http://togogenome.org/gene/4538:GN06_pgp069 ^@ http://purl.uniprot.org/uniprot/A0A059UAS2 ^@ Similarity ^@ Belongs to the universal ribosomal protein uL2 family. http://togogenome.org/gene/4538:GN06_p1 ^@ http://purl.uniprot.org/uniprot/A0A059UFQ6 ^@ Similarity ^@ Belongs to the universal ribosomal protein uS19 family. http://togogenome.org/gene/4538:GN06_pgp054 ^@ http://purl.uniprot.org/uniprot/A0A059UFN5 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the PsbT family.|||Cellular thylakoid membrane|||Seems to play a role in the dimerization of PSII.|||chloroplast thylakoid membrane http://togogenome.org/gene/4538:GN06_pgp048 ^@ http://purl.uniprot.org/uniprot/D2SYQ9 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the PsaJ family.|||Cellular thylakoid membrane|||May help in the organization of the PsaE and PsaF subunits.|||Membrane http://togogenome.org/gene/4538:GN06_pgp001 ^@ http://purl.uniprot.org/uniprot/A0A059UF67 ^@ Similarity ^@ Belongs to the universal ribosomal protein uS12 family. http://togogenome.org/gene/4538:GN06_pgp104 ^@ http://purl.uniprot.org/uniprot/I1Q4K3 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I subunit 2 family.|||Cell membrane|||Membrane|||NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/4538:GN06_pgp004 ^@ http://purl.uniprot.org/uniprot/A0A059UBV2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the bacterial ribosomal protein bS16 family.|||chloroplast http://togogenome.org/gene/4538:GN06_pgp092 ^@ http://purl.uniprot.org/uniprot/I1QKY4 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I 23 kDa subunit family.|||Binds 2 [4Fe-4S] clusters per subunit.|||Cell membrane|||NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/4538:GN06_pgp028 ^@ http://purl.uniprot.org/uniprot/I1Q5K8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I 30 kDa subunit family.|||Cell membrane|||Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.|||NDH-1 is composed of 14 different subunits. Subunits NuoB, C, D, E, F, and G constitute the peripheral sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/4538:GN06_pgp013 ^@ http://purl.uniprot.org/uniprot/A0A059U6J9 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PsbM family.|||Cellular thylakoid membrane|||Membrane|||One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface.|||PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes. http://togogenome.org/gene/4538:GN06_pgp108 ^@ http://purl.uniprot.org/uniprot/I1QWQ5 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL23 family.|||Binds to 23S rRNA.|||Part of the 50S ribosomal subunit. http://togogenome.org/gene/4538:GN06_pgp032 ^@ http://purl.uniprot.org/uniprot/A0A059UBX0 ^@ Function|||Similarity|||Subunit ^@ Belongs to the ATPase alpha/beta chains family.|||F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has four main subunits: a(1), b(1), b'(1) and c(9-12).|||Produces ATP from ADP in the presence of a proton gradient across the membrane. http://togogenome.org/gene/4538:GN06_pgp103 ^@ http://purl.uniprot.org/uniprot/I1Q659 ^@ Similarity ^@ Belongs to the universal ribosomal protein uS7 family. http://togogenome.org/gene/4538:GN06_pgp063 ^@ http://purl.uniprot.org/uniprot/I1Q5Q7 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS8 family.|||One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.|||Part of the 30S ribosomal subunit. http://togogenome.org/gene/4538:GN06_pgp093 ^@ http://purl.uniprot.org/uniprot/I1QWL7 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I subunit 1 family.|||Cell membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane|||NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. http://togogenome.org/gene/4538:GN06_pgp049 ^@ http://purl.uniprot.org/uniprot/I1R2C9 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bL33 family. http://togogenome.org/gene/4538:GN06_pgp112 ^@ http://purl.uniprot.org/uniprot/A0A059UFQ6 ^@ Similarity ^@ Belongs to the universal ribosomal protein uS19 family. http://togogenome.org/gene/4538:GN06_pgp071 ^@ http://purl.uniprot.org/uniprot/I1QWQ5 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL23 family.|||Binds to 23S rRNA.|||Part of the 50S ribosomal subunit. http://togogenome.org/gene/4538:GN06_pgp087 ^@ http://purl.uniprot.org/uniprot/I1Q6E8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the CcmF/CycK/Ccl1/NrfE/CcsA family.