot.org/uniprot/I3Y7U2 ^@ Function|||Similarity ^@ Belongs to the methyltransferase superfamily. UbiG/COQ3 family.|||O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway. http://togogenome.org/gene/765911:THIVI_RS22575 ^@ http://purl.uniprot.org/uniprot/I3Y8K9 ^@ Caution|||Subcellular Location Annotation ^@ Cell inner membrane|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS13175 ^@ http://purl.uniprot.org/uniprot/I3YCB2 ^@ Function|||Similarity ^@ Belongs to the RecR family.|||May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. http://togogenome.org/gene/765911:THIVI_RS07580 ^@ http://purl.uniprot.org/uniprot/I3Y989 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the transketolase family. DXPS subfamily.|||Binds 1 Mg(2+) ion per subunit.|||Binds 1 thiamine pyrophosphate per subunit.|||Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP).|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS04210 ^@ http://purl.uniprot.org/uniprot/I3Y7C9 ^@ Cofactor|||Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the Rieske iron-sulfur protein family.|||Binds 1 [2Fe-2S] cluster per subunit.|||Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.|||Membrane|||The Rieske protein is a high potential 2Fe-2S protein.|||The main subunits of complex b-c1 are: cytochrome b, cytochrome c1 and the Rieske protein. http://togogenome.org/gene/765911:THIVI_RS14065 ^@ http://purl.uniprot.org/uniprot/I3YCT5 ^@ Caution|||Function|||Similarity ^@ Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.|||Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/765911:THIVI_RS10730 ^@ http://purl.uniprot.org/uniprot/I3YB01 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS15230 ^@ http://purl.uniprot.org/uniprot/I3YDF2 ^@ Similarity ^@ Belongs to the transferase hexapeptide repeat family. http://togogenome.org/gene/765911:THIVI_RS13160 ^@ http://purl.uniprot.org/uniprot/I3YCA9 ^@ Function|||Similarity|||Subunit ^@ ATPase required for the correct placement of the division site. Cell division inhibitors MinC and MinD act in concert to form an inhibitor capable of blocking formation of the polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings.|||Belongs to the ParA family. MinD subfamily.|||Interacts with MinC and FtsZ. http://togogenome.org/gene/765911:THIVI_RS02360 ^@ http://purl.uniprot.org/uniprot/I3Y6D1 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. http://togogenome.org/gene/765911:THIVI_RS22910 ^@ http://purl.uniprot.org/uniprot/I3YDN1 ^@ Function|||Similarity ^@ Belongs to the PINc/VapC protein family.|||Toxic component of a toxin-antitoxin (TA) system. An RNase. http://togogenome.org/gene/765911:THIVI_RS03595 ^@ http://purl.uniprot.org/uniprot/I3Y722 ^@ Function|||Similarity ^@ Acts on leucine, isoleucine and valine.|||Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. http://togogenome.org/gene/765911:THIVI_RS00420 ^@ http://purl.uniprot.org/uniprot/I3Y5A2 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the KdpA family.|||Cell inner membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds the periplasmic potassium ions and delivers the ions to the membrane domain of KdpB through an intramembrane tunnel.|||The system is composed of three essential subunits: KdpA, KdpB and KdpC. http://togogenome.org/gene/765911:THIVI_RS03760 ^@ http://purl.uniprot.org/uniprot/I3Y752 ^@ Similarity ^@ Belongs to the BolA/IbaG family. http://togogenome.org/gene/765911:THIVI_RS22150 ^@ http://purl.uniprot.org/uniprot/I3YHA7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the TamA family.|||Cell outer membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS01280 ^@ http://purl.uniprot.org/uniprot/I3Y5R5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the PEP-utilizing enzyme family.