http://togogenome.org/gene/2604047:PDMSB3_RS00675 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z9S8 ^@ Activity Regulation|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ A double ring-shaped homohexamer of HslV is capped on each side by a ring-shaped HslU homohexamer. The assembly of the HslU/HslV complex is dependent on binding of ATP.|||Allosterically activated by HslU binding.|||Belongs to the peptidase T1B family. HslV subfamily.|||Cytoplasm|||Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. http://togogenome.org/gene/2604047:PDMSB3_RS08715 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z204 ^@ Similarity ^@ Belongs to the PhoH family. http://togogenome.org/gene/2604047:PDMSB3_RS30760 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDQ0 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS10500 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVG6 ^@ Subcellular Location Annotation ^@ Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS32295 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZRL1 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS18125 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZD43 ^@ Function|||Similarity ^@ Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.|||Specifically catalyzes the dephosphorylation of 2-phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. http://togogenome.org/gene/2604047:PDMSB3_RS33085 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEK1 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS27165 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKK8 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS19495 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZG59 ^@ Function|||Similarity ^@ Belongs to the FlgM family.|||Responsible for the coupling of flagellin expression to flagellar assembly by preventing expression of the flagellin genes when a component of the middle class of proteins is defective. It negatively regulates flagellar genes by inhibiting the activity of FliA by directly binding to FliA. http://togogenome.org/gene/2604047:PDMSB3_RS00210 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z730 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS19970 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2P4 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS33170 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZP12 ^@ Similarity ^@ Belongs to the UPF0276 family. http://togogenome.org/gene/2604047:PDMSB3_RS26780 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z389 ^@ Similarity ^@ Belongs to the GcvT family. http://togogenome.org/gene/2604047:PDMSB3_RS02960 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZD25 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. http://togogenome.org/gene/2604047:PDMSB3_RS15450 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZC61 ^@ Similarity ^@ Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. http://togogenome.org/gene/2604047:PDMSB3_RS16850 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YW80 ^@ Function|||Similarity ^@ Belongs to the esterase D family.|||Serine hydrolase involved in the detoxification of formaldehyde. http://togogenome.org/gene/2604047:PDMSB3_RS18855 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPY5 ^@ Function|||PTM|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL3 family.|||Methylated by PrmB.|||One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.|||Part of the 50S ribosomal subunit. Forms a cluster with proteins L14 and L19. http://togogenome.org/gene/2604047:PDMSB3_RS26115 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZC12 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the peptidase M15D family.|||Binds 1 zinc ion per subunit.|||Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide. http://togogenome.org/gene/2604047:PDMSB3_RS02825 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIJ0 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the MscS (TC 1.A.23) family.|||Cell inner membrane|||Homoheptamer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Mechanosensitive channel that participates in the regulation of osmotic pressure changes within the cell, opening in response to stretch forces in the membrane lipid bilayer, without the need for other proteins. Contributes to normal resistance to hypoosmotic shock. Forms an ion channel of 1.0 nanosiemens conductance with a slight preference for anions.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS09340 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZD62 ^@ Similarity ^@ Belongs to the bacterial histone-like protein family. http://togogenome.org/gene/2604047:PDMSB3_RS23865 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGC6 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS14320 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z7G9 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS16055 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCD4 ^@ Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation ^@ Bacitracin is thought to be involved in the inhibition of peptidoglycan synthesis by sequestering undecaprenyl diphosphate, thereby reducing the pool of lipid carrier available.|||Belongs to the UppP family.|||Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS21620 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJC8 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the CoA-transferase III family. Frc subfamily.|||Homodimer.|||Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS21160 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2W7 ^@ Similarity ^@ Belongs to the aminoglycoside phosphotransferase family.|||Belongs to the glycosyl hydrolase 13 family. TreS subfamily. http://togogenome.org/gene/2604047:PDMSB3_RS20830 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZHQ7 ^@ Similarity ^@ In the C-terminal section; belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. http://togogenome.org/gene/2604047:PDMSB3_RS02100 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAA3 ^@ Similarity ^@ Belongs to the PrpD family. http://togogenome.org/gene/2604047:PDMSB3_RS06025 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBS7 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS15 family.|||Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.|||One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.|||Part of the 30S ribosomal subunit. Forms a bridge to the 50S subunit in the 70S ribosome, contacting the 23S rRNA. http://togogenome.org/gene/2604047:PDMSB3_RS26380 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVX7 ^@ Similarity ^@ Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS14205 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZF63 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.|||Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner.|||Cytoplasm|||Monomer.|||The C-terminal coiled-coil domain is crucial for aminoacylation activity.|||ValRS has two distinct active sites: one for aminoacylation and one for editing. The misactivated threonine is translocated from the active site to the editing site. http://togogenome.org/gene/2604047:PDMSB3_RS25880 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZP72 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS23045 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YX87 ^@ Function|||Miscellaneous|||Similarity|||Subunit ^@ Belongs to the RuBisCO small chain family.|||Heterohexadecamer of 8 large and 8 small subunits.|||RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. Although the small subunit is not catalytic it is essential for maximal activity.|||The basic functional RuBisCO is composed of a large chain homodimer in a 'head-to-tail' conformation. In form I RuBisCO this homodimer is arranged in a barrel-like tetramer with the small subunits forming a tetrameric 'cap' on each end of the 'barrel'. http://togogenome.org/gene/2604047:PDMSB3_RS18390 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUI1 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TatB family.|||Cell membrane|||Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.|||The Tat system comprises two distinct complexes: a TatABC complex, containing multiple copies of TatA, TatB and TatC subunits, and a separate TatA complex, containing only TatA subunits. Substrates initially bind to the TatABC complex, which probably triggers association of the separate TatA complex to form the active translocon. http://togogenome.org/gene/2604047:PDMSB3_RS21130 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZM54 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS09585 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z6L7 ^@ Similarity ^@ Belongs to the low molecular weight phosphotyrosine protein phosphatase family. http://togogenome.org/gene/2604047:PDMSB3_RS00470 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZC65 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS12095 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVN3 ^@ Similarity ^@ Belongs to the malate synthase family. http://togogenome.org/gene/2604047:PDMSB3_RS02820 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z5S7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the DedA family.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS21140 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZRL2 ^@ Similarity ^@ Belongs to the disproportionating enzyme family. http://togogenome.org/gene/2604047:PDMSB3_RS29895 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJ17 ^@ Similarity ^@ Belongs to the proline racemase family. http://togogenome.org/gene/2604047:PDMSB3_RS11070 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z6W2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS16595 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z813 ^@ Similarity ^@ Belongs to the UPF0434 family. http://togogenome.org/gene/2604047:PDMSB3_RS16730 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFZ9 ^@ Function|||Similarity ^@ Belongs to the MsrA Met sulfoxide reductase family.|||Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. http://togogenome.org/gene/2604047:PDMSB3_RS24175 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZSQ4 ^@ Similarity ^@ Belongs to the transferase hexapeptide repeat family. http://togogenome.org/gene/2604047:PDMSB3_RS29045 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YY15 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS24905 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVR3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the autoinducer-2 exporter (AI-2E) (TC 2.A.86) family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS24630 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z343 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the UPF0065 (bug) family.|||Periplasm http://togogenome.org/gene/2604047:PDMSB3_RS15630 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z7T0 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the HAM1 NTPase family.|||Binds 1 Mg(2+) ion per subunit.|||Homodimer.|||Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. http://togogenome.org/gene/2604047:PDMSB3_RS08375 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1Z7 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the R-transferase family. Bpt subfamily.|||Cytoplasm|||Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. http://togogenome.org/gene/2604047:PDMSB3_RS34230 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWW7 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS01380 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZA16 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. http://togogenome.org/gene/2604047:PDMSB3_RS34755 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWZ1 ^@ Similarity ^@ Belongs to the ArsC family. http://togogenome.org/gene/2604047:PDMSB3_RS19530 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZH78 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.|||Cell membrane|||Membrane|||Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin. http://togogenome.org/gene/2604047:PDMSB3_RS15955 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEQ3 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS17260 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJ76 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the methylthiotransferase family. MiaB subfamily.|||Binds 2 [4Fe-4S] clusters. One cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.|||Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.|||Cytoplasm|||Monomer. http://togogenome.org/gene/2604047:PDMSB3_RS17960 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2K2 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the FtsQ/DivIB family. FtsQ subfamily.|||Cell inner membrane|||Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly.|||Part of a complex composed of FtsB, FtsL and FtsQ. http://togogenome.org/gene/2604047:PDMSB3_RS22415 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YX62 ^@ Similarity ^@ Belongs to the VgrG protein family. http://togogenome.org/gene/2604047:PDMSB3_RS19300 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZH43 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the adenosylhomocysteinase family.|||Binds 1 NAD(+) per subunit.|||Cytoplasm|||May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. http://togogenome.org/gene/2604047:PDMSB3_RS13085 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVS7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ABC-4 integral membrane protein family. LolC/E subfamily.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS34575 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPV0 ^@ Similarity ^@ Belongs to the spermidine/spermine synthase family. http://togogenome.org/gene/2604047:PDMSB3_RS17445 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZG97 ^@ Similarity ^@ Belongs to the gluconokinase GntK/GntV family. http://togogenome.org/gene/2604047:PDMSB3_RS18230 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUH1 ^@ Similarity ^@ Belongs to the peptidase M24B family. http://togogenome.org/gene/2604047:PDMSB3_RS23345 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZG54 ^@ Cofactor ^@ Binds 3 heme c groups covalently per subunit. http://togogenome.org/gene/2604047:PDMSB3_RS01950 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZA87 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the LolB family.|||Cell outer membrane|||Membrane|||Monomer. http://togogenome.org/gene/2604047:PDMSB3_RS19860 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGC0 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ATPase alpha/beta chains family.|||Cell membrane|||F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has four main subunits: a(1), b(1), b'(1) and c(9-12).|||Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. http://togogenome.org/gene/2604047:PDMSB3_RS11430 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z6Y2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS19870 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDT3 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ATPase B chain family.|||Cell membrane|||Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). The b'-subunit is a diverged and duplicated form of b found in plants and photosynthetic bacteria.|||F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.|||F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has three main subunits: a(1), b(2) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS09090 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z9U0 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the MscL family.|||Cell inner membrane|||Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.|||Homopentamer.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS27745 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZLT7 ^@ Function|||Similarity|||Subunit ^@ Belongs to the NifD/NifK/NifE/NifN family.|||Tetramer of two alpha and two beta chains. Forms complex with the iron protein (nitrogenase component 2).|||This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation. http://togogenome.org/gene/2604047:PDMSB3_RS20760 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2V8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the MgtC/SapB family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS02805 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAI3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the AIR synthase family.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS19235 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2M8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the LamB/PxpA family.|||Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.|||Forms a complex composed of PxpA, PxpB and PxpC. http://togogenome.org/gene/2604047:PDMSB3_RS17110 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGE4 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS17645 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPI9 ^@ Similarity ^@ Belongs to the OMP decarboxylase family. Type 2 subfamily. http://togogenome.org/gene/2604047:PDMSB3_RS19275 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWH8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS22305 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YX56 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS30455 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z3H5 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS11195 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVJ7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ABC-2 integral membrane protein family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS11830 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAS6 ^@ Function|||Similarity ^@ Belongs to the PEP-utilizing enzyme family.|||Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate. http://togogenome.org/gene/2604047:PDMSB3_RS05980 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBU7 ^@ Function|||Similarity|||Subunit ^@ Belongs to the acetolactate synthase small subunit family.|||Catalyzes the conversion of 2 pyruvate molecules into acetolactate in the first common step of the biosynthetic pathway of the branched-amino acids such as leucine, isoleucine, and valine.|||Dimer of large and small chains. http://togogenome.org/gene/2604047:PDMSB3_RS05350 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBL2 ^@ Function|||Similarity ^@ Belongs to the vsr family.|||May nick specific sequences that contain T:G mispairs resulting from m5C-deamination. http://togogenome.org/gene/2604047:PDMSB3_RS01610 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YSG2 ^@ Function|||Similarity|||Subunit ^@ Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.|||Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.|||The complex is composed of two ATP-binding proteins (PotA), two transmembrane proteins (PotB and PotC) and a solute-binding protein (PotD). http://togogenome.org/gene/2604047:PDMSB3_RS18075 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2K4 ^@ Similarity ^@ Belongs to the enoyl-CoA hydratase/isomerase family. http://togogenome.org/gene/2604047:PDMSB3_RS01785 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1J3 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS08885 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBI8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the YbaB/EbfC family.|||Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.|||Homodimer.|||nucleoid http://togogenome.org/gene/2604047:PDMSB3_RS00590 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8H6 ^@ Function|||Similarity|||Subunit ^@ Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln).|||Belongs to the GatC family.|||Heterotrimer of A, B and C subunits. http://togogenome.org/gene/2604047:PDMSB3_RS16875 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJ15 ^@ Caution|||Similarity|||Subcellular Location Annotation ^@ Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.|||Cell inner membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS28060 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZI40 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS04415 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUP2 ^@ Similarity ^@ Belongs to the arginase family. Agmatinase subfamily. http://togogenome.org/gene/2604047:PDMSB3_RS06390 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAI6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the oxidase-dependent Fe transporter (OFeT) (TC 9.A.10.1) family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS07010 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YSW5 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS32385 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNQ9 ^@ Similarity ^@ Belongs to the outer membrane porin (Opr) (TC 1.B.25) family. http://togogenome.org/gene/2604047:PDMSB3_RS02740 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z969 ^@ Similarity ^@ Belongs to the HSP15 family. http://togogenome.org/gene/2604047:PDMSB3_RS23930 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZND0 ^@ Subcellular Location Annotation ^@ Periplasm http://togogenome.org/gene/2604047:PDMSB3_RS09045 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z9T5 ^@ Similarity ^@ Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily. http://togogenome.org/gene/2604047:PDMSB3_RS17965 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUF9 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the D-alanine--D-alanine ligase family.|||Binds 2 magnesium or manganese ions per subunit.|||Cell wall formation.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS18155 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8F5 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the uracil-DNA glycosylase (UDG) superfamily. UNG family.|||Cytoplasm|||Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. http://togogenome.org/gene/2604047:PDMSB3_RS08610 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z9M4 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS01895 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZA81 ^@ Similarity ^@ Belongs to the GST superfamily. Zeta family. http://togogenome.org/gene/2604047:PDMSB3_RS16955 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGB9 ^@ Function|||Similarity ^@ Belongs to the AIR carboxylase family. Class I subfamily.|||Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). http://togogenome.org/gene/2604047:PDMSB3_RS19475 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZH71 ^@ Function|||Similarity ^@ Belongs to the FlgD family.|||Required for flagellar hook formation. May act as a scaffolding protein. http://togogenome.org/gene/2604047:PDMSB3_RS18735 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZH32 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS11 family.|||Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome.|||Part of the 30S ribosomal subunit. Interacts with proteins S7 and S18. Binds to IF-3. http://togogenome.org/gene/2604047:PDMSB3_RS03035 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1M5 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS02755 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAH8 ^@ Function|||Induction|||Similarity ^@ Acts as a chaperone.|||Belongs to the heat shock protein 70 family.|||By stress conditions e.g. heat shock. http://togogenome.org/gene/2604047:PDMSB3_RS01665 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCM2 ^@ Similarity ^@ Belongs to the prokaryotic GSH synthase family. http://togogenome.org/gene/2604047:PDMSB3_RS02170 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z905 ^@ Subcellular Location Annotation ^@ Periplasm http://togogenome.org/gene/2604047:PDMSB3_RS27195 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCE9 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the GroES chaperonin family.|||Cytoplasm|||Heptamer of 7 subunits arranged in a ring. Interacts with the chaperonin GroEL.|||Together with the chaperonin GroEL, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding. GroES binds to the apical surface of the GroEL ring, thereby capping the opening of the GroEL channel. http://togogenome.org/gene/2604047:PDMSB3_RS07130 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z690 ^@ Function|||Similarity|||Subunit ^@ Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.|||Homotetramer.|||Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc. http://togogenome.org/gene/2604047:PDMSB3_RS07040 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAS2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) family. Azg-like subfamily.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS34445 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPG2 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS20030 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZHM0 ^@ Function|||Similarity ^@ ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity.|||Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. http://togogenome.org/gene/2604047:PDMSB3_RS12240 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVN9 ^@ Function|||Similarity ^@ Belongs to the cyclophilin-type PPIase family.|||PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. http://togogenome.org/gene/2604047:PDMSB3_RS06000 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAD8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.|||Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-ketoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate).|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS17905 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZD19 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ZapD family.|||Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity.|||Cytoplasm|||Interacts with FtsZ. http://togogenome.org/gene/2604047:PDMSB3_RS24220 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZSR1 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the transpeptidase family. FtsI subfamily.|||Catalyzes cross-linking of the peptidoglycan cell wall at the division septum.|||Cell inner membrane http://togogenome.org/gene/2604047:PDMSB3_RS16540 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YU82 ^@ Subunit ^@ Interacts transiently with the RNA polymerase catalytic core formed by RpoA, RpoB, RpoC and RpoZ (2 alpha, 1 beta, 1 beta' and 1 omega subunit) to form the RNA polymerase holoenzyme that can initiate transcription. http://togogenome.org/gene/2604047:PDMSB3_RS04430 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YSP4 ^@ Caution|||Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-II aminoacyl-tRNA synthetase family. Type-1 seryl-tRNA synthetase subfamily.|||Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec).|||Consists of two distinct domains, a catalytic core and a N-terminal extension that is involved in tRNA binding.|||Cytoplasm|||Homodimer. The tRNA molecule binds across the dimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS30910 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YY90 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the shikimate dehydrogenase family.|||Homodimer.|||Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS11340 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCQ6 ^@ Similarity ^@ Belongs to the universal stress protein A family. http://togogenome.org/gene/2604047:PDMSB3_RS07815 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z6C3 ^@ Similarity ^@ Belongs to the peptidase A24 family. http://togogenome.org/gene/2604047:PDMSB3_RS14195 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2C3 ^@ Similarity ^@ Belongs to the helicase family. UvrD subfamily. http://togogenome.org/gene/2604047:PDMSB3_RS04540 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YSP8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the PEPCase type 1 family.|||Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.|||Homotetramer. http://togogenome.org/gene/2604047:PDMSB3_RS29690 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZLK9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS10615 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z6T0 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS14025 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZF38 ^@ Function|||Similarity ^@ Belongs to the relA/spoT family.|||In eubacteria ppGpp (guanosine 3'-diphosphate 5'-diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. http://togogenome.org/gene/2604047:PDMSB3_RS11005 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z254 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS21610 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2X7 ^@ Function|||Similarity|||Subunit ^@ Belongs to the PstS family.|||Part of the ABC transporter complex PstSACB involved in phosphate import.|||The complex is composed of two ATP-binding proteins (PstB), two transmembrane proteins (PstC and PstA) and a solute-binding protein (PstS). http://togogenome.org/gene/2604047:PDMSB3_RS18815 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFU6 ^@ Similarity ^@ Belongs to the universal ribosomal protein uL29 family. http://togogenome.org/gene/2604047:PDMSB3_RS04290 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1Q6 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS25835 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZP37 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS01285 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1I0 ^@ Similarity ^@ Belongs to the HMG-CoA lyase family. http://togogenome.org/gene/2604047:PDMSB3_RS27090 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YW06 ^@ Caution|||Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the aldehyde dehydrogenase family.|||Binds 2 potassium ions per subunit.|||Dimer of dimers.|||Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the irreversible oxidation of betaine aldehyde to the corresponding acid.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS33030 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNZ5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS11190 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCN6 ^@ Subcellular Location Annotation ^@ Cell inner membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS27660 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZTY7 ^@ Similarity ^@ Belongs to the aldehyde dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS17940 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPM3 ^@ Function|||Similarity ^@ Belongs to the LpxC family.|||Catalyzes the hydrolysis of UDP-3-O-myristoyl-N-acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis. http://togogenome.org/gene/2604047:PDMSB3_RS21095 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZRK7 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS15170 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YTZ0 ^@ Similarity ^@ Belongs to the cysteine synthase/cystathionine beta-synthase family. http://togogenome.org/gene/2604047:PDMSB3_RS05645 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZA88 ^@ Similarity ^@ Belongs to the TPP enzyme family. http://togogenome.org/gene/2604047:PDMSB3_RS16385 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YW61 ^@ Caution|||Function|||Similarity ^@ Belongs to the GART family.|||Catalyzes the transfer of a formyl group from 10-formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS08645 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKZ0 ^@ Similarity ^@ Belongs to the hyi family. http://togogenome.org/gene/2604047:PDMSB3_RS15800 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z7U2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS19310 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8S9 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS10805 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YTA6 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS19335 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2N0 ^@ Similarity ^@ Belongs to the type III secretion exporter family. http://togogenome.org/gene/2604047:PDMSB3_RS11945 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZMB9 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the polypeptide deformylase family.|||Binds 1 Fe(2+) ion.|||Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. http://togogenome.org/gene/2604047:PDMSB3_RS01705 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZA63 ^@ Function|||Similarity ^@ Belongs to the glutaredoxin family.|||Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins. http://togogenome.org/gene/2604047:PDMSB3_RS32180 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZMP3 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS17310 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJ82 ^@ Similarity ^@ Belongs to the transcriptional regulatory Fis family. http://togogenome.org/gene/2604047:PDMSB3_RS29560 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIW9 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS06790 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEL0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ExbD/TolR family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS19420 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDK9 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Bacterial flagellum basal body|||Belongs to the FliR/MopE/SpaR family.|||Cell membrane|||Membrane|||Role in flagellar biosynthesis. http://togogenome.org/gene/2604047:PDMSB3_RS27900 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZLV7 ^@ Function|||Similarity|||Subunit ^@ Belongs to the NifW family.|||Homotrimer; associates with NifD.|||May protect the nitrogenase Fe-Mo protein from oxidative damage. http://togogenome.org/gene/2604047:PDMSB3_RS11810 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z704 ^@ Similarity ^@ Belongs to the ribosome association toxin RatA family. http://togogenome.org/gene/2604047:PDMSB3_RS01855 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCP4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the cytochrome ubiquinol oxidase subunit 2 family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS02305 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z921 ^@ Caution|||Function|||Similarity ^@ Belongs to the class I-like SAM-binding methyltransferase superfamily. MenG/UbiE family.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2). http://togogenome.org/gene/2604047:PDMSB3_RS33325 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZN55 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS16640 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z818 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the argininosuccinate synthase family. Type 1 subfamily.|||Cytoplasm|||Homotetramer. http://togogenome.org/gene/2604047:PDMSB3_RS07080 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKB2 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the metallo-dependent hydrolases superfamily. HutI family.|||Binds 1 zinc or iron ion per subunit.|||Catalyzes the hydrolytic cleavage of the carbon-nitrogen bond in imidazolone-5-propanoate to yield N-formimidoyl-L-glutamate. It is the third step in the universal histidine degradation pathway.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS14345 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YTT1 ^@ Caution|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-I aminoacyl-tRNA synthetase family.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer. http://togogenome.org/gene/2604047:PDMSB3_RS19390 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZH57 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the FliL family.|||Cell inner membrane|||Controls the rotational direction of flagella during chemotaxis.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS21010 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YX02 ^@ Cofactor|||Similarity ^@ Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.|||Binds 1 [2Fe-2S] cluster.|||Binds 1 [3Fe-4S] cluster.|||Binds 1 [4Fe-4S] cluster. http://togogenome.org/gene/2604047:PDMSB3_RS34485 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPT6 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. http://togogenome.org/gene/2604047:PDMSB3_RS17025 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZF48 ^@ Function|||Similarity|||Subunit ^@ Belongs to the MoaC family.|||Catalyzes the conversion of (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP).|||Homohexamer; trimer of dimers. http://togogenome.org/gene/2604047:PDMSB3_RS15235 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z7Q0 ^@ Function|||Subcellular Location Annotation ^@ Catalyzes the Claisen rearrangement of chorismate to prephenate and the decarboxylation/dehydration of prephenate to phenylpyruvate.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS32005 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z3M6 ^@ Similarity ^@ Belongs to the phosphate/phosphite/phosphonate binding protein family. http://togogenome.org/gene/2604047:PDMSB3_RS02420 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1K9 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS18865 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZH61 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.|||Cytoplasm|||Monomer.|||This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis. http://togogenome.org/gene/2604047:PDMSB3_RS01350 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZI07 ^@ Similarity ^@ Belongs to the beta-class carbonic anhydrase family. http://togogenome.org/gene/2604047:PDMSB3_RS07375 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZC91 ^@ Similarity ^@ Belongs to the GMC oxidoreductase family. http://togogenome.org/gene/2604047:PDMSB3_RS15820 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCA5 ^@ Similarity ^@ Belongs to the NtaA/SnaA/DszA monooxygenase family. http://togogenome.org/gene/2604047:PDMSB3_RS14145 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBN5 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS28125 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZLZ4 ^@ Similarity ^@ Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. http://togogenome.org/gene/2604047:PDMSB3_RS04045 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1Q0 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS24100 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVM5 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS07220 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZER5 ^@ Function|||Similarity|||Subunit ^@ Belongs to the succinylarginine dihydrolase family.|||Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)-succinylornithine, ammonia and CO(2).|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS04365 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUP0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS01090 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z792 ^@ Similarity ^@ Belongs to the asparaginase 1 family. http://togogenome.org/gene/2604047:PDMSB3_RS18615 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFR8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ElaB/YgaM/YqjD family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS02970 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIL0 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the NrdR family.|||Binds 1 zinc ion.|||Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR-boxes. http://togogenome.org/gene/2604047:PDMSB3_RS13140 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBA3 ^@ Similarity ^@ Belongs to the HesB/IscA family. http://togogenome.org/gene/2604047:PDMSB3_RS35135 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFD8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the high-potential iron-sulfur protein (HiPIP) family.|||Homodimer.|||Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria. http://togogenome.org/gene/2604047:PDMSB3_RS35525 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YYT5 ^@ Similarity ^@ Belongs to the aldehyde dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS29995 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YY53 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the auxin efflux carrier (TC 2.A.69) family.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS25925 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZL11 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS18005 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2K3 ^@ Function|||Similarity ^@ Belongs to the transpeptidase family. FtsI subfamily.|||Catalyzes cross-linking of the peptidoglycan cell wall at the division septum. http://togogenome.org/gene/2604047:PDMSB3_RS10820 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGI2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS00560 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YSC9 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the SEDS family. MrdB/RodA subfamily.|||Cell inner membrane|||Membrane|||Peptidoglycan polymerase that is essential for cell wall elongation. http://togogenome.org/gene/2604047:PDMSB3_RS11000 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAI5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS16855 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCN7 ^@ Similarity ^@ Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. http://togogenome.org/gene/2604047:PDMSB3_RS00995 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1H3 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the methyltransferase superfamily. RsmI family.|||Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS27170 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YXQ7 ^@ Similarity ^@ Belongs to the sulfatase family. http://togogenome.org/gene/2604047:PDMSB3_RS15035 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFJ1 ^@ Similarity ^@ Belongs to the UPF0307 family. http://togogenome.org/gene/2604047:PDMSB3_RS27305 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YXR2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS11875 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YTE8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the BamA family.|||Cell outer membrane|||Part of the Bam complex.|||Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. http://togogenome.org/gene/2604047:PDMSB3_RS12030 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZE36 ^@ Function|||Similarity ^@ Belongs to the alanine racemase family.|||Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids. http://togogenome.org/gene/2604047:PDMSB3_RS00915 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z9V6 ^@ Function|||Similarity|||Subunit ^@ Belongs to the high-potential iron-sulfur protein (HiPIP) family.|||Homodimer.|||Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria. http://togogenome.org/gene/2604047:PDMSB3_RS08700 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBG4 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS14000 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVW5 ^@ Function|||Similarity ^@ Belongs to the bacterial ribosomal protein bL20 family.|||Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. http://togogenome.org/gene/2604047:PDMSB3_RS33000 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YYI2 ^@ Similarity ^@ Belongs to the autoinducer synthase family. http://togogenome.org/gene/2604047:PDMSB3_RS10415 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YT90 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS02930 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUH2 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the Pal lipoprotein family.|||Cell outer membrane|||Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.|||The Tol-Pal system is composed of five core proteins: the inner membrane proteins TolA, TolQ and TolR, the periplasmic protein TolB and the outer membrane protein Pal. They form a network linking the inner and outer membranes and the peptidoglycan layer. http://togogenome.org/gene/2604047:PDMSB3_RS05375 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZA53 ^@ Similarity ^@ Belongs to the GST superfamily. http://togogenome.org/gene/2604047:PDMSB3_RS34175 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z3S8 ^@ Similarity ^@ Belongs to the uracil-DNA glycosylase (UDG) superfamily. Type 4 (UDGa) family. http://togogenome.org/gene/2604047:PDMSB3_RS07960 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZF76 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS16990 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCQ7 ^@ Function|||Similarity ^@ Acts on leucine, isoleucine and valine.|||Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. http://togogenome.org/gene/2604047:PDMSB3_RS29605 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YY38 ^@ Similarity ^@ Belongs to the band 7/mec-2 family. http://togogenome.org/gene/2604047:PDMSB3_RS02385 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAD4 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the FdhD family.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. http://togogenome.org/gene/2604047:PDMSB3_RS28880 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZD16 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS21340 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YX16 ^@ Function|||Similarity ^@ Belongs to the GTP cyclohydrolase IV family.|||Converts GTP to 7,8-dihydroneopterin triphosphate. http://togogenome.org/gene/2604047:PDMSB3_RS28910 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YW90 ^@ Similarity ^@ Belongs to the ketopantoate reductase family. http://togogenome.org/gene/2604047:PDMSB3_RS06005 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUZ1 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS28400 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z3C3 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS08910 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCZ4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS09575 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZD93 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the bacterial sugar transferase family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS34865 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNQ4 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS35225 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPR8 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. http://togogenome.org/gene/2604047:PDMSB3_RS16480 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YW64 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS16415 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIT4 ^@ Caution|||Function|||Similarity ^@ Belongs to the dUTPase family.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA. http://togogenome.org/gene/2604047:PDMSB3_RS06080 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEC2 ^@ Function|||Similarity ^@ Belongs to the complex I 51 kDa subunit family.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. http://togogenome.org/gene/2604047:PDMSB3_RS08445 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKW2 ^@ Function|||Similarity ^@ Belongs to the SsuD family.|||Catalyzes the desulfonation of aliphatic sulfonates. http://togogenome.org/gene/2604047:PDMSB3_RS16715 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2H6 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the pyridoxamine 5'-phosphate oxidase family.|||Binds 1 FMN per subunit.|||Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS28585 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIA6 ^@ Similarity ^@ Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. http://togogenome.org/gene/2604047:PDMSB3_RS13405 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2A6 ^@ Similarity ^@ Belongs to the ABC transporter superfamily. http://togogenome.org/gene/2604047:PDMSB3_RS04485 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJ70 ^@ Function|||Similarity ^@ Belongs to the MinE family.|||Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell. http://togogenome.org/gene/2604047:PDMSB3_RS05245 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1S9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS06240 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8U8 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS02725 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCZ3 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the NAD kinase family.|||Cytoplasm|||Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS15620 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFJ5 ^@ Similarity ^@ Belongs to the YicC/YloC family. http://togogenome.org/gene/2604047:PDMSB3_RS25290 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVS9 ^@ Similarity ^@ Belongs to the aldehyde dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS27260 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YXQ9 ^@ Similarity ^@ Belongs to the transferase hexapeptide repeat family. http://togogenome.org/gene/2604047:PDMSB3_RS10270 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YT84 ^@ Similarity ^@ Belongs to the mandelate racemase/muconate lactonizing enzyme family. http://togogenome.org/gene/2604047:PDMSB3_RS10775 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGH5 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.|||Mediates influx of magnesium ions.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS07840 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YSZ8 ^@ Similarity ^@ Belongs to the GSP E family. http://togogenome.org/gene/2604047:PDMSB3_RS16355 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZG24 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the FAD-dependent oxidoreductase 2 family. NadB subfamily.|||Catalyzes the oxidation of L-aspartate to iminoaspartate.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS04235 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z824 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the dCTP deaminase family.