|||Cellular thylakoid membrane|||May interact with Ccs1.|||Membrane|||Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment. http://togogenome.org/gene/4538:GN06_pgp051 ^@ http://purl.uniprot.org/uniprot/I1Q5I6 ^@ Function|||Similarity ^@ Belongs to the bacterial ribosomal protein bL20 family.|||Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. http://togogenome.org/gene/4538:GN06_pgp043 ^@ http://purl.uniprot.org/uniprot/A0A059UAN3 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PsbL family.|||Cellular thylakoid membrane|||Membrane|||One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface and is required for correct PSII assembly and/or dimerization.|||PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes. http://togogenome.org/gene/4538:GN06_pgp056 ^@ http://purl.uniprot.org/uniprot/A0A059UBY5 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PsbH family.|||Cellular thylakoid membrane|||Membrane|||One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.|||PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, numerous small proteins, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.|||chloroplast thylakoid membrane http://togogenome.org/gene/4538:GN06_pgp027 ^@ http://purl.uniprot.org/uniprot/I1Q1X7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the universal ribosomal protein uS4 family.|||One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.|||Part of the 30S ribosomal subunit. Contacts protein S5. The interaction surface between S4 and S5 is involved in control of translational fidelity.|||With S5 and S12 plays an important role in translational accuracy.|||chloroplast http://togogenome.org/gene/4538:GN06_pgp058 ^@ http://purl.uniprot.org/uniprot/A0A059UAP5 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the cytochrome b family. PetD subfamily.|||Cellular thylakoid membrane|||Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.|||Membrane|||The 4 large subunits of the cytochrome b6-f complex are cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are PetG, PetL, PetM and PetN. The complex functions as a dimer. http://togogenome.org/gene/4538:GN06_pgp009 ^@ http://purl.uniprot.org/uniprot/I1PHW8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PsbB/PsbC family. PsbC subfamily.|||Cellular thylakoid membrane|||Membrane|||One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation.|||PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes. http://togogenome.org/gene/4538:GN06_pgp042 ^@ http://purl.uniprot.org/uniprot/A0A059U6L7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PsbJ family.|||Cellular thylakoid membrane|||One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.|||PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes. http://togogenome.org/gene/4538:GN06_pgp067 ^@ http://purl.uniprot.org/uniprot/D2SYG2 ^@ Similarity ^@ Belongs to the universal ribosomal protein uL22 family. http://togogenome.org/gene/4538:GN06_pgp010 ^@ http://purl.uniprot.org/uniprot/D2E545 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the PsbZ family.|||Cellular thylakoid membrane|||Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna. http://togogenome.org/gene/4538:GN06_pgp026 ^@ http://purl.uniprot.org/uniprot/A0A059UF13 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the Ycf3 family.|||Cellular thylakoid membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Seems to be required for the assembly of the photosystem I complex. http://togogenome.org/gene/4538:GN06_pgp046 ^@ http://purl.uniprot.org/uniprot/A0A059UBX8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PetL family.|||Cellular thylakoid membrane|||Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. PetL is important for photoautotrophic growth as well as for electron transfer efficiency and stability of the cytochrome b6-f complex.|||Membrane|||The 4 large subunits of the cytochrome b6-f complex are cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are PetG, PetL, PetM and PetN. The complex functions as a dimer. http://togogenome.org/gene/4538:GN06_pgp041 ^@ http://purl.uniprot.org/uniprot/I1PHZ3 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the cytochrome f family.|||Binds 1 heme group covalently.|||Cellular thylakoid membrane|||Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.