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS18965 ^@ http://purl.uniprot.org/uniprot/I3YFJ2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the complex I subunit 4 family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS09160 ^@ http://purl.uniprot.org/uniprot/I3YA42 ^@ Function|||Similarity ^@ Belongs to the aconitase/IPM isomerase family.|||Catalyzes the isomerization of citrate to isocitrate via cis-aconitate. http://togogenome.org/gene/765911:THIVI_RS07080 ^@ http://purl.uniprot.org/uniprot/I3Y900 ^@ Function|||Similarity ^@ Belongs to the flavodoxin family.|||Low-potential electron donor to a number of redox enzymes. http://togogenome.org/gene/765911:THIVI_RS10035 ^@ http://purl.uniprot.org/uniprot/I3YAL6 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the UreF family.|||Cytoplasm|||Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.|||UreD, UreF and UreG form a complex that acts as a GTP-hydrolysis-dependent molecular chaperone, activating the urease apoprotein by helping to assemble the nickel containing metallocenter of UreC. The UreE protein probably delivers the nickel. http://togogenome.org/gene/765911:THIVI_RS13250 ^@ http://purl.uniprot.org/uniprot/I3YCC7 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-II aminoacyl-tRNA synthetase family.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS00615 ^@ http://purl.uniprot.org/uniprot/I3Y5D2 ^@ Function|||Similarity ^@ Belongs to the PemK/MazF family.|||Toxic component of a type II toxin-antitoxin (TA) system. http://togogenome.org/gene/765911:THIVI_RS03255 ^@ http://purl.uniprot.org/uniprot/I3Y6V4 ^@ Function|||Similarity|||Subunit ^@ Belongs to the helicase family. UvrD subfamily.|||Homodimer.|||Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction. http://togogenome.org/gene/765911:THIVI_RS00465 ^@ http://purl.uniprot.org/uniprot/I3Y5B1 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the QueC family.|||Binds 1 zinc ion per subunit.|||Catalyzes the ATP-dependent conversion of 7-carboxy-7-deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). http://togogenome.org/gene/765911:THIVI_RS00495 ^@ http://purl.uniprot.org/uniprot/I3Y5B6 ^@ Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the pantothenate synthetase family.|||Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate.|||Cytoplasm|||Homodimer.|||The reaction proceeds by a bi uni uni bi ping pong mechanism. http://togogenome.org/gene/765911:THIVI_RS12105 ^@ http://purl.uniprot.org/uniprot/I3YBR7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the GcdB/MmdB/OadB family.|||Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation.|||Cell membrane|||Heterotrimer of an alpha, a beta and a gamma subunit.|||Membrane http://togogenome.org/gene/765911:THIVI_RS06910 ^@ http://purl.uniprot.org/uniprot/I3Y8W6 ^@ Function|||Similarity ^@ Belongs to the PINc/VapC protein family.|||Toxic component of a toxin-antitoxin (TA) system. An RNase. http://togogenome.org/gene/765911:THIVI_RS16895 ^@ http://purl.uniprot.org/uniprot/I3YED3 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS16405 ^@ http://purl.uniprot.org/uniprot/I3YE35 ^@ Similarity ^@ Belongs to the UbiH/COQ6 family. http://togogenome.org/gene/765911:THIVI_RS11190 ^@ http://purl.uniprot.org/uniprot/I3YB93 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the FtsA/MreB family.|||Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring.|||Cell inner membrane|||Self-interacts. Interacts with FtsZ. http://togogenome.org/gene/765911:THIVI_RS04090 ^@ http://purl.uniprot.org/uniprot/I3Y7A6 ^@ Similarity ^@ Belongs to the thioredoxin family. http://togogenome.org/gene/765911:THIVI_RS19040 ^@ http://purl.uniprot.org/uniprot/I3YFK8 ^@ Similarity ^@ Belongs to the peptidase A31 family. http://togogenome.org/gene/765911:THIVI_RS22050 ^@ http://purl.uniprot.org/uniprot/I3YH87 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.|||Cell membrane|||Heterotetramer composed of ParC and ParE.