|||Catalyzes the deamination of dCTP to dUTP.|||Homotrimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS14975 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZC00 ^@ Similarity ^@ Belongs to the acyl coenzyme A hydrolase family. http://togogenome.org/gene/2604047:PDMSB3_RS38205 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAW2 ^@ Function|||Similarity ^@ Belongs to the PqqA family.|||Required for coenzyme pyrroloquinoline quinone (PQQ) biosynthesis. PQQ is probably formed by cross-linking a specific glutamate to a specific tyrosine residue and excising these residues from the peptide. http://togogenome.org/gene/2604047:PDMSB3_RS01675 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8V5 ^@ Subcellular Location Annotation ^@ Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS15805 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNX0 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS32435 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZRM8 ^@ Function|||Similarity ^@ Belongs to the ketopantoate reductase family.|||Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. http://togogenome.org/gene/2604047:PDMSB3_RS30490 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZLX4 ^@ Similarity ^@ Belongs to the aldehyde dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS29190 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z3E0 ^@ Similarity ^@ Belongs to the peptidase C56 family. http://togogenome.org/gene/2604047:PDMSB3_RS11545 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVL1 ^@ Similarity ^@ Belongs to the universal stress protein A family. http://togogenome.org/gene/2604047:PDMSB3_RS02125 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUD5 ^@ Similarity ^@ Belongs to the PrpD family. http://togogenome.org/gene/2604047:PDMSB3_RS31940 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZE61 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS20110 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWL4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the GSP L family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS09320 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVB7 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the FKBP-type PPIase family. Tig subfamily.|||Consists of 3 domains; the N-terminus binds the ribosome, the middle domain has PPIase activity, while the C-terminus has intrinsic chaperone activity on its own.|||Cytoplasm|||Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase. http://togogenome.org/gene/2604047:PDMSB3_RS25670 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZL47 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS05650 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUX2 ^@ Similarity ^@ Belongs to the aldehyde dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS30720 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDP4 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS34905 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFA5 ^@ Similarity ^@ Belongs to the 4-hydroxybenzoyl-CoA thioesterase family. http://togogenome.org/gene/2604047:PDMSB3_RS27895 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZM41 ^@ Function|||Similarity ^@ Belongs to the alpha-IPM synthase/homocitrate synthase family.|||This protein is a Fe-Mo-cofactor biosynthetic component. http://togogenome.org/gene/2604047:PDMSB3_RS18770 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWF8 ^@ Domain|||Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS5 family.|||Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body.|||Part of the 30S ribosomal subunit. Contacts proteins S4 and S8.|||The N-terminal domain interacts with the head of the 30S subunit; the C-terminal domain interacts with the body and contacts protein S4. The interaction surface between S4 and S5 is involved in control of translational fidelity.|||With S4 and S12 plays an important role in translational accuracy. http://togogenome.org/gene/2604047:PDMSB3_RS01790 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YSG8 ^@ Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation ^@ Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily.|||Carbon 2 of the heme B porphyrin ring is defined according to the Fischer nomenclature.|||Cell membrane|||Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS20335 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZRA5 ^@ Similarity ^@ Belongs to the ParB family. http://togogenome.org/gene/2604047:PDMSB3_RS08870 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFJ9 ^@ Similarity ^@ Belongs to the thioredoxin family. http://togogenome.org/gene/2604047:PDMSB3_RS17160 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGF1 ^@ Cofactor ^@ Binds 3 heme c groups covalently per subunit. http://togogenome.org/gene/2604047:PDMSB3_RS01960 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z5Q2 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the FPG family.|||Binds 1 zinc ion per subunit.|||Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.|||Monomer. http://togogenome.org/gene/2604047:PDMSB3_RS34670 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPW2 ^@ Similarity ^@ Belongs to the AHA1 family. http://togogenome.org/gene/2604047:PDMSB3_RS02590 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z954 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS29350 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZD81 ^@ Similarity|||Subunit ^@ Belongs to the glutaminase family.|||Homotetramer. http://togogenome.org/gene/2604047:PDMSB3_RS07140 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAT6 ^@ Similarity ^@ To bacterial alkanal monooxygenase alpha and beta chains. http://togogenome.org/gene/2604047:PDMSB3_RS07970 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKP2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS30295 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJ74 ^@ Similarity ^@ Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS02745 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1L8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the GrpE family.|||Cytoplasm|||Homodimer.|||Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. http://togogenome.org/gene/2604047:PDMSB3_RS13805 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBJ5 ^@ Caution|||Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the shikimate kinase family.|||Binds 1 Mg(2+) ion per subunit.|||Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer. http://togogenome.org/gene/2604047:PDMSB3_RS14535 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZF46 ^@ Function|||Similarity ^@ Belongs to the GreA/GreB family.|||Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. http://togogenome.org/gene/2604047:PDMSB3_RS06955 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1W6 ^@ Similarity|||Subunit ^@ Belongs to the NAD(P)-dependent epimerase/dehydratase family.|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS01555 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUA7 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the radical SAM superfamily. Lipoyl synthase family.|||Binds 2 [4Fe-4S] clusters per subunit. One cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.|||Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS10645 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YT99 ^@ Caution|||Cofactor|||Similarity|||Subunit ^@ Belongs to the ferredoxin--NADP reductase type 2 family.|||Binds 1 FAD per subunit.|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS15840 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFN3 ^@ Caution|||Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.|||Belongs to the peroxiredoxin family. Prx6 subfamily.|||Cytoplasm|||Homodecamer. Pentamer of dimers that assemble into a ring structure.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||The active site is a conserved redox-active cysteine residue, the peroxidatic cysteine (C(P)), which makes the nucleophilic attack on the peroxide substrate. The peroxide oxidizes the C(P)-SH to cysteine sulfenic acid (C(P)-SOH), which then reacts with another cysteine residue, the resolving cysteine (C(R)), to form a disulfide bridge. The disulfide is subsequently reduced by an appropriate electron donor to complete the catalytic cycle. In this 1-Cys peroxiredoxin, no C(R) is present and C(P) instead forms a disulfide with a cysteine from another protein or with a small thiol molecule.|||Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. http://togogenome.org/gene/2604047:PDMSB3_RS17370 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPF2 ^@ Similarity ^@ Belongs to the universal ribosomal protein uS9 family. http://togogenome.org/gene/2604047:PDMSB3_RS07230 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAV0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the bacterial solute-binding protein 3 family.|||Periplasm http://togogenome.org/gene/2604047:PDMSB3_RS35620 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZP04 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS06820 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1W3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS10810 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDU1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the CpxP/Spy family.|||Periplasm http://togogenome.org/gene/2604047:PDMSB3_RS19810 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZQB0 ^@ Function|||Similarity ^@ In the C-terminal section; belongs to the aldehyde dehydrogenase family.|||In the N-terminal section; belongs to the proline dehydrogenase family.|||Oxidizes proline to glutamate for use as a carbon and nitrogen source. http://togogenome.org/gene/2604047:PDMSB3_RS11625 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z6Z3 ^@ Subcellular Location Annotation ^@ Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS33990 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z3S4 ^@ Similarity ^@ Belongs to the RuBisCO large chain family. http://togogenome.org/gene/2604047:PDMSB3_RS15260 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2E5 ^@ Function|||Similarity ^@ Belongs to the methyltransferase superfamily. UbiG/COQ3 family.|||O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway. http://togogenome.org/gene/2604047:PDMSB3_RS25095 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKW5 ^@ Similarity ^@ Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. http://togogenome.org/gene/2604047:PDMSB3_RS03075 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z7R2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the AAE transporter (TC 2.A.81) family.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS08775 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YT29 ^@ Similarity ^@ Belongs to the homoserine dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS06580 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8Y9 ^@ Caution|||Function|||PTM|||Similarity ^@ Acetylated. Deacetylation by the SIR2-homolog deacetylase activates the enzyme.|||Belongs to the ATP-dependent AMP-binding enzyme family.|||Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS28865 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZMK3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the autoinducer-2 exporter (AI-2E) (TC 2.A.86) family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS01600 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z7D0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS09910 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZD94 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the HupC/HyaC/HydC family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS05875 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8P5 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the KdpA family.|||Cell membrane|||Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds the extracellular potassium ions and delivers the ions to the membrane domain of KdpB through an intramembrane tunnel.|||The system is composed of three essential subunits: KdpA, KdpB and KdpC. http://togogenome.org/gene/2604047:PDMSB3_RS02625 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCY1 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS11985 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZH00 ^@ Similarity ^@ Belongs to the ArsC family. http://togogenome.org/gene/2604047:PDMSB3_RS13515 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEP7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS22845 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAT9 ^@ Similarity ^@ Belongs to the DegT/DnrJ/EryC1 family. http://togogenome.org/gene/2604047:PDMSB3_RS18425 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFP1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the HisA/HisF family.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS01695 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YSG5 ^@ Function|||Similarity|||Subunit ^@ Belongs to the phosphoglycerate mutase family. BPG-dependent PGAM subfamily.|||Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate.|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS09920 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z6N7 ^@ Similarity ^@ Belongs to the NtaA/SnaA/DszA monooxygenase family. http://togogenome.org/gene/2604047:PDMSB3_RS22985 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAV7 ^@ Similarity ^@ Belongs to the FwdC/FmdC family. http://togogenome.org/gene/2604047:PDMSB3_RS02065 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZI98 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS29665 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZMY5 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the IF-1 family.|||Component of the 30S ribosomal translation pre-initiation complex which assembles on the 30S ribosome in the order IF-2 and IF-3, IF-1 and N-formylmethionyl-tRNA(fMet); mRNA recruitment can occur at any time during PIC assembly.|||Cytoplasm|||One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. http://togogenome.org/gene/2604047:PDMSB3_RS29575 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZMX1 ^@ Similarity ^@ Belongs to the HIBADH-related family. http://togogenome.org/gene/2604047:PDMSB3_RS20125 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUR3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS20320 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIT3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the bacterial solute-binding protein SsuA/TauA family.|||Periplasm http://togogenome.org/gene/2604047:PDMSB3_RS15205 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZC29 ^@ Function|||Similarity|||Subunit ^@ Belongs to the bacterial histone-like protein family.|||Heterodimer of an alpha and a beta chain.|||This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. http://togogenome.org/gene/2604047:PDMSB3_RS20250 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUS3 ^@ Similarity ^@ Belongs to the methyl-accepting chemotaxis (MCP) protein family. http://togogenome.org/gene/2604047:PDMSB3_RS32030 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZE70 ^@ Similarity ^@ Belongs to the aldehyde dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS14960 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNK9 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS17350 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGI1 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ A Gly-cisPro motif from one monomer fits into the active site of the other monomer to allow specific chiral rejection of L-amino acids.|||An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA-based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality.|||Belongs to the DTD family.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS12055 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAV9 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Acetylates the N-terminal alanine of ribosomal protein bS18.|||Belongs to the acetyltransferase family. RimI subfamily.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS01935 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YSH1 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.|||Binds 2 Mg(2+) ions per subunit.|||Cytoplasm|||Homohexamer.|||Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P). http://togogenome.org/gene/2604047:PDMSB3_RS17975 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGH8 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the glycosyltransferase 28 family. MurG subfamily.|||Cell membrane|||Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc-(pentapeptide)GlcNAc (lipid intermediate II).|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS05900 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEA0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the drug/metabolite transporter (DMT) superfamily. Small multidrug resistance (SMR) (TC 2.A.7.1) family.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS25200 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKQ7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS28980 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZD27 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS19215 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZQ27 ^@ Similarity ^@ Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. http://togogenome.org/gene/2604047:PDMSB3_RS12005 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVN0 ^@ Similarity ^@ Belongs to the glutathione peroxidase family. http://togogenome.org/gene/2604047:PDMSB3_RS32190 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZK13 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS21590 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAC0 ^@ Function|||Similarity|||Subunit ^@ Belongs to the PstS family.|||Part of the ABC transporter complex PstSACB involved in phosphate import.|||The complex is composed of two ATP-binding proteins (PstB), two transmembrane proteins (PstC and PstA) and a solute-binding protein (PstS). http://togogenome.org/gene/2604047:PDMSB3_RS06530 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZK31 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the FliQ/MopD/SpaQ family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS21300 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2X0 ^@ Function|||Similarity|||Subunit ^@ Belongs to the DNA polymerase type-A family.|||In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.|||Single-chain monomer with multiple functions. http://togogenome.org/gene/2604047:PDMSB3_RS33735 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZP71 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS06505 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YSV1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the YscJ lipoprotein family.|||Cell outer membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS29695 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YY42 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS10655 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDK3 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS02030 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z7G6 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the purine/pyrimidine phosphoribosyltransferase family.|||Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS27915 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZU09 ^@ Function|||Similarity ^@ Belongs to the ETF-QO/FixC family.|||Part of an electron transfer system. http://togogenome.org/gene/2604047:PDMSB3_RS21330 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZRN5 ^@ Similarity ^@ Belongs to the FPP/GGPP synthase family. http://togogenome.org/gene/2604047:PDMSB3_RS18685 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZH25 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS23755 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJ50 ^@ Function|||Similarity ^@ Belongs to the PheA/TfdB FAD monooxygenase family.|||Catalyzes the insertion of one atom of molecular oxygen into position 2 of the phenyl ring of 3-(3-hydroxyphenyl)propionate (3-HPP) and hydroxycinnamic acid (3HCI). http://togogenome.org/gene/2604047:PDMSB3_RS09985 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVE2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS18785 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUJ9 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS8 family.|||One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.|||Part of the 30S ribosomal subunit. Contacts proteins S5 and S12. http://togogenome.org/gene/2604047:PDMSB3_RS16670 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YU90 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the 'phage' integrase family. XerD subfamily.|||Cytoplasm|||Forms a cyclic heterotetrameric complex composed of two molecules of XerC and two molecules of XerD.|||Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC-XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. http://togogenome.org/gene/2604047:PDMSB3_RS05665 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBQ6 ^@ Function|||Similarity ^@ Belongs to the TrhO family.|||Catalyzes oxygen-dependent 5-hydroxyuridine (ho5U) modification at position 34 in tRNAs. http://togogenome.org/gene/2604047:PDMSB3_RS18900 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8N8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the bacterial ribosomal protein bL12 family.|||Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation.|||Homodimer. Part of the ribosomal stalk of the 50S ribosomal subunit. Forms a multimeric L10(L12)X complex, where L10 forms an elongated spine to which 2 to 4 L12 dimers bind in a sequential fashion. Binds GTP-bound translation factors. http://togogenome.org/gene/2604047:PDMSB3_RS32010 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWM5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS05335 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8G4 ^@ Function|||Similarity|||Subunit ^@ Belongs to the glycosyltransferase 20 family.|||Homotetramer.|||Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-alpha-D-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor. http://togogenome.org/gene/2604047:PDMSB3_RS06045 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAE5 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the SecG family.|||Cell membrane|||Involved in protein export. Participates in an early event of protein translocation.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS17770 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGN6 ^@ Function|||Miscellaneous|||Similarity|||Subunit ^@ Belongs to the peroxiredoxin family. Tpx subfamily.|||Homodimer.|||The active site is a conserved redox-active cysteine residue, the peroxidatic cysteine (C(P)), which makes the nucleophilic attack on the peroxide substrate. The peroxide oxidizes the C(P)-SH to cysteine sulfenic acid (C(P)-SOH), which then reacts with another cysteine residue, the resolving cysteine (C(R)), to form a disulfide bridge. The disulfide is subsequently reduced by an appropriate electron donor to complete the catalytic cycle. In this atypical 2-Cys peroxiredoxin, C(R) is present in the same subunit to form an intramolecular disulfide. The disulfide is subsequently reduced by thioredoxin.|||Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. http://togogenome.org/gene/2604047:PDMSB3_RS26730 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVZ3 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the GTP cyclohydrolase II family.|||Binds 1 zinc ion per subunit.|||Catalyzes the conversion of GTP to 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate. http://togogenome.org/gene/2604047:PDMSB3_RS34475 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z3T5 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the acetokinase family.|||Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction.|||Cytoplasm|||Homodimer.|||Mg(2+). Can also accept Mn(2+). http://togogenome.org/gene/2604047:PDMSB3_RS03055 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZD35 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS19960 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWK9 ^@ Similarity ^@ Belongs to the GMC oxidoreductase family. http://togogenome.org/gene/2604047:PDMSB3_RS06120 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBW3 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I subunit 2 family.|||Cell membrane|||Membrane|||NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/2604047:PDMSB3_RS28000 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZQ05 ^@ Similarity ^@ Belongs to the aldehyde dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS12205 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z279 ^@ Similarity ^@ Belongs to the aspartokinase family. http://togogenome.org/gene/2604047:PDMSB3_RS32810 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEG9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ABC-2 integral membrane protein family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS10970 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YTB2 ^@ Similarity ^@ Belongs to the PspA/IM30 family. http://togogenome.org/gene/2604047:PDMSB3_RS19380 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2N1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the FliJ family.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS08985 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBN9 ^@ Function|||Similarity ^@ Belongs to the Dus family. DusC subfamily.|||Belongs to the dus family.|||Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs. http://togogenome.org/gene/2604047:PDMSB3_RS07270 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAV6 ^@ Similarity ^@ Belongs to the transferase hexapeptide repeat family. http://togogenome.org/gene/2604047:PDMSB3_RS27750 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPX6 ^@ Cofactor|||Function|||PTM|||Similarity|||Subunit ^@ Belongs to the NifH/BchL/ChlL family.|||Binds 1 [4Fe-4S] cluster per dimer.|||Homodimer.|||The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein.|||The reversible ADP-ribosylation of Arg inactivates the nitrogenase reductase and regulates nitrogenase activity.|||The reversible ADP-ribosylation of Arg-102 inactivates the nitrogenase reductase and regulates nitrogenase activity. http://togogenome.org/gene/2604047:PDMSB3_RS20005 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGD9 ^@ Subcellular Location Annotation ^@ Cell inner membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS17120 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJ54 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS06795 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z675 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ExbD/TolR family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS04520 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJ77 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the lyase 1 family. Argininosuccinate lyase subfamily.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS02650 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z7M3 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the UbiA prenyltransferase family.|||Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.|||Cell inner membrane http://togogenome.org/gene/2604047:PDMSB3_RS25665 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVU6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS02810 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAI2 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the IPP transferase family.|||Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A).|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer. http://togogenome.org/gene/2604047:PDMSB3_RS18195 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJL5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS26345 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPD3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the HupC/HyaC/HydC family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS26595 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVY7 ^@ Function|||Similarity ^@ Belongs to the ribonucleoside diphosphate reductase class-2 family.|||Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. http://togogenome.org/gene/2604047:PDMSB3_RS08710 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z9N7 ^@ Similarity ^@ Belongs to the peptidase C40 family. http://togogenome.org/gene/2604047:PDMSB3_RS27725 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZI01 ^@ Function|||Similarity ^@ Belongs to the NifD/NifK/NifE/NifN family.|||This protein may play a role in the biosynthesis of the prosthetic group of nitrogenase (FeMo cofactor). http://togogenome.org/gene/2604047:PDMSB3_RS23785 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZK34 ^@ Function|||Similarity|||Subunit ^@ Belongs to the AB hydrolase superfamily. MhpC family.|||Catalyzes the cleavage of the C5-C6 bond of 2-hydroxy-6-oxononadienedioate and 2-hydroxy-6-oxononatrienedioate, a dienol ring fission product of the bacterial meta-cleavage pathway for degradation of phenylpropionic acid.|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS10845 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAG2 ^@ Similarity ^@ Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS24710 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGS7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the UPF0065 (bug) family.|||Periplasm http://togogenome.org/gene/2604047:PDMSB3_RS29520 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z3E7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS27675 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZHZ4 ^@ Similarity ^@ Belongs to the bacterial solute-binding protein ModA family. http://togogenome.org/gene/2604047:PDMSB3_RS16685 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIX9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the TsaE family.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS21720 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAE1 ^@ Similarity ^@ Belongs to the acyl-CoA dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS27700 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPX0 ^@ Function ^@ Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. http://togogenome.org/gene/2604047:PDMSB3_RS19500 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWI9 ^@ Function|||Similarity ^@ Belongs to the FlgN family.|||Required for the efficient initiation of filament assembly. http://togogenome.org/gene/2604047:PDMSB3_RS01645 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z7D3 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the UbiK family.|||Cytoplasm|||Required for efficient ubiquinone (coenzyme Q) biosynthesis. UbiK is probably an accessory factor of Ubi enzymes and facilitates ubiquinone biosynthesis by acting as an assembly factor, a targeting factor, or both. http://togogenome.org/gene/2604047:PDMSB3_RS06630 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1V9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS16585 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFX9 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the XseA family.|||Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.|||Cytoplasm|||Heterooligomer composed of large and small subunits. http://togogenome.org/gene/2604047:PDMSB3_RS05695 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8L5 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS11010 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YTB4 ^@ Function|||Similarity|||Subunit ^@ Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.|||Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.|||The complex is composed of two ATP-binding proteins (PotA), two transmembrane proteins (PotB and PotC) and a solute-binding protein (PotD). http://togogenome.org/gene/2604047:PDMSB3_RS06415 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBZ9 ^@ Similarity ^@ Belongs to the pirin family. http://togogenome.org/gene/2604047:PDMSB3_RS04545 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZB65 ^@ Cofactor|||Function|||Miscellaneous|||Similarity|||Subunit ^@ Belongs to the HMBS family.|||Binds 1 dipyrromethane group covalently.|||Monomer.|||Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.|||The porphobilinogen subunits are added to the dipyrromethane group. http://togogenome.org/gene/2604047:PDMSB3_RS02320 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1K7 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the ABC1 family. UbiB subfamily.|||Cell membrane|||Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS02595 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUF5 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the SecD/SecF family. SecF subfamily.|||Cell membrane|||Forms a complex with SecD. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF-YajC and YidC.|||Membrane|||Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. http://togogenome.org/gene/2604047:PDMSB3_RS35195 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNU6 ^@ Similarity ^@ Belongs to the bacterial phospholipase C family. http://togogenome.org/gene/2604047:PDMSB3_RS13255 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZHK2 ^@ Similarity ^@ Belongs to the aspartate/glutamate racemases family. http://togogenome.org/gene/2604047:PDMSB3_RS19620 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8W7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the histone-like protein H-NS family.|||nucleoid http://togogenome.org/gene/2604047:PDMSB3_RS01795 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZA66 ^@ Similarity ^@ Belongs to the SCO1/2 family. http://togogenome.org/gene/2604047:PDMSB3_RS18765 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFT8 ^@ Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL30 family.|||Part of the 50S ribosomal subunit. http://togogenome.org/gene/2604047:PDMSB3_RS33270 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZP23 ^@ Activity Regulation|||Caution|||Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Activated by a monovalent cation that binds near, but not in, the active site. The most likely occupant of the site in vivo is potassium. Ion binding induces a conformational change that may alter substrate affinity.|||Belongs to the carbohydrate kinase PfkB family. Ribokinase subfamily.|||Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.|||Cytoplasm|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Requires a divalent cation, most likely magnesium in vivo, as an electrophilic catalyst to aid phosphoryl group transfer. It is the chelate of the metal and the nucleotide that is the actual substrate. http://togogenome.org/gene/2604047:PDMSB3_RS19465 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUN1 ^@ Similarity|||Subcellular Location Annotation ^@ Bacterial flagellum basal body|||Belongs to the flagella basal body rod proteins family. http://togogenome.org/gene/2604047:PDMSB3_RS18670 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWF4 ^@ Function|||Similarity|||Subunit ^@ Belongs to the Orn/Lys/Arg decarboxylase class-II family. LysA subfamily.|||Homodimer.|||Specifically catalyzes the decarboxylation of meso-diaminopimelate (meso-DAP) to L-lysine. http://togogenome.org/gene/2604047:PDMSB3_RS15065 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YW09 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the CobD/CbiB family.|||Cell membrane|||Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS17295 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUC6 ^@ Similarity ^@ Belongs to the peptidase M24B family. http://togogenome.org/gene/2604047:PDMSB3_RS19395 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZK58 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Bacterial flagellum basal body|||Belongs to the FliM family.|||FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS06055 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8S1 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I subunit 3 family.|||Cell membrane|||NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/2604047:PDMSB3_RS11905 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCZ7 ^@ Activity Regulation|||Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the UMP kinase family.|||Catalyzes the reversible phosphorylation of UMP to UDP.|||Cytoplasm|||Homohexamer.|||Inhibited by UTP.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS20960 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZA41 ^@ Function|||Similarity ^@ Belongs to the aconitase/IPM isomerase family.|||Catalyzes the isomerization of citrate to isocitrate via cis-aconitate. http://togogenome.org/gene/2604047:PDMSB3_RS00220 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YSC0 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Bacterial microcompartment|||Belongs to the EutC family.|||Binds between the large and small subunits.|||Catalyzes the deamination of various vicinal amino-alcohols to oxo compounds. Allows this organism to utilize ethanolamine as the sole source of nitrogen and carbon in the presence of external vitamin B12.|||The basic unit is a heterodimer which dimerizes to form tetramers. The heterotetramers trimerize; 6 large subunits form a core ring with 6 small subunits projecting outwards. http://togogenome.org/gene/2604047:PDMSB3_RS06855 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAP3 ^@ Caution|||Similarity|||Subcellular Location Annotation ^@ Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.|||Cell inner membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS18890 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGY2 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the RNA polymerase beta' chain family.|||Binds 1 Mg(2+) ion per subunit.|||Binds 2 Zn(2+) ions per subunit.|||DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.|||The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription. http://togogenome.org/gene/2604047:PDMSB3_RS08080 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YV70 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. http://togogenome.org/gene/2604047:PDMSB3_RS18660 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPW0 ^@ Function|||Similarity ^@ Belongs to the frataxin family.|||Involved in iron-sulfur (Fe-S) cluster assembly. May act as a regulator of Fe-S biogenesis. http://togogenome.org/gene/2604047:PDMSB3_RS28420 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZQ54 ^@ Similarity ^@ Belongs to the UPF0047 family. http://togogenome.org/gene/2604047:PDMSB3_RS01910 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZI77 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the bacterial CoaD family.|||Cytoplasm|||Homohexamer.|||Reversibly transfers an adenylyl group from ATP to 4'-phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. http://togogenome.org/gene/2604047:PDMSB3_RS03510 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAR8 ^@ Cofactor|||Similarity ^@ Belongs to the rubredoxin family.|||Binds 1 Fe(3+) ion per subunit. http://togogenome.org/gene/2604047:PDMSB3_RS34455 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZF45 ^@ Function|||Similarity ^@ Acts on leucine, isoleucine and valine.|||Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. http://togogenome.org/gene/2604047:PDMSB3_RS25515 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVU0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS17440 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGJ4 ^@ Function|||Similarity ^@ Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.|||Catalyzes two reactions in de novo purine nucleotide biosynthesis. Catalyzes the breakdown of 5-aminoimidazole- (N-succinylocarboxamide) ribotide (SAICAR or 2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinate) to 5-aminoimidazole-4-carboxamide ribotide (AICAR or 5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide) and fumarate, and of adenylosuccinate (ADS or N(6)-(1,2-dicarboxyethyl)-AMP) to adenosine monophosphate (AMP) and fumarate. http://togogenome.org/gene/2604047:PDMSB3_RS15140 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIC5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS20325 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIL2 ^@ Similarity ^@ Belongs to the ArsC family. http://togogenome.org/gene/2604047:PDMSB3_RS26665 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YXN8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS13880 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEV3 ^@ Similarity ^@ Belongs to the carbon-nitrogen hydrolase superfamily. Nitrilase family. http://togogenome.org/gene/2604047:PDMSB3_RS12145 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z723 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.|||Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer. http://togogenome.org/gene/2604047:PDMSB3_RS30075 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZUT0 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS20150 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGF9 ^@ Similarity ^@ Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily. http://togogenome.org/gene/2604047:PDMSB3_RS01650 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YSG4 ^@ Similarity ^@ Belongs to the P(II) protein family. http://togogenome.org/gene/2604047:PDMSB3_RS11065 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGM5 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS35215 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YX12 ^@ Similarity ^@ Belongs to the bacterial solute-binding protein 3 family. http://togogenome.org/gene/2604047:PDMSB3_RS19935 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZHE9 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS26085 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YXL1 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. http://togogenome.org/gene/2604047:PDMSB3_RS08845 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBI0 ^@ Similarity|||Subunit ^@ Belongs to the bacterial ribosomal protein bL31 family. Type B subfamily.|||Part of the 50S ribosomal subunit. http://togogenome.org/gene/2604047:PDMSB3_RS19595 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZG73 ^@ Similarity ^@ Belongs to the MotB family. http://togogenome.org/gene/2604047:PDMSB3_RS29505 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZLI2 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS02005 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCR0 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the LptA family.|||Component of the lipopolysaccharide transport and assembly complex.|||Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane.|||Periplasm http://togogenome.org/gene/2604047:PDMSB3_RS04420 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z846 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the purine-cytosine permease (2.A.39) family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS08570 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCU4 ^@ Similarity ^@ Belongs to the universal stress protein A family. http://togogenome.org/gene/2604047:PDMSB3_RS16580 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZG65 ^@ Function|||Similarity ^@ Belongs to the iron/manganese superoxide dismutase family.|||Destroys radicals which are normally produced within the cells and which are toxic to biological systems. http://togogenome.org/gene/2604047:PDMSB3_RS26985 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YXQ0 ^@ Similarity ^@ Belongs to the isocitrate and isopropylmalate dehydrogenases family. http://togogenome.org/gene/2604047:PDMSB3_RS25625 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKW9 ^@ Function|||Similarity|||Subunit ^@ Belongs to the NAD synthetase family.|||Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS32955 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEI6 ^@ Similarity ^@ Belongs to the transferase hexapeptide repeat family. http://togogenome.org/gene/2604047:PDMSB3_RS23560 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZN78 ^@ Similarity ^@ Belongs to the aldehyde dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS25600 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YXJ2 ^@ Caution|||Cofactor|||Similarity ^@ Belongs to the peptidase S8 family.|||Binds 1 Ca(2+) ion per subunit.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS03520 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z5U7 ^@ Similarity ^@ Belongs to the UPF0301 (AlgH) family. http://togogenome.org/gene/2604047:PDMSB3_RS00715 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YSD4 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the AdoMet synthase family.|||Binds 1 potassium ion per subunit.|||Binds 2 divalent ions per subunit.|||Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.|||Cytoplasm|||Homotetramer; dimer of dimers. http://togogenome.org/gene/2604047:PDMSB3_RS08695 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKZ6 ^@ Similarity ^@ Belongs to the UPF0111 family. http://togogenome.org/gene/2604047:PDMSB3_RS18170 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWD2 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the thioredoxin family. DsbC subfamily.|||Periplasm|||Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process. http://togogenome.org/gene/2604047:PDMSB3_RS11295 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVK1 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the calycin superfamily. Lipocalin family.|||Cell outer membrane|||Homodimer.|||Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids. http://togogenome.org/gene/2604047:PDMSB3_RS04410 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z9R1 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS19795 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZHC7 ^@ Similarity ^@ Belongs to the iron-sulfur dependent L-serine dehydratase family. http://togogenome.org/gene/2604047:PDMSB3_RS13580 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBG5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS08750 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZL02 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS08055 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCI6 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS18750 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJV7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the IF-1 family.|||Component of the 30S ribosomal translation pre-initiation complex which assembles on the 30S ribosome in the order IF-2 and IF-3, IF-1 and N-formylmethionyl-tRNA(fMet); mRNA recruitment can occur at any time during PIC assembly.|||Cytoplasm|||One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. http://togogenome.org/gene/2604047:PDMSB3_RS16815 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YU98 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS16705 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YW74 ^@ Similarity ^@ Belongs to the thioredoxin family. http://togogenome.org/gene/2604047:PDMSB3_RS08595 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKY0 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane|||Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import.|||Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane.|||The complex is composed of two ATP-binding proteins (CysA), two transmembrane proteins (CysT and CysW) and a solute-binding protein (CysP). http://togogenome.org/gene/2604047:PDMSB3_RS11145 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z257 ^@ Similarity ^@ Belongs to the peptidase S66 family. http://togogenome.org/gene/2604047:PDMSB3_RS27465 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPT7 ^@ Cofactor|||Similarity ^@ Belongs to the aconitase/IPM isomerase family.|||Binds 1 [4Fe-4S] cluster per subunit. http://togogenome.org/gene/2604047:PDMSB3_RS29850 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z3F5 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS31860 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YYD4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the DoxX family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS32220 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZE94 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS18000 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZD31 ^@ Caution|||Function|||PTM|||Similarity|||Subcellular Location Annotation ^@ Belongs to the MurCDEF family. MurE subfamily.|||Carboxylation is probably crucial for Mg(2+) binding and, consequently, for the gamma-phosphate positioning of ATP.|||Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS28020 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YXV4 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS34725 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZF80 ^@ Cofactor|||Similarity ^@ Belongs to the bacterial PQQ dehydrogenase family.|||Binds 1 Ca(2+) ion per subunit.|||Binds 1 PQQ group per subunit. http://togogenome.org/gene/2604047:PDMSB3_RS34045 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPA8 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS13895 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZN67 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the methyl-accepting chemotaxis (MCP) protein family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS14705 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z7K2 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PNP synthase family.|||Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.