|||Membrane|||The 4 large subunits of the cytochrome b6-f complex are cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are PetG, PetL, PetM and PetN. The complex functions as a dimer.|||chloroplast thylakoid membrane http://togogenome.org/gene/4538:GN06_pgp090 ^@ http://purl.uniprot.org/uniprot/I1QWL4 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I subunit 4L family.|||Cell membrane|||Membrane|||NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/4538:GN06_pgp088 ^@ http://purl.uniprot.org/uniprot/I1Q6E9 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the complex I subunit 4 family.|||Cellular thylakoid membrane|||Membrane|||NDH-1 shuttles electrons from NAD(P)H, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/4538:GN06_pgp033 ^@ http://purl.uniprot.org/uniprot/A0A059U6L3 ^@ Cofactor|||Function|||Miscellaneous|||PTM|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the RuBisCO large chain family. Type I subfamily.|||Binds 1 Mg(2+) ion per subunit.|||Heterohexadecamer of 8 large chains and 8 small chains; disulfide-linked. The disulfide link is formed within the large subunit homodimers.|||RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site.|||The basic functional RuBisCO is composed of a large chain homodimer in a 'head-to-tail' conformation. In form I RuBisCO this homodimer is arranged in a barrel-like tetramer with the small subunits forming a tetrameric 'cap' on each end of the 'barrel'.|||The disulfide bond which can form in the large chain dimeric partners within the hexadecamer appears to be associated with oxidative stress and protein turnover.|||chloroplast http://togogenome.org/gene/4538:GN06_pgp075 ^@ http://purl.uniprot.org/uniprot/I1Q4K3 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I subunit 2 family.|||Cell membrane|||Membrane|||NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/4538:GN06_pgp037 ^@ http://purl.uniprot.org/uniprot/A0A059UAM8 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the PsaI family.|||Cellular thylakoid membrane|||May help in the organization of the PsaL subunit.|||Membrane|||chloroplast thylakoid membrane http://togogenome.org/gene/4538:GN06_pgp005 ^@ http://purl.uniprot.org/uniprot/A0A059U6J5 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/4538:GN06_pgp095 ^@ http://purl.uniprot.org/uniprot/I1R2H1 ^@ Similarity ^@ Belongs to the universal ribosomal protein uS15 family. http://togogenome.org/gene/4538:GN06_pgp091 ^@ http://purl.uniprot.org/uniprot/I1PHU7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the complex I subunit 6 family.|||Membrane http://togogenome.org/gene/4538:GN06_pgp024 ^@ http://purl.uniprot.org/uniprot/I1R2E3 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PsaA/PsaB family.|||Cellular thylakoid membrane|||Membrane|||PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin.|||The PsaA/B heterodimer binds the P700 chlorophyll special pair and subsequent electron acceptors. PSI consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The eukaryotic PSI reaction center is composed of at least 11 subunits. http://togogenome.org/gene/4538:GN06_pgp016 ^@ http://purl.uniprot.org/uniprot/I1QWH8 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the RNA polymerase beta' chain family. RpoC1 subfamily.|||Binds 1 Mg(2+) ion per subunit.|||Binds 1 Zn(2+) ion per subunit.|||DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. http://togogenome.org/gene/4538:GN06_pgp065 ^@ http://purl.uniprot.org/uniprot/A0A059UF44 ^@ Similarity ^@ Belongs to the universal ribosomal protein uL16 family. http://togogenome.org/gene/4538:GN06_pgp023 ^@ http://purl.uniprot.org/uniprot/I1Q644 ^@ Similarity ^@ Belongs to the universal ribosomal protein uS14 family. http://togogenome.org/gene/4538:GN06_pgp030 ^@ http://purl.uniprot.org/uniprot/I1QKU8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I subunit 3 family.|||Cell membrane|||Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.|||Mitochondrion membrane|||NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/4538:GN06_pgp018 ^@ http://purl.uniprot.org/uniprot/I1QKT9 ^@ Similarity ^@ Belongs to the universal ribosomal protein uS2 family. http://togogenome.org/gene/4538:GN06_pgp045 ^@ http://purl.uniprot.org/uniprot/I1QKV4 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PsbE/PsbF family.