|||Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule. http://togogenome.org/gene/765911:THIVI_RS13805 ^@ http://purl.uniprot.org/uniprot/I3YCP0 ^@ Similarity ^@ Belongs to the helicase family. UvrD subfamily. http://togogenome.org/gene/765911:THIVI_RS21105 ^@ http://purl.uniprot.org/uniprot/I3YGQ7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the CDP-alcohol phosphatidyltransferase class-I family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS05165 ^@ http://purl.uniprot.org/uniprot/I3Y7X1 ^@ Similarity ^@ Belongs to the complex I 49 kDa subunit family. http://togogenome.org/gene/765911:THIVI_RS12540 ^@ http://purl.uniprot.org/uniprot/I3YC04 ^@ Function|||Similarity ^@ Belongs to the MoaB/Mog family.|||May be involved in the biosynthesis of molybdopterin. http://togogenome.org/gene/765911:THIVI_RS11370 ^@ http://purl.uniprot.org/uniprot/I3YBC8 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the AdoMet synthase family.|||Binds 1 potassium ion per subunit.|||Binds 2 divalent ions per subunit.|||Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.|||Cytoplasm|||Homotetramer; dimer of dimers. http://togogenome.org/gene/765911:THIVI_RS16365 ^@ http://purl.uniprot.org/uniprot/I3YE27 ^@ Similarity ^@ Belongs to the phosphohexose mutase family. http://togogenome.org/gene/765911:THIVI_RS20335 ^@ http://purl.uniprot.org/uniprot/I3YGA3 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL16 family.|||Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs.|||Part of the 50S ribosomal subunit. http://togogenome.org/gene/765911:THIVI_RS01305 ^@ http://purl.uniprot.org/uniprot/I3Y5S0 ^@ Similarity ^@ Belongs to the glycosyl hydrolase 1 family. http://togogenome.org/gene/765911:THIVI_RS22525 ^@ http://purl.uniprot.org/uniprot/I3Y7E9 ^@ Similarity ^@ Belongs to the glycosyltransferase 41 family. O-GlcNAc transferase subfamily. http://togogenome.org/gene/765911:THIVI_RS20130 ^@ http://purl.uniprot.org/uniprot/I3YG67 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS02200 ^@ http://purl.uniprot.org/uniprot/I3Y6A0 ^@ Similarity ^@ In the N-terminal section; belongs to the CRISPR-associated nuclease Cas3-HD family.|||In the central section; belongs to the CRISPR-associated helicase Cas3 family. http://togogenome.org/gene/765911:THIVI_RS09300 ^@ http://purl.uniprot.org/uniprot/I3YA62 ^@ Similarity ^@ Belongs to the peptidase S13 family. http://togogenome.org/gene/765911:THIVI_RS16460 ^@ http://purl.uniprot.org/uniprot/I3YE47 ^@ Caution|||Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.|||Binds 3 [4Fe-4S] clusters.|||Cell inner membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.|||The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG. http://togogenome.org/gene/765911:THIVI_RS14385 ^@ http://purl.uniprot.org/uniprot/I3YCY5 ^@ Subcellular Location Annotation ^@ Cell membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS15640 ^@ http://purl.uniprot.org/uniprot/I3YDN5 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the histidinol dehydrogenase family.|||Binds 1 zinc ion per subunit.|||Catalyzes the sequential NAD-dependent oxidations of L-histidinol to L-histidinaldehyde and then to L-histidine. http://togogenome.org/gene/765911:THIVI_RS04295 ^@ http://purl.uniprot.org/uniprot/I3Y7E8 ^@ Similarity ^@ Belongs to the glycosyltransferase 41 family. O-GlcNAc transferase subfamily. http://togogenome.org/gene/765911:THIVI_RS19915 ^@ http://purl.uniprot.org/uniprot/I3YG23 ^@ Function|||Similarity ^@ Belongs to the CheD family.|||Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis. http://togogenome.org/gene/765911:THIVI_RS13670 ^@ http://purl.uniprot.org/uniprot/I3YCL3 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS13525 ^@ http://purl.uniprot.org/uniprot/I3YCI2 ^@ Similarity ^@ Belongs to the polysaccharide synthase family. http://togogenome.org/gene/765911:THIVI_RS12340 ^@ http://purl.uniprot.org/uniprot/I3YBW5 ^@ Function|||Similarity|||Subunit ^@ Belongs to the bacterial ribosomal protein bL21 family.