|||Cytoplasm|||Homooctamer; tetramer of dimers. http://togogenome.org/gene/2604047:PDMSB3_RS24645 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNM4 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS16575 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YU84 ^@ Similarity ^@ Belongs to the UPF0166 family. http://togogenome.org/gene/2604047:PDMSB3_RS07935 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z9E7 ^@ Similarity ^@ Belongs to the thiolase-like superfamily. Thiolase family. http://togogenome.org/gene/2604047:PDMSB3_RS16525 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEX8 ^@ Similarity ^@ In the C-terminal section; belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. http://togogenome.org/gene/2604047:PDMSB3_RS17755 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZD00 ^@ Function|||Subunit ^@ Acetyl-CoA carboxylase is a heterohexamer of biotin carboxyl carrier protein, biotin carboxylase and the two subunits of carboxyl transferase in a 2:2 complex.|||This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. http://togogenome.org/gene/2604047:PDMSB3_RS18850 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8N3 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL4 family.|||Forms part of the polypeptide exit tunnel.|||One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.|||Part of the 50S ribosomal subunit. http://togogenome.org/gene/2604047:PDMSB3_RS10235 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z236 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the HAD-like hydrolase superfamily. PhnX family.|||Binds 1 Mg(2+) ion per subunit.|||Homodimer.|||Involved in phosphonate degradation. http://togogenome.org/gene/2604047:PDMSB3_RS01310 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z5N3 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the dethiobiotin synthetase family.|||Catalyzes a mechanistically unusual reaction, the ATP-dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA, also called 7,8-diammoniononanoate) to form a ureido ring.|||Cytoplasm|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS34675 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPJ2 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the radical SAM superfamily. Lipoyl synthase family.|||Binds 2 [4Fe-4S] clusters per subunit. One cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.|||Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS07070 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEP6 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the urocanase family.|||Binds 1 NAD(+) per subunit.|||Catalyzes the conversion of urocanate to 4-imidazolone-5-propionate.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS18690 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGV1 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS18460 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJR1 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the EPSP synthase family. MurA subfamily.|||Cell wall formation. Adds enolpyruvyl to UDP-N-acetylglucosamine.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS01870 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8X5 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the sigma-70 factor family. RpoH subfamily.|||Cytoplasm|||Interacts with the RNA polymerase core enzyme.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. http://togogenome.org/gene/2604047:PDMSB3_RS19660 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKA8 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bS21 family. http://togogenome.org/gene/2604047:PDMSB3_RS14665 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNH2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the CDP-alcohol phosphatidyltransferase class-I family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS29540 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZQK9 ^@ Similarity ^@ Belongs to the peptidase M20A family. ArgE subfamily. http://togogenome.org/gene/2604047:PDMSB3_RS11565 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZE37 ^@ Caution ^@ Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS08590 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z6G0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the prokaryotic sulfate-binding protein family.|||Periplasm http://togogenome.org/gene/2604047:PDMSB3_RS15055 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNM7 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.|||Binds 1 zinc ion per subunit.|||Cytoplasm|||Monomer. Associates with 30S ribosomal subunit, binds 16S rRNA.|||One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit. http://togogenome.org/gene/2604047:PDMSB3_RS20085 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZHG9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the GSP G family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS33330 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YYJ6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS18120 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWD1 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the ribulose-phosphate 3-epimerase family.|||Binds 1 divalent metal cation per subunit.|||Catalyzes the reversible epimerization of D-ribulose 5-phosphate to D-xylulose 5-phosphate. http://togogenome.org/gene/2604047:PDMSB3_RS08585 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFF9 ^@ Function|||Similarity|||Subunit ^@ Belongs to the peptidase S24 family.|||Homodimer.|||Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. http://togogenome.org/gene/2604047:PDMSB3_RS03495 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1N7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the GroES chaperonin family.|||Cytoplasm|||Heptamer of 7 subunits arranged in a ring. Interacts with the chaperonin GroEL.|||Together with the chaperonin GroEL, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding. GroES binds to the apical surface of the GroEL ring, thereby capping the opening of the GroEL channel. http://togogenome.org/gene/2604047:PDMSB3_RS19435 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8U5 ^@ Similarity|||Subcellular Location Annotation ^@ Bacterial flagellum|||Belongs to the flagella basal body rod proteins family.|||Secreted http://togogenome.org/gene/2604047:PDMSB3_RS18935 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZH61 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.|||Cytoplasm|||Monomer.|||This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis. http://togogenome.org/gene/2604047:PDMSB3_RS14285 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVX6 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS00185 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z9L7 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS24260 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNH1 ^@ Similarity ^@ Belongs to the uracil-DNA glycosylase (UDG) superfamily. Type 4 (UDGa) family. http://togogenome.org/gene/2604047:PDMSB3_RS12945 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZB81 ^@ Similarity ^@ Belongs to the YfgM family. http://togogenome.org/gene/2604047:PDMSB3_RS18350 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGX3 ^@ Similarity ^@ Belongs to the GST superfamily. HSP26 family. http://togogenome.org/gene/2604047:PDMSB3_RS17335 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCU6 ^@ Caution|||Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the RuvB family.|||Cytoplasm|||Has 3 domains, the large (RuvB-L) and small ATPase (RuvB-S) domains and the C-terminal head (RuvB-H) domain. The head domain binds DNA, while the ATPase domains jointly bind ATP, ADP or are empty depending on the state of the subunit in the translocation cycle. During a single DNA translocation step the structure of each domain remains the same, but their relative positions change.|||Homohexamer. Forms an RuvA(8)-RuvB(12)-Holliday junction (HJ) complex. HJ DNA is sandwiched between 2 RuvA tetramers; dsDNA enters through RuvA and exits via RuvB. An RuvB hexamer assembles on each DNA strand where it exits the tetramer. Each RuvB hexamer is contacted by two RuvA subunits (via domain III) on 2 adjacent RuvB subunits; this complex drives branch migration. In the full resolvosome a probable DNA-RuvA(4)-RuvB(12)-RuvC(2) complex forms which resolves the HJ.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||The RuvA-RuvB-RuvC complex processes Holliday junction (HJ) DNA during genetic recombination and DNA repair, while the RuvA-RuvB complex plays an important role in the rescue of blocked DNA replication forks via replication fork reversal (RFR). RuvA specifically binds to HJ cruciform DNA, conferring on it an open structure. The RuvB hexamer acts as an ATP-dependent pump, pulling dsDNA into and through the RuvAB complex. RuvB forms 2 homohexamers on either side of HJ DNA bound by 1 or 2 RuvA tetramers; 4 subunits per hexamer contact DNA at a time. Coordinated motions by a converter formed by DNA-disengaged RuvB subunits stimulates ATP hydrolysis and nucleotide exchange. Immobilization of the converter enables RuvB to convert the ATP-contained energy into a lever motion, pulling 2 nucleotides of DNA out of the RuvA tetramer per ATP hydrolyzed, thus driving DNA branch migration. The RuvB motors rotate together with the DNA substrate, which together with the progressing nucleotide cycle form the mechanistic basis for DNA recombination by continuous HJ branch migration. Branch migration allows RuvC to scan DNA until it finds its consensus sequence, where it cleaves and resolves cruciform DNA. http://togogenome.org/gene/2604047:PDMSB3_RS10915 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGJ8 ^@ Similarity ^@ Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. http://togogenome.org/gene/2604047:PDMSB3_RS15625 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZII3 ^@ Function|||Similarity|||Subunit ^@ Belongs to the RNase PH family.|||Homohexameric ring arranged as a trimer of dimers.|||Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. http://togogenome.org/gene/2604047:PDMSB3_RS12935 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDF4 ^@ Function|||Similarity|||Subunit ^@ Associates with the 50S ribosomal subunit.|||Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.|||GTPase that plays an essential role in the late steps of ribosome biogenesis. http://togogenome.org/gene/2604047:PDMSB3_RS14755 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z7K6 ^@ Similarity ^@ Belongs to the sigma-70 factor family. ECF subfamily. http://togogenome.org/gene/2604047:PDMSB3_RS11915 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAU1 ^@ Similarity ^@ Belongs to the universal ribosomal protein uS2 family. http://togogenome.org/gene/2604047:PDMSB3_RS28355 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z3C2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS18795 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGW6 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL5 family.|||Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA and the P site tRNA. Forms a bridge to the 30S subunit in the 70S ribosome.|||This is 1 of the proteins that bind and probably mediate the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. http://togogenome.org/gene/2604047:PDMSB3_RS07715 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCE2 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the NusA family.|||Cytoplasm|||Monomer. Binds directly to the core enzyme of the DNA-dependent RNA polymerase and to nascent RNA.|||Participates in both transcription termination and antitermination. http://togogenome.org/gene/2604047:PDMSB3_RS18915 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDE5 ^@ Function|||PTM|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL11 family.|||Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.|||One or more lysine residues are methylated.|||Part of the ribosomal stalk of the 50S ribosomal subunit. Interacts with L10 and the large rRNA to form the base of the stalk. L10 forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex. http://togogenome.org/gene/2604047:PDMSB3_RS15005 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNM0 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the thymidylate synthase family. Bacterial-type ThyA subfamily.|||Catalyzes the reductive methylation of 2'-deoxyuridine-5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.|||Cytoplasm|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS23870 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVL5 ^@ Function|||Similarity ^@ Belongs to the HAD-like hydrolase superfamily. S-2-haloalkanoic acid dehalogenase family.|||Catalyzes the hydrolytic dehalogenation of small (S)-2-haloalkanoic acids to yield the corresponding (R)-2-hydroxyalkanoic acids. http://togogenome.org/gene/2604047:PDMSB3_RS06090 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJX2 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I subunit 1 family.|||Cell membrane|||Membrane|||NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. http://togogenome.org/gene/2604047:PDMSB3_RS22930 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZMY6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the TonB family.|||Cell inner membrane http://togogenome.org/gene/2604047:PDMSB3_RS11850 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z706 ^@ Function|||Similarity ^@ Belongs to the LpxB family.|||Condensation of UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. http://togogenome.org/gene/2604047:PDMSB3_RS32465 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z3N9 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS29200 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZMQ6 ^@ Similarity ^@ Belongs to the type IB topoisomerase family. http://togogenome.org/gene/2604047:PDMSB3_RS30130 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZLR9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS15945 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z7V1 ^@ Subcellular Location Annotation ^@ Secreted http://togogenome.org/gene/2604047:PDMSB3_RS29860 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZN10 ^@ Cofactor|||Function|||Miscellaneous|||Similarity|||Subunit ^@ Belongs to the mandelate racemase/muconate lactonizing enzyme family. RhamD subfamily.|||Binds 1 Mg(2+) ion per subunit.|||Catalyzes the dehydration of L-rhamnonate to 2-keto-3-deoxy-L-rhamnonate (KDR).|||Homooctamer; tetramer of dimers.|||Reaction proceeds via a syn dehydration. http://togogenome.org/gene/2604047:PDMSB3_RS30415 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNA1 ^@ Similarity ^@ Belongs to the acyl-CoA dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS29150 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZMP8 ^@ Similarity ^@ Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. http://togogenome.org/gene/2604047:PDMSB3_RS15090 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIC2 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bS16 family. http://togogenome.org/gene/2604047:PDMSB3_RS19350 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZH49 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the FliS family.|||cytosol http://togogenome.org/gene/2604047:PDMSB3_RS06085 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z645 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the complex I 75 kDa subunit family.|||Binds 1 [2Fe-2S] cluster per subunit.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/2604047:PDMSB3_RS19600 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWJ3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the MotA family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS18455 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGR1 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ATP phosphoribosyltransferase family. Short subfamily.|||Catalyzes the condensation of ATP and 5-phosphoribose 1-diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity.|||Cytoplasm|||Heteromultimer composed of HisG and HisZ subunits.|||Lacks the C-terminal regulatory region which is replaced by HisZ. http://togogenome.org/gene/2604047:PDMSB3_RS25765 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z367 ^@ Similarity ^@ Belongs to the nitroreductase family. HadB/RutE subfamily. http://togogenome.org/gene/2604047:PDMSB3_RS18130 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2K5 ^@ Function|||Similarity|||Subunit ^@ Belongs to the anthranilate synthase component I family.|||Heterotetramer consisting of two non-identical subunits: a beta subunit (TrpG) and a large alpha subunit (TrpE).|||Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia. http://togogenome.org/gene/2604047:PDMSB3_RS33455 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZP45 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS09670 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDB1 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the malate synthase family. GlcB subfamily.|||Cytoplasm|||Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer. http://togogenome.org/gene/2604047:PDMSB3_RS27435 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZTW3 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS23650 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZN91 ^@ Caution|||Function|||Similarity ^@ Belongs to the UbiX/PAD1 family.|||Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS09375 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVB8 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the GPI family.|||Catalyzes the reversible isomerization of glucose-6-phosphate to fructose-6-phosphate.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS05365 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z612 ^@ Similarity ^@ Belongs to the UPF0337 (CsbD) family. http://togogenome.org/gene/2604047:PDMSB3_RS06785 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZC13 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the exbB/tolQ family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS20075 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUR1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the GSP F family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS18705 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPW6 ^@ Similarity|||Subunit ^@ Belongs to the ALAD family.|||Homooctamer. http://togogenome.org/gene/2604047:PDMSB3_RS21335 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZHZ2 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the transketolase family. DXPS subfamily.|||Binds 1 Mg(2+) ion per subunit.|||Binds 1 thiamine pyrophosphate per subunit.|||Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP).|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS22320 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVE9 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS24770 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKS0 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS16570 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2H3 ^@ Similarity ^@ Belongs to the UPF0166 family. http://togogenome.org/gene/2604047:PDMSB3_RS14790 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZF78 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PlsX family.|||Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.|||Cytoplasm|||Homodimer. Probably interacts with PlsY. http://togogenome.org/gene/2604047:PDMSB3_RS05715 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZE76 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the RdgC family.|||May be involved in recombination.|||nucleoid http://togogenome.org/gene/2604047:PDMSB3_RS25045 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKV7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS25530 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNZ6 ^@ Similarity ^@ Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. http://togogenome.org/gene/2604047:PDMSB3_RS19985 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZHF5 ^@ Similarity ^@ Belongs to the biopterin-dependent aromatic amino acid hydroxylase family. http://togogenome.org/gene/2604047:PDMSB3_RS24060 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZK73 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS29005 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z3D6 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.|||Cytoplasm|||Homodimer.|||Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. http://togogenome.org/gene/2604047:PDMSB3_RS15520 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFH8 ^@ Similarity ^@ Belongs to the peptidase M1 family. http://togogenome.org/gene/2604047:PDMSB3_RS12235 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZD51 ^@ Function|||Similarity ^@ Belongs to the cyclophilin-type PPIase family.|||PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. http://togogenome.org/gene/2604047:PDMSB3_RS08315 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YV78 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS31915 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJX1 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the NRAMP family.|||Cell membrane|||H(+)-stimulated, divalent metal cation uptake system. http://togogenome.org/gene/2604047:PDMSB3_RS34155 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZVX1 ^@ Similarity ^@ Belongs to the aldehyde dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS05915 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUY7 ^@ Similarity ^@ Belongs to the truncated hemoglobin family. Group II subfamily. http://togogenome.org/gene/2604047:PDMSB3_RS22925 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJQ6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the exbB/tolQ family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS27335 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPR9 ^@ Similarity ^@ Belongs to the CmpA/NrtA family. http://togogenome.org/gene/2604047:PDMSB3_RS11865 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAT5 ^@ Function|||Similarity|||Subunit ^@ Belongs to the transferase hexapeptide repeat family. LpxD subfamily.|||Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.|||Homotrimer. http://togogenome.org/gene/2604047:PDMSB3_RS09940 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZA50 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS00545 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YU41 ^@ Cofactor|||Similarity ^@ Belongs to the PTPS family. QueD subfamily.|||Binds 1 zinc ion per subunit. http://togogenome.org/gene/2604047:PDMSB3_RS14310 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZF13 ^@ Function|||Similarity|||Subunit ^@ Belongs to the threonine aldolase family.|||Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde.|||Homotetramer. http://togogenome.org/gene/2604047:PDMSB3_RS30650 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWG2 ^@ Similarity ^@ Belongs to the bacterial ring-hydroxylating dioxygenase alpha subunit family. http://togogenome.org/gene/2604047:PDMSB3_RS15215 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YTZ4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the cytidylate kinase family. Type 1 subfamily.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS09795 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVD5 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. http://togogenome.org/gene/2604047:PDMSB3_RS02800 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YSJ4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the autoinducer-2 exporter (AI-2E) (TC 2.A.86) family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS13365 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YTM4 ^@ Similarity ^@ Belongs to the metallophosphoesterase superfamily. YfcE family. http://togogenome.org/gene/2604047:PDMSB3_RS02780 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z975 ^@ Function|||Similarity ^@ Belongs to the HPPK family.|||Catalyzes the transfer of pyrophosphate from adenosine triphosphate (ATP) to 6-hydroxymethyl-7,8-dihydropterin, an enzymatic step in folate biosynthesis pathway. http://togogenome.org/gene/2604047:PDMSB3_RS17065 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z859 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the RecA family.|||Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS15405 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZC55 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.|||Binds 1 zinc ion per subunit.|||Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia. http://togogenome.org/gene/2604047:PDMSB3_RS12080 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z721 ^@ Similarity ^@ Belongs to the universal stress protein A family. http://togogenome.org/gene/2604047:PDMSB3_RS16315 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIS2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS20225 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZQF5 ^@ Domain|||Function|||PTM|||Similarity|||Subcellular Location Annotation ^@ Belongs to the CheB family.|||Contains a C-terminal catalytic domain, and an N-terminal region which modulates catalytic activity.|||Cytoplasm|||Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid.|||Phosphorylated by CheA. Phosphorylation of the N-terminal regulatory domain activates the methylesterase activity. http://togogenome.org/gene/2604047:PDMSB3_RS19290 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUM3 ^@ Similarity ^@ Belongs to the methylenetetrahydrofolate reductase family. http://togogenome.org/gene/2604047:PDMSB3_RS06535 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAK1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the FliR/MopE/SpaR family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS17620 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUE1 ^@ Similarity ^@ In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family.|||In the N-terminal section; belongs to the malic enzymes family. http://togogenome.org/gene/2604047:PDMSB3_RS26325 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZHF8 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS33895 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKQ4 ^@ Function|||Similarity|||Subunit ^@ Belongs to the LeuD family. LeuD type 1 subfamily.|||Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate.|||Heterodimer of LeuC and LeuD. http://togogenome.org/gene/2604047:PDMSB3_RS35100 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNT4 ^@ Similarity ^@ Belongs to the YciI family. http://togogenome.org/gene/2604047:PDMSB3_RS20745 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZHP2 ^@ Subcellular Location Annotation ^@ Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS25855 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YXK3 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the DyP-type peroxidase family. EfeB subfamily.|||Binds 1 heme b (iron(II)-protoporphyrin IX) group non-covalently per subunit.|||Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the protoporphyrin ring intact. http://togogenome.org/gene/2604047:PDMSB3_RS29085 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZLC4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS00565 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z9R8 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the transpeptidase family. MrdA subfamily.|||Catalyzes cross-linking of the peptidoglycan cell wall.|||Cell inner membrane http://togogenome.org/gene/2604047:PDMSB3_RS27070 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKJ9 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS17850 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWC0 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the glutamate 5-kinase family.|||Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS21005 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZHT7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.|||Cell inner membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS17745 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFE5 ^@ Function|||Similarity|||Subunit ^@ Belongs to the type-II 3-dehydroquinase family.|||Catalyzes a trans-dehydration via an enolate intermediate.|||Homododecamer. http://togogenome.org/gene/2604047:PDMSB3_RS13265 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVT3 ^@ Similarity ^@ Belongs to the VgrG protein family. http://togogenome.org/gene/2604047:PDMSB3_RS15100 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNN2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS34925 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZL59 ^@ Similarity ^@ Belongs to the GST superfamily. http://togogenome.org/gene/2604047:PDMSB3_RS23070 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJS2 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the class II fructose-bisphosphate aldolase family.|||Binds 2 Zn(2+) ions per subunit. One is catalytic and the other provides a structural contribution.|||Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.|||One is catalytic and the other provides a structural contribution. http://togogenome.org/gene/2604047:PDMSB3_RS20850 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YV77 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS22650 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJM0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the UPF0718 family.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS17460 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPG5 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the IlvD/Edd family.|||Binds 1 [4Fe-4S] cluster.|||Catalyzes the dehydration of 6-phospho-D-gluconate to 2-dehydro-3-deoxy-6-phospho-D-gluconate. http://togogenome.org/gene/2604047:PDMSB3_RS15850 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z7U6 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS24360 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZSS9 ^@ Function|||Similarity|||Subunit ^@ Belongs to the 6-phosphogluconate dehydrogenase family.|||Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS01305 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCI0 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the radical SAM superfamily. Biotin synthase family.|||Binds 1 [2Fe-2S] cluster. The cluster is coordinated with 3 cysteines and 1 arginine.|||Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.|||Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism.|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS25110 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBN4 ^@ Function|||Subcellular Location Annotation ^@ Cell inner membrane|||Member of a two-component regulatory system. http://togogenome.org/gene/2604047:PDMSB3_RS07900 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCJ8 ^@ Similarity ^@ Belongs to the sigma-70 factor family. ECF subfamily. http://togogenome.org/gene/2604047:PDMSB3_RS25930 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZP77 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS05570 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBP2 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the Nth/MutY family.|||Binds 1 [4Fe-4S] cluster.|||DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate. http://togogenome.org/gene/2604047:PDMSB3_RS21020 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2W4 ^@ Similarity ^@ Belongs to the citrate synthase family. http://togogenome.org/gene/2604047:PDMSB3_RS33365 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEN7 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS10670 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZLT4 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS05805 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z632 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the Maf family. YhdE subfamily.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. http://togogenome.org/gene/2604047:PDMSB3_RS18920 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2M2 ^@ Function|||Similarity ^@ Belongs to the NusG family.|||Participates in transcription elongation, termination and antitermination. http://togogenome.org/gene/2604047:PDMSB3_RS07765 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z6C1 ^@ Function|||Similarity ^@ Belongs to the alpha-ketoglutarate dehydrogenase family.|||E1 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the decarboxylation of 2-oxoglutarate, the first step in the conversion of 2-oxoglutarate to succinyl-CoA and CO(2). http://togogenome.org/gene/2604047:PDMSB3_RS29030 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZD34 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS17830 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJG0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the UPF0056 (MarC) family.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS32580 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEE0 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS30655 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZND5 ^@ Similarity ^@ Belongs to the bacterial ring-hydroxylating dioxygenase beta subunit family. http://togogenome.org/gene/2604047:PDMSB3_RS24345 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKB4 ^@ Caution|||Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the sirtuin family. Class II subfamily.|||Binds 1 zinc ion per subunit.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form. http://togogenome.org/gene/2604047:PDMSB3_RS11895 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z709 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the UPP synthase family.|||Binds 2 magnesium ions per subunit.|||Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS00450 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1F8 ^@ Similarity ^@ Belongs to the thioesterase PaaI family. http://togogenome.org/gene/2604047:PDMSB3_RS31935 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNK7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the nlpA lipoprotein family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS37645 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YSS7 ^@ Function|||Similarity ^@ Belongs to the FtsK/SpoIIIE/SftA family.|||Essential cell division protein that coordinates cell division and chromosome segregation. The N-terminus is involved in assembly of the cell-division machinery. The C-terminus functions as a DNA motor that moves dsDNA in an ATP-dependent manner towards the dif recombination site, which is located within the replication terminus region. Translocation stops specifically at Xer-dif sites, where FtsK interacts with the Xer recombinase, allowing activation of chromosome unlinking by recombination. FtsK orienting polar sequences (KOPS) guide the direction of DNA translocation. FtsK can remove proteins from DNA as it translocates, but translocation stops specifically at XerCD-dif site, thereby preventing removal of XerC and XerD from dif. http://togogenome.org/gene/2604047:PDMSB3_RS30885 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZN50 ^@ Similarity ^@ Belongs to the sigma-70 factor family. ECF subfamily. http://togogenome.org/gene/2604047:PDMSB3_RS17760 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2J8 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the methyltransferase superfamily. PrmA family.|||Cytoplasm|||Methylates ribosomal protein L11. http://togogenome.org/gene/2604047:PDMSB3_RS17980 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8E0 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the SEDS family. FtsW subfamily.|||Cell inner membrane|||Membrane|||Peptidoglycan polymerase that is essential for cell division. http://togogenome.org/gene/2604047:PDMSB3_RS18695 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJV0 ^@ PTM ^@ Binds 2 heme c groups covalently per subunit. http://togogenome.org/gene/2604047:PDMSB3_RS14885 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFG7 ^@ Function|||PTM|||Similarity ^@ Belongs to the NAPRTase family.|||Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP.|||Transiently phosphorylated on a His residue during the reaction cycle. Phosphorylation strongly increases the affinity for substrates and increases the rate of nicotinate D-ribonucleotide production. Dephosphorylation regenerates the low-affinity form of the enzyme, leading to product release. http://togogenome.org/gene/2604047:PDMSB3_RS14630 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YTV1 ^@ Subcellular Location Annotation ^@ Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS26360 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZK86 ^@ Function|||Subcellular Location Annotation ^@ Cell inner membrane|||Member of a two-component regulatory system. http://togogenome.org/gene/2604047:PDMSB3_RS06750 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZK64 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS01980 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z7G3 ^@ Domain|||Function|||Miscellaneous|||Similarity|||Subunit ^@ Belongs to the HPrK/P family.|||Both phosphorylation and phosphorolysis are carried out by the same active site and suggest a common mechanism for both reactions.|||Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr).|||Homohexamer.|||The Walker A ATP-binding motif also binds Pi and PPi. http://togogenome.org/gene/2604047:PDMSB3_RS30905 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZM44 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS16720 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YU93 ^@ Similarity ^@ Belongs to the CFA/CMAS family. http://togogenome.org/gene/2604047:PDMSB3_RS35160 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z3V0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the TonB-dependent receptor family.|||Cell outer membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS08890 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVA0 ^@ Function|||Similarity ^@ Belongs to the RecR family.|||May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. http://togogenome.org/gene/2604047:PDMSB3_RS17585 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGB6 ^@ Similarity ^@ Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS07055 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1W8 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS33385 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKI4 ^@ Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation ^@ Belongs to the MGMT family.|||Cytoplasm|||Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.|||This enzyme catalyzes only one turnover and therefore is not strictly catalytic. According to one definition, an enzyme is a biocatalyst that acts repeatedly and over many reaction cycles. http://togogenome.org/gene/2604047:PDMSB3_RS33580 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YYK6 ^@ Similarity ^@ Belongs to the sigma-70 factor family. ECF subfamily. http://togogenome.org/gene/2604047:PDMSB3_RS30515 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWF7 ^@ Similarity ^@ Belongs to the glutamine synthetase family. http://togogenome.org/gene/2604047:PDMSB3_RS21505 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZI22 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the methyl-accepting chemotaxis (MCP) protein family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS18925 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUK7 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the SecE/SEC61-gamma family.|||Component of the Sec protein translocase complex. Heterotrimer consisting of SecY, SecE and SecG subunits. The heterotrimers can form oligomers, although 1 heterotrimer is thought to be able to translocate proteins. Interacts with the ribosome. Interacts with SecDF, and other proteins may be involved. Interacts with SecA.|||Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS05990 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEB2 ^@ Cofactor|||Function|||PTM|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the phosphatidylserine decarboxylase family. PSD-A subfamily.|||Binds 1 pyruvoyl group covalently per subunit.|||Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).|||Cell membrane|||Heterodimer of a large membrane-associated beta subunit and a small pyruvoyl-containing alpha subunit.|||Is synthesized initially as an inactive proenzyme. Formation of the active enzyme involves a self-maturation process in which the active site pyruvoyl group is generated from an internal serine residue via an autocatalytic post-translational modification. Two non-identical subunits are generated from the proenzyme in this reaction, and the pyruvate is formed at the N-terminus of the alpha chain, which is derived from the carboxyl end of the proenzyme. The post-translation cleavage follows an unusual pathway, termed non-hydrolytic serinolysis, in which the side chain hydroxyl group of the serine supplies its oxygen atom to form the C-terminus of the beta chain, while the remainder of the serine residue undergoes an oxidative deamination to produce ammonia and the pyruvoyl prosthetic group on the alpha chain. http://togogenome.org/gene/2604047:PDMSB3_RS06295 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YV01 ^@ Similarity ^@ Belongs to the IS21/IS1162 putative ATP-binding protein family. http://togogenome.org/gene/2604047:PDMSB3_RS27910 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCN5 ^@ Cofactor|||Similarity ^@ Belongs to the ETF alpha-subunit/FixB family.|||Binds 1 FAD per dimer. http://togogenome.org/gene/2604047:PDMSB3_RS02945 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YSK0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ExbD/TolR family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS14930 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2D8 ^@ Similarity ^@ Belongs to the helicase family. UvrD subfamily. http://togogenome.org/gene/2604047:PDMSB3_RS16870 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZG20 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS28180 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCS5 ^@ Similarity ^@ Belongs to the iron/ascorbate-dependent oxidoreductase family. http://togogenome.org/gene/2604047:PDMSB3_RS00610 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YSD0 ^@ Cofactor|||Similarity ^@ Belongs to the DNA repair enzymes AP/ExoA family.|||Probably binds two magnesium or manganese ions per subunit. http://togogenome.org/gene/2604047:PDMSB3_RS20045 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z919 ^@ Similarity ^@ Belongs to the bacterial histone-like protein family. http://togogenome.org/gene/2604047:PDMSB3_RS18355 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGP6 ^@ Cofactor ^@ Binds 1 heme c group covalently per subunit. http://togogenome.org/gene/2604047:PDMSB3_RS21060 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZF83 ^@ Similarity ^@ Belongs to the TrpF family. http://togogenome.org/gene/2604047:PDMSB3_RS20700 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWY8 ^@ Similarity ^@ Belongs to the UxaA family. http://togogenome.org/gene/2604047:PDMSB3_RS21645 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFG8 ^@ Caution ^@ Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS10260 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZA89 ^@ Similarity|||Subunit ^@ Belongs to the muconolactone Delta-isomerase family.|||Homodecamer. http://togogenome.org/gene/2604047:PDMSB3_RS16845 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZF24 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ABC-3 integral membrane protein family.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS13475 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z7A2 ^@ Similarity ^@ In the C-terminal section; belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. http://togogenome.org/gene/2604047:PDMSB3_RS19285 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2M9 ^@ Similarity ^@ Belongs to the bacterial solute-binding protein 5 family. http://togogenome.org/gene/2604047:PDMSB3_RS21265 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJ72 ^@ Similarity ^@ Belongs to the pseudomonas-type ThrB family. http://togogenome.org/gene/2604047:PDMSB3_RS01750 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZA68 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the heme-copper respiratory oxidase family.|||Cell membrane|||Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS11820 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCY3 ^@ Similarity ^@ Belongs to the band 7/mec-2 family. http://togogenome.org/gene/2604047:PDMSB3_RS01655 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZA48 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ammonia transporter channel (TC 1.A.11.2) family.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS21730 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZI62 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. http://togogenome.org/gene/2604047:PDMSB3_RS18585 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUJ0 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS26660 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKD7 ^@ Cofactor ^@ Binds 3 heme c groups covalently per subunit. http://togogenome.org/gene/2604047:PDMSB3_RS05835 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YST3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the TACO1 family.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS13045 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z298 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the FtsB family.|||Cell inner membrane|||Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.|||Part of a complex composed of FtsB, FtsL and FtsQ. http://togogenome.org/gene/2604047:PDMSB3_RS04620 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZB80 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PPase family.|||Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.|||Cytoplasm|||Homohexamer. http://togogenome.org/gene/2604047:PDMSB3_RS35030 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YX03 ^@ Similarity ^@ In the C-terminal section; belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. http://togogenome.org/gene/2604047:PDMSB3_RS00705 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z763 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the diaminopimelate epimerase family.|||Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS32310 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZMR0 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS15160 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YW13 ^@ Similarity ^@ Belongs to the histone deacetylase family. http://togogenome.org/gene/2604047:PDMSB3_RS08755 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBG9 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS02735 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIH9 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the ferrochelatase family.|||Catalyzes the ferrous insertion into protoporphyrin IX.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS06690 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZC03 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS08810 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z9P9 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ClpA/ClpB family.|||Cytoplasm|||Homohexamer. The oligomerization is ATP-dependent.|||Homohexamer; The oligomerization is ATP-dependent.|||Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE. Acts before DnaK, in the processing of protein aggregates. Protein binding stimulates the ATPase activity; ATP hydrolysis unfolds the denatured protein aggregates, which probably helps expose new hydrophobic binding sites on the surface of ClpB-bound aggregates, contributing to the solubilization and refolding of denatured protein aggregates by DnaK. http://togogenome.org/gene/2604047:PDMSB3_RS23895 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJ73 ^@ Similarity ^@ Belongs to the aconitase/IPM isomerase family. http://togogenome.org/gene/2604047:PDMSB3_RS21550 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZI30 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS33405 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZP40 ^@ Similarity ^@ Belongs to the AB hydrolase superfamily. Lipase family. http://togogenome.org/gene/2604047:PDMSB3_RS34000 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPL5 ^@ Function|||Subcellular Location Annotation ^@ Cell inner membrane|||Membrane|||Part of the tripartite ATP-independent periplasmic (TRAP) transport system. http://togogenome.org/gene/2604047:PDMSB3_RS35685 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YX32 ^@ Similarity ^@ Belongs to the acylphosphatase family. http://togogenome.org/gene/2604047:PDMSB3_RS04665 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZB87 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS14490 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZF39 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.|||Cell inner membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS27870 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKV3 ^@ Function|||Similarity ^@ A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.|||Belongs to the NifU family. http://togogenome.org/gene/2604047:PDMSB3_RS00865 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z9V0 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS19470 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZHD7 ^@ Similarity|||Subcellular Location Annotation ^@ Bacterial flagellum basal body|||Belongs to the flagella basal body rod proteins family. http://togogenome.org/gene/2604047:PDMSB3_RS14135 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNA0 ^@ Similarity ^@ Belongs to the SOS response-associated peptidase family. http://togogenome.org/gene/2604047:PDMSB3_RS11370 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDU9 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the ATPase A chain family.