|||Cellular thylakoid membrane|||Heterodimer of an alpha subunit and a beta subunit. PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.|||Membrane|||This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.|||With its partner (PsbF) binds heme. PSII binds additional chlorophylls, carotenoids and specific lipids.|||chloroplast thylakoid membrane http://togogenome.org/gene/4538:GN06_pgp085 ^@ http://purl.uniprot.org/uniprot/I1Q6E7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I subunit 5 family.|||Membrane|||NDH is composed of at least 16 different subunits, 5 of which are encoded in the nucleus.|||NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.|||chloroplast thylakoid membrane http://togogenome.org/gene/4538:GN06_pgp053 ^@ http://purl.uniprot.org/uniprot/I1QWF7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PsbB/PsbC family. PsbB subfamily.|||Cellular thylakoid membrane|||Membrane|||One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation.|||PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes. http://togogenome.org/gene/4538:GN06_pgp059 ^@ http://purl.uniprot.org/uniprot/A0A059UFN7 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the RNA polymerase alpha chain family.|||DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.|||Homodimer. The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.|||The N-terminal domain is essential for RNAP assembly and basal transcription, whereas the C-terminal domain is involved in interaction with transcriptional regulators and with upstream promoter elements.|||chloroplast http://togogenome.org/gene/4538:GN06_pgp066 ^@ http://purl.uniprot.org/uniprot/I1QWE9 ^@ Similarity ^@ Belongs to the universal ribosomal protein uS3 family. http://togogenome.org/gene/4538:GN06_pgp060 ^@ http://purl.uniprot.org/uniprot/A0A059UF39 ^@ Similarity ^@ Belongs to the universal ribosomal protein uS11 family. http://togogenome.org/gene/4538:GN06_pgp047 ^@ http://purl.uniprot.org/uniprot/A0A059U6L9 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PetG family.|||Cellular thylakoid membrane|||Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. PetG is required for either the stability or assembly of the cytochrome b6-f complex.|||Membrane|||The 4 large subunits of the cytochrome b6-f complex are cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are PetG, PetL, PetM and PetN. The complex functions as a dimer. http://togogenome.org/gene/4538:GN06_pgp050 ^@ http://purl.uniprot.org/uniprot/I1Q6D5 ^@ Similarity|||Subunit ^@ Belongs to the bacterial ribosomal protein bS18 family.|||Part of the 30S ribosomal subunit. http://togogenome.org/gene/4538:GN06_pgp089 ^@ http://purl.uniprot.org/uniprot/I1Q6F0 ^@ Cofactor|||Function|||Subcellular Location Annotation|||Subunit ^@ Apoprotein for the two 4Fe-4S centers FA and FB of photosystem I (PSI); essential for photochemical activity. FB is the terminal electron acceptor of PSI, donating electrons to ferredoxin. The C-terminus interacts with PsaA/B/D and helps assemble the protein into the PSI complex. Required for binding of PsaD and PsaE to PSI. PSI is a plastocyanin-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn.|||Binds 2 [4Fe-4S] clusters. Cluster 2 is most probably the spectroscopically characterized electron acceptor FA and cluster 1 is most probably FB.|||Cellular thylakoid membrane|||The cyanobacterial PSI reaction center is composed of one copy each of PsaA,B,C,D,E,F,I,J,K,L,M and X, and forms trimeric complexes. http://togogenome.org/gene/4538:GN06_pgp044 ^@ http://purl.uniprot.org/uniprot/A0A059UFM7 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PsbE/PsbF family.|||Cellular thylakoid membrane|||Heterodimer of an alpha subunit and a beta subunit. PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.|||Membrane|||This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.|||With its partner (PsbE) binds heme. PSII binds additional chlorophylls, carotenoids and specific lipids.|||chloroplast thylakoid membrane http://togogenome.org/gene/4538:GN06_p2 ^@ http://purl.uniprot.org/uniprot/A0A059UF53 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the bacterial ribosomal protein bL32 family.