|||Part of the 50S ribosomal subunit. Contacts protein L20.|||This protein binds to 23S rRNA in the presence of protein L20. http://togogenome.org/gene/765911:THIVI_RS03050 ^@ http://purl.uniprot.org/uniprot/I3Y6R4 ^@ Cofactor|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the anaerobic coproporphyrinogen-III oxidase family.|||Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.|||Cytoplasm|||Monomer. http://togogenome.org/gene/765911:THIVI_RS05575 ^@ http://purl.uniprot.org/uniprot/I3Y856 ^@ Similarity ^@ Belongs to the UPF0045 family. http://togogenome.org/gene/765911:THIVI_RS11185 ^@ http://purl.uniprot.org/uniprot/I3YB92 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the FtsZ family.|||Cytoplasm|||Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.|||Homodimer. Polymerizes to form a dynamic ring structure in a strictly GTP-dependent manner. Interacts directly with several other division proteins. http://togogenome.org/gene/765911:THIVI_RS10780 ^@ http://purl.uniprot.org/uniprot/I3YB10 ^@ Similarity ^@ Belongs to the SIS family. GutQ/KpsF subfamily. http://togogenome.org/gene/765911:THIVI_RS05050 ^@ http://purl.uniprot.org/uniprot/I3Y7U8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the DMRL synthase family.|||Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.|||Forms an icosahedral capsid composed of 60 subunits, arranged as a dodecamer of pentamers. http://togogenome.org/gene/765911:THIVI_RS13200 ^@ http://purl.uniprot.org/uniprot/I3YCB7 ^@ Caution|||Function|||Similarity ^@ Belongs to the dUTPase family.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA. http://togogenome.org/gene/765911:THIVI_RS22030 ^@ http://purl.uniprot.org/uniprot/I3YH83 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the PsiE family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS03270 ^@ http://purl.uniprot.org/uniprot/I3Y6V7 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the RuvC family.|||Binds 2 Mg(2+) ion per subunit.|||Cytoplasm|||Homodimer which binds Holliday junction (HJ) DNA. The HJ becomes 2-fold symmetrical on binding to RuvC with unstacked arms; it has a different conformation from HJ DNA in complex with RuvA. In the full resolvosome a probable DNA-RuvA(4)-RuvB(12)-RuvC(2) complex forms which resolves the HJ.|||The RuvA-RuvB-RuvC complex processes Holliday junction (HJ) DNA during genetic recombination and DNA repair. Endonuclease that resolves HJ intermediates. Cleaves cruciform DNA by making single-stranded nicks across the HJ at symmetrical positions within the homologous arms, yielding a 5'-phosphate and a 3'-hydroxyl group; requires a central core of homology in the junction. The consensus cleavage sequence is 5'-(A/T)TT(C/G)-3'. Cleavage occurs on the 3'-side of the TT dinucleotide at the point of strand exchange. HJ branch migration catalyzed by RuvA-RuvB allows RuvC to scan DNA until it finds its consensus sequence, where it cleaves and resolves the cruciform DNA. http://togogenome.org/gene/765911:THIVI_RS08445 ^@ http://purl.uniprot.org/uniprot/I3Y9Q1 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS05465 ^@ http://purl.uniprot.org/uniprot/I3Y834 ^@ Domain|||Function|||Subcellular Location Annotation ^@ Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation.|||Periplasm|||The PPIase activity resides only in the second parvulin domain. The N-terminal region and the C-terminal tail are necessary and sufficient for the chaperone activity of SurA. The PPIase activity is dispensable for SurA to function as a chaperone. The N-terminal region and the C-terminal tail are also required for porin recognition. http://togogenome.org/gene/765911:THIVI_RS00500 ^@ http://purl.uniprot.org/uniprot/I3Y5B7 ^@ Cofactor|||Function|||PTM|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PanD family.