|||Cell membrane|||Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS02350 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZID1 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the phospholipase D family. Cardiolipin synthase subfamily. ClsB sub-subfamily.|||Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS14555 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZE60 ^@ Similarity ^@ Belongs to the transglycosylase Slt family. http://togogenome.org/gene/2604047:PDMSB3_RS16985 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YW86 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the AzlC family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS21035 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZM38 ^@ Function|||Similarity|||Subunit ^@ Belongs to the LeuD family. LeuD type 1 subfamily.|||Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate.|||Heterodimer of LeuC and LeuD. http://togogenome.org/gene/2604047:PDMSB3_RS04405 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJ56 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the LolA family.|||Monomer.|||Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).|||Periplasm http://togogenome.org/gene/2604047:PDMSB3_RS25845 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZTC8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS05885 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YST5 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the KdpC family.|||Cell membrane|||Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex.|||The system is composed of three essential subunits: KdpA, KdpB and KdpC. http://togogenome.org/gene/2604047:PDMSB3_RS23270 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJV5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS06115 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YSU0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the complex I subunit 4 family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS17425 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWA2 ^@ Similarity ^@ Belongs to the Glu/Leu/Phe/Val dehydrogenases family. http://togogenome.org/gene/2604047:PDMSB3_RS22460 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIH5 ^@ Similarity ^@ Belongs to the acyl-CoA dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS05830 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1U2 ^@ Similarity ^@ Belongs to the GARS family. http://togogenome.org/gene/2604047:PDMSB3_RS12090 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZD28 ^@ Function|||Similarity ^@ Belongs to the HAD-like hydrolase superfamily. S-2-haloalkanoic acid dehalogenase family.|||Catalyzes the hydrolytic dehalogenation of small (S)-2-haloalkanoic acids to yield the corresponding (R)-2-hydroxyalkanoic acids. http://togogenome.org/gene/2604047:PDMSB3_RS23230 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAY9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS15915 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2F9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the fimbrial export usher family.|||Cell outer membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS11090 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAJ5 ^@ Function|||Similarity|||Subunit ^@ Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.|||Catalyzes the hydrolysis of 5-hydroxyisourate (HIU) to 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU).|||Homotetramer. http://togogenome.org/gene/2604047:PDMSB3_RS17185 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZF64 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS15490 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEJ8 ^@ Function|||PTM|||Similarity|||Subcellular Location Annotation ^@ 4'-phosphopantetheine is transferred from CoA to a specific serine of apo-ACP by AcpS. This modification is essential for activity because fatty acids are bound in thioester linkage to the sulfhydryl of the prosthetic group.|||Belongs to the acyl carrier protein (ACP) family.|||Carrier of the growing fatty acid chain in fatty acid biosynthesis.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS24570 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBG6 ^@ Similarity ^@ Belongs to the hyi family. http://togogenome.org/gene/2604047:PDMSB3_RS21600 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZI39 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS31980 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZE68 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS11350 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAM0 ^@ Function|||Similarity ^@ Belongs to the ATPase gamma chain family.|||Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. http://togogenome.org/gene/2604047:PDMSB3_RS00920 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z9V7 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS27820 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YXU4 ^@ Similarity ^@ Belongs to the NifZ family. http://togogenome.org/gene/2604047:PDMSB3_RS06985 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZK98 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS00195 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z5K0 ^@ Similarity ^@ Belongs to the UxaA family. http://togogenome.org/gene/2604047:PDMSB3_RS13760 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2B4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the purine-cytosine permease (2.A.39) family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS35550 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPV9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS25975 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZP82 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the cytochrome ubiquinol oxidase subunit 2 family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS11275 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDT5 ^@ Similarity ^@ Belongs to the carbohydrate kinase PfkB family. http://togogenome.org/gene/2604047:PDMSB3_RS20900 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJ19 ^@ Similarity ^@ Belongs to the bacterial secretin family. http://togogenome.org/gene/2604047:PDMSB3_RS09120 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z6I8 ^@ Function|||Similarity ^@ Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity.|||Belongs to the AhpD family. http://togogenome.org/gene/2604047:PDMSB3_RS32730 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YYH0 ^@ Similarity ^@ Belongs to the leucine-binding protein family. http://togogenome.org/gene/2604047:PDMSB3_RS16240 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YW55 ^@ Similarity ^@ Belongs to the peptidase S58 family. http://togogenome.org/gene/2604047:PDMSB3_RS22920 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJZ3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ExbD/TolR family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS13745 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDT1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS18245 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPR0 ^@ Domain|||Function|||Miscellaneous|||Similarity|||Subunit ^@ Belongs to the glutamyl-tRNA reductase family.|||Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).|||During catalysis, the active site Cys acts as a nucleophile attacking the alpha-carbonyl group of tRNA-bound glutamate with the formation of a thioester intermediate between enzyme and glutamate, and the concomitant release of tRNA(Glu). The thioester intermediate is finally reduced by direct hydride transfer from NADPH, to form the product GSA.|||Homodimer.|||Possesses an unusual extended V-shaped dimeric structure with each monomer consisting of three distinct domains arranged along a curved 'spinal' alpha-helix. The N-terminal catalytic domain specifically recognizes the glutamate moiety of the substrate. The second domain is the NADPH-binding domain, and the third C-terminal domain is responsible for dimerization. http://togogenome.org/gene/2604047:PDMSB3_RS21910 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZI92 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS09025 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z6I3 ^@ Function|||Similarity|||Subunit ^@ Belongs to the prokaryotic Ku family.|||Homodimer. Interacts with LigD.|||With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. http://togogenome.org/gene/2604047:PDMSB3_RS22695 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJM6 ^@ Function ^@ Translation factor necessary for the incorporation of selenocysteine into proteins. It probably replaces EF-Tu for the insertion of selenocysteine directed by the UGA codon. SelB binds GTP and GDP. http://togogenome.org/gene/2604047:PDMSB3_RS27325 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZLV5 ^@ Function|||Similarity ^@ Belongs to the SsuD family.|||Catalyzes the desulfonation of aliphatic sulfonates. http://togogenome.org/gene/2604047:PDMSB3_RS29700 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIZ0 ^@ Similarity ^@ Belongs to the ABC transporter superfamily. http://togogenome.org/gene/2604047:PDMSB3_RS24295 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKJ4 ^@ Cofactor|||Similarity ^@ Belongs to the DNA repair enzymes AP/ExoA family.|||Probably binds two magnesium or manganese ions per subunit. http://togogenome.org/gene/2604047:PDMSB3_RS29790 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZLM1 ^@ Subcellular Location Annotation ^@ Cell inner membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS05240 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8F2 ^@ Similarity ^@ Belongs to the ABC transporter superfamily. http://togogenome.org/gene/2604047:PDMSB3_RS18385 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2L1 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TatC family.|||Cell membrane|||Membrane|||Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.|||The Tat system comprises two distinct complexes: a TatABC complex, containing multiple copies of TatA, TatB and TatC subunits, and a separate TatA complex, containing only TatA subunits. Substrates initially bind to the TatABC complex, which probably triggers association of the separate TatA complex to form the active translocon. http://togogenome.org/gene/2604047:PDMSB3_RS30250 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJ68 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS25070 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJQ0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS18260 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZD61 ^@ Similarity ^@ Belongs to the glutaredoxin family. Monothiol subfamily. http://togogenome.org/gene/2604047:PDMSB3_RS24860 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGU8 ^@ Similarity ^@ Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.|||Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. http://togogenome.org/gene/2604047:PDMSB3_RS29155 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZMF1 ^@ Function|||Similarity ^@ Belongs to the sigma-54 factor family.|||Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. http://togogenome.org/gene/2604047:PDMSB3_RS15780 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YU34 ^@ Similarity ^@ Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.|||Belongs to the peroxiredoxin family. Prx6 subfamily. http://togogenome.org/gene/2604047:PDMSB3_RS25455 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJU6 ^@ Similarity ^@ Belongs to the aldehyde dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS27220 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z398 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS20890 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2W1 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS23730 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKA9 ^@ Caution|||Function|||Similarity ^@ Belongs to the globin family.|||In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.|||Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS16320 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z7Y7 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS12890 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVR8 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the HAK/KUP transporter (TC 2.A.72) family.|||Cell membrane|||Membrane|||Transport of potassium into the cell. Likely operates as a K(+):H(+) symporter. http://togogenome.org/gene/2604047:PDMSB3_RS01480 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZA28 ^@ Caution|||Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ A monovalent cation. Ammonium or potassium.|||Belongs to the type III pantothenate kinase family.|||Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.|||Cytoplasm|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS02610 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YSI9 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the queuine tRNA-ribosyltransferase family.|||Binds 1 zinc ion per subunit.|||Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine).|||Homodimer. Within each dimer, one monomer is responsible for RNA recognition and catalysis, while the other monomer binds to the replacement base PreQ1. http://togogenome.org/gene/2604047:PDMSB3_RS35545 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZQ82 ^@ Similarity ^@ Belongs to the bacterial solute-binding protein 3 family. http://togogenome.org/gene/2604047:PDMSB3_RS03070 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z9A7 ^@ Similarity ^@ Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS15745 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZC94 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS32700 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZP62 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS28690 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YW79 ^@ Subcellular Location Annotation ^@ Periplasm http://togogenome.org/gene/2604047:PDMSB3_RS26365 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YXM3 ^@ Similarity ^@ Belongs to the YjdM family. http://togogenome.org/gene/2604047:PDMSB3_RS32205 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZP08 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS16950 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUA8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the PurK/PurT family.|||Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).|||Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)- to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS26830 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z390 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the Cob(I)alamin adenosyltransferase family.|||Cytoplasm|||Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids. http://togogenome.org/gene/2604047:PDMSB3_RS21410 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJ95 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS01755 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCN4 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the COX11/CtaG family.|||Cell inner membrane|||Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I. http://togogenome.org/gene/2604047:PDMSB3_RS03010 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z5T2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ElaB/YgaM/YqjD family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS11835 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZE72 ^@ Function|||Similarity ^@ Belongs to the pyruvate, phosphate/water dikinase regulatory protein family. PSRP subfamily.|||Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation. http://togogenome.org/gene/2604047:PDMSB3_RS00695 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8I8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the 'phage' integrase family. XerC subfamily.|||Cytoplasm|||Forms a cyclic heterotetrameric complex composed of two molecules of XerC and two molecules of XerD.|||Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC-XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. http://togogenome.org/gene/2604047:PDMSB3_RS33055 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YYI4 ^@ Similarity ^@ Belongs to the aldehyde dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS30175 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZUU1 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TRAP transporter large permease family.|||Cell inner membrane|||Membrane|||Part of the tripartite ATP-independent periplasmic (TRAP) transport system.|||The complex comprises the extracytoplasmic solute receptor protein and the two transmembrane proteins. http://togogenome.org/gene/2604047:PDMSB3_RS32445 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZVH8 ^@ Function|||Similarity ^@ Belongs to the cytidine and deoxycytidylate deaminase family.|||This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis. http://togogenome.org/gene/2604047:PDMSB3_RS17880 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJG6 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS35405 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZQ62 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS21100 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZHV2 ^@ Caution|||Cofactor|||Function|||Similarity ^@ Binds 1 Mg(2+) ion per subunit.|||Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.|||In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS08115 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z6D6 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS35575 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YYT6 ^@ Similarity ^@ Belongs to the DapA family. http://togogenome.org/gene/2604047:PDMSB3_RS18760 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPX3 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL15 family.|||Binds to the 23S rRNA.|||Part of the 50S ribosomal subunit. http://togogenome.org/gene/2604047:PDMSB3_RS11110 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDY4 ^@ Function|||Similarity|||Subunit ^@ Belongs to the ureidoglycolate lyase family.|||Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source.|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS21125 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIY1 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS22000 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YX43 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS01205 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z9Z6 ^@ Similarity ^@ Belongs to the N-acylglucosamine 2-epimerase family. http://togogenome.org/gene/2604047:PDMSB3_RS01860 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z258 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the cytochrome ubiquinol oxidase subunit 1 family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS09055 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YT37 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the UPF0014 family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS27285 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZLL8 ^@ Similarity ^@ Belongs to the NtaA/SnaA/DszA monooxygenase family. http://togogenome.org/gene/2604047:PDMSB3_RS23795 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZB67 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the bacterial solute-binding protein SsuA/TauA family.|||Periplasm http://togogenome.org/gene/2604047:PDMSB3_RS20975 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YX00 ^@ Similarity ^@ Belongs to the citrate synthase family. http://togogenome.org/gene/2604047:PDMSB3_RS11205 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z258 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the cytochrome ubiquinol oxidase subunit 1 family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS14785 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFF1 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the thiolase-like superfamily. FabH family.|||Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids.|||Cytoplasm|||Homodimer.|||The last Arg residue of the ACP-binding site is essential for the weak association between ACP/AcpP and FabH. http://togogenome.org/gene/2604047:PDMSB3_RS23140 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIR8 ^@ Similarity ^@ Belongs to the pterin-4-alpha-carbinolamine dehydratase family. http://togogenome.org/gene/2604047:PDMSB3_RS15975 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YU47 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS23835 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZK40 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS20065 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDV8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the bacterial secretin family. GSP D subfamily.|||Cell outer membrane http://togogenome.org/gene/2604047:PDMSB3_RS17045 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUB3 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the succinate/malate CoA ligase alpha subunit family.|||Heterotetramer of two alpha and two beta subunits.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. http://togogenome.org/gene/2604047:PDMSB3_RS19535 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZK82 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the type III secretion exporter family.|||Cell membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane|||Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin. http://togogenome.org/gene/2604047:PDMSB3_RS15075 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YTY3 ^@ Function|||Similarity ^@ Belongs to the bacterial ribosomal protein bL19 family.|||This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. http://togogenome.org/gene/2604047:PDMSB3_RS33560 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZS23 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS17870 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGP9 ^@ Similarity ^@ Belongs to the FPP/GGPP synthase family. http://togogenome.org/gene/2604047:PDMSB3_RS21390 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YX18 ^@ Similarity ^@ Belongs to the FMN-dependent alpha-hydroxy acid dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS12105 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z277 ^@ Function|||Similarity|||Subunit ^@ Belongs to the class II aldolase/RraA-like family.|||Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2-oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions.|||Homotrimer. http://togogenome.org/gene/2604047:PDMSB3_RS34165 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YYM9 ^@ Similarity ^@ Belongs to the class-I aminoacyl-tRNA synthetase family. http://togogenome.org/gene/2604047:PDMSB3_RS29400 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZUI3 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS14805 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNJ2 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the Maf family. YceF subfamily.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Nucleoside triphosphate pyrophosphatase that hydrolyzes 7-methyl-GTP (m(7)GTP). May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. http://togogenome.org/gene/2604047:PDMSB3_RS11540 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCT7 ^@ Similarity ^@ Belongs to the universal stress protein A family. http://togogenome.org/gene/2604047:PDMSB3_RS32840 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZP75 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS06065 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YST9 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I 30 kDa subunit family.|||Cell membrane|||NDH-1 is composed of 14 different subunits. Subunits NuoB, C, D, E, F, and G constitute the peripheral sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/2604047:PDMSB3_RS34640 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZW11 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS13235 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2A2 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family.|||Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS09740 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZC09 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the MgtC/SapB family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS32340 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNQ3 ^@ Similarity ^@ Belongs to the bacterial histone-like protein family. http://togogenome.org/gene/2604047:PDMSB3_RS15720 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIJ3 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS05890 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBT6 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS26755 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZC97 ^@ Similarity ^@ Belongs to the sigma-70 factor family. ECF subfamily. http://togogenome.org/gene/2604047:PDMSB3_RS07645 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEY2 ^@ Similarity ^@ Belongs to the prokaryotic/mitochondrial release factor family. http://togogenome.org/gene/2604047:PDMSB3_RS32910 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZVL9 ^@ Similarity ^@ Belongs to the iron/ascorbate-dependent oxidoreductase family. http://togogenome.org/gene/2604047:PDMSB3_RS33915 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZP92 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS05810 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJT5 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the RNA methyltransferase RlmH family.|||Cytoplasm|||Homodimer.|||Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA. http://togogenome.org/gene/2604047:PDMSB3_RS04475 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDN4 ^@ Function|||Similarity|||Subunit ^@ Belongs to the MinC family.|||Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization.|||Interacts with MinD and FtsZ. http://togogenome.org/gene/2604047:PDMSB3_RS02605 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1L4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the YajC family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS18655 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8L0 ^@ Similarity|||Subcellular Location Annotation ^@ Cell inner membrane|||In the C-terminal section; belongs to the transpeptidase family.|||In the N-terminal section; belongs to the glycosyltransferase 51 family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS06105 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8T0 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I subunit 4L family.|||Cell membrane|||Membrane|||NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/2604047:PDMSB3_RS05470 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1T4 ^@ Similarity ^@ In the C-terminal section; belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. http://togogenome.org/gene/2604047:PDMSB3_RS13425 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZHM9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the TMEM175 family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS35655 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFL5 ^@ Function|||Similarity ^@ Belongs to the DapA family.|||Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). http://togogenome.org/gene/2604047:PDMSB3_RS18905 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPZ1 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL10 family.|||Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.|||Part of the ribosomal stalk of the 50S ribosomal subunit. The N-terminus interacts with L11 and the large rRNA to form the base of the stalk. The C-terminus forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex. http://togogenome.org/gene/2604047:PDMSB3_RS17895 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFG9 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the peptidase A24 family.|||Cell inner membrane|||Cell membrane|||Membrane|||Plays an essential role in type IV pili and type II pseudopili formation by proteolytically removing the leader sequence from substrate proteins and subsequently monomethylating the alpha-amino group of the newly exposed N-terminal phenylalanine. http://togogenome.org/gene/2604047:PDMSB3_RS10455 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAB6 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS12225 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZH33 ^@ Cofactor|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-I aminoacyl-tRNA synthetase family.|||Binds 1 zinc ion per subunit.|||Cytoplasm|||Monomer. http://togogenome.org/gene/2604047:PDMSB3_RS21745 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2Y0 ^@ Similarity ^@ Belongs to the acyl-CoA dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS09420 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVC0 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the YciB family.|||Cell inner membrane|||Plays a role in cell envelope biogenesis, maintenance of cell envelope integrity and membrane homeostasis. http://togogenome.org/gene/2604047:PDMSB3_RS07180 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKC5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS35675 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZLH0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the EamA transporter family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS07740 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YV56 ^@ Similarity ^@ Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. http://togogenome.org/gene/2604047:PDMSB3_RS15180 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZID2 ^@ Cofactor|||Domain|||Function|||Similarity|||Subunit ^@ Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily.|||Binds 1 NADP(+) per subunit.|||Catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose.|||Contains a large N-terminal NADP-binding domain, and a smaller C-terminal substrate-binding domain.|||Homopentamer. http://togogenome.org/gene/2604047:PDMSB3_RS24595 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKP5 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS15025 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2E0 ^@ Function|||Similarity ^@ Belongs to the dihydrofolate reductase family.|||Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis. http://togogenome.org/gene/2604047:PDMSB3_RS17625 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGL5 ^@ Caution|||Function|||Miscellaneous|||Similarity ^@ Belongs to the thiamine-monophosphate kinase family.|||Catalyzes the ATP-dependent phosphorylation of thiamine-monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Reaction mechanism of ThiL seems to utilize a direct, inline transfer of the gamma-phosphate of ATP to TMP rather than a phosphorylated enzyme intermediate. http://togogenome.org/gene/2604047:PDMSB3_RS22535 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJK7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the sigma-70 factor family. RpoD/SigA subfamily.|||Cytoplasm|||Interacts transiently with the RNA polymerase catalytic core.|||Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. http://togogenome.org/gene/2604047:PDMSB3_RS27655 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCK4 ^@ Similarity ^@ Belongs to the isocitrate and isopropylmalate dehydrogenases family. http://togogenome.org/gene/2604047:PDMSB3_RS06100 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUZ4 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the complex I subunit 6 family.|||Cell membrane|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/2604047:PDMSB3_RS11080 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCM4 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS01080 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8N4 ^@ Caution|||Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily.|||Binds 1 FMN per subunit.|||Catalyzes the conversion of dihydroorotate to orotate.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS19565 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2N5 ^@ Function|||Similarity ^@ Belongs to the CheD family.|||Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis. http://togogenome.org/gene/2604047:PDMSB3_RS02070 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8Z3 ^@ Caution|||Function|||Subunit ^@ Homotetramer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. http://togogenome.org/gene/2604047:PDMSB3_RS30915 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJG1 ^@ Function|||Similarity|||Subunit ^@ Belongs to the type-II 3-dehydroquinase family.|||Catalyzes a trans-dehydration via an enolate intermediate.|||Homododecamer. http://togogenome.org/gene/2604047:PDMSB3_RS17415 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPF9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS08955 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YT34 ^@ Similarity ^@ Belongs to the pseudouridine synthase RluA family. http://togogenome.org/gene/2604047:PDMSB3_RS13350 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVT7 ^@ Miscellaneous|||Similarity|||Subcellular Location Annotation ^@ Belongs to the acetyltransferase family. ArgA subfamily.|||Cytoplasm|||In bacteria which possess the bifunctional enzyme ornithine acetyltransferase/N-acetylglutamate synthase (ArgJ), ArgA fulfills an anaplerotic role. http://togogenome.org/gene/2604047:PDMSB3_RS34665 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWY7 ^@ Similarity ^@ Belongs to the manganese catalase family. http://togogenome.org/gene/2604047:PDMSB3_RS18910 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWG4 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL1 family.|||Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.|||Part of the 50S ribosomal subunit.|||Protein L1 is also a translational repressor protein, it controls the translation of the L11 operon by binding to its mRNA. http://togogenome.org/gene/2604047:PDMSB3_RS24245 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVN1 ^@ Function|||Similarity|||Subunit ^@ Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily.|||Homodimer.|||Involved in phosphonate degradation. http://togogenome.org/gene/2604047:PDMSB3_RS24300 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKA7 ^@ Similarity ^@ Belongs to the UPF0337 (CsbD) family. http://togogenome.org/gene/2604047:PDMSB3_RS04265 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z5W9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS00110 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z5J8 ^@ Similarity ^@ Belongs to the IS21/IS1162 putative ATP-binding protein family. http://togogenome.org/gene/2604047:PDMSB3_RS20295 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUS6 ^@ Function|||Similarity|||Subunit ^@ Belongs to the RnpA family.|||Consists of a catalytic RNA component (M1 or rnpB) and a protein subunit.|||RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. http://togogenome.org/gene/2604047:PDMSB3_RS21325 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZA84 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the XseB family.|||Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.|||Cytoplasm|||Heterooligomer composed of large and small subunits. http://togogenome.org/gene/2604047:PDMSB3_RS16425 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEW7 ^@ Function|||Similarity ^@ Belongs to the ClpA/ClpB family.|||Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE. Acts before DnaK, in the processing of protein aggregates. Protein binding stimulates the ATPase activity; ATP hydrolysis unfolds the denatured protein aggregates, which probably helps expose new hydrophobic binding sites on the surface of ClpB-bound aggregates, contributing to the solubilization and refolding of denatured protein aggregates by DnaK. http://togogenome.org/gene/2604047:PDMSB3_RS07120 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZC57 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the pyridoxine kinase family. PdxY subfamily.|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP. http://togogenome.org/gene/2604047:PDMSB3_RS14465 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVY4 ^@ Function|||PTM|||Similarity ^@ An intermediate of this reaction is the autophosphorylated ppk in which a phosphate is covalently linked to a histidine residue through a N-P bond.|||Belongs to the polyphosphate kinase 1 (PPK1) family.|||Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). http://togogenome.org/gene/2604047:PDMSB3_RS06675 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YSV6 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS13100 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YTK7 ^@ Similarity ^@ Belongs to the RecJ family. http://togogenome.org/gene/2604047:PDMSB3_RS16605 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEZ0 ^@ Caution|||Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the adenylate kinase family.|||Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism.|||Consists of three domains, a large central CORE domain and two small peripheral domains, NMPbind and LID, which undergo movements during catalysis. The LID domain closes over the site of phosphoryl transfer upon ATP binding. Assembling and dissambling the active center during each catalytic cycle provides an effective means to prevent ATP hydrolysis.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer. http://togogenome.org/gene/2604047:PDMSB3_RS34090 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPM8 ^@ Similarity ^@ Belongs to the bacterial solute-binding protein 1 family. http://togogenome.org/gene/2604047:PDMSB3_RS09925 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZLH1 ^@ Similarity ^@ Belongs to the NtaA/SnaA/DszA monooxygenase family. http://togogenome.org/gene/2604047:PDMSB3_RS17430 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCV7 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS13960 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBL1 ^@ Similarity ^@ Belongs to the enoyl-CoA hydratase/isomerase family.|||In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. http://togogenome.org/gene/2604047:PDMSB3_RS18555 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGS8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.|||Bacterial flagellum basal body|||Belongs to the FlgH family.|||Cell outer membrane|||The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod. http://togogenome.org/gene/2604047:PDMSB3_RS08200 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCK9 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.|||Belongs to the RNR ribonuclease family. RNase R subfamily.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS17885 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8D0 ^@ Similarity ^@ Belongs to the GSP E family. http://togogenome.org/gene/2604047:PDMSB3_RS26910 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPL3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the complex I subunit 4 family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS17550 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPH6 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the DapB family.|||Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate.|||Cytoplasm|||Homotetramer.|||Was originally thought to be a dihydrodipicolinate reductase (DHDPR), catalyzing the conversion of dihydrodipicolinate to tetrahydrodipicolinate. However, it was shown in E.coli that the substrate of the enzymatic reaction is not dihydrodipicolinate (DHDP) but in fact (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinic acid (HTPA), the product released by the DapA-catalyzed reaction. http://togogenome.org/gene/2604047:PDMSB3_RS01765 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZI60 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the cytochrome c oxidase subunit 3 family.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS17410 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z889 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS35520 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNZ0 ^@ Similarity ^@ Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. http://togogenome.org/gene/2604047:PDMSB3_RS17555 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFB6 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the BamE family.|||Cell outer membrane|||Part of the Bam complex.|||Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. http://togogenome.org/gene/2604047:PDMSB3_RS27470 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCI2 ^@ Similarity ^@ Belongs to the ribonuclease N1/T1 family. http://togogenome.org/gene/2604047:PDMSB3_RS02485 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCW6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the gmhB family.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS08385 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCR9 ^@ Similarity ^@ Belongs to the Nudix hydrolase family. http://togogenome.org/gene/2604047:PDMSB3_RS08335 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCQ9 ^@ Similarity ^@ Belongs to the mannose-6-phosphate isomerase type 2 family. http://togogenome.org/gene/2604047:PDMSB3_RS02185 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1K3 ^@ PTM ^@ Binds 2 heme c groups covalently per subunit. http://togogenome.org/gene/2604047:PDMSB3_RS09460 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBV9 ^@ Similarity ^@ Belongs to the thioesterase PaaI family. http://togogenome.org/gene/2604047:PDMSB3_RS23025 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJS1 ^@ Function ^@ Catalyzes the formation of 4-(hydroxymethyl)-2-furancarboxaldehyde phosphate (4-HFC-P) from two molecules of glyceraldehyde-3-P (GA-3-P). http://togogenome.org/gene/2604047:PDMSB3_RS25230 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZH06 ^@ Similarity ^@ Belongs to the glycosyl hydrolase 8 (cellulase D) family. http://togogenome.org/gene/2604047:PDMSB3_RS15295 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNQ8 ^@ Similarity ^@ Belongs to the complex I 51 kDa subunit family. http://togogenome.org/gene/2604047:PDMSB3_RS24000 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGE9 ^@ Similarity ^@ Belongs to the tannase family. http://togogenome.org/gene/2604047:PDMSB3_RS25485 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNY8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the KdpC family.|||Cell membrane|||Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex.|||The system is composed of three essential subunits: KdpA, KdpB and KdpC. http://togogenome.org/gene/2604047:PDMSB3_RS12170 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YTF7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS06430 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z659 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the exbB/tolQ family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS11585 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZM64 ^@ PTM ^@ Binds 1 heme c group covalently per subunit. http://togogenome.org/gene/2604047:PDMSB3_RS28235 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZU35 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS33470 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZVR5 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS28380 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCU8 ^@ Similarity ^@ Belongs to the XFP family. http://togogenome.org/gene/2604047:PDMSB3_RS10515 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YT93 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the KduI family.|||Binds 1 zinc ion per subunit.|||Catalyzes the isomerization of 5-dehydro-4-deoxy-D-glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. http://togogenome.org/gene/2604047:PDMSB3_RS19270 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZG14 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS19900 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZQC2 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Specifically methylates the N7 position of guanine in position 527 of 16S rRNA. http://togogenome.org/gene/2604047:PDMSB3_RS06730 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZC37 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS16345 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2G8 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bL28 family. http://togogenome.org/gene/2604047:PDMSB3_RS15560 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YU18 ^@ Function ^@ Catalyzes the Claisen rearrangement of chorismate to prephenate. http://togogenome.org/gene/2604047:PDMSB3_RS00570 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z9R7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the MreD family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS20115 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDW4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the GSP M family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS00670 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z9S9 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ A double ring-shaped homohexamer of HslV is capped on each side by a ring-shaped HslU homohexamer. The assembly of the HslU/HslV complex is dependent on binding of ATP.|||ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.|||Belongs to the ClpX chaperone family. HslU subfamily.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS06360 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YSU7 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. http://togogenome.org/gene/2604047:PDMSB3_RS21750 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVC1 ^@ Similarity ^@ Belongs to the enoyl-CoA hydratase/isomerase family. http://togogenome.org/gene/2604047:PDMSB3_RS02655 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1L5 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the pyrroline-5-carboxylate reductase family.|||Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS23615 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJ28 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS22485 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJT2 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS29825 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDD7 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS17595 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8A5 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the spermidine/spermine synthase family.|||Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.|||Homodimer or homotetramer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS02270 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z7J0 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the GTP cyclohydrolase I family. QueF type 2 subfamily.|||Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).|||Cytoplasm|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS30520 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNB6 ^@ Similarity ^@ Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. http://togogenome.org/gene/2604047:PDMSB3_RS18215 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWD4 ^@ Caution|||Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ A translation factor that gates the progression of the 70S ribosomal initiation complex (IC, containing tRNA(fMet) in the P-site) into the translation elongation cycle by using a mechanism sensitive to the ATP/ADP ratio. Binds to the 70S ribosome E-site where it modulates the state of the translating ribosome during subunit translocation. ATP hydrolysis probably frees it from the ribosome, which can enter the elongation phase.|||Belongs to the ABC transporter superfamily. ABCF family. Translational throttle EttA subfamily.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer. Probably contacts ribosomal proteins L1, L5, L33 and S7, the 16S and 23S rRNA and the P-site containing tRNA(fMet).|||The P-site tRNA interaction motif (PtIM domain) probably interacts with the P-site tRNA(fMet) as well as the 23S rRNA.|||The arm domain is inserted in the first ABC transporter domain. Probably contacts ribosomal protein L1. http://togogenome.org/gene/2604047:PDMSB3_RS09470 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z9Z0 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. http://togogenome.org/gene/2604047:PDMSB3_RS17775 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGE5 ^@ Similarity ^@ Belongs to the carbohydrate kinase PfkB family. http://togogenome.org/gene/2604047:PDMSB3_RS06170 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z650 ^@ Similarity ^@ Belongs to the acyl-CoA dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS27920 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKV9 ^@ Function ^@ Could be a 3Fe-4S cluster-containing protein. http://togogenome.org/gene/2604047:PDMSB3_RS25475 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZL19 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the KdpA family.|||Cell membrane|||Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds the extracellular potassium ions and delivers the ions to the membrane domain of KdpB through an intramembrane tunnel.|||The system is composed of three essential subunits: KdpA, KdpB and KdpC. http://togogenome.org/gene/2604047:PDMSB3_RS16880 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z841 ^@ Similarity ^@ Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. http://togogenome.org/gene/2604047:PDMSB3_RS05985 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBS1 ^@ Caution|||Cofactor|||Function|||Similarity ^@ Belongs to the ketol-acid reductoisomerase family.|||Binds 2 magnesium ions per subunit.