|||chloroplast http://togogenome.org/gene/4538:GN06_pgp031 ^@ http://purl.uniprot.org/uniprot/A0A059UF16 ^@ Similarity ^@ Belongs to the ATPase epsilon chain family. http://togogenome.org/gene/4538:GN06_pgp029 ^@ http://purl.uniprot.org/uniprot/I1Q5K7 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I 20 kDa subunit family.|||Binds 1 [4Fe-4S] cluster.|||Cell membrane|||NDH-1 is composed of 14 different subunits. Subunits NuoB, C, D, E, F, and G constitute the peripheral sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/4538:GN06_pgp076 ^@ http://purl.uniprot.org/uniprot/I1Q659 ^@ Similarity ^@ Belongs to the universal ribosomal protein uS7 family. http://togogenome.org/gene/4538:GN06_pgp094 ^@ http://purl.uniprot.org/uniprot/I1Q6F5 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I 49 kDa subunit family.|||Cell membrane|||NDH-1 is composed of 14 different subunits. Subunits NuoB, C, D, E, F, and G constitute the peripheral sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/4538:GN06_pgp021 ^@ http://purl.uniprot.org/uniprot/I1QKU1 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the ATPase B chain family.|||F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.|||Membrane http://togogenome.org/gene/4538:GN06_pgp062 ^@ http://purl.uniprot.org/uniprot/A0A059U6M9 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the IF-1 family.|||Component of the 30S ribosomal translation pre-initiation complex which assembles on the 30S ribosome in the order IF-2 and IF-3, IF-1 and N-formylmethionyl-tRNA(fMet); mRNA recruitment can occur at any time during PIC assembly.|||Cytoplasm|||One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. http://togogenome.org/gene/4538:GN06_pgp014 ^@ http://purl.uniprot.org/uniprot/A0A059UAL1 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PetN family.|||Cellular thylakoid membrane|||Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.|||Membrane|||The 4 large subunits of the cytochrome b6-f complex are cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are PetG, PetL, PetM and PetN. The complex functions as a dimer. http://togogenome.org/gene/4538:GN06_pgp052 ^@ http://purl.uniprot.org/uniprot/I1Q6D3 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the peptidase S14 family.|||Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins.|||Component of the chloroplastic Clp protease core complex.|||Cytoplasm http://togogenome.org/gene/4538:GN06_pgp015 ^@ http://purl.uniprot.org/uniprot/I1R2F1 ^@ Function|||Similarity|||Subunit ^@ Belongs to the RNA polymerase beta chain family.|||DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.|||In plastids the minimal PEP RNA polymerase catalytic core is composed of four subunits: alpha, beta, beta', and beta''. When a (nuclear-encoded) sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.|||The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription. http://togogenome.org/gene/4538:GN06_pgp038 ^@ http://purl.uniprot.org/uniprot/I1Q1W9 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the Ycf4 family.|||Cellular thylakoid membrane|||Membrane|||Seems to be required for the assembly of the photosystem I complex. http://togogenome.org/gene/4538:GN06_pgp040 ^@ http://purl.uniprot.org/uniprot/I1PHZ2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the Cema family.|||Membrane http://togogenome.org/gene/4538:GN06_pgp083 ^@ http://purl.uniprot.org/uniprot/I1R2H1 ^@ Similarity ^@ Belongs to the universal ribosomal protein uS15 family. http://togogenome.org/gene/4538:GN06_pgp109 ^@ http://purl.uniprot.org/uniprot/A0A059UAS2 ^@ Similarity ^@ Belongs to the universal ribosomal protein uL2 family. http://togogenome.org/gene/4538:GN06_pgp025 ^@ http://purl.uniprot.org/uniprot/I1Q6B3 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PsaA/PsaB family.|||Cellular thylakoid membrane|||Membrane|||PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin.|||The PsaA/B heterodimer binds the P700 chlorophyll special pair and subsequent electron acceptors. PSI consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The eukaryotic PSI reaction center is composed of at least 11 subunits. http://togogenome.org/gene/4538:GN06_pgp019 ^@ http://purl.uniprot.org/uniprot/I1QWH6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ATPase A chain family.|||Membrane http://togogenome.org/gene/4538:GN06_pgp057 ^@ http://purl.uniprot.org/uniprot/A0A059U6M6 ^@ Cofactor|||Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the cytochrome b family. PetB subfamily.