|||Binds 1 pyruvoyl group covalently per subunit.|||Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.|||Cytoplasm|||Heterooctamer of four alpha and four beta subunits.|||Is synthesized initially as an inactive proenzyme, which is activated by self-cleavage at a specific serine bond to produce a beta-subunit with a hydroxyl group at its C-terminus and an alpha-subunit with a pyruvoyl group at its N-terminus. http://togogenome.org/gene/765911:THIVI_RS15015 ^@ http://purl.uniprot.org/uniprot/I3YDA8 ^@ Similarity ^@ Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. http://togogenome.org/gene/765911:THIVI_RS16050 ^@ http://purl.uniprot.org/uniprot/I3YDW7 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the YqgF HJR family.|||Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS05140 ^@ http://purl.uniprot.org/uniprot/I3Y7W6 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS08930 ^@ http://purl.uniprot.org/uniprot/I3Y9Z8 ^@ Function|||Similarity ^@ Belongs to the Mg-chelatase subunits D/I family.|||Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. http://togogenome.org/gene/765911:THIVI_RS05035 ^@ http://purl.uniprot.org/uniprot/I3Y7U5 ^@ Cofactor|||Function|||Similarity ^@ Binds 1 zinc ion.|||Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'-phosphate.|||In the C-terminal section; belongs to the HTP reductase family.|||In the N-terminal section; belongs to the cytidine and deoxycytidylate deaminase family. http://togogenome.org/gene/765911:THIVI_RS03960 ^@ http://purl.uniprot.org/uniprot/I3Y784 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the universal stress protein A family.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS20350 ^@ http://purl.uniprot.org/uniprot/I3YGA6 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL14 family.|||Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome.|||Part of the 50S ribosomal subunit. Forms a cluster with proteins L3 and L19. In the 70S ribosome, L14 and L19 interact and together make contacts with the 16S rRNA in bridges B5 and B8. http://togogenome.org/gene/765911:THIVI_RS15930 ^@ http://purl.uniprot.org/uniprot/I3YDU2 ^@ Similarity ^@ Belongs to the SufE family. http://togogenome.org/gene/765911:THIVI_RS00345 ^@ http://purl.uniprot.org/uniprot/I3Y587 ^@ Similarity ^@ Belongs to the UPF0125 (RnfH) family. http://togogenome.org/gene/765911:THIVI_RS20420 ^@ http://purl.uniprot.org/uniprot/I3YGC1 ^@ Domain|||Function|||Similarity|||Subunit ^@ Belongs to the RNA polymerase alpha chain family.|||DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.|||Homodimer. The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.|||The N-terminal domain is essential for RNAP assembly and basal transcription, whereas the C-terminal domain is involved in interaction with transcriptional regulators and with upstream promoter elements. http://togogenome.org/gene/765911:THIVI_RS03940 ^@ http://purl.uniprot.org/uniprot/I3Y780 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the IspG family.|||Binds 1 [4Fe-4S] cluster.|||Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. http://togogenome.org/gene/765911:THIVI_RS16215 ^@ http://purl.uniprot.org/uniprot/I3YDZ7 ^@ Function|||Similarity ^@ Belongs to the ribF family.|||Catalyzes the phosphorylation of riboflavin to FMN followed by the adenylation of FMN to FAD. http://togogenome.org/gene/765911:THIVI_RS18185 ^@ http://purl.uniprot.org/uniprot/I3YF35 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the HupC/HyaC/HydC family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS06690 ^@ http://purl.uniprot.org/uniprot/I3Y8R8 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS12345 ^@ http://purl.uniprot.org/uniprot/I3YBW6 ^@ Similarity ^@ Belongs to the FPP/GGPP synthase family. http://togogenome.org/gene/765911:THIVI_RS19280 ^@ http://purl.uniprot.org/uniprot/I3YFQ6 ^@ Similarity ^@ Belongs to the V-ATPase D subunit family. http://togogenome.org/gene/765911:THIVI_RS18890 ^@ http://purl.uniprot.org/uniprot/I3YFH8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the triosephosphate isomerase family.