|||Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS19775 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDS0 ^@ Function|||Similarity|||Subunit ^@ Belongs to the GcvT family.|||The glycine cleavage system catalyzes the degradation of glycine.|||The glycine cleavage system is composed of four proteins: P, T, L and H. http://togogenome.org/gene/2604047:PDMSB3_RS15535 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEK3 ^@ Caution|||Cofactor|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the FBPase class 1 family.|||Binds 2 magnesium ions per subunit.|||Cytoplasm|||Homotetramer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS15990 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIM4 ^@ Function|||Similarity ^@ Belongs to the NusB family.|||Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. http://togogenome.org/gene/2604047:PDMSB3_RS21540 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAB3 ^@ Similarity ^@ Belongs to the intradiol ring-cleavage dioxygenase family. http://togogenome.org/gene/2604047:PDMSB3_RS05750 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YST1 ^@ Similarity ^@ Belongs to the peptidase C40 family. http://togogenome.org/gene/2604047:PDMSB3_RS11395 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVK5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the amino acid-polyamine-organocation (APC) superfamily. Basic amino acid/polyamine antiporter (APA) (TC 2.A.3.2) family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS11955 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVM8 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the ZipA family.|||Cell inner membrane|||Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. http://togogenome.org/gene/2604047:PDMSB3_RS18725 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2L8 ^@ Domain|||Function|||Similarity|||Subunit ^@ Belongs to the RNA polymerase alpha chain family.|||DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.|||Homodimer. The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.|||The N-terminal domain is essential for RNAP assembly and basal transcription, whereas the C-terminal domain is involved in interaction with transcriptional regulators and with upstream promoter elements. http://togogenome.org/gene/2604047:PDMSB3_RS15615 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFR4 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the guanylate kinase family.|||Cytoplasm|||Essential for recycling GMP and indirectly, cGMP. http://togogenome.org/gene/2604047:PDMSB3_RS02720 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAH1 ^@ Function|||Similarity ^@ Belongs to the RecN family.|||May be involved in recombinational repair of damaged DNA. http://togogenome.org/gene/2604047:PDMSB3_RS24555 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKN8 ^@ Similarity ^@ Belongs to the four-carbon acid sugar kinase family. http://togogenome.org/gene/2604047:PDMSB3_RS11785 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z270 ^@ Function|||Subunit ^@ Catalyzes the synthesis of GMP from XMP.|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS21865 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YX39 ^@ Similarity ^@ Belongs to the RutC family. http://togogenome.org/gene/2604047:PDMSB3_RS19855 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZQB6 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ATPase gamma chain family.|||Cell membrane|||F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.|||Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. http://togogenome.org/gene/2604047:PDMSB3_RS13135 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVS8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the HscB family.|||Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA.|||Interacts with HscA and stimulates its ATPase activity. http://togogenome.org/gene/2604047:PDMSB3_RS28780 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZD04 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the LysR transcriptional regulatory family.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS28475 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZU51 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS28995 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YY12 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the fatty acid desaturase type 1 family. AlkB subfamily.|||Cell inner membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS03565 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDA4 ^@ Function|||Similarity ^@ Belongs to the glucose-1-phosphate thymidylyltransferase family.|||Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. http://togogenome.org/gene/2604047:PDMSB3_RS06825 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YSW0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS17785 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8C2 ^@ Function|||Similarity ^@ Belongs to the histone H1/H5 family. HCT subfamily.|||Might have a role in establishing the nucleoid structure of elementary bodies. http://togogenome.org/gene/2604047:PDMSB3_RS16350 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YU72 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bL33 family. http://togogenome.org/gene/2604047:PDMSB3_RS21345 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFC2 ^@ Caution|||Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the KAE1 / TsaD family.|||Binds 1 Fe(2+) ion per subunit.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction. http://togogenome.org/gene/2604047:PDMSB3_RS04375 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1Q8 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS19850 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8Z9 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the ATPase alpha/beta chains family.|||Cell membrane|||Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. http://togogenome.org/gene/2604047:PDMSB3_RS18100 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8F0 ^@ Function|||Similarity ^@ Belongs to the phenylacetyl-CoA ligase family.|||Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). http://togogenome.org/gene/2604047:PDMSB3_RS15220 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFL4 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the EPSP synthase family.|||Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer. http://togogenome.org/gene/2604047:PDMSB3_RS08100 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCM6 ^@ Similarity ^@ Belongs to the NtaA/SnaA/DszA monooxygenase family. http://togogenome.org/gene/2604047:PDMSB3_RS23165 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZK29 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS18465 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8I9 ^@ Similarity ^@ Belongs to the BolA/IbaG family. http://togogenome.org/gene/2604047:PDMSB3_RS14520 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2D0 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family.|||Cytoplasm|||Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. http://togogenome.org/gene/2604047:PDMSB3_RS34585 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZSG9 ^@ Similarity ^@ Belongs to the spermidine/spermine synthase family. http://togogenome.org/gene/2604047:PDMSB3_RS00240 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z5K1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS05230 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZA29 ^@ Similarity ^@ Belongs to the P(II) protein family. http://togogenome.org/gene/2604047:PDMSB3_RS14515 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBU0 ^@ Caution|||Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins.|||Belongs to the AAA ATPase family.|||Binds 1 zinc ion per subunit.|||Cell membrane|||Homohexamer.|||In the C-terminal section; belongs to the peptidase M41 family.|||In the central section; belongs to the AAA ATPase family.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS05995 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z641 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the CDP-alcohol phosphatidyltransferase class-I family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS28075 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZM72 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS14865 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YW00 ^@ Function|||Similarity ^@ Belongs to the RmuC family.|||Involved in DNA recombination. http://togogenome.org/gene/2604047:PDMSB3_RS08865 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCY6 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the Rho family.|||Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template.|||Homohexamer. The homohexamer assembles into an open ring structure.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS10275 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDL0 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS04480 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z5X6 ^@ Function|||Similarity|||Subunit ^@ ATPase required for the correct placement of the division site. Cell division inhibitors MinC and MinD act in concert to form an inhibitor capable of blocking formation of the polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings.|||Belongs to the ParA family. MinD subfamily.|||Interacts with MinC and FtsZ. http://togogenome.org/gene/2604047:PDMSB3_RS27880 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZI17 ^@ Similarity ^@ Belongs to the HesB/IscA family. http://togogenome.org/gene/2604047:PDMSB3_RS13530 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDP7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TRAP transporter small permease family.|||Cell inner membrane|||Membrane|||Part of the tripartite ATP-independent periplasmic (TRAP) transport system.|||The complex comprises the extracytoplasmic solute receptor protein and the two transmembrane proteins. http://togogenome.org/gene/2604047:PDMSB3_RS33900 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z3S2 ^@ Function ^@ Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate. http://togogenome.org/gene/2604047:PDMSB3_RS19440 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZQ58 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)-dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility.|||Bacterial flagellum basal body|||Belongs to the YcgR family.|||Monomer. Interacts with the flagellar basal bodies. http://togogenome.org/gene/2604047:PDMSB3_RS28100 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKY8 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS09020 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFM0 ^@ Similarity ^@ Belongs to the cytochrome P450 family. http://togogenome.org/gene/2604047:PDMSB3_RS15980 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFW6 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the DHBP synthase family.|||Binds 2 divalent metal cations per subunit. Magnesium or manganese.|||Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.|||Homodimer.|||In the C-terminal section; belongs to the GTP cyclohydrolase II family.|||In the N-terminal section; belongs to the DHBP synthase family. http://togogenome.org/gene/2604047:PDMSB3_RS01930 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1J7 ^@ Function|||Similarity|||Subunit ^@ Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.|||Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA. Binds to the 5S rRNA independently of L5 and L18.|||This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. http://togogenome.org/gene/2604047:PDMSB3_RS16255 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YU66 ^@ Similarity ^@ Belongs to the bacterial solute-binding protein 5 family. http://togogenome.org/gene/2604047:PDMSB3_RS05480 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBN1 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the heat shock protein 90 family.|||Cytoplasm|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Molecular chaperone. Has ATPase activity. http://togogenome.org/gene/2604047:PDMSB3_RS13410 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YTM6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS12915 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEF8 ^@ Function|||Similarity ^@ Belongs to the band 7/mec-2 family. HflC subfamily.|||HflC and HflK could regulate a protease. http://togogenome.org/gene/2604047:PDMSB3_RS05435 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBM5 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS27160 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZTT4 ^@ Function|||Similarity ^@ Belongs to the PurU family.|||Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). http://togogenome.org/gene/2604047:PDMSB3_RS23440 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZG70 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS24140 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGG8 ^@ Similarity ^@ Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS28975 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZQC6 ^@ Function|||Similarity|||Subunit ^@ Belongs to the ACC deaminase/D-cysteine desulfhydrase family.|||Catalyzes a cyclopropane ring-opening reaction, the irreversible conversion of 1-aminocyclopropane-1-carboxylate (ACC) to ammonia and alpha-ketobutyrate. Allows growth on ACC as a nitrogen source.|||Homotrimer. http://togogenome.org/gene/2604047:PDMSB3_RS00855 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1G9 ^@ Similarity ^@ Belongs to the ferredoxin--NADP reductase type 1 family. http://togogenome.org/gene/2604047:PDMSB3_RS13210 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZHI9 ^@ Function ^@ Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). http://togogenome.org/gene/2604047:PDMSB3_RS05535 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBL0 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the transaldolase family. Type 1 subfamily.|||Cytoplasm|||Homodimer.|||Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. http://togogenome.org/gene/2604047:PDMSB3_RS17330 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YW98 ^@ Caution|||Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the RuvA family.|||Cytoplasm|||Has three domains with a flexible linker between the domains II and III and assumes an 'L' shape. Domain III is highly mobile and contacts RuvB.|||Homotetramer. Forms an RuvA(8)-RuvB(12)-Holliday junction (HJ) complex. HJ DNA is sandwiched between 2 RuvA tetramers; dsDNA enters through RuvA and exits via RuvB. An RuvB hexamer assembles on each DNA strand where it exits the tetramer. Each RuvB hexamer is contacted by two RuvA subunits (via domain III) on 2 adjacent RuvB subunits; this complex drives branch migration. In the full resolvosome a probable DNA-RuvA(4)-RuvB(12)-RuvC(2) complex forms which resolves the HJ.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||The RuvA-RuvB-RuvC complex processes Holliday junction (HJ) DNA during genetic recombination and DNA repair, while the RuvA-RuvB complex plays an important role in the rescue of blocked DNA replication forks via replication fork reversal (RFR). RuvA specifically binds to HJ cruciform DNA, conferring on it an open structure. The RuvB hexamer acts as an ATP-dependent pump, pulling dsDNA into and through the RuvAB complex. HJ branch migration allows RuvC to scan DNA until it finds its consensus sequence, where it cleaves and resolves the cruciform DNA. http://togogenome.org/gene/2604047:PDMSB3_RS06875 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZC53 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS21765 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZMG0 ^@ Similarity ^@ Belongs to the ETF beta-subunit/FixA family. http://togogenome.org/gene/2604047:PDMSB3_RS14500 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z7I5 ^@ Function|||Similarity|||Subunit ^@ Belongs to the PstS family.|||Part of the ABC transporter complex PstSACB involved in phosphate import.|||The complex is composed of two ATP-binding proteins (PstB), two transmembrane proteins (PstC and PstA) and a solute-binding protein (PstS). http://togogenome.org/gene/2604047:PDMSB3_RS14915 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEC0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the AzlC family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS06060 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1U7 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I 20 kDa subunit family.|||Binds 1 [4Fe-4S] cluster.|||Cell membrane|||NDH-1 is composed of 14 different subunits. Subunits NuoB, C, D, E, F, and G constitute the peripheral sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/2604047:PDMSB3_RS06525 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z663 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the FliP/MopC/SpaP family.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS07200 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1X1 ^@ Cofactor|||Miscellaneous|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.|||Binds 1 pyridoxal phosphate per subunit.|||Cytoplasm|||Homodimer.|||May also have succinyldiaminopimelate aminotransferase activity, thus carrying out the corresponding step in lysine biosynthesis. http://togogenome.org/gene/2604047:PDMSB3_RS00620 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z9S3 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS02615 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAG1 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the QueA family.|||Cytoplasm|||Monomer.|||Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). http://togogenome.org/gene/2604047:PDMSB3_RS01745 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZA60 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the cytochrome c oxidase subunit 2 family.|||Binds a copper A center.|||Cell membrane|||Membrane|||Periplasm|||Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). http://togogenome.org/gene/2604047:PDMSB3_RS30540 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZUX7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS19515 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2N4 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the sigma-70 factor family. FliA subfamily.|||Cytoplasm|||Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes. http://togogenome.org/gene/2604047:PDMSB3_RS25240 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVS6 ^@ Function|||Subcellular Location Annotation ^@ Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose.|||Cell inner membrane http://togogenome.org/gene/2604047:PDMSB3_RS01920 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUC5 ^@ Similarity|||Subunit ^@ Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS13900 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDV2 ^@ Similarity ^@ Belongs to the methyl-accepting chemotaxis (MCP) protein family. http://togogenome.org/gene/2604047:PDMSB3_RS21155 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZF97 ^@ Function|||Similarity|||Subunit ^@ Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.|||Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.|||Monomer. http://togogenome.org/gene/2604047:PDMSB3_RS20965 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZRI6 ^@ Similarity ^@ Belongs to the PrpD family. http://togogenome.org/gene/2604047:PDMSB3_RS06650 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEJ4 ^@ Similarity ^@ Belongs to the NtaA/SnaA/DszA monooxygenase family. http://togogenome.org/gene/2604047:PDMSB3_RS05500 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJN1 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the UbiC family.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway. http://togogenome.org/gene/2604047:PDMSB3_RS17355 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZG83 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.|||Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr).|||Cytoplasm|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS35710 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZP18 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the IspH family.|||Binds 1 [4Fe-4S] cluster per subunit.|||Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. http://togogenome.org/gene/2604047:PDMSB3_RS21280 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZRN0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family.|||Belongs to the heat shock protein 70 family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS01490 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z5N9 ^@ Caution|||Similarity|||Subcellular Location Annotation ^@ Belongs to the MlaE permease family.|||Cell inner membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS27715 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKT3 ^@ Similarity ^@ Belongs to the NifX/NifY family. http://togogenome.org/gene/2604047:PDMSB3_RS02465 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1L0 ^@ Cofactor|||Similarity ^@ Belongs to the glyoxalase I family.|||Binds 1 zinc ion per subunit. In the homodimer, two zinc ions are bound between subunits. http://togogenome.org/gene/2604047:PDMSB3_RS18420 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8I4 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the HisA/HisF family.|||Cytoplasm|||Heterodimer of HisH and HisF.|||IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. http://togogenome.org/gene/2604047:PDMSB3_RS21115 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YV90 ^@ Similarity ^@ Belongs to the FKBP-type PPIase family. http://togogenome.org/gene/2604047:PDMSB3_RS01345 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z5N5 ^@ Similarity ^@ Belongs to the thiolase-like superfamily. Thiolase family. http://togogenome.org/gene/2604047:PDMSB3_RS33840 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YYL6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS12940 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVS0 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the BamB family.|||Cell outer membrane|||Part of the Bam complex.|||Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. http://togogenome.org/gene/2604047:PDMSB3_RS08975 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z6I1 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. http://togogenome.org/gene/2604047:PDMSB3_RS11920 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YTF0 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.|||Binds 2 divalent metal cations per subunit. Has a high-affinity and a low affinity metal-binding site. The true nature of the physiological cofactor is under debate. The enzyme is active with cobalt, zinc, manganese or divalent iron ions. Most likely, methionine aminopeptidases function as mononuclear Fe(2+)-metalloproteases under physiological conditions, and the catalytically relevant metal-binding site has been assigned to the histidine-containing high-affinity site.|||Monomer.|||Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed. http://togogenome.org/gene/2604047:PDMSB3_RS05630 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBM1 ^@ Function|||Similarity|||Subunit ^@ Belongs to the PurK/PurT family.|||Homodimer.|||Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate. http://togogenome.org/gene/2604047:PDMSB3_RS11210 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YTC1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the cytochrome ubiquinol oxidase subunit 2 family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS17855 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZD13 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control.|||Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.|||Cytoplasm|||Monomer. http://togogenome.org/gene/2604047:PDMSB3_RS08450 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBD0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS08690 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z6G5 ^@ Function|||Similarity ^@ Belongs to the helicase family. DnaB subfamily.|||Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. http://togogenome.org/gene/2604047:PDMSB3_RS15030 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YTX8 ^@ Similarity ^@ Belongs to the peptidase U62 family. http://togogenome.org/gene/2604047:PDMSB3_RS02405 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z934 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS18450 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGY8 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the histidinol dehydrogenase family.|||Binds 1 zinc ion per subunit.|||Catalyzes the sequential NAD-dependent oxidations of L-histidinol to L-histidinaldehyde and then to L-histidine. http://togogenome.org/gene/2604047:PDMSB3_RS24135 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YXD2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the etk/wzc family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS01235 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1H9 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS02715 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAH2 ^@ Function|||Similarity ^@ Belongs to the GlnE family.|||Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell. http://togogenome.org/gene/2604047:PDMSB3_RS11390 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCR3 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the ATPase alpha/beta chains family.|||Cell membrane|||Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. http://togogenome.org/gene/2604047:PDMSB3_RS29845 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJ09 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the rhamnose mutarotase family.|||Cytoplasm|||Homodimer.|||Involved in the anomeric conversion of L-rhamnose. http://togogenome.org/gene/2604047:PDMSB3_RS16330 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEV2 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the IspH family.|||Binds 1 [4Fe-4S] cluster per subunit.|||Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. http://togogenome.org/gene/2604047:PDMSB3_RS11655 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZE47 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS01535 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCK7 ^@ Similarity ^@ Belongs to the UPF0250 family. http://togogenome.org/gene/2604047:PDMSB3_RS19740 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2N9 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS14290 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBQ5 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS26930 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YXP8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the cytochrome c oxidase bacterial subunit 4 family.|||Cytochrome bo(3) ubiquinol terminal oxidase is the component of the aerobic respiratory chain of E.coli that predominates when cells are grown at high aeration. Has proton pump activity across the membrane in addition to electron transfer, pumping 2 protons/electron.|||Heterooctamer of two A chains, two B chains, two C chains and two D chains.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS21045 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZRK1 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the aspartate-semialdehyde dehydrogenase family.|||Catalyzes the NADPH-dependent formation of L-aspartate-semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl-4-phosphate.|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS02215 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z910 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the MIP/aquaporin (TC 1.A.8) family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS27960 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZU13 ^@ Caution|||Cofactor|||Function|||Similarity|||Subunit ^@ Also exhibits azoreductase activity. Catalyzes the reductive cleavage of the azo bond in aromatic azo compounds to the corresponding amines.|||Belongs to the azoreductase type 1 family.|||Binds 1 FMN per subunit.|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Quinone reductase that provides resistance to thiol-specific stress caused by electrophilic quinones. http://togogenome.org/gene/2604047:PDMSB3_RS19560 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDN1 ^@ Domain|||Function|||PTM|||Similarity|||Subcellular Location Annotation ^@ Belongs to the CheB family.|||Contains a C-terminal catalytic domain, and an N-terminal region which modulates catalytic activity.|||Cytoplasm|||Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid.|||Phosphorylated by CheA. Phosphorylation of the N-terminal regulatory domain activates the methylesterase activity. http://togogenome.org/gene/2604047:PDMSB3_RS14210 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZF00 ^@ Similarity ^@ Belongs to the UDPGP type 2 family. http://togogenome.org/gene/2604047:PDMSB3_RS11405 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z262 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS19875 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2P2 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the ATPase C chain family.|||Cell membrane|||F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.|||Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS22035 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAI7 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS17050 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGD4 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the succinate/malate CoA ligase beta subunit family.|||Binds 1 Mg(2+) ion per subunit.|||Heterotetramer of two alpha and two beta subunits.|||Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. http://togogenome.org/gene/2604047:PDMSB3_RS07025 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEP2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS30065 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZQS4 ^@ Function|||Similarity ^@ Belongs to the HAD-like hydrolase superfamily. S-2-haloalkanoic acid dehalogenase family.|||Catalyzes the hydrolytic dehalogenation of small (S)-2-haloalkanoic acids to yield the corresponding (R)-2-hydroxyalkanoic acids. http://togogenome.org/gene/2604047:PDMSB3_RS14730 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2D4 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. LepA subfamily.|||Cell membrane|||Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner. http://togogenome.org/gene/2604047:PDMSB3_RS08365 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YV80 ^@ Similarity ^@ Belongs to the bacterial solute-binding protein 3 family. http://togogenome.org/gene/2604047:PDMSB3_RS11815 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZM97 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the SmpB family.|||Cytoplasm|||Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA; the nascent peptide is terminated with the 'tag peptide' encoded by the tmRNA and targeted for degradation. The ribosome is freed to recommence translation, which seems to be the essential function of trans-translation. http://togogenome.org/gene/2604047:PDMSB3_RS21685 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YX31 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS18275 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGN2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS25740 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKY3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the UPF0410 family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS19905 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGC5 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the MnmG family.|||Cytoplasm|||Homodimer. Heterotetramer of two MnmE and two MnmG subunits.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34. http://togogenome.org/gene/2604047:PDMSB3_RS04465 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YSP5 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.|||Binds 2 divalent metal cations per subunit. Has a high-affinity and a low affinity metal-binding site. The true nature of the physiological cofactor is under debate. The enzyme is active with cobalt, zinc, manganese or divalent iron ions. Most likely, methionine aminopeptidases function as mononuclear Fe(2+)-metalloproteases under physiological conditions, and the catalytically relevant metal-binding site has been assigned to the histidine-containing high-affinity site.|||Monomer.|||Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed. http://togogenome.org/gene/2604047:PDMSB3_RS00605 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1G2 ^@ Similarity ^@ Belongs to the polyphosphate kinase 2 (PPK2) family. Class I subfamily. http://togogenome.org/gene/2604047:PDMSB3_RS27575 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YXS7 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS10245 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDE4 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS12965 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEG3 ^@ Caution|||Cofactor|||Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation ^@ Belongs to the radical SAM superfamily. RlmN family.|||Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Reaction proceeds by a ping-pong mechanism involving intermediate methylation of a conserved cysteine residue.|||Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity. http://togogenome.org/gene/2604047:PDMSB3_RS33935 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YYM0 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS03080 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1M6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the AAE transporter (TC 2.A.81) family.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS02950 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAK3 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ExbB/TolQ family.|||Cell inner membrane|||Membrane|||Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.|||The Tol-Pal system is composed of five core proteins: the inner membrane proteins TolA, TolQ and TolR, the periplasmic protein TolB and the outer membrane protein Pal. They form a network linking the inner and outer membranes and the peptidoglycan layer. http://togogenome.org/gene/2604047:PDMSB3_RS26770 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YXP2 ^@ Function|||Similarity ^@ Belongs to the catalase family.|||Has an organic peroxide-dependent peroxidase activity. http://togogenome.org/gene/2604047:PDMSB3_RS16335 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YW58 ^@ Similarity ^@ Belongs to the FKBP-type PPIase family. http://togogenome.org/gene/2604047:PDMSB3_RS06075 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBT2 ^@ Cofactor|||Similarity ^@ Belongs to the complex I 24 kDa subunit family.|||Binds 1 [2Fe-2S] cluster. http://togogenome.org/gene/2604047:PDMSB3_RS10290 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z6Q8 ^@ Similarity ^@ Belongs to the bacterial ring-hydroxylating dioxygenase beta subunit family. http://togogenome.org/gene/2604047:PDMSB3_RS11025 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z6V9 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the phospholipase A1 family.|||Binds 1 Ca(2+) ion per monomer. In the dimeric form the Ca(2+) is bound by different amino acids with binding of each Ca(2+) shared with ligands coming from each monomer. The Ca(2+) ion may have a role in catalysis.|||Cell outer membrane|||Homodimer; dimerization is reversible, and the dimeric form is the active one.|||Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS17535 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGA9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the class-I aminoacyl-tRNA synthetase family.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS06370 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBW5 ^@ Similarity|||Subunit ^@ Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS17365 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z885 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the HesB/IscA family.|||Binds 1 iron-sulfur cluster per subunit.|||Homodimer.|||Required for insertion of 4Fe-4S clusters. http://togogenome.org/gene/2604047:PDMSB3_RS25205 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNU9 ^@ Similarity ^@ Belongs to the ABC transporter superfamily. http://togogenome.org/gene/2604047:PDMSB3_RS19330 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDJ6 ^@ Similarity ^@ Belongs to the aldehyde dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS05850 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZE93 ^@ Function|||Similarity ^@ Belongs to the methylglyoxal synthase family.|||Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate. http://togogenome.org/gene/2604047:PDMSB3_RS01450 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z5N8 ^@ Similarity ^@ Belongs to the enoyl-CoA hydratase/isomerase family. http://togogenome.org/gene/2604047:PDMSB3_RS19480 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZK74 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Bacterial flagellum basal body|||Belongs to the flagella basal body rod proteins family.|||The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod. The rod consists of about 26 subunits of FlgG in the distal portion, and FlgB, FlgC and FlgF are thought to build up the proximal portion of the rod with about 6 subunits each. http://togogenome.org/gene/2604047:PDMSB3_RS17305 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZG75 ^@ Function|||Similarity ^@ Belongs to the Dus family. DusB subfamily.|||Belongs to the dus family.|||Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. http://togogenome.org/gene/2604047:PDMSB3_RS23350 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVJ2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS27665 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKS8 ^@ Similarity ^@ Belongs to the ModE family. http://togogenome.org/gene/2604047:PDMSB3_RS17180 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPD0 ^@ Similarity ^@ Belongs to the fatty acid desaturase type 2 family. http://togogenome.org/gene/2604047:PDMSB3_RS18490 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2L3 ^@ Similarity ^@ Belongs to the MlaA family. http://togogenome.org/gene/2604047:PDMSB3_RS09430 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z219 ^@ Function|||Similarity ^@ Belongs to the SELO family.|||Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). http://togogenome.org/gene/2604047:PDMSB3_RS31950 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZML2 ^@ Similarity ^@ Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. http://togogenome.org/gene/2604047:PDMSB3_RS32825 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKA6 ^@ Similarity ^@ Belongs to the class-II fumarase/aspartase family. http://togogenome.org/gene/2604047:PDMSB3_RS10285 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZG87 ^@ Similarity ^@ Belongs to the bacterial ring-hydroxylating dioxygenase alpha subunit family. http://togogenome.org/gene/2604047:PDMSB3_RS27215 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZHT9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS18730 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUJ7 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS4 family.|||One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.|||Part of the 30S ribosomal subunit. Contacts protein S5. The interaction surface between S4 and S5 is involved in control of translational fidelity.|||With S5 and S12 plays an important role in translational accuracy. http://togogenome.org/gene/2604047:PDMSB3_RS24020 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZK67 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ABC-2 integral membrane protein family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS31845 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZRF4 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS29590 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDA8 ^@ Similarity ^@ Belongs to the acyl-CoA dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS24565 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNL4 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS35285 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFG3 ^@ Similarity ^@ Belongs to the heat shock protein 70 family. http://togogenome.org/gene/2604047:PDMSB3_RS32140 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZK08 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS28425 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCV5 ^@ Similarity ^@ Belongs to the class I fructose-bisphosphate aldolase family. http://togogenome.org/gene/2604047:PDMSB3_RS20580 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIQ1 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS23060 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVI0 ^@ Similarity ^@ Belongs to the phosphoribulokinase family. http://togogenome.org/gene/2604047:PDMSB3_RS23145 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YX91 ^@ Cofactor|||Similarity ^@ Belongs to the bacterial PQQ dehydrogenase family.|||Binds 1 Ca(2+) ion per subunit.|||Binds 1 PQQ group per subunit. http://togogenome.org/gene/2604047:PDMSB3_RS13150 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YTL1 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.|||Cytoplasm|||Homodimer. Forms a heterotetramer with IscU, interacts with other sulfur acceptors.|||Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins. http://togogenome.org/gene/2604047:PDMSB3_RS09335 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YT45 ^@ Function|||Induction|||Similarity|||Subcellular Location Annotation|||Subunit ^@ ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.|||Belongs to the peptidase S16 family.|||By heat shock.|||Cytoplasm|||Homohexamer. Organized in a ring with a central cavity. http://togogenome.org/gene/2604047:PDMSB3_RS08210 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z6E1 ^@ Function|||Similarity|||Subunit ^@ Belongs to the ribose 5-phosphate isomerase family.|||Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS23330 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZB05 ^@ Similarity ^@ Belongs to the small heat shock protein (HSP20) family. http://togogenome.org/gene/2604047:PDMSB3_RS02040 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YSH4 ^@ Function|||Similarity ^@ Belongs to the PurU family.|||Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). http://togogenome.org/gene/2604047:PDMSB3_RS00965 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCC9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the histone-like protein H-NS family.|||nucleoid http://togogenome.org/gene/2604047:PDMSB3_RS18880 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUK5 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS12 family.|||Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.|||Part of the 30S ribosomal subunit. Contacts proteins S8 and S17. May interact with IF1 in the 30S initiation complex.|||With S4 and S5 plays an important role in translational accuracy. http://togogenome.org/gene/2604047:PDMSB3_RS15985 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFP9 ^@ Function|||Similarity ^@ Belongs to the DMRL synthase family.|||Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. http://togogenome.org/gene/2604047:PDMSB3_RS32890 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZP80 ^@ PTM|||Similarity|||Subunit ^@ Belongs to the gamma-glutamyltransferase family.|||Cleaved by autocatalysis into a large and a small subunit.|||This enzyme consists of two polypeptide chains, which are synthesized in precursor form from a single polypeptide. http://togogenome.org/gene/2604047:PDMSB3_RS25820 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVV2 ^@ Function|||Similarity ^@ Antitoxin component of a type II toxin-antitoxin (TA) system.|||Belongs to the phD/YefM antitoxin family. http://togogenome.org/gene/2604047:PDMSB3_RS07460 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCD2 ^@ Activity Regulation|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the fluoride channel Fluc/FEX (TC 1.A.43) family.|||Cell membrane|||Fluoride-specific ion channel. Important for reducing fluoride concentration in the cell, thus reducing its toxicity.|||Membrane|||Na(+) is not transported, but it plays an essential structural role and its presence is essential for fluoride channel function. http://togogenome.org/gene/2604047:PDMSB3_RS16390 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCH6 ^@ Function|||Similarity ^@ Belongs to the ribF family.|||Catalyzes the phosphorylation of riboflavin to FMN followed by the adenylation of FMN to FAD. http://togogenome.org/gene/2604047:PDMSB3_RS33145 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YYI8 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS12025 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZE98 ^@ Domain|||Function|||Similarity ^@ Belongs to the RecA family. RadA subfamily.|||Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage.|||DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.|||Plays a role in repairing double-strand DNA breaks, probably involving stabilizing or processing branched DNA or blocked replication forks.|||The middle region has homology to RecA with ATPase motifs including the RadA KNRFG motif, while the C-terminus is homologous to Lon protease. http://togogenome.org/gene/2604047:PDMSB3_RS16485 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCI9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS18675 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDB2 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the MsrQ family.|||Binds 1 FMN per subunit.|||Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.|||Cell membrane|||Heterodimer of a catalytic subunit (MsrP) and a heme-binding subunit (MsrQ).|||Membrane|||Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain. http://togogenome.org/gene/2604047:PDMSB3_RS08250 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCL6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the bacterial sugar transferase family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS24760 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z346 ^@ Similarity ^@ Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS00540 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8G7 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the radical SAM superfamily. 7-carboxy-7-deazaguanine synthase family.|||Binds 1 S-adenosyl-L-methionine per subunit.|||Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.|||Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS33985 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKR8 ^@ Similarity ^@ Belongs to the four-carbon acid sugar kinase family. http://togogenome.org/gene/2604047:PDMSB3_RS33185 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZVP3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the DoxX family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS17955 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZD23 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the FtsA/MreB family.|||Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring.|||Cell membrane|||Self-interacts. Interacts with FtsZ. http://togogenome.org/gene/2604047:PDMSB3_RS17405 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJ96 ^@ Similarity ^@ Belongs to the ABC transporter superfamily. http://togogenome.org/gene/2604047:PDMSB3_RS12215 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEC3 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Acetyl-CoA carboxylase is a heterohexamer composed of biotin carboxyl carrier protein (AccB), biotin carboxylase (AccC) and two subunits each of ACCase subunit alpha (AccA) and ACCase subunit beta (AccD).|||Belongs to the AccA family.|||Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS29805 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z3F4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS27935 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z3B3 ^@ Similarity ^@ Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS17255 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZG69 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS22490 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJK1 ^@ Similarity|||Subunit ^@ Belongs to the aldehyde dehydrogenase family.|||Homotetramer. http://togogenome.org/gene/2604047:PDMSB3_RS09530 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZD86 ^@ Function|||Similarity|||Subunit ^@ Belongs to the glycosyltransferase 20 family.|||Homotetramer.|||Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-alpha-D-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor. http://togogenome.org/gene/2604047:PDMSB3_RS17360 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJ89 ^@ Function|||Similarity ^@ Belongs to the anhydro-N-acetylmuramic acid kinase family.|||Catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling. http://togogenome.org/gene/2604047:PDMSB3_RS13890 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z7D2 ^@ Similarity ^@ In the C-terminal section; belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. http://togogenome.org/gene/2604047:PDMSB3_RS30530 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZQX7 ^@ Function|||Similarity|||Subunit ^@ Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.|||Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.