|||Binds 2 heme b groups non-covalently with two histidine residues as axial ligands.|||Binds one heme group covalently by a single cysteine link with no axial amino acid ligand. This heme was named heme ci.|||Cellular thylakoid membrane|||Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.|||Heme 1 (or BH or b566) is high-potential and absorbs at about 566 nm, and heme 2 (or BL or b562) is low-potential and absorbs at about 562 nm.|||Membrane|||The 4 large subunits of the cytochrome b6-f complex are cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are PetG, PetL, PetM and PetN. The complex functions as a dimer. http://togogenome.org/gene/4538:GN06_pgp064 ^@ http://purl.uniprot.org/uniprot/I1Q6C6 ^@ Similarity ^@ Belongs to the universal ribosomal protein uL14 family. http://togogenome.org/gene/4538:GN06_pgp003 ^@ http://purl.uniprot.org/uniprot/A0A059UEZ8 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the intron maturase 2 family. MatK subfamily.|||Usually encoded in the trnK tRNA gene intron. Probably assists in splicing its own and other chloroplast group II introns.|||chloroplast http://togogenome.org/gene/4538:GN06_pgp102 ^@ http://purl.uniprot.org/uniprot/A0A059UF67 ^@ Similarity ^@ Belongs to the universal ribosomal protein uS12 family. http://togogenome.org/gene/4538:GN06_pgp002 ^@ http://purl.uniprot.org/uniprot/I1PHW4 ^@ Function|||Miscellaneous|||PTM|||Similarity|||Subcellular Location Annotation|||Subunit ^@ 2 of the reaction center chlorophylls (ChlD1 and ChlD2) are entirely coordinated by water.|||Belongs to the reaction center PufL/M/PsbA/D family.|||C-terminally processed by CtpA; processing is essential to allow assembly of the oxygen-evolving complex and thus photosynthetic growth.|||Cellular thylakoid membrane|||Herbicides such as atrazine, BNT, diuron or ioxynil bind in the Q(B) binding site and block subsequent electron transfer.|||Membrane|||PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.|||Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbD) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors.|||Tyr-161 forms a radical intermediate that is referred to as redox-active TyrZ, YZ or Y-Z. http://togogenome.org/gene/4538:GN06_pgp020 ^@ http://purl.uniprot.org/uniprot/I1Q651 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the ATPase C chain family.|||Cell membrane|||F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.|||Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane http://togogenome.org/gene/4538:GN06_pgp006 ^@ http://purl.uniprot.org/uniprot/A0A059UAK7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PsbI family.|||Cellular thylakoid membrane|||Membrane|||One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.|||PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes. http://togogenome.org/gene/4538:GN06_pgp022 ^@ http://purl.uniprot.org/uniprot/I1Q643 ^@ Function|||Similarity|||Subunit ^@ Belongs to the ATPase alpha/beta chains family.|||F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.|||Produces ATP from ADP in the presence of a proton gradient across the membrane. http://togogenome.org/gene/4538:GN06_pgp008 ^@ http://purl.uniprot.org/uniprot/A0A059UFK7 ^@ Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation|||Subunit ^@ 2 of the reaction center chlorophylls (ChlD1 and ChlD2) are entirely coordinated by water.|||Belongs to the reaction center PufL/M/PsbA/D family.|||Cellular thylakoid membrane|||Membrane|||PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.|||Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbD) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex. http://togogenome.org/gene/4538:GN06_pgp055 ^@ http://purl.uniprot.org/uniprot/A0A059UF33 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the PsbN family.|||Cellular thylakoid membrane|||May play a role in photosystem I and II biogenesis.|||Membrane|||Originally thought to be a component of PSII; based on experiments in Synechocystis, N.tabacum and barley, and its absence from PSII in T.elongatus and T.vulcanus, this is probably not true. http://togogenome.org/gene/4538:GN06_pgp061 ^@ http://purl.uniprot.org/uniprot/A0A059UBY9 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bL36 family.