|||Cytoplasm|||Homodimer.|||Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P). http://togogenome.org/gene/765911:THIVI_RS20395 ^@ http://purl.uniprot.org/uniprot/I3YGB5 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL15 family.|||Binds to the 23S rRNA.|||Part of the 50S ribosomal subunit. http://togogenome.org/gene/765911:THIVI_RS05330 ^@ http://purl.uniprot.org/uniprot/I3Y808 ^@ Similarity ^@ Belongs to the CutA family. http://togogenome.org/gene/765911:THIVI_RS01275 ^@ http://purl.uniprot.org/uniprot/I3Y5R4 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS17300 ^@ http://purl.uniprot.org/uniprot/I3YEL5 ^@ Function|||Similarity|||Subunit ^@ Belongs to the class I-like SAM-binding methyltransferase superfamily. CmoB family.|||Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L-methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5-carboxymethoxyuridine (cmo5U) at position 34 in tRNAs.|||Homotetramer. http://togogenome.org/gene/765911:THIVI_RS17210 ^@ http://purl.uniprot.org/uniprot/G4DT07 ^@ Similarity ^@ Belongs to the transposase 11 family. http://togogenome.org/gene/765911:THIVI_RS08685 ^@ http://purl.uniprot.org/uniprot/I3Y9U6 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TolB family.|||Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.|||Periplasm|||The Tol-Pal system is composed of five core proteins: the inner membrane proteins TolA, TolQ and TolR, the periplasmic protein TolB and the outer membrane protein Pal. They form a network linking the inner and outer membranes and the peptidoglycan layer. http://togogenome.org/gene/765911:THIVI_RS09585 ^@ http://purl.uniprot.org/uniprot/I3YAC3 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.|||Belongs to the antenna complex beta subunit family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS15735 ^@ http://purl.uniprot.org/uniprot/I3YDQ2 ^@ Similarity ^@ Belongs to the metallophosphoesterase superfamily. YfcE family. http://togogenome.org/gene/765911:THIVI_RS20060 ^@ http://purl.uniprot.org/uniprot/I3YG52 ^@ Similarity ^@ Belongs to the RutC family. http://togogenome.org/gene/765911:THIVI_RS02970 ^@ http://purl.uniprot.org/uniprot/I3Y6P8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.|||Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family.|||Cell inner membrane|||Cytoplasm|||Monomer. http://togogenome.org/gene/765911:THIVI_RS06600 ^@ http://purl.uniprot.org/uniprot/I3Y8Q0 ^@ Function|||Similarity ^@ Belongs to the pyruvate, phosphate/water dikinase regulatory protein family. PSRP subfamily.|||Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation. http://togogenome.org/gene/765911:THIVI_RS22060 ^@ http://purl.uniprot.org/uniprot/I3YH89 ^@ Caution|||Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the QueG family.|||Binds 2 [4Fe-4S] clusters per monomer.|||Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer. http://togogenome.org/gene/765911:THIVI_RS10150 ^@ http://purl.uniprot.org/uniprot/I3YAN8 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the glycosyltransferase group 1 family.|||Cell membrane|||Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP-Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A. http://togogenome.org/gene/765911:THIVI_RS12590 ^@ http://purl.uniprot.org/uniprot/I3YC14 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ATPase A chain family.|||Cell inner membrane|||Cell membrane|||F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has four main subunits: a, b, b' and c.|||F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a(1), b(2) and c(9-12). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. CF(1) is attached to CF(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.