|||The complex is composed of two ATP-binding proteins (PotA), two transmembrane proteins (PotB and PotC) and a solute-binding protein (PotD). http://togogenome.org/gene/2604047:PDMSB3_RS28260 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YW60 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS04650 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1R5 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS18085 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGT0 ^@ Similarity ^@ Belongs to the thiolase-like superfamily. Thiolase family. http://togogenome.org/gene/2604047:PDMSB3_RS05975 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YST7 ^@ Cofactor|||Similarity ^@ Belongs to the TPP enzyme family.|||Binds 1 Mg(2+) ion per subunit.|||Binds 1 thiamine pyrophosphate per subunit. http://togogenome.org/gene/2604047:PDMSB3_RS04510 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDP1 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS18720 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDC1 ^@ Similarity|||Subunit ^@ Belongs to the bacterial ribosomal protein bL17 family.|||Part of the 50S ribosomal subunit. Contacts protein L32. http://togogenome.org/gene/2604047:PDMSB3_RS02075 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUD1 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS14040 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z7E4 ^@ Similarity ^@ Belongs to the 3-oxoacid CoA-transferase subunit B family. http://togogenome.org/gene/2604047:PDMSB3_RS32345 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZRL6 ^@ Similarity ^@ In the C-terminal section; belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. http://togogenome.org/gene/2604047:PDMSB3_RS05420 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUV8 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the ABC transporter superfamily. ABCF family. Uup subfamily.|||Cytoplasm|||Probably plays a role in ribosome assembly or function. May be involved in resolution of branched DNA intermediates that result from template switching in postreplication gaps. Binds DNA and has ATPase activity. http://togogenome.org/gene/2604047:PDMSB3_RS12000 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZD14 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the phospholipase D family. Cardiolipin synthase subfamily. ClsA sub-subfamily.|||Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.|||Cell membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS05425 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1T3 ^@ Function|||Similarity|||Subunit ^@ Belongs to the type II topoisomerase GyrB family.|||Belongs to the type II topoisomerase family. ParE type 1 subfamily.|||Heterotetramer composed of ParC and ParE.|||Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule. http://togogenome.org/gene/2604047:PDMSB3_RS28035 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZLX8 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS19800 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKD3 ^@ Similarity ^@ Belongs to the TPP enzyme family. http://togogenome.org/gene/2604047:PDMSB3_RS13990 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZN80 ^@ Cofactor|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.|||Binds 2 magnesium ions per tetramer.|||Cytoplasm|||Tetramer of two alpha and two beta subunits. http://togogenome.org/gene/2604047:PDMSB3_RS16865 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGA5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS13000 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YTK2 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-I aminoacyl-tRNA synthetase family.|||Catalyzes the attachment of tryptophan to tRNA(Trp).|||Cytoplasm|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS26925 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKH7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the cytochrome c oxidase subunit 3 family.|||Cell membrane|||Cytochrome bo(3) ubiquinol terminal oxidase is the component of the aerobic respiratory chain of E.coli that predominates when cells are grown at high aeration. Has proton pump activity across the membrane in addition to electron transfer, pumping 2 protons/electron.|||Heterooctamer of two A chains, two B chains, two C chains and two D chains.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS13390 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDM5 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS27720 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YXT7 ^@ Function|||Similarity ^@ Belongs to the NifD/NifK/NifE/NifN family.|||This protein may play a role in the biosynthesis of the prosthetic group of nitrogenase (FeMo cofactor). http://togogenome.org/gene/2604047:PDMSB3_RS24115 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNF2 ^@ Similarity ^@ Belongs to the ketopantoate reductase family. http://togogenome.org/gene/2604047:PDMSB3_RS22135 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2Y9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS19940 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKF3 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS19805 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8Z4 ^@ Similarity ^@ Belongs to the leucine-binding protein family. http://togogenome.org/gene/2604047:PDMSB3_RS01800 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZA74 ^@ Similarity ^@ Belongs to the YciI family. http://togogenome.org/gene/2604047:PDMSB3_RS13130 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDI2 ^@ Function|||Similarity ^@ Belongs to the heat shock protein 70 family.|||Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB. http://togogenome.org/gene/2604047:PDMSB3_RS08205 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFA8 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. RlmB subfamily.|||Cytoplasm|||Specifically methylates the ribose of guanosine 2251 in 23S rRNA. http://togogenome.org/gene/2604047:PDMSB3_RS08795 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z6G9 ^@ Similarity|||Subunit ^@ Belongs to the MoaE family.|||Heterotetramer of 2 MoaD subunits and 2 MoaE subunits. Also stable as homodimer. The enzyme changes between these two forms during catalysis. http://togogenome.org/gene/2604047:PDMSB3_RS11980 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZE27 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the transferase hexapeptide repeat family.|||Cytoplasm|||Homotrimer. http://togogenome.org/gene/2604047:PDMSB3_RS21055 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YX04 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the tRNA pseudouridine synthase TruA family.|||Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS30245 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YY63 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS24205 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZK95 ^@ Similarity ^@ Belongs to the GST superfamily. NadH family. http://togogenome.org/gene/2604047:PDMSB3_RS32615 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNU1 ^@ Similarity ^@ Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. http://togogenome.org/gene/2604047:PDMSB3_RS12155 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVN5 ^@ Similarity ^@ Belongs to the peptidase C40 family. http://togogenome.org/gene/2604047:PDMSB3_RS16750 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZF09 ^@ Function|||Similarity|||Subunit ^@ Belongs to the kynureninase family.|||Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3-hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3-hydroxyanthranilic acid (3-OHAA), respectively.|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS31925 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWM1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS27775 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZI05 ^@ Similarity ^@ Belongs to the ArsC family. http://togogenome.org/gene/2604047:PDMSB3_RS15465 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFP2 ^@ Similarity ^@ Belongs to the 4-hydroxybenzoyl-CoA thioesterase family. http://togogenome.org/gene/2604047:PDMSB3_RS00475 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z5K8 ^@ Similarity ^@ Belongs to the type IA topoisomerase family. http://togogenome.org/gene/2604047:PDMSB3_RS09415 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBV2 ^@ Similarity ^@ Belongs to the BolA/IbaG family. http://togogenome.org/gene/2604047:PDMSB3_RS28875 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZQB5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS28925 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZQC0 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS35420 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFI0 ^@ Similarity ^@ Belongs to the aldehyde dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS02015 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZI91 ^@ Similarity|||Subunit ^@ Belongs to the KdsC family.|||Homotetramer. http://togogenome.org/gene/2604047:PDMSB3_RS08050 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCM1 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS24405 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGL4 ^@ Function|||Similarity ^@ Allosteric enzyme that catalyzes the rate-limiting step in glycogen catabolism, the phosphorolytic cleavage of glycogen to produce glucose-1-phosphate, and plays a central role in maintaining cellular and organismal glucose homeostasis.|||Belongs to the glycogen phosphorylase family.|||Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. http://togogenome.org/gene/2604047:PDMSB3_RS34180 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWW5 ^@ Similarity ^@ Belongs to the Gfa family. http://togogenome.org/gene/2604047:PDMSB3_RS05840 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBS9 ^@ Activity Regulation|||Cofactor|||Function|||Similarity ^@ Allosterically activated by GTP.|||Belongs to the UPRTase family.|||Binds 1 Mg(2+) ion per subunit. The magnesium is bound as Mg-PRPP.|||Catalyzes the conversion of uracil and 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) to UMP and diphosphate. http://togogenome.org/gene/2604047:PDMSB3_RS14475 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2C9 ^@ Function ^@ This protein is a positive regulator for the phosphate regulon. Transcription of this operon is positively regulated by PhoB and PhoR when phosphate is limited. http://togogenome.org/gene/2604047:PDMSB3_RS21425 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZA95 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS13290 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEL4 ^@ Cofactor|||Similarity ^@ Belongs to the DNA repair enzymes AP/ExoA family.|||Probably binds two magnesium or manganese ions per subunit. http://togogenome.org/gene/2604047:PDMSB3_RS21085 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZM45 ^@ Function|||Similarity ^@ Belongs to the folylpolyglutamate synthase family.|||Functions in two distinct reactions of the de novo folate biosynthetic pathway. Catalyzes the addition of a glutamate residue to dihydropteroate (7,8-dihydropteroate or H2Pte) to form dihydrofolate (7,8-dihydrofolate monoglutamate or H2Pte-Glu). Also catalyzes successive additions of L-glutamate to tetrahydrofolate or 10-formyltetrahydrofolate or 5,10-methylenetetrahydrofolate, leading to folylpolyglutamate derivatives. http://togogenome.org/gene/2604047:PDMSB3_RS11845 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGX9 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the RNase HII family.|||Cytoplasm|||Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.|||Manganese or magnesium. Binds 1 divalent metal ion per monomer in the absence of substrate. May bind a second metal ion after substrate binding. http://togogenome.org/gene/2604047:PDMSB3_RS17710 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2J7 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the glycosyltransferase 51 family.|||Cell inner membrane|||Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. http://togogenome.org/gene/2604047:PDMSB3_RS06040 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJW6 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the triosephosphate isomerase family.|||Cytoplasm|||Homodimer.|||Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P). http://togogenome.org/gene/2604047:PDMSB3_RS13740 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZN43 ^@ Similarity ^@ Belongs to the ABC transporter superfamily. http://togogenome.org/gene/2604047:PDMSB3_RS18700 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8L7 ^@ Function|||Similarity ^@ Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.|||Necessary for normal cell division and for the maintenance of normal septation. http://togogenome.org/gene/2604047:PDMSB3_RS34150 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEZ7 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS17560 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWA8 ^@ Cofactor|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the Fur family.|||Binds 1 Mn(2+) or Fe(2+) ion per subunit.|||Binds 1 zinc ion per subunit.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS19045 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2M4 ^@ Similarity ^@ Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family. http://togogenome.org/gene/2604047:PDMSB3_RS08960 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCZ9 ^@ Similarity ^@ Belongs to the purine nucleoside phosphorylase YfiH/LACC1 family. http://togogenome.org/gene/2604047:PDMSB3_RS09815 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDD2 ^@ Function|||Similarity|||Subunit ^@ Belongs to the TER reductase family.|||Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon-carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP).|||Monomer. http://togogenome.org/gene/2604047:PDMSB3_RS14700 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZI67 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the P-Pant transferase superfamily. AcpS family.|||Cytoplasm|||Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein. http://togogenome.org/gene/2604047:PDMSB3_RS21040 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZA46 ^@ Caution|||Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the isocitrate and isopropylmalate dehydrogenases family. LeuB type 1 subfamily.|||Binds 1 Mg(2+) or Mn(2+) ion per subunit.|||Catalyzes the oxidation of 3-carboxy-2-hydroxy-4-methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2-oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.|||Cytoplasm|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS19455 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDL6 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.|||Bacterial flagellum basal body|||Belongs to the FlgH family.|||Cell outer membrane|||The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod. http://togogenome.org/gene/2604047:PDMSB3_RS21625 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJ57 ^@ Similarity ^@ Belongs to the TPP enzyme family. http://togogenome.org/gene/2604047:PDMSB3_RS11410 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YTC8 ^@ Similarity ^@ Belongs to the carbamate kinase family. http://togogenome.org/gene/2604047:PDMSB3_RS11115 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDR4 ^@ Similarity ^@ Belongs to the allantoicase family. http://togogenome.org/gene/2604047:PDMSB3_RS18845 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJX4 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL23 family.|||One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome.|||Part of the 50S ribosomal subunit. Contacts protein L29, and trigger factor when it is bound to the ribosome. http://togogenome.org/gene/2604047:PDMSB3_RS11450 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAN3 ^@ Similarity ^@ Belongs to the small heat shock protein (HSP20) family. http://togogenome.org/gene/2604047:PDMSB3_RS27280 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZLU8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the nlpA lipoprotein family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS13955 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVW3 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS14560 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVY8 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family.|||Binds 2 Zn(2+) ions per subunit.|||Monomer.|||Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl-glutathione to form glutathione and D-lactic acid. http://togogenome.org/gene/2604047:PDMSB3_RS18680 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2L7 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the MsrP family.|||Binds 1 Mo-molybdopterin (Mo-MPT) cofactor per subunit.|||Heterodimer of a catalytic subunit (MsrP) and a heme-binding subunit (MsrQ).|||Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide. http://togogenome.org/gene/2604047:PDMSB3_RS27085 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z395 ^@ Function|||Similarity ^@ Belongs to the GMC oxidoreductase family.|||Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate. http://togogenome.org/gene/2604047:PDMSB3_RS19160 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8R2 ^@ Function|||Subcellular Location Annotation|||Subunit ^@ Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS14005 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBL8 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bL35 family. http://togogenome.org/gene/2604047:PDMSB3_RS32915 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZMZ4 ^@ Similarity ^@ Belongs to the CDP-alcohol phosphatidyltransferase class-I family. http://togogenome.org/gene/2604047:PDMSB3_RS26570 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZTM3 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS24530 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJG4 ^@ Function|||Similarity ^@ Belongs to the ribose 1,5-bisphosphokinase family.|||Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP). http://togogenome.org/gene/2604047:PDMSB3_RS28085 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZQ16 ^@ Similarity ^@ Belongs to the aldehyde dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS00580 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z5L1 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the FtsA/MreB family.|||Cytoplasm|||Forms membrane-associated dynamic filaments that are essential for cell shape determination. Acts by regulating cell wall synthesis and cell elongation, and thus cell shape. A feedback loop between cell geometry and MreB localization may maintain elongated cell shape by targeting cell wall growth to regions of negative cell wall curvature.|||Forms polymers. http://togogenome.org/gene/2604047:PDMSB3_RS17750 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWB6 ^@ Function ^@ This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. http://togogenome.org/gene/2604047:PDMSB3_RS01185 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z7A1 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS15365 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YU03 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS35220 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZQ38 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS01725 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8W0 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.|||Cytoplasm|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide. http://togogenome.org/gene/2604047:PDMSB3_RS18870 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDD8 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.|||Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS17675 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGM2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the bacterial solute-binding protein 2 family.|||Periplasm http://togogenome.org/gene/2604047:PDMSB3_RS17095 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2I4 ^@ Similarity ^@ Belongs to the bacterial phospholipase C family. http://togogenome.org/gene/2604047:PDMSB3_RS16650 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEZ9 ^@ Similarity ^@ Belongs to the UPF0234 family. http://togogenome.org/gene/2604047:PDMSB3_RS34620 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPV6 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS11355 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z261 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ATPase alpha/beta chains family.|||Cell membrane|||F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has four main subunits: a(1), b(1), b'(1) and c(9-12).|||Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. http://togogenome.org/gene/2604047:PDMSB3_RS35555 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZSW2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS17840 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPL1 ^@ Function|||Similarity ^@ Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage.|||Belongs to the Nudix hydrolase family. RppH subfamily. http://togogenome.org/gene/2604047:PDMSB3_RS34835 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWZ5 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS21225 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZM69 ^@ Similarity ^@ Belongs to the bacterial solute-binding protein ModA family. http://togogenome.org/gene/2604047:PDMSB3_RS18160 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPP7 ^@ Caution|||Cofactor|||Function|||Similarity|||Subunit ^@ Also exhibits azoreductase activity. Catalyzes the reductive cleavage of the azo bond in aromatic azo compounds to the corresponding amines.|||Belongs to the azoreductase type 1 family.|||Binds 1 FMN per subunit.|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Quinone reductase that provides resistance to thiol-specific stress caused by electrophilic quinones. http://togogenome.org/gene/2604047:PDMSB3_RS32490 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEC8 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS30180 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZLS6 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TRAP transporter small permease family.|||Cell inner membrane|||Membrane|||Part of the tripartite ATP-independent periplasmic (TRAP) transport system.|||The complex comprises the extracytoplasmic solute receptor protein and the two transmembrane proteins. http://togogenome.org/gene/2604047:PDMSB3_RS01335 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZA10 ^@ Similarity ^@ Belongs to the acyl-CoA dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS13430 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z7A0 ^@ Cofactor|||Similarity ^@ Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.|||Binds 1 FAD per subunit. http://togogenome.org/gene/2604047:PDMSB3_RS18250 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFL6 ^@ Function|||PTM|||Similarity|||Subcellular Location Annotation ^@ Belongs to the prokaryotic/mitochondrial release factor family.|||Cytoplasm|||Methylated by PrmC. Methylation increases the termination efficiency of RF1.|||Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. http://togogenome.org/gene/2604047:PDMSB3_RS16050 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZER7 ^@ Caution|||Function|||Similarity ^@ Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.|||Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS23225 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZN31 ^@ Similarity ^@ Belongs to the bacterial solute-binding protein 5 family. http://togogenome.org/gene/2604047:PDMSB3_RS23840 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNB9 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS02435 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCW0 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the LptD family.|||Cell outer membrane|||Component of the lipopolysaccharide transport and assembly complex. Interacts with LptE and LptA.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. http://togogenome.org/gene/2604047:PDMSB3_RS23480 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJ05 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the cytochrome ubiquinol oxidase subunit 2 family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS20285 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDY9 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the OXA1/ALB3/YidC family. Type 1 subfamily.|||Cell membrane|||Interacts with the Sec translocase complex via SecD. Specifically interacts with transmembrane segments of nascent integral membrane proteins during membrane integration.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane|||Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. http://togogenome.org/gene/2604047:PDMSB3_RS17315 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z880 ^@ Domain|||Similarity ^@ Belongs to the PurH family.|||The IMP cyclohydrolase activity resides in the N-terminal region. http://togogenome.org/gene/2604047:PDMSB3_RS01135 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YU83 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. http://togogenome.org/gene/2604047:PDMSB3_RS23055 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z309 ^@ Caution|||Cofactor|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the FBPase class 1 family.|||Binds 2 magnesium ions per subunit.|||Cytoplasm|||Homotetramer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS02525 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAF0 ^@ Function ^@ The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane. http://togogenome.org/gene/2604047:PDMSB3_RS18360 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJP3 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the cytochrome b family.|||Binds 2 heme groups non-covalently.|||Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.|||Membrane|||The main subunits of complex b-c1 are: cytochrome b, cytochrome c1 and the Rieske protein. http://togogenome.org/gene/2604047:PDMSB3_RS17995 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWC7 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the MurCDEF family. MurF subfamily.|||Cytoplasm|||Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein. http://togogenome.org/gene/2604047:PDMSB3_RS00215 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1F2 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Bacterial microcompartment|||Belongs to the EutB family.|||Binds between the large and small subunits.|||Catalyzes the deamination of various vicinal amino-alcohols to oxo compounds. Allows this organism to utilize ethanolamine as the sole source of nitrogen and carbon in the presence of vitamin B12.|||The basic unit is a heterodimer which dimerizes to form tetramers. The heterotetramers trimerize; 6 large subunits form a core ring with 6 small subunits projecting outwards. http://togogenome.org/gene/2604047:PDMSB3_RS34610 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z3T8 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS14150 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2C2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS28735 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZQ97 ^@ Similarity ^@ Belongs to the peptidase S33 family. http://togogenome.org/gene/2604047:PDMSB3_RS18440 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2L2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the imidazoleglycerol-phosphate dehydratase family.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS11685 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCW2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS25890 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZTD3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS01355 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8S0 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the AceK family.|||Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS16700 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZF05 ^@ Similarity ^@ Belongs to the pirin family. http://togogenome.org/gene/2604047:PDMSB3_RS06810 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YV19 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the TonB-dependent receptor family.|||Cell outer membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS11795 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZE66 ^@ Activity Regulation|||Caution|||Function|||Similarity|||Subunit ^@ Belongs to the IMPDH/GMPR family.|||Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.|||Homotetramer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Mycophenolic acid (MPA) is a non-competitive inhibitor that prevents formation of the closed enzyme conformation by binding to the same site as the amobile flap. In contrast, mizoribine monophosphate (MZP) is a competitive inhibitor that induces the closed conformation. MPA is a potent inhibitor of mammalian IMPDHs but a poor inhibitor of the bacterial enzymes. MZP is a more potent inhibitor of bacterial IMPDH. http://togogenome.org/gene/2604047:PDMSB3_RS01395 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z5N6 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-I aminoacyl-tRNA synthetase family.|||Cytoplasm|||Monomer. http://togogenome.org/gene/2604047:PDMSB3_RS30960 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJG7 ^@ Similarity ^@ Belongs to the proline racemase family. http://togogenome.org/gene/2604047:PDMSB3_RS01605 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1I9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS02020 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8Y8 ^@ Similarity ^@ Belongs to the SIS family. GutQ/KpsF subfamily. http://togogenome.org/gene/2604047:PDMSB3_RS19365 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZG31 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Bacterial flagellum basal body|||Belongs to the FliG family.|||FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS21355 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVA1 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bS21 family. http://togogenome.org/gene/2604047:PDMSB3_RS30405 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z3H3 ^@ Similarity ^@ Belongs to the enoyl-CoA hydratase/isomerase family. http://togogenome.org/gene/2604047:PDMSB3_RS11900 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZMB0 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the RRF family.|||Cytoplasm|||Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another. http://togogenome.org/gene/2604047:PDMSB3_RS02055 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCR6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the autoinducer-2 exporter (AI-2E) (TC 2.A.86) family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS15760 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFT2 ^@ Similarity ^@ Belongs to the peptidase C59 family. http://togogenome.org/gene/2604047:PDMSB3_RS05880 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1U3 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily.|||Cell membrane|||Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system and for the release of the potassium ions to the cytoplasm.|||The system is composed of three essential subunits: KdpA, KdpB and KdpC. http://togogenome.org/gene/2604047:PDMSB3_RS05355 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBI6 ^@ Similarity ^@ Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. http://togogenome.org/gene/2604047:PDMSB3_RS32870 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YYH6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS07730 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKK7 ^@ Function|||Similarity ^@ Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.|||Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs. http://togogenome.org/gene/2604047:PDMSB3_RS26700 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZC93 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS27885 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z3B2 ^@ Function|||Similarity ^@ Belongs to the heat shock protein 70 family.|||Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB. http://togogenome.org/gene/2604047:PDMSB3_RS20645 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZRE6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the periplasmic pilus chaperone family.|||Periplasm http://togogenome.org/gene/2604047:PDMSB3_RS02490 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z5R8 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-II aminoacyl-tRNA synthetase family.|||Cytoplasm|||Tetramer of two alpha and two beta subunits. http://togogenome.org/gene/2604047:PDMSB3_RS15190 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNP2 ^@ Similarity ^@ Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS17325 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZF81 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the RuvC family.|||Binds 2 Mg(2+) ion per subunit.|||Cytoplasm|||Homodimer which binds Holliday junction (HJ) DNA. The HJ becomes 2-fold symmetrical on binding to RuvC with unstacked arms; it has a different conformation from HJ DNA in complex with RuvA. In the full resolvosome a probable DNA-RuvA(4)-RuvB(12)-RuvC(2) complex forms which resolves the HJ.|||The RuvA-RuvB-RuvC complex processes Holliday junction (HJ) DNA during genetic recombination and DNA repair. Endonuclease that resolves HJ intermediates. Cleaves cruciform DNA by making single-stranded nicks across the HJ at symmetrical positions within the homologous arms, yielding a 5'-phosphate and a 3'-hydroxyl group; requires a central core of homology in the junction. The consensus cleavage sequence is 5'-(A/T)TT(C/G)-3'. Cleavage occurs on the 3'-side of the TT dinucleotide at the point of strand exchange. HJ branch migration catalyzed by RuvA-RuvB allows RuvC to scan DNA until it finds its consensus sequence, where it cleaves and resolves the cruciform DNA. http://togogenome.org/gene/2604047:PDMSB3_RS20895 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YV79 ^@ Similarity ^@ Belongs to the GSP E family. http://togogenome.org/gene/2604047:PDMSB3_RS07030 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z685 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS33275 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZRY5 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS13060 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEH7 ^@ Activity Regulation|||Caution|||Function|||Miscellaneous|||Similarity|||Subunit ^@ Allosterically activated by GTP, when glutamine is the substrate; GTP has no effect on the reaction when ammonia is the substrate. The allosteric effector GTP functions by stabilizing the protein conformation that binds the tetrahedral intermediate(s) formed during glutamine hydrolysis. Inhibited by the product CTP, via allosteric rather than competitive inhibition.|||Belongs to the CTP synthase family.|||CTPSs have evolved a hybrid strategy for distinguishing between UTP and CTP. The overlapping regions of the product feedback inhibitory and substrate sites recognize a common feature in both compounds, the triphosphate moiety. To differentiate isosteric substrate and product pyrimidine rings, an additional pocket far from the expected kinase/ligase catalytic site, specifically recognizes the cytosine and ribose portions of the product inhibitor.|||Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.|||Homotetramer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS25940 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZTD9 ^@ Similarity ^@ Belongs to the iron/ascorbate-dependent oxidoreductase family. http://togogenome.org/gene/2604047:PDMSB3_RS29425 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWB3 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS12970 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZHF1 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the NDK family.|||Cytoplasm|||Homotetramer.|||Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. http://togogenome.org/gene/2604047:PDMSB3_RS00680 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZC90 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the DksA family.|||Cytoplasm|||Interacts directly with the RNA polymerase.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. http://togogenome.org/gene/2604047:PDMSB3_RS09115 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFN5 ^@ Caution|||Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the IspF family.|||Binds 1 divalent metal cation per subunit.|||Homotrimer.|||Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS01580 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z5P2 ^@ Subcellular Location Annotation ^@ Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS19195 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZH92 ^@ Cofactor|||Domain|||Function|||Miscellaneous|||Similarity|||Subunit ^@ A single active site specifically recognizes both ATP and CTP and is responsible for their addition.|||Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. Bacterial CCA-adding enzyme type 1 subfamily.|||Catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. tRNA 3'-terminal CCA addition is required both for tRNA processing and repair. Also involved in tRNA surveillance by mediating tandem CCA addition to generate a CCACCA at the 3' terminus of unstable tRNAs. While stable tRNAs receive only 3'-terminal CCA, unstable tRNAs are marked with CCACCA and rapidly degraded.|||Comprises two domains: an N-terminal domain containing the nucleotidyltransferase activity and a C-terminal HD domain associated with both phosphodiesterase and phosphatase activities.|||Magnesium is required for nucleotidyltransferase activity.|||Monomer. Can also form homodimers and oligomers.|||Nickel for phosphatase activity. http://togogenome.org/gene/2604047:PDMSB3_RS25210 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBP5 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the arginase family.|||Binds 2 manganese ions per subunit.|||Catalyzes the conversion of N-formimidoyl-L-glutamate to L-glutamate and formamide. http://togogenome.org/gene/2604047:PDMSB3_RS04555 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z5X9 ^@ Function|||Subcellular Location Annotation ^@ Cell inner membrane|||Involved in a late step of protoheme IX synthesis.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS18780 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2L9 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL6 family.|||Part of the 50S ribosomal subunit.|||This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center. http://togogenome.org/gene/2604047:PDMSB3_RS13680 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2B2 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the lactate permease family.|||Cell inner membrane|||Membrane|||Uptake of L-lactate across the membrane. Can also transport D-lactate and glycolate. http://togogenome.org/gene/2604047:PDMSB3_RS02505 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z7L1 ^@ Similarity ^@ Belongs to the glutamate synthase family. http://togogenome.org/gene/2604047:PDMSB3_RS25195 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKX7 ^@ Similarity ^@ Belongs to the bacterial solute-binding protein 3 family. http://togogenome.org/gene/2604047:PDMSB3_RS27565 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZTX7 ^@ Similarity ^@ Belongs to the histone deacetylase family. http://togogenome.org/gene/2604047:PDMSB3_RS11315 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZE08 ^@ Similarity ^@ Belongs to the universal stress protein A family. http://togogenome.org/gene/2604047:PDMSB3_RS25180 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YXH6 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS11950 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZD06 ^@ Caution|||Function|||Similarity ^@ Belongs to the NAD-dependent DNA ligase family. LigA subfamily.|||DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS19845 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKE0 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ATPase epsilon chain family.|||Cell membrane|||F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.|||Membrane|||Produces ATP from ADP in the presence of a proton gradient across the membrane. http://togogenome.org/gene/2604047:PDMSB3_RS26915 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCB8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the cytochrome c oxidase subunit 2 family.|||Cell membrane|||Membrane|||Periplasm http://togogenome.org/gene/2604047:PDMSB3_RS27905 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPZ3 ^@ Similarity ^@ Belongs to the ETF beta-subunit/FixA family. http://togogenome.org/gene/2604047:PDMSB3_RS18265 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2K8 ^@ Caution|||Function|||Similarity ^@ Belongs to the UbiX/PAD1 family.|||Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS24315 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZSS3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the MotA family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS02340 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCU9 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn).|||Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS17215 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJ69 ^@ Similarity ^@ Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS02445 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIE0 ^@ Cofactor|||Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PdxA family.|||Binds 1 divalent metal cation per subunit. Can use ions such as Zn(2+), Mg(2+) or Co(2+).|||Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L-threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).|||Cytoplasm|||Homodimer.|||The active site is located at the dimer interface. http://togogenome.org/gene/2604047:PDMSB3_RS26715 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YXP0 ^@ Similarity ^@ Belongs to the DNA glycosylase MPG family. http://togogenome.org/gene/2604047:PDMSB3_RS15265 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YTZ8 ^@ Similarity ^@ Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. http://togogenome.org/gene/2604047:PDMSB3_RS16610 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YW70 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. http://togogenome.org/gene/2604047:PDMSB3_RS28785 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZUB9 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the vitamin-B12 independent methionine synthase family.|||Binds 1 zinc ion per subunit.|||Binds 2 Zn(2+) ions per subunit.|||Catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine resulting in methionine formation. http://togogenome.org/gene/2604047:PDMSB3_RS34885 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWZ7 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. http://togogenome.org/gene/2604047:PDMSB3_RS17225 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZF69 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the MIP/aquaporin (TC 1.A.8) family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS30535 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDL8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS20885 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZF58 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS07775 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZB34 ^@ Cofactor|||Miscellaneous|||Similarity ^@ Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.|||Binds 1 FAD per subunit.|||The active site is a redox-active disulfide bond. http://togogenome.org/gene/2604047:PDMSB3_RS16680 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFZ3 ^@ Caution|||Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the QueG family.|||Binds 2 [4Fe-4S] clusters per monomer.|||Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer. http://togogenome.org/gene/2604047:PDMSB3_RS30460 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWF5 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS32300 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEA7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the methyl-accepting chemotaxis (MCP) protein family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS20740 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZRF8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the methyl-accepting chemotaxis (MCP) protein family.|||Cell inner membrane http://togogenome.org/gene/2604047:PDMSB3_RS19400 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8T8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the FliN/MopA/SpaO family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS09040 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVA5 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS10960 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVI7 ^@ Similarity|||Subcellular Location Annotation ^@ Cell inner membrane|||In the C-terminal section; belongs to the transpeptidase family.|||In the N-terminal section; belongs to the glycosyltransferase 51 family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS02665 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAG6 ^@ Cofactor|||Function ^@ Binds 2 [4Fe-4S] clusters.|||Component of a complex that catalyzes the oxidation of glycolate to glyoxylate. http://togogenome.org/gene/2604047:PDMSB3_RS14470 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBT3 ^@ Function ^@ Member of the two-component regulatory system PhoR/PhoB involved in the phosphate regulon genes expression. PhoR may function as a membrane-associated protein kinase that phosphorylates PhoB in response to environmental signals. http://togogenome.org/gene/2604047:PDMSB3_RS31960 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJX8 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS21525 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVB0 ^@ Subcellular Location Annotation ^@ Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS17155 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUB8 ^@ PTM ^@ Binds 2 heme c groups covalently per subunit. http://togogenome.org/gene/2604047:PDMSB3_RS13985 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z7E0 ^@ Function|||Similarity|||Subunit ^@ Belongs to the bacterial histone-like protein family.|||Heterodimer of an alpha and a beta chain.|||This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. http://togogenome.org/gene/2604047:PDMSB3_RS07710 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCH1 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the RimP family.|||Cytoplasm|||Required for maturation of 30S ribosomal subunits. http://togogenome.org/gene/2604047:PDMSB3_RS15585 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEK9 ^@ Function|||Similarity ^@ Belongs to the GreA/GreB family. GreB subfamily.|||Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length. http://togogenome.org/gene/2604047:PDMSB3_RS07720 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEZ8 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.|||Cytoplasm|||One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex. http://togogenome.org/gene/2604047:PDMSB3_RS25310 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBQ8 ^@ Similarity ^@ Belongs to the DSD1 family. http://togogenome.org/gene/2604047:PDMSB3_RS03865 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1P6 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the urease gamma subunit family.|||Cytoplasm|||Heterotrimer of UreA (gamma), UreB (beta) and UreC (alpha) subunits. Three heterotrimers associate to form the active enzyme. http://togogenome.org/gene/2604047:PDMSB3_RS09580 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFW0 ^@ Similarity ^@ Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS07705 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1Y3 ^@ Similarity ^@ Belongs to the pseudouridine synthase RsuA family. http://togogenome.org/gene/2604047:PDMSB3_RS19865 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWK4 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the ATPase delta chain family.|||Cell membrane|||F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.|||This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction. http://togogenome.org/gene/2604047:PDMSB3_RS08745 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z6G7 ^@ Similarity ^@ Belongs to the DegT/DnrJ/EryC1 family. http://togogenome.org/gene/2604047:PDMSB3_RS19460 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2N3 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Bacterial flagellum basal body|||Belongs to the flagella basal body rod proteins family.|||The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod. The rod consists of about 26 subunits of FlgG in the distal portion, and FlgB, FlgC and FlgF are thought to build up the proximal portion of the rod with about 6 subunits each. http://togogenome.org/gene/2604047:PDMSB3_RS33910 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPK3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS21145 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZHW2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the glycosyl hydrolase 13 family.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS02645 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUF8 ^@ Similarity ^@ Belongs to the Dps family. http://togogenome.org/gene/2604047:PDMSB3_RS17235 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCT5 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the DHBP synthase family.|||Binds 2 divalent metal cations per subunit. Magnesium or manganese.|||Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS13605 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZHQ3 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS14240 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBP8 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS12900 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z295 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the adenylosuccinate synthetase family.|||Binds 1 Mg(2+) ion per subunit.|||Cytoplasm|||Homodimer.|||Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP. http://togogenome.org/gene/2604047:PDMSB3_RS16600 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZP63 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.|||Belongs to the KdsB family.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS05950 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z639 ^@ Similarity ^@ Belongs to the metallophosphoesterase superfamily. YfcE family. http://togogenome.org/gene/2604047:PDMSB3_RS29000 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIP9 ^@ Cofactor|||Similarity|||Subunit ^@ Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family.|||Binds 1 FAD per subunit.|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS13310 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDL1 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the glutamine synthetase family.|||Cytoplasm|||Oligomer of 12 subunits arranged in the form of two hexagons. http://togogenome.org/gene/2604047:PDMSB3_RS25320 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJS7 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS23235 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZSD8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS21220 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIZ6 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.|||Cell inner membrane|||Cell membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane|||Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane. http://togogenome.org/gene/2604047:PDMSB3_RS27320 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YW17 ^@ Similarity ^@ Belongs to the NtaA/SnaA/DszA monooxygenase family. http://togogenome.org/gene/2604047:PDMSB3_RS27605 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPV8 ^@ Similarity ^@ Belongs to the HipA Ser/Thr kinase family. http://togogenome.org/gene/2604047:PDMSB3_RS27555 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZLR0 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.|||Cell inner membrane|||Membrane|||Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons. http://togogenome.org/gene/2604047:PDMSB3_RS30815 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZV08 ^@ Similarity ^@ Belongs to the MotB family. http://togogenome.org/gene/2604047:PDMSB3_RS14165 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEZ3 ^@ Similarity ^@ Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. http://togogenome.org/gene/2604047:PDMSB3_RS23980 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZSN2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS29455 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZLH5 ^@ Similarity ^@ Belongs to the Gfa family. http://togogenome.org/gene/2604047:PDMSB3_RS20755 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZF42 ^@ Similarity ^@ Belongs to the N-acylglucosamine 2-epimerase family. http://togogenome.org/gene/2604047:PDMSB3_RS31910 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YYD6 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the FlhC family.|||Binds 1 zinc ion per subunit.|||Cytoplasm|||Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non-flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways.|||Heterohexamer composed of two FlhC and four FlhD subunits. Each FlhC binds a FlhD dimer, forming a heterotrimer, and a hexamer assembles by dimerization of two heterotrimers. http://togogenome.org/gene/2604047:PDMSB3_RS33970 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZVV5 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS20690 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZRF2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS02660 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YSJ0 ^@ Function|||Similarity ^@ Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.|||Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis. http://togogenome.org/gene/2604047:PDMSB3_RS20095 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z923 ^@ Function|||PTM|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the GSP I family.|||Cell inner membrane|||Cleaved by prepilin peptidase.|||Component of the type II secretion system required for the energy-dependent secretion of extracellular factors such as proteases and toxins from the periplasm.|||Membrane|||Type II secretion is composed of four main components: the outer membrane complex, the inner membrane complex, the cytoplasmic secretion ATPase and the periplasm-spanning pseudopilus. http://togogenome.org/gene/2604047:PDMSB3_RS23005 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZG13 ^@ Similarity ^@ Belongs to the HisA/HisF family. http://togogenome.org/gene/2604047:PDMSB3_RS00455 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YSC7 ^@ Caution ^@ Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS26705 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZTP2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS00535 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZHM7 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the QueC family.|||Binds 1 zinc ion per subunit.|||Catalyzes the ATP-dependent conversion of 7-carboxy-7-deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). http://togogenome.org/gene/2604047:PDMSB3_RS16440 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2H0 ^@ Cofactor ^@ Binds 1 Mg(2+) or Mn(2+) ion per subunit. http://togogenome.org/gene/2604047:PDMSB3_RS34225 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z3S9 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS08945 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z9R9 ^@ Function|||Similarity ^@ Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily.|||Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA. http://togogenome.org/gene/2604047:PDMSB3_RS16780 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIZ4 ^@ Similarity ^@ Belongs to the SorC transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS14620 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBV4 ^@ Similarity ^@ Belongs to the SCO1/2 family. http://togogenome.org/gene/2604047:PDMSB3_RS00015 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z5J6 ^@ Cofactor|||Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation|||Subunit ^@ A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.|||Belongs to the type II topoisomerase GyrB family.|||Binds two Mg(2+) per subunit. The magnesium ions form salt bridges with both the protein and the DNA. Can also accept other divalent metal cations, such as Mn(2+) or Ca(2+).|||Cytoplasm|||Few gyrases are as efficient as E.coli at forming negative supercoils. Not all organisms have 2 type II topoisomerases; in organisms with a single type II topoisomerase this enzyme also has to decatenate newly replicated chromosomes.|||Heterotetramer, composed of two GyrA and two GyrB chains. In the heterotetramer, GyrA contains the active site tyrosine that forms a transient covalent intermediate with DNA, while GyrB binds cofactors and catalyzes ATP hydrolysis. http://togogenome.org/gene/2604047:PDMSB3_RS16945 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2I1 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the SUA5 family.|||Cytoplasm|||Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. http://togogenome.org/gene/2604047:PDMSB3_RS09010 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZD08 ^@ Similarity ^@ Belongs to the trans-sulfuration enzymes family. http://togogenome.org/gene/2604047:PDMSB3_RS15115 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZC19 ^@ Function|||Similarity ^@ Belongs to the DadA oxidoreductase family.|||Oxidative deamination of D-amino acids. http://togogenome.org/gene/2604047:PDMSB3_RS12930 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZMR6 ^@ Function|||Similarity|||Subunit ^@ Belongs to the Hfq family.|||Homohexamer.|||RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. http://togogenome.org/gene/2604047:PDMSB3_RS13765 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YTP7 ^@ Similarity ^@ Belongs to the dihydropyrimidine dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS33785 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZVU0 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS18790 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZH39 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS14 family.|||Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.|||Part of the 30S ribosomal subunit. Contacts proteins S3 and S10. http://togogenome.org/gene/2604047:PDMSB3_RS30010 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWD6 ^@ PTM|||Subcellular Location Annotation ^@ Covalently binds the prosthetic group of malonate decarboxylase.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS31905 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZMK5 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the FlhD family.|||Cytoplasm|||Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non-flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways.|||Homodimer; disulfide-linked. Forms a heterohexamer composed of two FlhC and four FlhD subunits. Each FlhC binds a FlhD dimer, forming a heterotrimer, and a hexamer assembles by dimerization of two heterotrimers.|||The C-terminal region contains a putative helix-turn-helix (HTH) motif, suggesting that this region may bind DNA. http://togogenome.org/gene/2604047:PDMSB3_RS15195 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEG1 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the LapB family.|||Cell inner membrane|||Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane. http://togogenome.org/gene/2604047:PDMSB3_RS18395 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGY1 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TatA/E family.|||Cell membrane|||Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.|||The Tat system comprises two distinct complexes: a TatABC complex, containing multiple copies of TatA, TatB and TatC subunits, and a separate TatA complex, containing only TatA subunits. Substrates initially bind to the TatABC complex, which probably triggers association of the separate TatA complex to form the active translocon. http://togogenome.org/gene/2604047:PDMSB3_RS30055 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZN47 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS28490 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZI95 ^@ Similarity ^@ Belongs to the glycosyl hydrolase 13 family. http://togogenome.org/gene/2604047:PDMSB3_RS26685 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZLK7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS23265 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZK41 ^@ Similarity ^@ Belongs to the NtaA/SnaA/DszA monooxygenase family. http://togogenome.org/gene/2604047:PDMSB3_RS04360 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z9Q5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS22470 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFU7 ^@ Similarity ^@ Belongs to the PrpD family. http://togogenome.org/gene/2604047:PDMSB3_RS12165 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z278 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS17930 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJH2 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the SecA family.|||Cell membrane|||Cytoplasm|||Monomer and homodimer. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF-YajC and YidC.|||Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. http://togogenome.org/gene/2604047:PDMSB3_RS21795 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2Y1 ^@ Similarity ^@ Belongs to the thiolase-like superfamily. Thiolase family. http://togogenome.org/gene/2604047:PDMSB3_RS26030 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZTF1 ^@ Similarity ^@ Belongs to the DapA family. http://togogenome.org/gene/2604047:PDMSB3_RS24600 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKF8 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the quinone-dependent D-lactate dehydrogenase family.|||Catalyzes the oxidation of D-lactate to pyruvate.|||Cell inner membrane http://togogenome.org/gene/2604047:PDMSB3_RS28790 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZL86 ^@ Similarity ^@ Belongs to the precorrin methyltransferase family. http://togogenome.org/gene/2604047:PDMSB3_RS05775 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJS8 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the MscS (TC 1.A.23) family.|||Cell inner membrane|||Homoheptamer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Mechanosensitive channel that participates in the regulation of osmotic pressure changes within the cell, opening in response to stretch forces in the membrane lipid bilayer, without the need for other proteins. Contributes to normal resistance to hypoosmotic shock. Forms an ion channel of 1.0 nanosiemens conductance with a slight preference for anions.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS30810 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDQ6 ^@ Similarity ^@ Belongs to the Gfa family. http://togogenome.org/gene/2604047:PDMSB3_RS12265 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZH40 ^@ Similarity ^@ Belongs to the inositol monophosphatase superfamily. http://togogenome.org/gene/2604047:PDMSB3_RS16655 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YW72 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PlsY family.|||Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.|||Cell membrane|||Probably interacts with PlsX. http://togogenome.org/gene/2604047:PDMSB3_RS19060 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZH05 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily.|||Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS10735 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDS9 ^@ Similarity ^@ Belongs to the UPF0229 family. http://togogenome.org/gene/2604047:PDMSB3_RS08535 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z6F6 ^@ Function|||Similarity ^@ Belongs to the APS kinase family.|||Catalyzes the synthesis of activated sulfate. http://togogenome.org/gene/2604047:PDMSB3_RS35050 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZW38 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS04015 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDH1 ^@ Similarity ^@ Belongs to the precorrin methyltransferase family. http://togogenome.org/gene/2604047:PDMSB3_RS25900 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YXK5 ^@ Similarity ^@ Belongs to the ABC transporter superfamily. http://togogenome.org/gene/2604047:PDMSB3_RS32405 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YYF7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS21070 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YV88 ^@ Similarity ^@ Belongs to the N(4)/N(6)-methyltransferase family. http://togogenome.org/gene/2604047:PDMSB3_RS16625 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZG72 ^@ Function|||Similarity ^@ Belongs to the bacterial ribosomal protein bS20 family.|||Binds directly to 16S ribosomal RNA. http://togogenome.org/gene/2604047:PDMSB3_RS21000 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZRJ5 ^@ Cofactor|||Function|||Subcellular Location Annotation|||Subunit ^@ Membrane|||Membrane-anchoring subunit of succinate dehydrogenase (SDH).|||Part of an enzyme complex containing four subunits: a flavoprotein, an iron-sulfur protein, plus two membrane-anchoring proteins, SdhC and SdhD.|||The heme is bound between the two transmembrane subunits. http://togogenome.org/gene/2604047:PDMSB3_RS07465 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCA4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ammonia transporter channel (TC 1.A.11.2) family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS35635 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YX30 ^@ Similarity ^@ Belongs to the DNA/RNA non-specific endonuclease family. http://togogenome.org/gene/2604047:PDMSB3_RS22610 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZMU1 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS14610 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZE67 ^@ Function|||Similarity|||Subunit ^@ Belongs to the glycosyltransferase 20 family.|||Homotetramer.|||Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-alpha-D-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor. http://togogenome.org/gene/2604047:PDMSB3_RS12975 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZMS7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the BI1 family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS15155 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEF7 ^@ Similarity ^@ Belongs to the enoyl-CoA hydratase/isomerase family. http://togogenome.org/gene/2604047:PDMSB3_RS20995 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZA44 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the cytochrome b560 family.|||Membrane-anchoring subunit of succinate dehydrogenase (SDH).|||Part of an enzyme complex containing four subunits: a flavoprotein, an iron-sulfur protein, plus two membrane-anchoring proteins, SdhC and SdhD. The complex can form homotrimers.|||The heme is bound between the two transmembrane subunits. http://togogenome.org/gene/2604047:PDMSB3_RS00600 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z755 ^@ Function|||Similarity|||Subunit ^@ Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln).|||Belongs to the GatB/GatE family. GatB subfamily.|||Heterotrimer of A, B and C subunits. http://togogenome.org/gene/2604047:PDMSB3_RS27135 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z396 ^@ Similarity ^@ Belongs to the ETF alpha-subunit/FixB family. http://togogenome.org/gene/2604047:PDMSB3_RS14685 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YTV3 ^@ Similarity ^@ Belongs to the UPF0337 (CsbD) family. http://togogenome.org/gene/2604047:PDMSB3_RS31945 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZVD5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS06425 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEG0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ExbD/TolR family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS18010 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUG1 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the FtsL family.|||Cell inner membrane|||Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.|||Membrane|||Part of a complex composed of FtsB, FtsL and FtsQ. http://togogenome.org/gene/2604047:PDMSB3_RS14545 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z7I8 ^@ Similarity|||Subunit ^@ Belongs to the CarA family.|||Composed of two chains; the small (or glutamine) chain promotes the hydrolysis of glutamine to ammonia, which is used by the large (or ammonia) chain to synthesize carbamoyl phosphate. http://togogenome.org/gene/2604047:PDMSB3_RS32060 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNZ2 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the 3-hydroxyacyl-CoA dehydrogenase family. L-carnitine dehydrogenase subfamily.|||Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3-dehydrocarnitine.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS05655 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1T8 ^@ Similarity ^@ Belongs to the DEAD box helicase family. http://togogenome.org/gene/2604047:PDMSB3_RS15380 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIF6 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the DsbB family.|||Cell inner membrane|||Cell membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane|||Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein. http://togogenome.org/gene/2604047:PDMSB3_RS02365 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z7J7 ^@ Similarity ^@ Belongs to the acyl-CoA dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS17890 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPL7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the GSP F family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS05520 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1T5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS13750 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVV5 ^@ Similarity ^@ Belongs to the bacterial solute-binding protein 3 family. http://togogenome.org/gene/2604047:PDMSB3_RS01525 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZA34 ^@ Function|||Similarity ^@ Belongs to the peptidase S11 family.|||Removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors. http://togogenome.org/gene/2604047:PDMSB3_RS24055 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKF7 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS14890 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZI97 ^@ Function ^@ Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. http://togogenome.org/gene/2604047:PDMSB3_RS11855 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZMA4 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the transferase hexapeptide repeat family. LpxA subfamily.|||Cytoplasm|||Homotrimer.|||Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. http://togogenome.org/gene/2604047:PDMSB3_RS16430 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YW62 ^@ Function|||Similarity|||Subunit ^@ Belongs to the ClpS family.|||Binds to the N-terminal domain of the chaperone ClpA.|||Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation. http://togogenome.org/gene/2604047:PDMSB3_RS26225 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YXL7 ^@ Caution|||Function|||Similarity ^@ Belongs to the glucose-6-phosphate dehydrogenase family.|||Catalyzes the oxidation of glucose 6-phosphate to 6-phosphogluconolactone.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS11805 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGX2 ^@ Similarity ^@ Belongs to the UPF0125 (RnfH) family. http://togogenome.org/gene/2604047:PDMSB3_RS09395 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZD68 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Cytoplasm|||In the N-terminal section; belongs to the FGAMS family.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer.|||Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. http://togogenome.org/gene/2604047:PDMSB3_RS27600 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZLR7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS24450 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z339 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the NlpA lipoprotein family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS00490 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YU39 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the polypeptide deformylase family.|||Binds 1 Fe(2+) ion.|||Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. http://togogenome.org/gene/2604047:PDMSB3_RS11525 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGT3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS28200 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZI58 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the FtsA/MreB family.|||Cytoplasm|||Forms membrane-associated dynamic filaments that are essential for cell shape determination. Acts by regulating cell wall synthesis and cell elongation, and thus cell shape. A feedback loop between cell geometry and MreB localization may maintain elongated cell shape by targeting cell wall growth to regions of negative cell wall curvature.|||Forms polymers.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS02925 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z989 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the CpoB family.|||Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division.|||Periplasm http://togogenome.org/gene/2604047:PDMSB3_RS16445 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YU78 ^@ Similarity ^@ Belongs to the pseudouridine synthase RsuA family. http://togogenome.org/gene/2604047:PDMSB3_RS00265 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z733 ^@ Similarity ^@ Belongs to the DEAD box helicase family. http://togogenome.org/gene/2604047:PDMSB3_RS36900 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YV01 ^@ Similarity ^@ Belongs to the IS21/IS1162 putative ATP-binding protein family. http://togogenome.org/gene/2604047:PDMSB3_RS17080 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YW89 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS33010 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKD4 ^@ Similarity ^@ Belongs to the universal stress protein A family. http://togogenome.org/gene/2604047:PDMSB3_RS02190 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YSH7 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS23845 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZB73 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS16930 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZF36 ^@ Similarity ^@ Belongs to the peptidase S13 family. http://togogenome.org/gene/2604047:PDMSB3_RS14540 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZI43 ^@ Caution|||Cofactor|||Similarity|||Subunit ^@ Belongs to the CarB family.|||Binds 4 Mg(2+) or Mn(2+) ions per subunit.|||Composed of two chains; the small (or glutamine) chain promotes the hydrolysis of glutamine to ammonia, which is used by the large (or ammonia) chain to synthesize carbamoyl phosphate.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS33820 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZP81 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS01125 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZHX0 ^@ Similarity ^@ Belongs to the methyl-accepting chemotaxis (MCP) protein family. http://togogenome.org/gene/2604047:PDMSB3_RS09325 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z9X1 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the peptidase S14 family.|||Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins.|||Cytoplasm|||Fourteen ClpP subunits assemble into 2 heptameric rings which stack back to back to give a disk-like structure with a central cavity, resembling the structure of eukaryotic proteasomes. http://togogenome.org/gene/2604047:PDMSB3_RS05410 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJL9 ^@ Cofactor|||Similarity ^@ Belongs to the rubredoxin family.|||Binds 1 Fe(3+) ion per subunit. http://togogenome.org/gene/2604047:PDMSB3_RS17375 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZF89 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL13 family.|||Part of the 50S ribosomal subunit.|||This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. http://togogenome.org/gene/2604047:PDMSB3_RS12245 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAY6 ^@ Caution|||Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the LpxH family.|||Belongs to the metallophosphoesterase superfamily. YfcE family.|||Binds 2 Mn(2+) ions per subunit in a binuclear metal center.|||Cell inner membrane|||Hydrolyzes the pyrophosphate bond of UDP-2,3-diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS24075 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZSP2 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the CoA-transferase III family. Frc subfamily.|||Homodimer.|||Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS04185 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z819 ^@ Cofactor|||Function|||PTM|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PanD family.|||Binds 1 pyruvoyl group covalently per subunit.|||Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.|||Cytoplasm|||Heterooctamer of four alpha and four beta subunits.|||Is synthesized initially as an inactive proenzyme, which is activated by self-cleavage at a specific serine bond to produce a beta-subunit with a hydroxyl group at its C-terminus and an alpha-subunit with a pyruvoyl group at its N-terminus. http://togogenome.org/gene/2604047:PDMSB3_RS23325 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZN46 ^@ Similarity ^@ Belongs to the small heat shock protein (HSP20) family. http://togogenome.org/gene/2604047:PDMSB3_RS18470 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPT9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ABC-2 integral membrane protein family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS21080 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIX4 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Acetyl-CoA carboxylase is a heterohexamer composed of biotin carboxyl carrier protein (AccB), biotin carboxylase (AccC) and two subunits each of ACCase subunit alpha (AccA) and ACCase subunit beta (AccD).|||Belongs to the AccD/PCCB family.|||Binds 1 zinc ion per subunit.|||Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS12075 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZH12 ^@ Cofactor ^@ Can also use Mn(2+) ion. http://togogenome.org/gene/2604047:PDMSB3_RS09015 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCX0 ^@ Similarity ^@ Belongs to the HAD-like hydrolase superfamily. SerB family. http://togogenome.org/gene/2604047:PDMSB3_RS17665 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2J6 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS12955 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YTJ9 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the IspG family.|||Binds 1 [4Fe-4S] cluster.|||Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. http://togogenome.org/gene/2604047:PDMSB3_RS21630 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZMD6 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS34380 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZVY9 ^@ Similarity ^@ Belongs to the 3-hydroxyacyl-CoA dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS29830 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZUQ4 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS35740 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPY4 ^@ Similarity ^@ Belongs to the terpene cyclase/mutase family. http://togogenome.org/gene/2604047:PDMSB3_RS19780 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2P0 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the GcvH family.|||Binds 1 lipoyl cofactor covalently.|||The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.|||The glycine cleavage system is composed of four proteins: P, T, L and H. http://togogenome.org/gene/2604047:PDMSB3_RS11505 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z264 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the acetate uptake transporter (AceTr) (TC 2.A.96) family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS22145 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJM7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the bacterial solute-binding protein SsuA/TauA family.|||Periplasm http://togogenome.org/gene/2604047:PDMSB3_RS20985 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YV83 ^@ Function|||Similarity ^@ Belongs to the LDH/MDH superfamily. MDH type 2 family.|||Catalyzes the reversible oxidation of malate to oxaloacetate. http://togogenome.org/gene/2604047:PDMSB3_RS19415 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWI5 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Bacterial flagellum basal body|||Belongs to the FliQ/MopD/SpaQ family.|||Cell membrane|||Membrane|||Role in flagellar biosynthesis. http://togogenome.org/gene/2604047:PDMSB3_RS06450 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8X4 ^@ Function|||Similarity|||Subunit ^@ Belongs to the bacterioferritin family.|||Iron-storage protein.|||Oligomer of 24 subunits, arranged as 12 dimers, that are packed together to form an approximately spherical molecule with a central cavity, in which large amounts of iron can be deposited. http://togogenome.org/gene/2604047:PDMSB3_RS09330 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z217 ^@ Function|||Similarity|||Subunit ^@ ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.|||Belongs to the ClpX chaperone family.|||Component of the ClpX-ClpP complex. Forms a hexameric ring that, in the presence of ATP, binds to fourteen ClpP subunits assembled into a disk-like structure with a central cavity, resembling the structure of eukaryotic proteasomes. http://togogenome.org/gene/2604047:PDMSB3_RS23970 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZND6 ^@ Similarity ^@ Belongs to the AAA ATPase family. http://togogenome.org/gene/2604047:PDMSB3_RS18835 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZH46 ^@ Function|||Similarity ^@ Belongs to the universal ribosomal protein uS19 family.|||Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. http://togogenome.org/gene/2604047:PDMSB3_RS02450 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z938 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. RsmA subfamily.|||Cytoplasm|||Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. http://togogenome.org/gene/2604047:PDMSB3_RS01875 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z7F4 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PagL family.|||Cell outer membrane|||Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety.|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS06110 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1U8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the complex I subunit 5 family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS10445 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCD0 ^@ Caution|||Function|||Similarity ^@ Belongs to the UbiX/PAD1 family.|||Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS20575 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIX3 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS19525 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZHE3 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the GTP-binding SRP family.|||Cell membrane|||Membrane|||Necessary for flagellar biosynthesis. May be involved in translocation of the flagellum. http://togogenome.org/gene/2604047:PDMSB3_RS24460 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKM3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the bacterial solute-binding protein 3 family.|||Periplasm http://togogenome.org/gene/2604047:PDMSB3_RS02240 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAB7 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS06475 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z662 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the bacterial secretin family. T3SS SctC subfamily.|||Cell outer membrane|||Component of the type III secretion system (T3SS), also called injectisome, which is used to inject bacterial effector proteins into eukaryotic host cells. Forms a ring-shaped multimeric structure with an apparent central pore in the outer membrane.|||The core secretion machinery of the T3SS is composed of approximately 20 different proteins, including cytoplasmic components, a base, an export apparatus and a needle. This subunit is part of the base, which anchors the injectisome in the bacterial cell envelope. Forms a stable homooligomeric complex. http://togogenome.org/gene/2604047:PDMSB3_RS29515 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIW3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS02760 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAH6 ^@ Cofactor|||Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the DnaJ family.|||Binds 2 Zn(2+) ions per monomer.|||Cytoplasm|||Homodimer.|||Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.|||The J domain is necessary and sufficient to stimulate DnaK ATPase activity. Zinc center 1 plays an important role in the autonomous, DnaK-independent chaperone activity of DnaJ. Zinc center 2 is essential for interaction with DnaK and for DnaJ activity. http://togogenome.org/gene/2604047:PDMSB3_RS28885 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZUC8 ^@ Similarity ^@ Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. http://togogenome.org/gene/2604047:PDMSB3_RS18290 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFM2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS28800 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIM0 ^@ Function|||Similarity ^@ Belongs to the CbiD family.|||Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. http://togogenome.org/gene/2604047:PDMSB3_RS10410 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z240 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS32620 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZRQ1 ^@ Similarity ^@ Belongs to the outer membrane factor (OMF) (TC 1.B.17) family. http://togogenome.org/gene/2604047:PDMSB3_RS07755 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCH9 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ A 50S ribosomal subunit assembly protein with GTPase activity, required for 50S subunit assembly at low temperatures, may also play a role in translation. Binds GTP and analogs. Binds the 70S ribosome between the 30S and 50S subunits, in a similar position as ribosome-bound EF-G; it contacts a number of ribosomal proteins, both rRNAs and the A-site tRNA.|||Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. BipA subfamily.|||Cytoplasm|||Monomer. http://togogenome.org/gene/2604047:PDMSB3_RS13995 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDW8 ^@ Cofactor|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.|||Binds 2 magnesium ions per tetramer.|||Cytoplasm|||Tetramer of two alpha and two beta subunits. http://togogenome.org/gene/2604047:PDMSB3_RS12905 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YTJ5 ^@ Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-II aminoacyl-tRNA synthetase family. HisZ subfamily.|||Cytoplasm|||Heteromultimer composed of HisG and HisZ subunits.|||Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.|||This function is generally fulfilled by the C-terminal part of HisG, which is missing in some bacteria such as this one. http://togogenome.org/gene/2604047:PDMSB3_RS07185 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAU3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS04425 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1Q9 ^@ Function|||Similarity ^@ Belongs to the AAA ATPase family. RarA/MGS1/WRNIP1 subfamily.|||DNA-dependent ATPase that plays important roles in cellular responses to stalled DNA replication processes. http://togogenome.org/gene/2604047:PDMSB3_RS14480 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YTU0 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PhoU family.|||Cytoplasm|||Homodimer.|||Plays a role in the regulation of phosphate uptake. http://togogenome.org/gene/2604047:PDMSB3_RS00775 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z9T8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response.|||Belongs to the SrkA/RdoA protein kinase family.|||Cytoplasm|||Monomer. http://togogenome.org/gene/2604047:PDMSB3_RS34460 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZVZ8 ^@ Similarity ^@ Belongs to the acyl coenzyme A hydrolase family. http://togogenome.org/gene/2604047:PDMSB3_RS16340 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCG8 ^@ Similarity ^@ Belongs to the UPF0758 family. http://togogenome.org/gene/2604047:PDMSB3_RS30435 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZUW5 ^@ Similarity ^@ Belongs to the bacterial histone-like protein family. http://togogenome.org/gene/2604047:PDMSB3_RS35510 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFJ4 ^@ Function ^@ The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. http://togogenome.org/gene/2604047:PDMSB3_RS06865 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1W4 ^@ Function|||Similarity|||Subunit ^@ Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.|||Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose.|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS16395 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2G9 ^@ Cofactor|||Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.|||Binds 1 zinc ion per subunit.|||Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile).|||Cytoplasm|||IleRS has two distinct active sites: one for aminoacylation and one for editing. The misactivated valine is translocated from the active site to the editing site, which sterically excludes the correctly activated isoleucine. The single editing site contains two valyl binding pockets, one specific for each substrate (Val-AMP or Val-tRNA(Ile)).|||Monomer. http://togogenome.org/gene/2604047:PDMSB3_RS13050 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YTK4 ^@ Activity Regulation|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the enolase family.|||Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.|||Cell surface|||Cytoplasm|||Secreted|||The covalent binding to the substrate causes inactivation of the enzyme, and possibly serves as a signal for the export of the protein. http://togogenome.org/gene/2604047:PDMSB3_RS18445 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUI3 ^@ Similarity|||Subunit ^@ Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS23890 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZSM0 ^@ Similarity ^@ Belongs to the citrate synthase family. http://togogenome.org/gene/2604047:PDMSB3_RS18145 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGK4 ^@ Similarity ^@ Belongs to the TrpC family. http://togogenome.org/gene/2604047:PDMSB3_RS07770 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKL7 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the 2-oxoacid dehydrogenase family.|||Binds 1 lipoyl cofactor covalently.|||E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2-oxoglutarate to succinyl-CoA and CO(2). http://togogenome.org/gene/2604047:PDMSB3_RS18180 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2K6 ^@ Function|||Similarity ^@ ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.|||Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. YchF/OLA1 subfamily. http://togogenome.org/gene/2604047:PDMSB3_RS11860 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCZ0 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the thioester dehydratase family. FabZ subfamily.|||Cytoplasm|||Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. http://togogenome.org/gene/2604047:PDMSB3_RS28480 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZL42 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the autoinducer-2 exporter (AI-2E) (TC 2.A.86) family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS21030 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIW7 ^@ Similarity ^@ Belongs to the EcnA/EcnB lipoprotein family. http://togogenome.org/gene/2604047:PDMSB3_RS09565 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z222 ^@ Similarity ^@ Belongs to the mannose-6-phosphate isomerase type 2 family. http://togogenome.org/gene/2604047:PDMSB3_RS13005 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEN9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the peptidase M50B family.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS18040 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFJ0 ^@ Similarity ^@ Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. http://togogenome.org/gene/2604047:PDMSB3_RS16360 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFU8 ^@ Function|||Similarity ^@ Belongs to the NadC/ModD family.|||Involved in the catabolism of quinolinic acid (QA). http://togogenome.org/gene/2604047:PDMSB3_RS14425 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVY2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS17685 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJD9 ^@ Similarity ^@ Belongs to the KHG/KDPG aldolase family. http://togogenome.org/gene/2604047:PDMSB3_RS03020 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z9A1 ^@ Similarity ^@ Belongs to the acyl-CoA dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS24690 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNM9 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS09595 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBY8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the etk/wzc family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS29640 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZUK8 ^@ Similarity ^@ Belongs to the UPF0057 (PMP3) family. http://togogenome.org/gene/2604047:PDMSB3_RS26280 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z378 ^@ Function|||Similarity ^@ Belongs to the ClpA/ClpB family.|||Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE. Acts before DnaK, in the processing of protein aggregates. Protein binding stimulates the ATPase activity; ATP hydrolysis unfolds the denatured protein aggregates, which probably helps expose new hydrophobic binding sites on the surface of ClpB-bound aggregates, contributing to the solubilization and refolding of denatured protein aggregates by DnaK. http://togogenome.org/gene/2604047:PDMSB3_RS11240 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZM16 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the LemA family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS25825 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZL69 ^@ Similarity ^@ Belongs to the YoeB family. http://togogenome.org/gene/2604047:PDMSB3_RS25065 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZT30 ^@ Similarity ^@ Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. http://togogenome.org/gene/2604047:PDMSB3_RS23770 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z324 ^@ Similarity ^@ Belongs to the acetaldehyde dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS27875 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YXU6 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the HesB/IscA family.|||Binds 1 iron-sulfur cluster per subunit.|||Homodimer.|||Required for insertion of 4Fe-4S clusters. http://togogenome.org/gene/2604047:PDMSB3_RS18740 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGV8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS13 family.|||Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites.|||Part of the 30S ribosomal subunit. Forms a loose heterodimer with protein S19. Forms two bridges to the 50S subunit in the 70S ribosome. http://togogenome.org/gene/2604047:PDMSB3_RS16295 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2G7 ^@ Caution|||Cofactor|||Miscellaneous|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.|||Binds 1 pyridoxal phosphate per subunit.|||Cytoplasm|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||May also have succinyldiaminopimelate aminotransferase activity, thus carrying out the corresponding step in lysine biosynthesis. http://togogenome.org/gene/2604047:PDMSB3_RS13125 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZMU9 ^@ Similarity ^@ Belongs to the adrenodoxin/putidaredoxin family. http://togogenome.org/gene/2604047:PDMSB3_RS16435 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCI3 ^@ Subcellular Location Annotation ^@ Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS11365 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZE15 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the ATPase C chain family.|||Cell membrane|||F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.|||Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS08395 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z6E9 ^@ Similarity ^@ Belongs to the UPF0303 family. http://togogenome.org/gene/2604047:PDMSB3_RS13525 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZN15 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TRAP transporter large permease family.|||Cell inner membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane|||Part of the tripartite ATP-independent periplasmic (TRAP) transport system.|||The complex comprises the extracytoplasmic solute receptor protein and the two transmembrane proteins. http://togogenome.org/gene/2604047:PDMSB3_RS14505 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNF3 ^@ Cofactor|||Function|||PTM|||Similarity ^@ Activated by phosphorylation.|||Belongs to the phosphohexose mutase family.|||Binds 1 Mg(2+) ion per subunit.|||Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate. http://togogenome.org/gene/2604047:PDMSB3_RS07325 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZC87 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS30605 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z3I0 ^@ Similarity ^@ In the C-terminal section; belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. http://togogenome.org/gene/2604047:PDMSB3_RS17990 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFI3 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the glycosyltransferase 4 family. MraY subfamily.|||Catalyzes the initial step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan: transfers peptidoglycan precursor phospho-MurNAc-pentapeptide from UDP-MurNAc-pentapeptide onto the lipid carrier undecaprenyl phosphate, yielding undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide, known as lipid I.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS08670 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YT26 ^@ Function|||Similarity ^@ Belongs to the bacterial ribosomal protein bS6 family.|||Binds together with bS18 to 16S ribosomal RNA. http://togogenome.org/gene/2604047:PDMSB3_RS00010 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZC01 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the beta sliding clamp family.|||Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication as well as for processivity of DNA replication.|||Cytoplasm|||Forms a ring-shaped head-to-tail homodimer around DNA. http://togogenome.org/gene/2604047:PDMSB3_RS20370 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZLQ7 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the zinc-containing alcohol dehydrogenase family.