|||Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.|||Membrane http://togogenome.org/gene/765911:THIVI_RS17835 ^@ http://purl.uniprot.org/uniprot/I3YEW2 ^@ Similarity ^@ Belongs to the asparagine synthetase family. http://togogenome.org/gene/765911:THIVI_RS01690 ^@ http://purl.uniprot.org/uniprot/I3Y602 ^@ Similarity ^@ Belongs to the MotB family. http://togogenome.org/gene/765911:THIVI_RS12690 ^@ http://purl.uniprot.org/uniprot/I3YC34 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the UvrB family.|||Cytoplasm|||Forms a heterotetramer with UvrA during the search for lesions. Interacts with UvrC in an incision complex.|||The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage.|||The beta-hairpin motif is involved in DNA binding. http://togogenome.org/gene/765911:THIVI_RS11200 ^@ http://purl.uniprot.org/uniprot/I3YB95 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the D-alanine--D-alanine ligase family.|||Binds 2 magnesium or manganese ions per subunit.|||Cell wall formation.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS16135 ^@ http://purl.uniprot.org/uniprot/I3YDY4 ^@ Function|||Similarity ^@ Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.|||Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis. http://togogenome.org/gene/765911:THIVI_RS12200 ^@ http://purl.uniprot.org/uniprot/I3YBT6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ABC-3 integral membrane protein family.|||Cell membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS17675 ^@ http://purl.uniprot.org/uniprot/I3YET2 ^@ Cofactor|||Function|||PTM|||Similarity|||Subunit ^@ Belongs to the NifH/BchL/ChlL family.|||Binds 1 [4Fe-4S] cluster per dimer.|||Homodimer.|||The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein.|||The reversible ADP-ribosylation of Arg inactivates the nitrogenase reductase and regulates nitrogenase activity.|||The reversible ADP-ribosylation of Arg-101 inactivates the nitrogenase reductase and regulates nitrogenase activity. http://togogenome.org/gene/765911:THIVI_RS02245 ^@ http://purl.uniprot.org/uniprot/I3Y6A8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the CRISPR-associated endonuclease Cas1 family.|||CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.|||Homodimer, forms a heterotetramer with a Cas2 homodimer. http://togogenome.org/gene/765911:THIVI_RS01760 ^@ http://purl.uniprot.org/uniprot/I3Y616 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Bacterial flagellum basal body|||Belongs to the FliM family.|||Cell inner membrane|||FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.|||Membrane http://togogenome.org/gene/765911:THIVI_RS18230 ^@ http://purl.uniprot.org/uniprot/I3YF43 ^@ Similarity ^@ Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. http://togogenome.org/gene/765911:THIVI_RS12230 ^@ http://purl.uniprot.org/uniprot/I3YBU2 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.|||Cell inner membrane|||Cell membrane|||Membrane|||Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane. http://togogenome.org/gene/765911:THIVI_RS04745 ^@ http://purl.uniprot.org/uniprot/I3Y7P1 ^@ Function|||Similarity ^@ Allosteric enzyme that catalyzes the rate-limiting step in glycogen catabolism, the phosphorolytic cleavage of glycogen to produce glucose-1-phosphate, and plays a central role in maintaining cellular and organismal glucose homeostasis.|||Belongs to the glycogen phosphorylase family.|||Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. http://togogenome.org/gene/765911:THIVI_RS20700 ^@ http://purl.uniprot.org/uniprot/I3YGH8 ^@ Similarity ^@ Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. http://togogenome.org/gene/765911:THIVI_RS05515 ^@ http://purl.uniprot.org/uniprot/I3Y844 ^@ Similarity ^@ Belongs to the peptidase A31 family. http://togogenome.org/gene/765911:THIVI_RS10405 ^@ http://purl.uniprot.org/uniprot/I3YAT5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the autoinducer-2 exporter (AI-2E) (TC 2.A.86) family.