|||Binds 2 Zn(2+) ions per subunit.|||Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate.|||Cytoplasm|||Homotetramer. http://togogenome.org/gene/2604047:PDMSB3_RS34375 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZF32 ^@ Similarity ^@ Belongs to the thiolase-like superfamily. Thiolase family. http://togogenome.org/gene/2604047:PDMSB3_RS29675 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZQM7 ^@ Similarity ^@ Belongs to the zinc-containing alcohol dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS33150 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKF5 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS23780 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKB8 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS09730 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z6M6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS10280 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDF0 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS22955 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZG07 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the radical SAM superfamily. PqqE family.|||Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.|||Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).|||Interacts with PqqD. The interaction is necessary for activity of PqqE. http://togogenome.org/gene/2604047:PDMSB3_RS10870 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGI9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the UPF0324 family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS18800 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJW4 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL24 family.|||One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.|||One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.|||Part of the 50S ribosomal subunit. http://togogenome.org/gene/2604047:PDMSB3_RS35095 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZW40 ^@ Similarity ^@ Belongs to the YciI family. http://togogenome.org/gene/2604047:PDMSB3_RS18875 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2M1 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS7 family.|||One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA.|||Part of the 30S ribosomal subunit. Contacts proteins S9 and S11. http://togogenome.org/gene/2604047:PDMSB3_RS14045 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZN87 ^@ Similarity ^@ Belongs to the 3-oxoacid CoA-transferase subunit A family. http://togogenome.org/gene/2604047:PDMSB3_RS17945 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFH7 ^@ Function|||Similarity ^@ Belongs to the peroxiredoxin family. Prx5 subfamily.|||Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. http://togogenome.org/gene/2604047:PDMSB3_RS22875 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVH1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the GtrA family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS08950 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z209 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the BamD family.|||Cell outer membrane|||Part of the Bam complex.|||Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. http://togogenome.org/gene/2604047:PDMSB3_RS19080 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFY3 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the NAGSA dehydrogenase family. Type 2 subfamily.|||Catalyzes the NADPH-dependent reduction of N-acetyl-5-glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS22715 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZS76 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS30965 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z3J1 ^@ Similarity ^@ Belongs to the DapA family. http://togogenome.org/gene/2604047:PDMSB3_RS34095 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPB3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS21770 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAE6 ^@ Cofactor|||Similarity ^@ Belongs to the ETF alpha-subunit/FixB family.|||Binds 1 FAD per dimer. http://togogenome.org/gene/2604047:PDMSB3_RS16965 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJ30 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the class II fructose-bisphosphate aldolase family.|||Binds 2 Zn(2+) ions per subunit. One is catalytic and the other provides a structural contribution.|||Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.|||One is catalytic and the other provides a structural contribution. http://togogenome.org/gene/2604047:PDMSB3_RS26565 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZC74 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS24095 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z331 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS26160 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZC18 ^@ Cofactor|||Similarity ^@ Belongs to the Fur family.|||Binds 1 Mn(2+) or Fe(2+) ion per subunit.|||Binds 1 zinc ion per subunit. http://togogenome.org/gene/2604047:PDMSB3_RS19835 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZHJ6 ^@ Similarity ^@ Belongs to the bacterial solute-binding protein 3 family. http://togogenome.org/gene/2604047:PDMSB3_RS26670 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZHL6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS20650 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZHM6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the fimbrial export usher family.|||Cell outer membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS23700 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZB53 ^@ Subcellular Location Annotation ^@ Cell inner membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS14770 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBX4 ^@ Function|||PTM|||Similarity|||Subcellular Location Annotation ^@ 4'-phosphopantetheine is transferred from CoA to a specific serine of apo-ACP by AcpS. This modification is essential for activity because fatty acids are bound in thioester linkage to the sulfhydryl of the prosthetic group.|||4'-phosphopantetheine is transferred from CoA to a specific serine of apo-ACP by acpS.|||Belongs to the acyl carrier protein (ACP) family.|||Carrier of the growing fatty acid chain in fatty acid biosynthesis.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS14845 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZI90 ^@ Caution|||Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the MobA family.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer.|||The N-terminal domain determines nucleotide recognition and specific binding, while the C-terminal domain determines the specific binding to the target protein.|||Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor. http://togogenome.org/gene/2604047:PDMSB3_RS09315 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZL87 ^@ Similarity ^@ Belongs to the glycerate kinase type-1 family. http://togogenome.org/gene/2604047:PDMSB3_RS14390 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBR6 ^@ Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation ^@ Bacitracin is thought to be involved in the inhibition of peptidoglycan synthesis by sequestering undecaprenyl diphosphate, thereby reducing the pool of lipid carrier available.|||Belongs to the UppP family.|||Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS12255 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YTG1 ^@ Similarity ^@ Belongs to the transferase hexapeptide repeat family. http://togogenome.org/gene/2604047:PDMSB3_RS16745 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZP78 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the Cyclase 1 superfamily. KynB family.|||Binds 2 zinc ions per subunit.|||Catalyzes the hydrolysis of N-formyl-L-kynurenine to L-kynurenine, the second step in the kynurenine pathway of tryptophan degradation.|||Homodimer. http://togogenome.org/gene/2604047:PDMSB3_RS24225 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJC1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the methyl-accepting chemotaxis (MCP) protein family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS32875 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKB3 ^@ Function|||Similarity|||Subunit ^@ Belongs to the polyphosphate kinase 2 (PPK2) family. Class I subfamily.|||Homotetramer.|||Uses inorganic polyphosphate (polyP) as a donor to convert GDP to GTP or ADP to ATP. http://togogenome.org/gene/2604047:PDMSB3_RS02250 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z5R1 ^@ Similarity ^@ Belongs to the DSD1 family. http://togogenome.org/gene/2604047:PDMSB3_RS10265 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z237 ^@ Similarity ^@ Belongs to the intradiol ring-cleavage dioxygenase family. http://togogenome.org/gene/2604047:PDMSB3_RS15995 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z7V4 ^@ Similarity ^@ Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. http://togogenome.org/gene/2604047:PDMSB3_RS06835 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZC20 ^@ Similarity ^@ Belongs to the peptidase U62 family. http://togogenome.org/gene/2604047:PDMSB3_RS18860 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFV3 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS10 family.|||Involved in the binding of tRNA to the ribosomes.|||Part of the 30S ribosomal subunit. http://togogenome.org/gene/2604047:PDMSB3_RS01925 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z7F8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PTH family.|||Cytoplasm|||Monomer.|||The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. http://togogenome.org/gene/2604047:PDMSB3_RS22675 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFX0 ^@ Cofactor ^@ Binds 4 [4Fe-4S] clusters per subunit. http://togogenome.org/gene/2604047:PDMSB3_RS21545 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZRR8 ^@ Similarity ^@ Belongs to the intradiol ring-cleavage dioxygenase family. http://togogenome.org/gene/2604047:PDMSB3_RS30875 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z3I8 ^@ Similarity ^@ Belongs to the ROK (NagC/XylR) family. http://togogenome.org/gene/2604047:PDMSB3_RS32210 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNN9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS18600 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJT6 ^@ Similarity ^@ Belongs to the glutamate synthase family. http://togogenome.org/gene/2604047:PDMSB3_RS32095 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z3M8 ^@ Function|||Similarity ^@ Belongs to the MsrA Met sulfoxide reductase family.|||Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. http://togogenome.org/gene/2604047:PDMSB3_RS07635 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCF9 ^@ Function|||Similarity|||Subunit ^@ A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD.|||Belongs to the RecD family.|||Heterotrimer of RecB, RecC and RecD. All subunits contribute to DNA-binding. http://togogenome.org/gene/2604047:PDMSB3_RS00685 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z5L4 ^@ Similarity ^@ Belongs to the SIMIBI class G3E GTPase family. ZNG1 subfamily. http://togogenome.org/gene/2604047:PDMSB3_RS17900 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWC2 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the CoaE family.|||Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS17245 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUC3 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS35725 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z3W2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS16035 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIN0 ^@ Similarity ^@ Belongs to the YggT family. http://togogenome.org/gene/2604047:PDMSB3_RS21180 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZM62 ^@ Similarity ^@ Belongs to the MbcT/ParT/Res family. http://togogenome.org/gene/2604047:PDMSB3_RS14495 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZI33 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.|||Cell inner membrane|||Cell membrane|||Membrane|||Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane. http://togogenome.org/gene/2604047:PDMSB3_RS25590 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZT98 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the UPF0060 family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS04615 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZB99 ^@ Similarity ^@ Belongs to the aldehyde dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS24435 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJF2 ^@ Similarity ^@ Belongs to the OsmC/Ohr family. http://togogenome.org/gene/2604047:PDMSB3_RS09900 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YT68 ^@ Similarity ^@ Belongs to the sigma-70 factor family. ECF subfamily. http://togogenome.org/gene/2604047:PDMSB3_RS17865 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUF4 ^@ Function|||Similarity|||Subunit ^@ Belongs to the bacterial ribosomal protein bL21 family.|||Part of the 50S ribosomal subunit. Contacts protein L20.|||This protein binds to 23S rRNA in the presence of protein L20. http://togogenome.org/gene/2604047:PDMSB3_RS09625 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZD55 ^@ Caution|||Function|||Similarity ^@ Belongs to the NAD(P)-dependent epimerase/dehydratase family. GDP-mannose 4,6-dehydratase subfamily.|||Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6-deoxy-D-mannose.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS24120 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBA8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the bacterial sugar transferase family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS03790 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z5V5 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS01140 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z795 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. http://togogenome.org/gene/2604047:PDMSB3_RS28315 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZMB1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS26680 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVZ1 ^@ Function|||Similarity|||Subunit ^@ Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.|||Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.|||The complex is composed of two ATP-binding proteins (PotA), two transmembrane proteins (PotB and PotC) and a solute-binding protein (PotD). http://togogenome.org/gene/2604047:PDMSB3_RS22975 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJR2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the peptidase S33 family.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS15610 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YU21 ^@ Function|||Similarity|||Subunit ^@ Belongs to the RNA polymerase subunit omega family.|||Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.|||The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription. http://togogenome.org/gene/2604047:PDMSB3_RS16245 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCF7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS28155 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZI51 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS19890 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKE7 ^@ Function|||Similarity ^@ Belongs to the ParB family.|||Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication. http://togogenome.org/gene/2604047:PDMSB3_RS29910 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZN17 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS28335 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZU42 ^@ Similarity ^@ Belongs to the UPF0502 family. http://togogenome.org/gene/2604047:PDMSB3_RS01995 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZA90 ^@ Function|||Similarity ^@ Belongs to the sigma-54 factor family.|||Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. http://togogenome.org/gene/2604047:PDMSB3_RS19575 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZH85 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the methyl-accepting chemotaxis (MCP) protein family.|||Cell inner membrane http://togogenome.org/gene/2604047:PDMSB3_RS13145 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2A0 ^@ Function|||Similarity ^@ A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.|||Belongs to the NifU family. http://togogenome.org/gene/2604047:PDMSB3_RS20270 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z941 ^@ Caution|||Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.|||Binds 1 potassium ion per subunit.|||Cytoplasm|||Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.|||Homodimer. Heterotetramer of two MnmE and two MnmG subunits.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS16565 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YW68 ^@ Caution|||Cofactor|||Function|||PTM|||Similarity|||Subunit ^@ Belongs to the peroxidase family. Peroxidase/catalase subfamily.|||Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity.|||Binds 1 heme b (iron(II)-protoporphyrin IX) group per dimer.|||Formation of the three residue Trp-Tyr-Met cross-link is important for the catalase, but not the peroxidase activity of the enzyme.|||Homodimer or homotetramer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS01005 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z9W8 ^@ Cofactor|||Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the SIS family. GmhA subfamily.|||Binds 1 zinc ion per subunit.|||Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.|||Cytoplasm|||Homotetramer.|||The reaction produces a racemic mixture of D-glycero-alpha-D-manno-heptose 7-phosphate and D-glycero-beta-D-manno-heptose 7-phosphate. http://togogenome.org/gene/2604047:PDMSB3_RS19355 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZK50 ^@ Similarity|||Subcellular Location Annotation ^@ Bacterial flagellum basal body|||Belongs to the FliE family. http://togogenome.org/gene/2604047:PDMSB3_RS13550 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEW9 ^@ Similarity ^@ In the C-terminal section; belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. http://togogenome.org/gene/2604047:PDMSB3_RS14795 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZI83 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bL32 family. http://togogenome.org/gene/2604047:PDMSB3_RS00465 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z9Q3 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the phosphoenolpyruvate carboxykinase [GTP] family.|||Binds 1 Mn(2+) ion per subunit.|||Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle.|||Cytoplasm|||Monomer. http://togogenome.org/gene/2604047:PDMSB3_RS16960 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZG35 ^@ Similarity ^@ Belongs to the SAICAR synthetase family. http://togogenome.org/gene/2604047:PDMSB3_RS00485 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8G3 ^@ Similarity ^@ Belongs to the DprA/Smf family. http://togogenome.org/gene/2604047:PDMSB3_RS28005 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCP8 ^@ Similarity ^@ Belongs to the DapA family. http://togogenome.org/gene/2604047:PDMSB3_RS06380 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z658 ^@ Similarity ^@ Belongs to the UPF0423 family. http://togogenome.org/gene/2604047:PDMSB3_RS07725 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z6B9 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the RbfA family.|||Cytoplasm|||Monomer. Binds 30S ribosomal subunits, but not 50S ribosomal subunits or 70S ribosomes.|||One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. http://togogenome.org/gene/2604047:PDMSB3_RS18025 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJI8 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the COQ7 family.|||Binds 2 iron ions per subunit.|||Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol during ubiquinone biosynthesis.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS01945 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZA85 ^@ Function|||Similarity ^@ Belongs to the GHMP kinase family. IspE subfamily.|||Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. http://togogenome.org/gene/2604047:PDMSB3_RS35155 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZL93 ^@ Cofactor ^@ Binds 1 Fe(2+) ion per subunit. http://togogenome.org/gene/2604047:PDMSB3_RS15400 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YW22 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family. Adenine deaminase type 2 subfamily.|||Binds 1 zinc ion per subunit.|||Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism. http://togogenome.org/gene/2604047:PDMSB3_RS18825 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2M0 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS3 family.|||Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation.|||Part of the 30S ribosomal subunit. Forms a tight complex with proteins S10 and S14. http://togogenome.org/gene/2604047:PDMSB3_RS01615 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZA43 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.|||Cell membrane|||Membrane|||Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate across the membrane. http://togogenome.org/gene/2604047:PDMSB3_RS09425 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z9Y5 ^@ Cofactor|||Similarity ^@ Belongs to the MsrB Met sulfoxide reductase family.|||Binds 1 zinc ion per subunit. The zinc ion is important for the structural integrity of the protein. http://togogenome.org/gene/2604047:PDMSB3_RS27890 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YW42 ^@ Similarity ^@ Belongs to the adrenodoxin/putidaredoxin family. http://togogenome.org/gene/2604047:PDMSB3_RS00645 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YU48 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the acetylglutamate kinase family. ArgB subfamily.|||Catalyzes the ATP-dependent phosphorylation of N-acetyl-L-glutamate.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS13355 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBD4 ^@ Function|||Similarity ^@ Belongs to the Fe(2+)-trafficking protein family.|||Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. http://togogenome.org/gene/2604047:PDMSB3_RS07500 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YSY1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the MscS (TC 1.A.23) family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS34625 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPI4 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS28230 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCT0 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS27855 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCM9 ^@ Function|||Subunit ^@ Interacts with sigma-54.|||Required for activation of most nif operons, which are directly involved in nitrogen fixation. http://togogenome.org/gene/2604047:PDMSB3_RS07295 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZC81 ^@ Similarity ^@ In the C-terminal section; belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. http://togogenome.org/gene/2604047:PDMSB3_RS20655 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZF31 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.|||Cytoplasm|||Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. http://togogenome.org/gene/2604047:PDMSB3_RS01810 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z5P8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the nlpA lipoprotein family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS32905 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEH9 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS23445 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z317 ^@ Activity Regulation|||Caution|||Cofactor|||Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ A peripheral cell membrane enzyme that catalyzes the oxidative decarboxylation of pyruvate to form acetate and CO(2). It channels electrons from the cytoplasm to the respiratory chain at the cell membrane via ubiquinone.|||Belongs to the TPP enzyme family.|||Binds 1 FAD per subunit.|||Binds 1 Mg(2+) ion per subunit.|||Binds 1 thiamine pyrophosphate per subunit.|||Cell membrane|||Has 4 domains; the Pyr domain which binds the pyrimidine moiety of the thiamine pyrophosphate cofactor, the FAD-binding domain, the PP-binding domain which binds the pyrophosphate portion of thiamine pyrophosphate and the C-terminal membrane binding region. The C-terminus is held closely against the rest of the protein and covers the active site; during activation it unfolds from the rest of the protein and forms an amphipathic helix upon membrane binding, exposing the active site.|||Homotetramer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||The C-terminus inhibits activity; it has to move for the enzyme to be active. Activated by lipid-binding, which occurs via the C-terminus. http://togogenome.org/gene/2604047:PDMSB3_RS13300 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z793 ^@ Function|||Subcellular Location Annotation ^@ Cytoplasm|||Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. http://togogenome.org/gene/2604047:PDMSB3_RS34565 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z3T7 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the thioester dehydratase family. FabZ subfamily.|||Cytoplasm|||Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. http://togogenome.org/gene/2604047:PDMSB3_RS14180 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZE00 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS07215 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZC68 ^@ Function|||Similarity ^@ Belongs to the aldehyde dehydrogenase family. AstD subfamily.|||Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. http://togogenome.org/gene/2604047:PDMSB3_RS23075 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZN07 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the ribulose-phosphate 3-epimerase family.|||Binds 1 divalent metal cation per subunit.|||Catalyzes the reversible epimerization of D-ribulose 5-phosphate to D-xylulose 5-phosphate. http://togogenome.org/gene/2604047:PDMSB3_RS03155 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z1M9 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS23670 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YXB3 ^@ Similarity ^@ Belongs to the bacterial ring-hydroxylating dioxygenase beta subunit family. http://togogenome.org/gene/2604047:PDMSB3_RS00630 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z5L2 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the AB hydrolase superfamily. MetX family.|||Cytoplasm|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine. http://togogenome.org/gene/2604047:PDMSB3_RS11515 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZE31 ^@ Similarity ^@ Belongs to the universal stress protein A family. http://togogenome.org/gene/2604047:PDMSB3_RS18175 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZD50 ^@ Similarity ^@ Belongs to the UbiH/COQ6 family. http://togogenome.org/gene/2604047:PDMSB3_RS11925 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZE84 ^@ Activity Regulation|||Caution|||Domain|||Function|||Similarity ^@ Belongs to the GlnD family.|||Has four distinct domains: an N-terminal nucleotidyltransferase (NT) domain responsible for UTase activity, a central HD domain that encodes UR activity, and two C-terminal ACT domains that seem to have a role in glutamine sensing.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.|||Uridylyltransferase (UTase) activity is inhibited by glutamine, while glutamine activates uridylyl-removing (UR) activity. http://togogenome.org/gene/2604047:PDMSB3_RS21365 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJ18 ^@ Cofactor|||Domain|||Function|||Similarity|||Subunit ^@ Belongs to the DnaG primase family.|||Binds 1 zinc ion per monomer.|||Contains an N-terminal zinc-binding domain, a central core domain that contains the primase activity, and a C-terminal DnaB-binding domain.|||Monomer. Interacts with DnaB.|||RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. http://togogenome.org/gene/2604047:PDMSB3_RS00120 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YV01 ^@ Similarity ^@ Belongs to the IS21/IS1162 putative ATP-binding protein family. http://togogenome.org/gene/2604047:PDMSB3_RS16590 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIW2 ^@ Function|||Similarity ^@ Belongs to the LpxK family.|||Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). http://togogenome.org/gene/2604047:PDMSB3_RS02155 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCS8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the methyl-accepting chemotaxis (MCP) protein family.|||Cell inner membrane http://togogenome.org/gene/2604047:PDMSB3_RS01680 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUB5 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the PEP-utilizing enzyme family.|||Cytoplasm|||General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr). http://togogenome.org/gene/2604047:PDMSB3_RS24335 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVN6 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. http://togogenome.org/gene/2604047:PDMSB3_RS30775 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YY84 ^@ Similarity ^@ Belongs to the extradiol ring-cleavage dioxygenase family. http://togogenome.org/gene/2604047:PDMSB3_RS25745 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBW2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the MgtC/SapB family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS10295 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZLM8 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS24960 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKL9 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS18435 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZD80 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the UPF0056 (MarC) family.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS35425 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZW63 ^@ Function|||Miscellaneous|||Similarity ^@ Belongs to the L-aspartate dehydrogenase family.|||Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate.|||The iminoaspartate product is unstable in aqueous solution and can decompose to oxaloacetate and ammonia. http://togogenome.org/gene/2604047:PDMSB3_RS30645 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z3I2 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS18775 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDC8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL18 family.|||Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S and 23S rRNAs.|||This is one of the proteins that bind and probably mediate the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. http://togogenome.org/gene/2604047:PDMSB3_RS29050 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z3D7 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS19625 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZQ83 ^@ Caution|||Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Aquaporins contain two tandem repeats each containing three membrane-spanning domains and a pore-forming loop with the signature motif Asn-Pro-Ala (NPA).|||Belongs to the MIP/aquaporin (TC 1.A.8) family.|||Cell membrane|||Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity.|||Homotetramer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS16470 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZP52 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the NiCoT transporter (TC 2.A.52) family.|||Cell membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS13200 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZER4 ^@ Cofactor|||Miscellaneous|||Similarity ^@ Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.|||Binds 1 FAD per subunit.|||The active site is a redox-active disulfide bond. http://togogenome.org/gene/2604047:PDMSB3_RS20215 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKJ6 ^@ Function ^@ Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). http://togogenome.org/gene/2604047:PDMSB3_RS33430 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YYK0 ^@ Function|||Similarity ^@ Belongs to the cyanase family.|||Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide. http://togogenome.org/gene/2604047:PDMSB3_RS16460 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIU2 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.|||Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS14780 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YTW1 ^@ Similarity ^@ Belongs to the fabD family. http://togogenome.org/gene/2604047:PDMSB3_RS13160 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEJ0 ^@ Similarity ^@ Belongs to the low molecular weight phosphotyrosine protein phosphatase family. http://togogenome.org/gene/2604047:PDMSB3_RS05285 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8F9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS33505 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZP49 ^@ Cofactor|||Similarity ^@ Belongs to the monomeric-type IDH family.|||Binds 1 Mg(2+) or Mn(2+) ion per subunit. http://togogenome.org/gene/2604047:PDMSB3_RS18810 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPX9 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS17 family.|||One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.|||Part of the 30S ribosomal subunit. http://togogenome.org/gene/2604047:PDMSB3_RS03230 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z9C9 ^@ Cofactor ^@ Binds 1 Mg(2+) ion per subunit. http://togogenome.org/gene/2604047:PDMSB3_RS17165 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZG57 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the UPF0073 (Hly-III) family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS10660 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGF6 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS06095 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAF1 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I 23 kDa subunit family.|||Binds 2 [4Fe-4S] clusters per subunit.|||Cell membrane|||NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/2604047:PDMSB3_RS18805 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8M7 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL14 family.|||Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome.|||Part of the 50S ribosomal subunit. Forms a cluster with proteins L3 and L19. In the 70S ribosome, L14 and L19 interact and together make contacts with the 16S rRNA in bridges B5 and B8. http://togogenome.org/gene/2604047:PDMSB3_RS17530 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGK5 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the LptE lipoprotein family.|||Cell outer membrane|||Component of the lipopolysaccharide transport and assembly complex. Interacts with LptD.|||Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane. http://togogenome.org/gene/2604047:PDMSB3_RS18280 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8H1 ^@ Subcellular Location Annotation ^@ Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS27110 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCD8 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the SHMT family.|||Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.|||Cytoplasm|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS17515 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCW9 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the HemJ family.|||Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.|||Catalyzes the oxidation of protoporphyrinogen IX to protoporphyrin IX.|||Cell membrane|||Homodimer.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS08685 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFH3 ^@ Function|||Similarity ^@ Belongs to the bacterial ribosomal protein bL9 family.|||Binds to the 23S rRNA. http://togogenome.org/gene/2604047:PDMSB3_RS15210 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2E4 ^@ Function|||Similarity ^@ Belongs to the bacterial ribosomal protein bS1 family.|||Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. http://togogenome.org/gene/2604047:PDMSB3_RS15855 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNX6 ^@ Similarity ^@ Belongs to the NtaA/SnaA/DszA monooxygenase family. http://togogenome.org/gene/2604047:PDMSB3_RS23040 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIQ4 ^@ Caution|||Cofactor|||Function|||Miscellaneous|||Similarity|||Subunit ^@ Belongs to the RuBisCO large chain family. Type I subfamily.|||Binds 1 Mg(2+) ion per subunit.|||Heterohexadecamer of 8 large chains and 8 small chains.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site.|||The basic functional RuBisCO is composed of a large chain homodimer in a 'head-to-tail' conformation. In form I RuBisCO this homodimer is arranged in a barrel-like tetramer with the small subunits forming a tetrameric 'cap' on each end of the 'barrel'. http://togogenome.org/gene/2604047:PDMSB3_RS26920 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZTR3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the heme-copper respiratory oxidase family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS19830 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUQ1 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the uroporphyrinogen decarboxylase family.|||Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.|||Cytoplasm|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS20570 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YV63 ^@ Similarity ^@ Belongs to the mandelate racemase/muconate lactonizing enzyme family. GlucD subfamily. http://togogenome.org/gene/2604047:PDMSB3_RS22120 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIC7 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS02415 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z7K1 ^@ Similarity ^@ Belongs to the acyl coenzyme A hydrolase family. http://togogenome.org/gene/2604047:PDMSB3_RS15570 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZFI5 ^@ Subcellular Location Annotation ^@ Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS00970 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z5M3 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS09665 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YT57 ^@ Similarity ^@ Belongs to the UDPGP type 2 family. http://togogenome.org/gene/2604047:PDMSB3_RS32830 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z3P9 ^@ Similarity ^@ Belongs to the 3-oxoacid CoA-transferase subunit B family. http://togogenome.org/gene/2604047:PDMSB3_RS32665 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZRQ7 ^@ Similarity ^@ Belongs to the FGGY kinase family. http://togogenome.org/gene/2604047:PDMSB3_RS21150 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YX08 ^@ Similarity ^@ Belongs to the glycosyl hydrolase 13 family. http://togogenome.org/gene/2604047:PDMSB3_RS09445 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZD29 ^@ Similarity ^@ Belongs to the thiolase-like superfamily. Thiolase family. http://togogenome.org/gene/2604047:PDMSB3_RS17860 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2K0 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bL27 family. http://togogenome.org/gene/2604047:PDMSB3_RS13625 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVU9 ^@ Caution|||Similarity ^@ Belongs to the UPF0391 family.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS14800 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z7L0 ^@ Function|||Similarity ^@ Belongs to the DUF177 domain family.|||Plays a role in synthesis, processing and/or stability of 23S rRNA. http://togogenome.org/gene/2604047:PDMSB3_RS02530 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZCX1 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the PNT beta subunit family.|||Cell inner membrane|||Membrane|||The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane. http://togogenome.org/gene/2604047:PDMSB3_RS02935 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z7P7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TolB family.|||Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.|||Periplasm|||The Tol-Pal system is composed of five core proteins: the inner membrane proteins TolA, TolQ and TolR, the periplasmic protein TolB and the outer membrane protein Pal. They form a network linking the inner and outer membranes and the peptidoglycan layer. http://togogenome.org/gene/2604047:PDMSB3_RS35260 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z3V2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS01540 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z5P0 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS16380 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZEW0 ^@ Caution|||Similarity ^@ Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS27640 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZM07 ^@ Similarity ^@ Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. http://togogenome.org/gene/2604047:PDMSB3_RS02770 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z5S6 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PanB family.|||Binds 1 Mg(2+) ion per subunit.|||Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate.|||Cytoplasm|||Homodecamer; pentamer of dimers. http://togogenome.org/gene/2604047:PDMSB3_RS09735 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZLE5 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS05250 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YSR8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS01840 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YSG9 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS27850 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZPY8 ^@ Function|||Similarity ^@ Belongs to the radical SAM superfamily. NifB family.|||Involved in the biosynthesis of the iron-molybdenum cofactor (FeMo-co or M-cluster) found in the dinitrogenase enzyme of the nitrogenase complex in nitrogen-fixing microorganisms. NifB catalyzes the crucial step of radical SAM-dependent carbide insertion that occurs concomitant with the insertion of a 9th sulfur and the rearrangement/coupling of two [4Fe-4S] clusters into a [8Fe-9S-C] cluster, the precursor to the M-cluster. http://togogenome.org/gene/2604047:PDMSB3_RS04050 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YSN4 ^@ Subcellular Location Annotation ^@ Cell inner membrane|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS17915 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YUF7 ^@ Similarity ^@ Belongs to the Nudix hydrolase family. http://togogenome.org/gene/2604047:PDMSB3_RS19165 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZQ21 ^@ Caution|||Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Binds 1 Mg(2+) ion per subunit.|||Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain.|||Cytoplasm|||Homotrimer.|||In the C-terminal section; belongs to the transferase hexapeptide repeat family.|||In the N-terminal section; belongs to the N-acetylglucosamine-1-phosphate uridyltransferase family.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS12180 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZH26 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily. http://togogenome.org/gene/2604047:PDMSB3_RS21245 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YX11 ^@ Cofactor|||Similarity ^@ Belongs to the DNA photolyase family.|||Binds 1 FAD per subunit. http://togogenome.org/gene/2604047:PDMSB3_RS19585 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z8W3 ^@ Function ^@ Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheA is autophosphorylated; it can transfer its phosphate group to either CheB or CheY. http://togogenome.org/gene/2604047:PDMSB3_RS18820 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWG1 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL16 family.|||Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs.|||Part of the 50S ribosomal subunit. http://togogenome.org/gene/2604047:PDMSB3_RS21895 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZMI4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS14680 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z2D3 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the elongation factor P family.|||Cytoplasm|||Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. http://togogenome.org/gene/2604047:PDMSB3_RS19550 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZG66 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the CheZ family.|||Cytoplasm|||Homodimer.|||Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). http://togogenome.org/gene/2604047:PDMSB3_RS17925 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGH0 ^@ Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ArgJ family.|||Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate.|||Cytoplasm|||Heterotetramer of two alpha and two beta chains.|||Some bacteria possess a monofunctional ArgJ, i.e., capable of catalyzing only the fifth step of the arginine biosynthetic pathway. http://togogenome.org/gene/2604047:PDMSB3_RS26980 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZKI5 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS17820 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGP2 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the GTP-binding SRP family. SRP54 subfamily.|||Composed of three domains: the N-terminal N domain, which is responsible for interactions with the ribosome, the central G domain, which binds GTP, and the C-terminal M domain, which binds the RNA and the signal sequence of the RNC.|||Cytoplasm|||Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.|||Part of the signal recognition particle protein translocation system, which is composed of SRP and FtsY. SRP is a ribonucleoprotein composed of Ffh and a 4.5S RNA molecule. http://togogenome.org/gene/2604047:PDMSB3_RS32485 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZRN3 ^@ Similarity ^@ Belongs to the outer membrane factor (OMF) (TC 1.B.17) family. http://togogenome.org/gene/2604047:PDMSB3_RS26025 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZBZ7 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS21025 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZJ39 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the aconitase/IPM isomerase family. LeuC type 1 subfamily.|||Binds 1 [4Fe-4S] cluster per subunit.|||Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate.|||Heterodimer of LeuC and LeuD. http://togogenome.org/gene/2604047:PDMSB3_RS07745 ^@ http://purl.uniprot.org/uniprot/A0A5Q4Z9C6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.|||Cell membrane http://togogenome.org/gene/2604047:PDMSB3_RS19760 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZQA3 ^@ Function|||Similarity|||Subunit ^@ Belongs to the helicase family. UvrD subfamily.|||Homodimer.|||Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction. http://togogenome.org/gene/2604047:PDMSB3_RS18255 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YWD7 ^@ Function|||Similarity ^@ Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.|||Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif. http://togogenome.org/gene/2604047:PDMSB3_RS10865 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDN0 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/2604047:PDMSB3_RS28340 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZL22 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the calycin superfamily. Lipocalin family.|||Cell outer membrane|||Homodimer.|||Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids. http://togogenome.org/gene/2604047:PDMSB3_RS28960 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YW93 ^@ Function|||Similarity ^@ Belongs to the catalase family. HPII subfamily.|||Serves to protect cells from the toxic effects of hydrogen peroxide. http://togogenome.org/gene/2604047:PDMSB3_RS11500 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZAP0 ^@ Caution|||Function|||PTM|||Similarity ^@ Acetylated. Deacetylation by the SIR2-homolog deacetylase activates the enzyme.|||Belongs to the ATP-dependent AMP-binding enzyme family.|||Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/2604047:PDMSB3_RS11715 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZGW0 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/2604047:PDMSB3_RS11220 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZDZ7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.|||Membrane http://togogenome.org/gene/2604047:PDMSB3_RS16365 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIS8 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the quinolinate synthase family. Type 1 subfamily.|||Binds 1 [4Fe-4S] cluster per subunit.|||Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.|||Cytoplasm http://togogenome.org/gene/2604047:PDMSB3_RS02685 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIH3 ^@ Similarity ^@ Belongs to the Cob(I)alamin adenosyltransferase family. http://togogenome.org/gene/2604047:PDMSB3_RS30750 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZNE8 ^@ Similarity ^@ Belongs to the peptidase A24 family. http://togogenome.org/gene/2604047:PDMSB3_RS26330 ^@ http://purl.uniprot.org/uniprot/A0A5Q4YVX4 ^@ Similarity ^@ Belongs to the zinc-containing alcohol dehydrogenase family. http://togogenome.org/gene/2604047:PDMSB3_RS12070 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZE44 ^@ Similarity ^@ Belongs to the DEAD box helicase family. http://togogenome.org/gene/2604047:PDMSB3_RS02635 ^@ http://purl.uniprot.org/uniprot/A0A5Q4ZIG8 ^@ Similarity ^@ Belongs to the catalase family.