|||Membrane http://togogenome.org/gene/765911:THIVI_RS06315 ^@ http://purl.uniprot.org/uniprot/I3Y8K1 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.|||Cell membrane|||Heterodimer of a large and a small subunit. http://togogenome.org/gene/765911:THIVI_RS22330 ^@ http://purl.uniprot.org/uniprot/I3YHE6 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the Maf family. YceF subfamily.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Nucleoside triphosphate pyrophosphatase that hydrolyzes 7-methyl-GTP (m(7)GTP). May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. http://togogenome.org/gene/765911:THIVI_RS10080 ^@ http://purl.uniprot.org/uniprot/I3YAM5 ^@ Subcellular Location Annotation ^@ Cell inner membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS17960 ^@ http://purl.uniprot.org/uniprot/I3YEY8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.|||Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose.|||Homodimer. http://togogenome.org/gene/765911:THIVI_RS00040 ^@ http://purl.uniprot.org/uniprot/I3Y528 ^@ Similarity ^@ Belongs to the homoserine dehydrogenase family. http://togogenome.org/gene/765911:THIVI_RS02340 ^@ http://purl.uniprot.org/uniprot/I3Y6C7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the sigma-70 factor family. RpoS subfamily.|||Cytoplasm|||Interacts with the RNA polymerase core enzyme.|||Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response. http://togogenome.org/gene/765911:THIVI_RS05660 ^@ http://purl.uniprot.org/uniprot/I3Y873 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the TonB family.|||Cell inner membrane|||Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. http://togogenome.org/gene/765911:THIVI_RS12235 ^@ http://purl.uniprot.org/uniprot/I3YBU3 ^@ Similarity ^@ Belongs to the bacterial solute-binding protein ModA family. http://togogenome.org/gene/765911:THIVI_RS15530 ^@ http://purl.uniprot.org/uniprot/I3YDL1 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the type IA topoisomerase family.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer.|||Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone. http://togogenome.org/gene/765911:THIVI_RS00275 ^@ http://purl.uniprot.org/uniprot/I3Y575 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/765911:THIVI_RS22140 ^@ http://purl.uniprot.org/uniprot/I3YHA5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the bacterial glucokinase family.|||Cytoplasm http://togogenome.org/gene/765911:THIVI_RS01250 ^@ http://purl.uniprot.org/uniprot/I3Y5Q9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the cytochrome ubiquinol oxidase subunit 1 family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/765911:THIVI_RS03075 ^@ http://purl.uniprot.org/uniprot/I3Y6R9 ^@ Similarity ^@ Belongs to the bacterial histone-like protein family. http://togogenome.org/gene/765911:THIVI_RS02100 ^@ http://purl.uniprot.org/uniprot/I3Y686 ^@ Cofactor|||Similarity ^@ Belongs to the RtcB family.|||Binds 2 manganese ions per subunit. http://togogenome.org/gene/765911:THIVI_RS05480 ^@ http://purl.uniprot.org/uniprot/I3Y837 ^@ Cofactor|||Similarity ^@ Belongs to the complex I 24 kDa subunit family.|||Binds 1 [2Fe-2S] cluster. http://togogenome.org/gene/765911:THIVI_RS16530 ^@ http://purl.uniprot.org/uniprot/I3YE62 ^@ Similarity ^@ Belongs to the peptidase S24 family. http://togogenome.org/gene/765911:THIVI_RS16820 ^@ http://purl.uniprot.org/uniprot/I3YEB9 ^@ Similarity ^@ Belongs to the P(II) protein family. http://togogenome.org/gene/765911:THIVI_RS02050 ^@ http://purl.uniprot.org/uniprot/G4DT07 ^@ Similarity ^@ Belongs to the transposase 11 family. http://togogenome.org/gene/765911:THIVI_RS01445 ^@ http://purl.uniprot.org/uniprot/I3Y5V2 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bS1 family.